Miyakogusa Predicted Gene
- Lj5g3v0616300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0616300.1 Non Chatacterized Hit- tr|I1L8R9|I1L8R9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54262
PE,76.58,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR_3,,CUFF.53523.1
(740 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 954 0.0
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 5e-36
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 3e-35
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 145 1e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 141 1e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 4e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 140 5e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 137 4e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 3e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 6e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 1e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 1e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-30
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 9e-30
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 7e-29
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-28
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 2e-27
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 119 1e-26
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 4e-26
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 7e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 111 1e-24
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 111 2e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 110 4e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 109 7e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 108 9e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 7e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 8e-23
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 101 2e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 99 1e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 99 2e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-19
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 8e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 89 2e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 87 4e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 5e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 84 3e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 5e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 8e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 76 1e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 75 1e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 75 2e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 73 8e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 9e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 73 9e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 72 1e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 7e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 69 1e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 69 1e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 67 3e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 67 5e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 6e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 65 1e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 4e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 64 5e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 63 8e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 8e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 1e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 1e-09
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 62 1e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 62 1e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 62 2e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 62 2e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 3e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 60 5e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 8e-09
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 59 9e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 59 1e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 6e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 5e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 52 2e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 50 5e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/699 (67%), Positives = 541/699 (77%), Gaps = 44/699 (6%)
Query: 65 DHKLLTLLQQRKTEEAWIAYTQCTHLPNPTCLSRLVSQLSYHNTLPSLTRAQSILTRLRN 124
D +LL LL+ RKT+EAW Y Q THLP PTCLSRLVSQLSY + SLTRAQSILTRLRN
Sbjct: 85 DQELLFLLRNRKTDEAWAKYVQSTHLPGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRN 144
Query: 125 ERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDS 184
ERQLHRLDANS TLYA SV+KSM+RSGYLPHVKAW+A V+ L++SGD
Sbjct: 145 ERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDD 204
Query: 185 --VEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQ 242
E++ LF A+TRR+++ D + SRPDT AFNAVLNACAN GD + +LF+EM +
Sbjct: 205 GPEESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSE 264
Query: 243 FGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDT 302
+ PD L+YN+++KLC R RK+L+VFVLERI+++ + +CMTT+HSLVAAYV FGDL T
Sbjct: 265 WDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRT 324
Query: 303 AEIIVQAMREKRRDLCRILRESN------------------------SEYIGGKNDS--- 335
AE IVQAMREKRRDLC++LRE N S Y S
Sbjct: 325 AERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEG 384
Query: 336 ---VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
VF+KLLPNS++ S +PPLLPK + P++RIYTTLMKGYMK+GRV+DT RM
Sbjct: 385 VVDVFKKLLPNSVDPSG--------EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARM 436
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
LEAMRRQDD SHPD V+YTTVVSA V AG MDRARQVLAEM R+GV ANRITYN+LLKG
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
YCKQLQID+A +LLREM EDA I+PDVVSYNI+IDGCIL+DDSAGAL+FFNEMR RGIAP
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAP 556
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
TKISYTTLMKAFA+SGQPKLA+RVFDEM+NDPRVKVDLIAWNMLVEGYCRLG
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRV 616
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPP-- 630
NGF+P+V TYGS ANG++ ARKPG+AL+LW E+KER + SDSS P
Sbjct: 617 VSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAP 676
Query: 631 --LKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSK 688
LKPDEGLLDTLADICVRAAFF+KALEI+ACMEENGIPPNKTK+ +IYVEMHSRMFTSK
Sbjct: 677 PMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSK 736
Query: 689 HASRARQDRRVERKRAAEAFKFWLGLPNSYYGSEWRLEP 727
HAS+AR DRRVERKRAAEAFKFWLGLPNSYYGSEW+L P
Sbjct: 737 HASQARIDRRVERKRAAEAFKFWLGLPNSYYGSEWKLGP 775
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 166/715 (23%), Positives = 304/715 (42%), Gaps = 78/715 (10%)
Query: 61 PEPLDHKLLTLLQQRKTEEAWIAYTQCTHL---PNPTCLSRLVSQLSYHNTLPS--LTRA 115
P L+ ++ + + + +EAW + Q + P + ++ +V + + +L S L +
Sbjct: 95 PAKLNEEIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVV--VCFAESLDSNWLQKG 152
Query: 116 QSILTRLRNERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVV 175
S++ + E + + L+ + A+++++ ++ + PHV AWSAV+
Sbjct: 153 YSLVEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETEEYPHVSAWSAVL 212
Query: 176 SR--LASSGDSVEA-----LG-LFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
+ LA SG + A +G LF RK ++ + A +P+T N L C
Sbjct: 213 AHMSLAGSGSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLA-MKPNTQVLNVALAGCLLF 271
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
G + QL D +P+ GV DA I+ + R R++ L L+R +++ L +
Sbjct: 272 GTTRKAEQLLDMIPKIGVKADANLLVIMAHIYERNGRREELR-KLQRHIDEACNLNESQF 330
Query: 288 ----HSLVAAYVDFGDLDTAEIIVQAMREK----RRDLCRILRESNS--------EYIGG 331
+ L+ ++ FGDL++A +V M + R L + E ++ + + G
Sbjct: 331 WQFYNCLLMCHLKFGDLESASKMVLEMLRRGKVARNSLGAAILEFDTADDGRLYTKRVSG 390
Query: 332 KNDSV---------------------------FQKLLPNSMNQSXXXXXXXVYQPPLLPK 364
K V F KL + + Q L+
Sbjct: 391 KGSEVKEHDNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDVLGALLAKLHVQVELITS 450
Query: 365 P---YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
P IY L K +++SG++ + + L +D S D+ V++A +
Sbjct: 451 ERGVLQPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVS-SDNSMLINVINACISL 509
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
G +D+A +L EM GV Y+ LLK YC Q + LLR+ A+ A IQ D
Sbjct: 510 GMLDQAHDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRD-AQKAGIQLDSSC 568
Query: 482 YNILIDGCILVDDSAGALSFFNEMR-ARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
Y LI ++ +D+ GAL+ F EM+ A+ + + L+K + + L ++ E+
Sbjct: 569 YEALIQSQVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREI 628
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI-ALAR 599
+ + WN ++ + + G G P+ T+ S G A+
Sbjct: 629 REVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGS 688
Query: 600 KPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
K E LW E+K + ++ +K D+ LLD + VR FF +A E+V
Sbjct: 689 KYTEVTELWGEMK----------SIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVE 738
