Miyakogusa Predicted Gene
- Lj5g3v0626540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0626540.1 Non Chatacterized Hit- tr|D8SL01|D8SL01_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.67,0.0000000000002,seg,NULL; coiled-coil,NULL,CUFF.53543.1
(354 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09730.1 | Symbols: | unknown protein; Has 1171 Blast hits t... 138 5e-33
AT3G09730.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 137 1e-32
>AT3G09730.1 | Symbols: | unknown protein; Has 1171 Blast hits to
1097 proteins in 212 species: Archae - 14; Bacteria -
83; Metazoa - 583; Fungi - 105; Plants - 149; Viruses -
14; Other Eukaryotes - 223 (source: NCBI BLink). |
chr3:2984018-2986260 FORWARD LENGTH=397
Length = 397
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 155/264 (58%), Gaps = 28/264 (10%)
Query: 96 NSLFSLGLSFGIMFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSSRAHE------ 149
+S FS L +M+MMSA K EI +L+ +ET K++QELK EL+R KS + +
Sbjct: 145 HSSFSSALGVCMMYMMSAEKGEISKLHAATEETTKVIQELKDELSRIKSLQGFKFRGCAA 204
Query: 150 NLDSVGNSDMNSRKMSGRHELMLTKTNSELRDSGECGSSTLTEESEPGVLEMDQLEAELE 209
+ + G D+N +M R L + N GE SS LTEE E +EM+QLE ELE
Sbjct: 205 SSEKSGQIDLNRSEMVSRVSLDIKSGND-----GEYASSVLTEEPEQEAVEMEQLEMELE 259
Query: 210 FELQKLSGCTIDSHRHEEIKPELEKLDSDGTDDWDFNYSQSHGVSASELNQKLSQLLIKQ 269
ELQKL+ S EE K + +G + + Q G+SASEL++KLS LLI+Q
Sbjct: 260 SELQKLN-LAETSDVMEECKDLV-----NGAESY-----QCGGISASELDKKLSHLLIEQ 308
Query: 270 QEDQITELESELHQAQSKLHEKEAELQALKDCVKRLTELSLSAVSDDE-----TQTL-IS 323
QE QI ELE+EL QSKL EKEAELQALK CV+RLTE L SDDE Q L +S
Sbjct: 309 QEGQINELEAELQTTQSKLQEKEAELQALKVCVRRLTEFPLLDRSDDEHEEDLNQDLSVS 368
Query: 324 DCDNNNAESKSKQSVLRAKRPLDS 347
+N + ++++ ++ KRP++S
Sbjct: 369 WSQHNKTDHEARKQIIGMKRPMES 392
>AT3G09730.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 18 plant
structures; EXPRESSED DURING: 9 growth stages. |
chr3:2984018-2986402 FORWARD LENGTH=405
Length = 405
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 154/263 (58%), Gaps = 28/263 (10%)
Query: 96 NSLFSLGLSFGIMFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSSRAHE------ 149
+S FS L +M+MMSA K EI +L+ +ET K++QELK EL+R KS + +
Sbjct: 145 HSSFSSALGVCMMYMMSAEKGEISKLHAATEETTKVIQELKDELSRIKSLQGFKFRGCAA 204
Query: 150 NLDSVGNSDMNSRKMSGRHELMLTKTNSELRDSGECGSSTLTEESEPGVLEMDQLEAELE 209
+ + G D+N +M R L + N GE SS LTEE E +EM+QLE ELE
Sbjct: 205 SSEKSGQIDLNRSEMVSRVSLDIKSGND-----GEYASSVLTEEPEQEAVEMEQLEMELE 259
Query: 210 FELQKLSGCTIDSHRHEEIKPELEKLDSDGTDDWDFNYSQSHGVSASELNQKLSQLLIKQ 269
ELQKL+ S EE K + +G + + Q G+SASEL++KLS LLI+Q
Sbjct: 260 SELQKLN-LAETSDVMEECKDLV-----NGAESY-----QCGGISASELDKKLSHLLIEQ 308
Query: 270 QEDQITELESELHQAQSKLHEKEAELQALKDCVKRLTELSLSAVSDDE-----TQTL-IS 323
QE QI ELE+EL QSKL EKEAELQALK CV+RLTE L SDDE Q L +S
Sbjct: 309 QEGQINELEAELQTTQSKLQEKEAELQALKVCVRRLTEFPLLDRSDDEHEEDLNQDLSVS 368
Query: 324 DCDNNNAESKSKQSVLRAKRPLD 346
+N + ++++ ++ KRP++
Sbjct: 369 WSQHNKTDHEARKQIIGMKRPME 391