Query: 660 CMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAAEAFKFWLGL 714
ME+ + +K K+ ++++ H + K A + + + +++++ A FK WLGL
Sbjct: 739 MMEKKNMFVDKYKYRMLFLKYHKTAYKGK-APKVQSESQLKKREAGLVFKKWLGL 792
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 158/659 (23%), Positives = 274/659 (41%), Gaps = 87/659 (13%)
Query: 72 LQQRKTEEAWIAY---TQCTHLPNPTCLSRLVSQLSYHNTLPSLTRAQSILTRLRN---- 124
L T+EAW A+ T + LP ++ L++ LS +SI RL+
Sbjct: 69 LNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEG-----SGESISHRLKRAFAS 123
Query: 125 -----ERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLA 179
E+ L+ + A ++VK M ++ Y W +V +
Sbjct: 124 AAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDIC 183
Query: 180 SSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQ-LFD 238
S L F V + +I+ + +PD A NA L AC + + + +
Sbjct: 184 RENGS---LAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIE 240
Query: 239 EMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHS-LVAAYVDF 297
M GV PD LS+ + L RK ++ + LE +++ L+S +++ YV
Sbjct: 241 SMAVLGVKPDELSFGFLAYLYARKGLREK-ISELENLMDGFGFASRRILYSNMISGYVKS 299
Query: 298 GDLDT-AEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXV 356
GDLD+ +++I+ +++E GG+ S
Sbjct: 300 GDLDSVSDVILHSLKE-----------------GGEESSF-------------------- 322
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
+ Y L+KG+++S V +++ ++ + S D +++
Sbjct: 323 ------------SVETYCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIIN 370
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRI-TYNILLKGYCKQLQIDKARELLREMAEDAEI 475
A V GF D+A +L EM G + I Y +LK YCK+ + +A +L+ E++ +
Sbjct: 371 ACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSG-L 429
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
Q DV N LI+ + D A + F +MR + K SY T+M + +P+L
Sbjct: 430 QLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAA 489
Query: 536 VFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
DE+V DPRV+V+ WN ++ +C+ G + P+ TY S NG
Sbjct: 490 FLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGY 549
Query: 596 ALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKAL 655
K L+LWNE+K + + + S + D L+D V+ FF A+
Sbjct: 550 VSGEKYFNVLLLWNEIKGKISSVEAEKRS-------RLDHALVDAFLYALVKGGFFDAAM 602
Query: 656 EIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAAEAFKFWLGL 714
++V +E I +K ++ + ++E H ++ K R R +++E + AFK W GL
Sbjct: 603 QVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKL--RKRNYKKME---SLVAFKNWAGL 656
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 158/669 (23%), Positives = 269/669 (40%), Gaps = 110/669 (16%)
Query: 64 LDHKLLTLLQQRKTEEAWI---AYTQCTHLPNPTCLSRLVSQLS-YHNT-----LPSLTR 114
L H L+T T++AW ++ + LP+ L+ L++ LS +HNT L +
Sbjct: 35 LHHSLIT----HDTDQAWKVFRSFAAASSLPDKRLLNSLITHLSSFHNTDQNTSLRHRLK 90
Query: 115 AQSILTRLRNERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAV 174
+ T E+ L+ + + A ++V+ M ++ Y W +
Sbjct: 91 RAFVSTTYVIEKDPILLEFETVRTVLESMKLAKASGPALALVECMFKNRYFVPFDLWGDL 150
Query: 175 VSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFL 234
+ + S+ A F V R +I + +PD A NA L AC +
Sbjct: 151 LIDVCRENGSLAA---FLKVFRESCRIAVDEKLDFMKPDLVASNAALEACCRQMESLADA 207
Query: 235 Q-LFDEMPQFGVVPDALSYNIVMKLCCRK----------DRKDLLVFVLERILEQNVPLC 283
+ L + M GV PD LS+ + L RK D D L F RIL
Sbjct: 208 ENLIESMDVLGVKPDELSFGFLAYLYARKGLREKISELEDLMDGLGFASRRIL------- 260
Query: 284 MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPN 343
S+++ YV GDLD+A ++ LC + G S F +
Sbjct: 261 ---YSSMISGYVKSGDLDSASDVI---------LCSL--------KGVGEASSFSE---- 296
Query: 344 SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML-EAMRRQDDS 402
Y L++G+++S V +++ EA + + S
Sbjct: 297 ---------------------------ETYCELVRGFIESKSVESLAKLIIEAQKLESMS 329
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
V + +V+A VK GF + +L E+ G S Y +LK YCK+ + +A
Sbjct: 330 TDVGGSVGFG-IVNACVKLGF--SGKSILDELNAQGGSGGIGVYVPILKAYCKEGRTSEA 386
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
+L+ E++ +Q DV +YN +I+ + D AL+ F +MR +A K Y T+M
Sbjct: 387 TQLVTEISSSG-LQLDVETYNTMIEASMTKHDFLSALTLFRDMRETRVADLKRCYLTIMT 445
Query: 523 AFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFH 582
+ +P+L +E++ DPRV+V WN ++ +C+ G +
Sbjct: 446 GLLENQRPELMAEFVEEVMEDPRVEVKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQYE 505
Query: 583 PDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLA 642
P+ TY S NG K E +++W E K++ K + L D
Sbjct: 506 PNNQTYLSLINGYVSCEKYFEVVVIWKEFKDK---------------KAKLEHALADAFL 550
Query: 643 DICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERK 702
+ V+ FF AL+++ +E I +K ++ ++E + K R R+ +++E
Sbjct: 551 NALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKNLRLPKL--RKRKMKKIE-- 606
Query: 703 RAAEAFKFW 711
+AFK W
Sbjct: 607 -FLDAFKNW 614
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 214/525 (40%), Gaps = 50/525 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
AA+V ML P + + V+ + + AL L R +T+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH-----------GCV 249
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P++ + ++++ + LQL +EM G VPDA ++N V+ C+ DR + +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ R+L + T L+ G +D A +DL R E +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA-----------KDL--FYRIPKPEIV-- 354
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+F L+ + V + P+ Y +L+ GY K G V +
Sbjct: 355 ----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L MR + P+ SYT +V K G +D A VL EM+ G+ N + +N L+
Sbjct: 411 VLHDMRNK---GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
+CK+ +I +A E+ REM +PDV ++N LI G VD+ AL +M + G+
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
++Y TL+ AF G+ K A ++ +EMV +D I +N L++G CR G
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS-PLDEITYNSLIKGLCRAGEVDKARS 585
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
+G P + NG+ + EA+ E+ R
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST-------------- 631
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
PD ++L + RA L + ++ GIPP+ F +
Sbjct: 632 -PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 186/483 (38%), Gaps = 48/483 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+++ M + G +P+ + ++ L+ EAL L +
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM-----------FLMGCV 284
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD FN V+ ++ + M G PD ++Y +M C+ R D +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR---DLCRILRESNSEY 328
RI + + + T +H +V G LD A+ ++ M D+C NS
Sbjct: 345 FYRIPKPEIVIFNTLIH----GFVTHGRLDDAKAVLSDMVTSYGIVPDVC----TYNSLI 396
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT--------------------- 367
G + + L + VY +L +
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT + L+ + K R+ + V + M R+ PD ++ +++S L + + A
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRK---GCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+L +M GV AN +TYN L+ + ++ +I +AR+L+ EM D ++YN LI
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS-PLDEITYNSLIK 572
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G + A S F +M G AP+ IS L+ SG + A EMV
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D++ +N L+ G CR G G PD T+ + + + +A +L
Sbjct: 633 -DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 608 WNE 610
+E
Sbjct: 692 LDE 694
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 186/445 (41%), Gaps = 51/445 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
AA +V ML G+ P + +++ L G A LF + +
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---------------PK 350
Query: 212 PDTGAFNAVLNACANSG---DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
P+ FN +++ G D K L D + +G+VPD +YN L ++ L+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLS--DMVTSYGIVPDVCTYN---SLIYGYWKEGLV 405
Query: 269 VFVLERILEQNVPLCMTTLHS---LVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESN 325
LE + + C ++S LV + G +D A ++ M
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD------------ 453
Query: 326 SEYIGGKNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLP-KPYTPNTRIYTTLMKGYMKS 383
G K ++V F L+ + +++ +P K P+ + +L+ G +
Sbjct: 454 ----GLKPNTVGFNCLISAFCKEHRIPEAVEIFRE--MPRKGCKPDVYTFNSLISGLCEV 507
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
+ + +L M + A + V+Y T+++A ++ G + AR+++ EM G +
Sbjct: 508 DEIKHALWLLRDMISEGVVA---NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
ITYN L+KG C+ ++DKAR L +M D P +S NILI+G A+ F
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRL 563
EM RG P +++ +L+ +G+ + +F ++ + + D + +N L+ C+
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG-IPPDTVTFNTLMSWLCKG 682
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTY 588
G +GF P+ T+
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS- 210
A V+ M G P+V +++ +V G EA + +++AD
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN------------EMSADGL 455
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+P+T FN +++A +++F EMP+ G PD ++N ++ C D ++
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI- 329
+L ++ + V T ++L+ A++ G++ A +V M + L I S + +
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 330 -GGKND---SVFQKLL--------------PNSMNQSXXXXXXXVYQPPLLPKPYTPNTR 371
G+ D S+F+K+L N + +S +Q ++ + TP+
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+ +L+ G ++GR+ D + M R+ PD V++ T++S L K GF+ A +L
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMF---RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKAR 463
E G N T++ILL+ Q +D+ R
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 129/375 (34%), Gaps = 92/375 (24%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ ++M+ Y K+G T R++ MR + + P SY V+ LV A V
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMR--NVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ--------------- 476
+M + T+ +++K +C +ID A LLR+M + +
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 477 -------------------PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
PD ++N +I G D A N M RG AP I+Y
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 518 -------------------------------TTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
TL+ F G+ A V +MV +
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
D+ +N L+ GY + G G P+V +Y +G K EA
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFR-----KALEIVACM 661
+ NE+ S LKP +T+ C+ +AF + +A+EI M
Sbjct: 446 VLNEM---------------SADGLKP-----NTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 662 EENGIPPNKTKFTRI 676
G P+ F +
Sbjct: 486 PRKGCKPDVYTFNSL 500
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 200/466 (42%), Gaps = 32/466 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S + +++ GY P+ +S +++ L G EAL ++ D V +
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL-----------ELVDRMVEMGHK 190
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD N ++N SG + L D+M ++G P+A++Y V+ + C+ + L + +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ E+N+ L ++ G LD A + M K G
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK----------------GI 294
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + +L + ++ + PN ++ L+ ++K G++ +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M + PD ++YT+++ K +D+A Q++ M G N T+NIL+
Sbjct: 355 LHKEMIHR---GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GYCK +ID EL R+M+ + D V+YN LI G + A F EM +R +
Sbjct: 412 GYCKANRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++Y L+ +G+ + A +F E + ++++D+ +N+++ G C
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIF-EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
G P V TY G+ EA +L+ +++E A
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 191/457 (41%), Gaps = 44/457 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ + +A A + + L L +M G+ + + +I++ CR + L
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ +I++ T +L+ G + A +V M E +G
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE----------------MGH 189
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K D + L N + S + ++ PN Y ++ KSG+ T
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ---TAL 246
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+E +R+ ++ D V Y+ ++ L K G +D A + EM G++ N ITYNIL+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+C + D +LLR+M + +I P+VV++++LID + A EM RGIA
Sbjct: 307 GFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXX 568
P I+YT+L+ F A+++ D MV+ DP ++ +N+L+ GYC+
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR----TFNILINGYCKANRIDD 421
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSV 628
G D TY + G K A L+ E+ R V
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR------------KV 469
Query: 629 PP-LKPDEGLLDTLADICVRAAFFRKALEIVACMEEN 664
PP + + LLD L D KALEI +E++
Sbjct: 470 PPNIVTYKILLDGLCD----NGESEKALEIFEKIEKS 502
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 168/423 (39%), Gaps = 64/423 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M+ G P+ + V++ + SG + A+ L R + R + +
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-----------NIK 260
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D ++ +++ G LF+EM G+ + ++YNI++ C R D +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + + T L+ ++V G L AE + + M + G
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----------------GI 364
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D++ L + + ++ K PN R + L+ GY K+ R+ D
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG-- 422
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
LE R+ D V+Y T++ + G ++ A+++ EM V N +TY ILL
Sbjct: 423 -LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 452 GYCKQLQIDKARELLREM------------------------AEDA----------EIQP 477
G C + +KA E+ ++ +DA ++P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 478 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVF 537
V +YNI+I G + A F +M G AP +Y L++A G + ++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 538 DEM 540
+E+
Sbjct: 602 EEL 604
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 136/360 (37%), Gaps = 66/360 (18%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ M++ P+V +S ++ G EA L + + R
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-----------GIA 365
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT + ++++ Q+ D M G P+ ++NI++ C+ +R D + +
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++ + V T ++L+ + + G L+ A+ + Q M
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM--------------------- 464
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + PN Y L+ G +G ++ +
Sbjct: 465 ------------------------------VSRKVPPNIVTYKILLDGLCDNG---ESEK 491
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
LE + + S D Y ++ + A +D A + + GV TYNI++
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CK+ + +A L R+M ED PD +YNILI + D+ ++ E++ G +
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGH-APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 226/523 (43%), Gaps = 45/523 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V + + RSG +V + +V+ L G +E +G F L ++ + V
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDG-KMEKVGTF------LSQVQEKGVY---- 267
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +++A ++ G + +L + MP G P +YN V+ C+ + + V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+L + TT SL+ GD+ E + MR RD+
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS--RDVVP------------ 373
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D V + + +S +Y + P+ IYT L++GY + G +S +
Sbjct: 374 --DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M +Q D V+Y T++ L K + A ++ EMT + + T IL+
Sbjct: 432 LRNEMLQQ---GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK + A EL ++M E I+ DVV+YN L+DG V D A + +M ++ I
Sbjct: 489 GHCKLGNLQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
PT ISY+ L+ A G A RV+DEM++ +K ++ N +++GYCR G
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
GF PD +Y + G +A L +++E E G L
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE--EQG-----------GL 653
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFT 674
PD +++ R ++A ++ M E G+ P+++ +T
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 191/471 (40%), Gaps = 67/471 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V MLRSG P + +++ GD VE +F + R D
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-----------DVV 372
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD F+++++ SG+ L F+ + + G++PD + Y I+++ CRK + + +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+L+Q + + T ++++ KR+ L G
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLC-----------------KRKML-------------G 462
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ D +F ++ + L P YT T L+ G+ K G + + +
Sbjct: 463 EADKLFNEMT----------------ERALFPDSYT-----LTILIDGHCKLGNLQNAME 501
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M+ + D V+Y T++ K G +D A+++ A+M + I+Y+IL+
Sbjct: 502 LFQKMK---EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
C + + +A + EM I+P V+ N +I G +++ SF +M + G
Sbjct: 559 ALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV-DLIAWNMLVEGYCRLGXXXXXX 570
P ISY TL+ F A + +M + V D+ +N ++ G+CR
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDR 621
G +PD TY NG EA + +E+ +R + D+
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 5/245 (2%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N ++ L++ Y+++ ++ + +R + + S + ++ +LV+ G+++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID---ACNALIGSLVRIGWVELAW 220
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
V E++R GV N T NI++ CK +++K L ++ E + PD+V+YN LI
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-VYPDIVTYNTLISA 279
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
A N M +G +P +Y T++ G+ + A VF EM+ +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSP 338
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
D + L+ C+ G PD+ + S + + +AL+ +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 609 NEVKE 613
N VKE
Sbjct: 399 NSVKE 403
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 202/459 (44%), Gaps = 35/459 (7%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PDT +N +LN + K+ +M +G+ PD ++N+++K CR + +
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+LE + + T +++ Y++ GDLD A I + M E C S + +
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG---CSWSNVSVNVIVH 267
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
G F K + + Q P YT + TL+ G K+G V +
Sbjct: 268 G-----FCK--EGRVEDALNFIQEMSNQDGFFPDQYT-----FNTLVNGLCKAGHVKHAI 315
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+++ M ++ PD +Y +V+S L K G + A +VL +M S N +TYN L+
Sbjct: 316 EIMDVMLQE---GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
CK+ Q+++A EL R + I PDV ++N LI G L + A+ F EMR++G
Sbjct: 373 STLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
P + +Y L+ + G+ A + +M + +I +N L++G+C+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYNTLIDGFCKANKTREAE 490
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPP 630
+G + TY + +G+ +R+ +A L +++ +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-------------- 536
Query: 631 LKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
KPD+ ++L R +KA +IV M NG P+
Sbjct: 537 -KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 44/390 (11%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLF-RAVTR---------- 196
H +A ++ ML+ GY P V +++V+S L G+ EA+ + + +TR
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 197 ----------RLRKITDPDVAADSR---PDTGAFNAVLNACANSGDGKMFLQLFDEMPQF 243
++ + T+ S+ PD FN+++ + + ++ ++LF+EM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 244 GVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
G PD +YN+++ C K + D + +L+++ + T ++L+ + A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 304 EIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLP 363
E I M E G +SV L + + +S ++
Sbjct: 490 EEIFDEM----------------EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
+ P+ Y +L+ + + G + +++AM + PD V+Y T++S L KAG
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT---SNGCEPDIVTYGTLISGLCKAGR 590
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
++ A ++L + G++ YN +++G ++ + +A L REM E E PD VSY
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 484 ILIDG-CILVDDSAGALSFFNEMRARGIAP 512
I+ G C A+ F E+ +G P
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 185/462 (40%), Gaps = 37/462 (8%)
Query: 204 PDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKD 263
P AA S D +++ + +S ++F L + P F P AL I+++L R
Sbjct: 41 PHSAALSSTDVKLLDSLRSQPDDSAALRLF-NLASKKPNFSPEP-ALYEEILLRLG-RSG 97
Query: 264 RKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRE 323
D + +LE + + +T L+ +Y F D +V M ++
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE---------- 147
Query: 324 SNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
G K D+ F + N + + + P+ + L+K ++
Sbjct: 148 -----FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRA 202
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
++ + MLE M PD ++TTV+ ++ G +D A ++ +M G S +
Sbjct: 203 HQLRPAILMLEDM---PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
++ N+++ G+CK+ +++ A ++EM+ PD ++N L++G A+ +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRL 563
M G P +Y +++ G+ K A V D+M+ + + +N L+ C+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKE 378
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDREN 623
G PDV T+ S G+ L R A+ L+ E++ +
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-------- 430
Query: 624 SDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
+PDE + L D +AL ++ ME +G
Sbjct: 431 -------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 163/404 (40%), Gaps = 24/404 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD FN ++N +G K +++ D M Q G PD +YN V+ C+ V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLC- 318
L++++ ++ T ++L++ ++ A + + + K + LC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 319 ----RILRESNSEY--IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
R+ E E G + D +L +S+ + +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y TL+ G+ K+ + + + + M S + V+Y T++ L K+ ++ A Q++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSR---NSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+M G ++ TYN LL +C+ I KA ++++ M + +PD+V+Y LI G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKA 588
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A ++ +GI T +Y +++ + A +F EM+ D ++
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 553 WNMLVEGYCRLGX-XXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
+ ++ G C G GF P+ + A G+
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 207/458 (45%), Gaps = 67/458 (14%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
YA S + +++ GY P ++ +++ L EAL ++ D V
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL-----------ELVDRMVEMGH 189
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+P N ++N +G + L D M + G P+ ++Y V+ + C+ + L +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L ++ E+N+ L D II+ LC+
Sbjct: 250 LLRKMEERNIKL----------------DAVKYSIIIDG-------LCK----------D 276
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
G D+ F L N M K + + Y TL+ G+ +GR D
Sbjct: 277 GSLDNAFN--LFNEME----------------IKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
++L M ++ S P+ V+++ ++ + VK G + A Q+L EM + G++ N ITYN L+
Sbjct: 319 KLLRDMIKRKIS---PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G+CK+ ++++A +++ M PD++++NILI+G + L F EM RG+
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
++Y TL++ F SG+ ++A ++F EMV+ RV+ D++++ +L++G C G
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
+ D+G Y +G+ A K +A L+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 26/307 (8%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ + PN Y ++ KSG+ T +E +R+ ++ D V Y+ ++ L K
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQ---TALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G +D A + EM G A+ ITYN L+ G+C + D +LLR+M + +I P+VV
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVV 334
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++++LID + A EM RGIAP I+Y +L+ F + + A ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 541 VN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIAL 597
++ DP D++ +N+L+ GYC+ G + TY + G
Sbjct: 395 ISKGCDP----DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 598 ARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEI 657
+ K A L+ E+ R R R P + + LLD L D KALEI
Sbjct: 451 SGKLEVAKKLFQEMVSR----RVR-------PDIVSYKILLDGLCD----NGELEKALEI 495
Query: 658 VACMEEN 664
+E++
Sbjct: 496 FGKIEKS 502
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P TL+ G +G+VSD V +++ R ++ P+ V+Y V++ + K+G
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLID---RMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A ++L +M + + + Y+I++ G CK +D A L EM E + D+++YN L
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTL 304
Query: 486 IDGCILV---DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
I G DD A L +M R I+P ++++ L+ +F G+ + A ++ EM+
Sbjct: 305 IGGFCNAGRWDDGAKLL---RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
+ + I +N L++G+C+ G PD+ T+ NG A +
Sbjct: 362 RG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 603 EALILWNEVKER 614
+ L L+ E+ R
Sbjct: 421 DGLELFREMSLR 432
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 178/434 (41%), Gaps = 74/434 (17%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M+ +G+ P+ + V++ + SG + A+ L R + R K+
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL---------- 261
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D ++ +++ G LF+EM G D ++YN ++ C R D +
Sbjct: 262 -DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
L ++++ + + T L+ ++V G L A+ +++ M ++ C+
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 320 ILRESNSEYI-------GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
R + + G D + +L N ++ + + NT
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAM--RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
Y TL++G+ +SG++ ++ + M RR PD VSY ++ L G +++A ++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRR-----VRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 431 LAEMTR------IGV---------SANRI--------------------TYNILLKGYCK 455
++ + IG+ +A+++ YNI++ C+
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ + KA L R+M E+ PD ++YNILI + DD+ A EM++ G P +
Sbjct: 556 KDSLSKADILFRKMTEEGH-APDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADV 613
Query: 516 SYTTLMKAFALSGQ 529
S ++ SG+
Sbjct: 614 STVKMVINMLSSGE 627
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 198/462 (42%), Gaps = 32/462 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S + +++ GY P +S +++ L G EAL ++ D V +
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL-----------ELVDRMVEMGHK 174
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P NA++N +G + L D M + G P+ ++Y V+K+ C+ + L + +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ E+ + L ++ G LD A + M K G
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK----------------GF 278
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K D + L + ++ + TP+ ++ L+ ++K G++ +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M ++ S PD V+YT+++ K +D+A +L M G N T+NIL+
Sbjct: 339 LHKEMIQRGIS---PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GYCK ID EL R+M+ + D V+YN LI G + A F EM +R +
Sbjct: 396 GYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P +SY L+ +G+P+ A +F E + ++++D+ +N+++ G C
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G PDV TY G+ EA +L+ +++E
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 179/432 (41%), Gaps = 38/432 (8%)
Query: 186 EALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGV 245
+A+ LF+ +TR + RP F+ + + A + + L L +M G+
Sbjct: 55 DAVDLFQEMTR-----------SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 246 VPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEI 305
+ + +I++ CCR + L + +I++ T +L+ G + A
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 306 IVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKP 365
+V M E +G K + L N + + + ++
Sbjct: 164 LVDRMVE----------------MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ PN Y ++K KSG+ T +E +R+ ++ D V Y+ ++ L K G +D
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQ---TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A + EM G A+ I Y L++G+C + D +LLR+M + +I PDVV+++ L
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSAL 323
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND-- 543
ID + A EM RGI+P ++YT+L+ F Q A+ + D MV+
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 544 -PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
P ++ +N+L+ GYC+ G D TY + G K
Sbjct: 384 GPNIR----TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 603 EALILWNEVKER 614
A L+ E+ R
Sbjct: 440 VAKELFQEMVSR 451
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 172/436 (39%), Gaps = 32/436 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M+ +G+ P+ + V+ + SG + A+ L R + R K+
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL---------- 245
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D ++ +++ G LF+EM G D + Y +++ C R D +
Sbjct: 246 -DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + + +L+ +V G L AE + + M ++ G
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR----------------GI 348
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D+V L + + ++ K PN R + L+ GY K+ + D
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG-- 406
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
LE R+ D V+Y T++ + G ++ A+++ EM V + ++Y ILL
Sbjct: 407 -LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G C + +KA E+ E E ++++ D+ YNI+I G A F + +G+
Sbjct: 466 GLCDNGEPEKALEIF-EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P +Y ++ G A +F +M D + +N+L+ + G
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGCTYNILIRAHLGEGDATKSAK 583
Query: 572 XXXXXXXNGFHPDVGT 587
GF D T
Sbjct: 584 LIEEIKRCGFSVDAST 599
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A + ++ ++G + +T++ L+ G C + ++ +A EL+ M E +P +++ N L+
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH-KPTLITLNALV 184
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+G L + A+ + M G P +++Y ++K SGQ LA + +M + ++
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKI 243
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
K+D + ++++++G C+ G GF D+ Y + G A
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA-------- 295
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
RW+ G + D + PD L D V+ R+A E+ M + GI
Sbjct: 296 ------GRWDDGA-KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 667 PPNKTKFTRI 676
P+ +T +
Sbjct: 349 SPDTVTYTSL 358
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 36/446 (8%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
T +A SV+ +++ GY P ++ ++ L G EA+ L D V
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL-----------VDRMVE 186
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
+PD +N+++N SGD + L L +M + V D +Y+ ++ CR D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ + + + + + + T +SLV G + ++++ M + RE
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM---------VSREIVPN 297
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
I F LL + + +Y+ ++ + +PN Y TLM GY R+S
Sbjct: 298 VI------TFNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ ML+ M R S PD V++T+++ +D +V +++ G+ AN +TY+
Sbjct: 351 EANNMLDLMVRNKCS---PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA--GALSFFNEM 505
IL++G+C+ +I A EL +EM + PDV++Y IL+DG L D+ AL F ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHG-VLPDVMTYGILLDG--LCDNGKLEKALEIFEDL 464
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
+ + + YTT+++ G+ + A +F + VK +++ + +++ G C+ G
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG-VKPNVMTYTVMISGLCKKGS 523
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSF 591
+G P+ TY +
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 187/464 (40%), Gaps = 61/464 (13%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ +A A + + L ++ G+ + + NI++ CR + V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
L ++++ TT ++L+ G + A ++V M E +CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 320 ---------ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
+LR+ + K D + +S+ + + K +
Sbjct: 206 SGDTSLALDLLRKMEERNV--KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
Y +L++G K+G+ +D +L+ M ++ P+ +++ ++ VK G + A ++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM G+S N ITYN L+ GYC Q ++ +A +L M + + PD+V++ LI G
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYC 379
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND------- 543
+V + F + RG+ ++Y+ L++ F SG+ KLA +F EMV+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 544 -------------------------PRVKVDL--IAWNMLVEGYCRLGXXXXXXXXXXXX 576
+ K+DL + + ++EG C+ G
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 577 XXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRD 620
G P+V TY +G+ EA IL +++E A D
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 20/309 (6%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y +++ G +SG DT L+ +R+ ++ D +Y+T++ +L + G +D A
Sbjct: 191 PDVVTYNSIVNGICRSG---DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ EM G+ ++ +TYN L++G CK + + LL++M EI P+V+++N+L+D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLD 306
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ A + EM RGI+P I+Y TLM + + + A+ + D MV + +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCS 365
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D++ + L++GYC + G + TY G + K A L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
+ E+ S +P + LLD L D KALEI ++++ +
Sbjct: 426 FQEMV-----------SHGVLPDVMTYGILLDGLCD----NGKLEKALEIFEDLQKSKMD 470
Query: 668 PNKTKFTRI 676
+T I
Sbjct: 471 LGIVMYTTI 479
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 156/384 (40%), Gaps = 32/384 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+ K M G V ++++V L +G + L + + R +
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-----------EIV 295
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ FN +L+ G + +L+ EM G+ P+ ++YN +M C ++R +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ ++ + T SL+ Y M ++ D ++ R N G
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGY--------------CMVKRVDDGMKVFR--NISKRGL 399
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
++V +L QS ++ P+ Y L+ G +G++ +
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E +++ S V YTT++ + K G ++ A + + GV N +TY +++
Sbjct: 460 IFEDLQK---SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CK+ + +A LLR+M ED P+ +YN LI + D + EM++ G +
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 512 PTKISYTTLMKAFALSGQPKLAHR 535
S ++ LS +L R
Sbjct: 576 ADASSIKMVIDML-LSAMKRLTLR 598
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 196/454 (43%), Gaps = 73/454 (16%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
ML + P A S++V L G EAL L ++++ D V+ P+ +N
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL-------VKRVVDFGVS----PNLFVYN 371
Query: 219 AVLNACANSGDGKMFLQ---LFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERI 275
A++++ G+ F + LFD M + G+ P+ ++Y+I++ + CR+ + D + L +
Sbjct: 372 ALIDSLCK---GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 276 LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDS 335
++ + L + +SL+ + FGD+ AE + M K+ +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------------------- 469
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
P YT+LM GY G+++ +R+
Sbjct: 470 --------------------------------PTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M + + P ++TT++S L +AG + A ++ EM V NR+TYN++++GYC+
Sbjct: 498 MTGKGIA---PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ + KA E L+EM E I PD SY LI G L ++ A F + + +I
Sbjct: 555 EGDMSKAFEFLKEMTEKG-IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
YT L+ F G+ + A V EMV V +DL+ + +L++G +
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRG-VDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
G PD Y S + + EA +W+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 167/390 (42%), Gaps = 58/390 (14%)
Query: 189 GLFRA-VTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
GLFRA + R K+ + + +P+ +N ++ GD + EM + G+VP
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 248 DALSYN-IVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEII 306
D SY ++ LC + VFV + + + N L L+ + G L+ A +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 307 VQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPY 366
Q M ++ DL D V +L + + + +
Sbjct: 635 CQEMVQRGVDL----------------DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+ IYT+++ K+G + + + M + P+ V+YT V++ L KAGF++
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE---GCVPNEVTYTAVINGLCKAGFVNE 735
Query: 427 ARQVLAEMTRI-----------------------------------GVSANRITYNILLK 451
A + ++M + G+ AN TYN+L++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+C+Q +I++A EL+ M D + PD ++Y +I+ +D A+ +N M +GI
Sbjct: 796 GFCRQGRIEEASELITRMIGDG-VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
P +++Y TL+ ++G+ A + +EM+
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 20/304 (6%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y +L+ G+ K G +S + M + P V+YT+++ G +++A ++
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINK---KLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EMT G++ + T+ LL G + I A +L EMAE ++P+ V+YN++I+G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEE 555
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
D + A F EM +GI P SY L+ L+GQ A +VF + ++ +++ I
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC 614
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+ L+ G+CR G G D+ YG +G + K + + + +K
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG---SLKHKDRKLFFGLLK 671
Query: 613 ERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTK 672
E + G LKPD+ + ++ D + F++A I M G PN+
Sbjct: 672 EMHDRG------------LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 673 FTRI 676
+T +
Sbjct: 720 YTAV 723
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 5/207 (2%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
V++ + P R + L+ G +K + + M PD YT V+
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV---SVGIRPDVYIYTGVI 234
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+L + + RA++++A M G N + YN+L+ G CK+ ++ +A + +++A ++
Sbjct: 235 RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA-GKDL 293
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
+PDVV+Y L+ G V + L +EM +P++ + ++L++ G+ + A
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 536 VFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+ +V D V +L +N L++ C+
Sbjct: 354 LVKRVV-DFGVSPNLFVYNALIDSLCK 379
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 184/472 (38%), Gaps = 106/472 (22%)
Query: 224 CANSGDGKM--FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVP 281
C S +G M LFD M G++P A +Y +++ CR+ +L + ++N+
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
+ T ++V GDLD A IV+ M CR
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CR---------------------- 449
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
PN IYTTL+K ++++ R D +R+L+ M+ Q
Sbjct: 450 --------------------------PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-- 481
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
PD Y +++ L KA MD AR L EM G+ N TY + GY + +
Sbjct: 482 -GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 462 ARELLREMAE----------------------------------DAEIQPDVVSYNILID 487
A + ++EM E D I D +Y +L++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G D A F EMR +GIAP SY L+ F+ G + A +FDEMV + +
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-LT 659
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
++I +NML+ G+CR G G HP+ TY + +G + EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
++E+K + L PD + TL D C R +A+ I
Sbjct: 720 FDEMK---------------LKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 31/351 (8%)
Query: 171 WSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDG 230
+ VV + SSGD A + + + +A+ RP+ + ++ +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEM-----------IASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 231 KMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSL 290
+++ EM + G+ PD YN ++ + R D L ++E + T +
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 291 VAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXX 350
++ Y++ + +A+ V+ MRE C +L N + L+ +
Sbjct: 529 ISGYIEASEFASADKYVKEMRE-----CGVL----------PNKVLCTGLINEYCKKGKV 573
Query: 351 XXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVS 410
Y+ ++ + + + YT LM G K+ +V D + MR + PD S
Sbjct: 574 IEACSAYRS-MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK---GIAPDVFS 629
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
Y +++ K G M +A + EM G++ N I YN+LL G+C+ +I+KA+ELL EM+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
+ P+ V+Y +IDG D A A F+EM+ +G+ P YTTL+
Sbjct: 690 VKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 176/423 (41%), Gaps = 44/423 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A VK M G LP+ + +++ G +EA +R+ + D + D++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS-------MVDQGILGDAK 593
Query: 212 PDTGAFNAVL-NACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
T N + N + + ++F EM G+ PD SY +++ +
Sbjct: 594 TYTVLMNGLFKNDKVDDAE-----EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ + ++E+ + + + L+ + G+++ A+ ++ M K G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK----------------G 692
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
++V + + +S + K P++ +YTTL+ G + V +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL-----AEMTRIGVSANRIT 445
+ ++ S++ P + +++ + K G + +VL R G N +T
Sbjct: 753 TIFGTNKKGCASSTAP----FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVT 807
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YNI++ CK+ ++ A+EL +M ++A + P V++Y L++G + A F+E
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN----DPRVKVDLIAWNMLVEGYC 561
A GI P I Y+ ++ AF G A + D+M D K+ + L+ G+
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 562 RLG 564
++G
Sbjct: 927 KVG 929
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 187/512 (36%), Gaps = 106/512 (20%)
Query: 225 ANSGDGKMFLQLFDEMPQFGVVPDALSY----------------NIVMKLCCRKDRKDLL 268
S DG +F LFD G + +A+ +++ R +R DL
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV---------------QAMREK 313
V + ++E+NV + T H L+ A+ G++ + ++ A++ K
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 314 RRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
+C+ L Y +L + + + + + + Y
Sbjct: 266 ESMICKGLVPLKYTY----------DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVS---YTTVVSALVKAGFMDRARQV 430
+ L+ G +K GR +D + L + SH ++ Y + + K G M++A+ +
Sbjct: 316 SLLIDGLLK-GRNADAAKGL-----VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE-DAEIQPDVVSYNILIDGC 489
M G+ Y L++GYC++ + + ELL EM + + I P +Y ++ G
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGM 427
Query: 490 ILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
D GA + EM A G P + YTTL+K F + + A RV EM + + D
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPD 486
Query: 550 LIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
+ +N L+ G + NG P+ TYG+F +G
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY-------------- 532
Query: 610 EVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+ A+ F A + V M E G+ PN
Sbjct: 533 ------------------------------------IEASEFASADKYVKEMRECGVLPN 556
Query: 670 KTKFTRIYVEM--HSRMFTSKHASRARQDRRV 699
K T + E ++ + A R+ D+ +
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 157/352 (44%), Gaps = 32/352 (9%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y TL+ GY K ++ D ++L +M + P+ +SY V++ L + G M
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK---GLEPNLISYNVVINGLCREGRMKEV 294
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
VL EM R G S + +TYN L+KGYCK+ +A + EM + P V++Y LI
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIH 353
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ A+ F ++MR RG+ P + +YTTL+ F+ G A+RV EM ND
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDNGFS 412
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
++ +N L+ G+C G G PDV +Y + +G + EAL +
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 608 WNEVKER----------------WEAGRDRENSDSSVPPLK----PDEGLLDTLADICVR 647
E+ E+ E R +E D L+ PDE L +
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 648 AAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRV 699
KAL++ M E G+ P+ ++ + ++ + SR R+ +R+
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ-------SRTREAKRL 577
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 188/404 (46%), Gaps = 22/404 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQ-LFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
P ++NAVL+A S F + +F EM + V P+ +YNI+++ C D+ +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ +++ + + T ++L+ Y +D ++++M K G
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK----------------G 270
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+ + + ++ N + + + + Y+ + Y TL+KGY K G +
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
M M R + P ++YT+++ ++ KAG M+RA + L +M G+ N TY L+
Sbjct: 331 VMHAEMLRHGLT---PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G+ ++ +++A +LREM D P VV+YN LI+G + A++ +M+ +G+
Sbjct: 388 DGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
+P +SY+T++ F S A RV EMV + +K D I ++ L++G+C
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G PD TY + N + +AL L NE+ E+
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 189/410 (46%), Gaps = 34/410 (8%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
+A +V K ML S P+V ++ ++ +G+ AL LF D
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF-----------DKMETKGC 236
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
P+ +N +++ +L M G+ P+ +SYN+V+ CR+ R + F
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
VL + + L T ++L+ Y G+ A ++ M LR
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM----------LRH------- 339
Query: 331 GKNDSVFQKL-LPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G SV L +SM ++ + + + PN R YTTL+ G+ + G +++
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
R+L R +D+ P V+Y +++ G M+ A VL +M G+S + ++Y+ +
Sbjct: 400 YRVL---REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
L G+C+ +D+A + REM E I+PD ++Y+ LI G + A + EM G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
+ P + +YT L+ A+ + G + A ++ +EMV + V D++ +++L+ G
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMV-EKGVLPDVVTYSVLING 564
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 145/350 (41%), Gaps = 62/350 (17%)
Query: 366 YTPNTRIYTTLMKGYMKSGR-VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
+ P Y ++ ++S R +S + + M +S P+ +Y ++ AG +
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEML---ESQVSPNVFTYNILIRGFCFAGNI 221
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
D A + +M G N +TYN L+ GYCK +ID +LLR MA ++P+++SYN+
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG-LEPNLISYNV 280
Query: 485 LIDG-C----------ILVD------------------------DSAGALSFFNEMRARG 509
+I+G C +L + + AL EM G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV---DLIAWNMLVEGYCRLGXX 566
+ P+ I+YT+L+ + +G A D+M RV+ + + LV+G+ + G
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQM----RVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 567 XXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDS 626
NGF P V TY + NG + K +A+ + ++KE+
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG----------- 445
Query: 627 SVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
L PD T+ R+ +AL + M E GI P+ ++ +
Sbjct: 446 ----LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 132/337 (39%), Gaps = 45/337 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + M G P+ + ++ +V + G EA R LR++ D +
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY-------RVLREMNDNGFS---- 412
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +NA++N +G + + + ++M + G+ PD +SY+ V+ CR D + V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++E+ + T SL+ + + + + ++ C + E +G
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCE--------------QRRTKEACDLYEEMLR--VGL 516
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D L N+ ++ K P+ Y+ L+ G K R + R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVS-----------ALVKA----GFMDRARQVLAEMTR 436
+L + ++ S P V+Y T++ +L+K G M A QV M
Sbjct: 577 LLLKLFYEE---SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 437 IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA 473
+ YNI++ G+C+ I KA L +EM +
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 155/384 (40%), Gaps = 54/384 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V++ M +G+ P V ++A+++ +G +A+ + + +
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-----------GLS 447
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +++ VL+ S D L++ EM + G+ PD ++Y+ +++ C + R +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E +L +P T +L+ AY GDL+ A + M EK G
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK----------------GV 551
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLM-------------- 377
D V +L N +N+ L + P+ Y TL+
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 378 -KGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
KG+ G +++ ++ E+M ++ PD +Y ++ +AG + +A + EM +
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHK---PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 437 IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
G + +T L+K K+ ++++ ++ + E+ + +L++ ++
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVE----INHRE 723
Query: 497 G----ALSFFNEMRARGIAPTKIS 516
G L EM G P IS
Sbjct: 724 GNMDVVLDVLAEMAKDGFLPNGIS 747
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 202/466 (43%), Gaps = 39/466 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+++ G +P V A++ +++ L G EAL +F + + D+
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK------------DAA 374
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ +N +++ +G +L D M + G+ P+ + NI++ C+ + D +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 272 LERILEQNVPLCM---TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
E E + +C T SL+ G +D A + + M + CR
Sbjct: 435 FE---EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD---CRT-------- 480
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
N V+ L+ N N +Y+ ++ + +P+ ++ T M K+G
Sbjct: 481 ----NSIVYTSLIKNFFNHGRKEDGHKIYKD-MINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
M E ++ + PD SY+ ++ L+KAGF + ++ M G + YNI
Sbjct: 536 GRAMFEEIKAR---RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
++ G+CK +++KA +LL EM +P VV+Y +IDG +D A F E +++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
I + Y++L+ F G+ A+ + +E++ + +L WN L++ +
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINE 710
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
P+ TYG NG+ RK +A + W E++++
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 183/435 (42%), Gaps = 63/435 (14%)
Query: 158 SMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAF 217
SM ++G P+V+ + +V RL S EA +F + ++ PD F
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-----------CTPDEITF 450
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
++++ G +++++M +++ Y ++K RK+ + + ++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVF 337
QN + L++ + G+ + + + ++ +R + ++ S I +
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR-----FVPDARSYSI------LI 559
Query: 338 QKLLPNSM-NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM 396
L+ N++ Q +L +TR Y ++ G+ K G+V+ ++LE M
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVL------DTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 397 RRQD------------DSASHPDH--------------------VSYTTVVSALVKAGFM 424
+ + D + D V Y++++ K G +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
D A +L E+ + G++ N T+N LL K +I++A + M E + P+ V+Y I
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-LKCTPNQVTYGI 732
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
LI+G V A F+ EM+ +G+ P+ ISYTT++ A +G A +FD +
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 545 RVKVDLIAWNMLVEG 559
V D +N ++EG
Sbjct: 793 GVP-DSACYNAMIEG 806
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 182/465 (39%), Gaps = 43/465 (9%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
VV+ M + + P A++ ++ ++ S L LF+ + P
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE-----------LGYEPTV 203
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
F ++ A G L L DEM + D + YN+ + + + D+
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG---- 330
I + T S++ LD A + + + + RR C N+ +G
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY--AYNTMIMGYGSA 321
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
GK D + L K P+ Y ++ K G+V + +
Sbjct: 322 GKFDEAYSLLERQR------------------AKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
++ E M++ D+A P+ +Y ++ L +AG +D A ++ M + G+ N T NI++
Sbjct: 364 KVFEEMKK--DAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 451 KGYCKQLQIDKARELLREMAEDAEI-QPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
CK ++D+A + EM D ++ PD +++ LIDG V A + +M
Sbjct: 420 DRLCKSQKLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
I YT+L+K F G+ + H+++ +M+N DL N ++ + G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
F PD +Y +G+ A E L+ +KE+
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 21/304 (6%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P+ ++ G +K+ ++ + +++ MR+ P +YTT++ A D
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK---FKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+ +M +G + L++G+ K+ ++D A LL EM + + + D+V YN+
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVC 244
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
ID V A FF+E+ A G+ P +++YT+++ + + A +F+ + + R
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
V A+N ++ GY G G P V Y + K EAL
Sbjct: 305 VPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
++ E+K+ D++ P+ + L D+ RA A E+ M++ G
Sbjct: 364 KVFEEMKK-----------DAA-----PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 666 IPPN 669
+ PN
Sbjct: 408 LFPN 411
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 151/358 (42%), Gaps = 35/358 (9%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
+ K M+ P ++ + + + +G+ + +F + R R + PD
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFV----------PDA 552
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+++ +++ +G +LF M + G V D +YNIV+ C+ + + +LE
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG--GK 332
+ + + T S++ LD A ++ + + KR +L ++ S + G G+
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
D + L L+ K TPN + +L+ +K+ +++ +
Sbjct: 673 IDEAYLIL------------------EELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
++M+ + P+ V+Y +++ L K ++A EM + G+ + I+Y ++ G
Sbjct: 715 FQSMK---ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
K I +A L + + PD YN +I+G + + A S F E R RG+
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHV--SYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
R+ D R +E R + P H SY +++ + + D Q+L EM+ G +
Sbjct: 74 RLKDVNRAIEYFRWYERRTELP-HCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPS 132
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
T ++ G K ++ + +++ +M + +P +Y LI V+ S L+ F
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVV-QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+M+ G PT +TTL++ FA G+ A + DEM + D++ +N+ ++ + +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGK 250
Query: 563 LGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
+G NG PD TY S + A + EA+ ++ +++
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 28/410 (6%)
Query: 236 LFDEMPQFGVVPDALSYNIVMKLCCRKDR-KDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+F E P+ GV + SYNIV+ C+ R K+ +L L+ P + + ++V Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD-VISYSTVVNGY 291
Query: 295 VDFGDLDTAEIIVQAMREKRRD------------LCRILR-----ESNSEYI--GGKNDS 335
FG+LD +++ M+ K LCRI + E+ SE I G D+
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
V L + + + + + TP+ YT ++ G+ + G + + ++
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M + PD V++T +++ KAG M A +V M + G S N +TY L+ G CK
Sbjct: 412 MFCK---GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ +D A ELL EM + +QP++ +YN +++G + A+ E A G+ +
Sbjct: 469 EGDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
+YTTLM A+ SG+ A + EM+ ++ ++ +N+L+ G+C G
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA--GRDREN 623
G P+ T+ S + A ++ ++ R G+ EN
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 208/477 (43%), Gaps = 39/477 (8%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
GY P V ++S VV+ G+ + L + R+ K P++ + +++
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK-----------PNSYIYGSIIG 324
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDRKDLLVFVLERILEQNVP 281
+ F EM + G++PD + Y ++ C R D + F E + +++
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDIT 383
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
+ T ++++ + GD+ A + M C+ G + DSV L
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEM------FCK----------GLEPDSVTFTEL 427
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N ++ ++ +PN YTTL+ G K G + +L M +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK--- 484
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
P+ +Y ++V+ L K+G ++ A +++ E G++A+ +TY L+ YCK ++DK
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A+E+L+EM +QP +V++N+L++G L N M A+GIAP ++ +L+
Sbjct: 545 AQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 522 KAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
K + + K A ++ +M + V D + LV+G+C+ GF
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRE----NSDSSVPPLKPD 634
V TY G +K EA ++++++ A D+E SD+ +PD
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-DKEIFDFFSDTKYKGKRPD 718
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K YTP+ Y+T++ GY + G + +++E M+R+ P+ Y +++ L +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICK 331
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+ A + +EM R G+ + + Y L+ G+CK+ I A + EM +I PDV++Y
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYT 390
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+I G + D A F+EM +G+ P +++T L+ + +G K A RV + M+
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ- 449
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
+++ + L++G C+ G G P++ TY S NG+ + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 604 ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEE 663
A+ L E + AG L D TL D ++ KA EI+ M
Sbjct: 510 AVKLVGEFE---AAG------------LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 664 NGIPPNKTKF 673
G+ P F
Sbjct: 555 KGLQPTIVTF 564
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 125/302 (41%), Gaps = 30/302 (9%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A V M+++G P+V ++ ++ L GD A L + +
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK----------- 484
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
+P+ +N+++N SG+ + ++L E G+ D ++Y +M C+ D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+L+ +L + + + T + L+ + G L+ E ++ M K
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI------------ 592
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
N + F L+ ++ +Y+ + + P+ + Y L+KG+ K+ +
Sbjct: 593 ---APNATTFNSLVKQYCIRNNLKAATAIYK-DMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + M+ + S S +Y+ ++ +K AR+V +M R G++A++ ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVS---TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 448 IL 449
Sbjct: 706 FF 707
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 28/410 (6%)
Query: 236 LFDEMPQFGVVPDALSYNIVMKLCCRKDR-KDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+F E P+ GV + SYNIV+ C+ R K+ +L L+ P + + ++V Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD-VISYSTVVNGY 291
Query: 295 VDFGDLDTAEIIVQAMREKRRD------------LCRILR-----ESNSEYI--GGKNDS 335
FG+LD +++ M+ K LCRI + E+ SE I G D+
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
V L + + + + + TP+ YT ++ G+ + G + + ++
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M + PD V++T +++ KAG M A +V M + G S N +TY L+ G CK
Sbjct: 412 MFCK---GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ +D A ELL EM + +QP++ +YN +++G + A+ E A G+ +
Sbjct: 469 EGDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
+YTTLM A+ SG+ A + EM+ ++ ++ +N+L+ G+C G
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA--GRDREN 623
G P+ T+ S + A ++ ++ R G+ EN
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 208/477 (43%), Gaps = 39/477 (8%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
GY P V ++S VV+ G+ + L + R+ K P++ + +++
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK-----------PNSYIYGSIIG 324
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDRKDLLVFVLERILEQNVP 281
+ F EM + G++PD + Y ++ C R D + F E + +++
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDIT 383
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
+ T ++++ + GD+ A + M C+ G + DSV L
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEM------FCK----------GLEPDSVTFTEL 427
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N ++ ++ +PN YTTL+ G K G + +L M +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK--- 484
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
P+ +Y ++V+ L K+G ++ A +++ E G++A+ +TY L+ YCK ++DK
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A+E+L+EM +QP +V++N+L++G L N M A+GIAP ++ +L+
Sbjct: 545 AQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 522 KAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
K + + K A ++ +M + V D + LV+G+C+ GF
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRE----NSDSSVPPLKPD 634
V TY G +K EA ++++++ A D+E SD+ +PD
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA-DKEIFDFFSDTKYKGKRPD 718
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K YTP+ Y+T++ GY + G + +++E M+R+ P+ Y +++ L +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICK 331
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+ A + +EM R G+ + + Y L+ G+CK+ I A + EM +I PDV++Y
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYT 390
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+I G + D A F+EM +G+ P +++T L+ + +G K A RV + M+
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ- 449
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
+++ + L++G C+ G G P++ TY S NG+ + E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 604 ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEE 663
A+ L E + AG L D TL D ++ KA EI+ M
Sbjct: 510 AVKLVGEFE---AAG------------LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 664 NGIPPNKTKF 673
G+ P F
Sbjct: 555 KGLQPTIVTF 564
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 125/302 (41%), Gaps = 30/302 (9%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A V M+++G P+V ++ ++ L GD A L + +
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK----------- 484
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
+P+ +N+++N SG+ + ++L E G+ D ++Y +M C+ D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+L+ +L + + + T + L+ + G L+ E ++ M K
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI------------ 592
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
N + F L+ ++ +Y+ + + P+ + Y L+KG+ K+ +
Sbjct: 593 ---APNATTFNSLVKQYCIRNNLKAATAIYK-DMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + M+ + S S +Y+ ++ +K AR+V +M R G++A++ ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVS---TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 448 IL 449
Sbjct: 706 FF 707
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 193/440 (43%), Gaps = 32/440 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M +GY P+ ++ ++ L + EA+ L D VA +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI-----------DRMVAKGCQ 218
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD + V+N GD + L ++M Q + P L YN ++ C+ D + +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ + + + + T SL++ ++G A ++ M E R+ N +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE---------RKINPDVF-- 327
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
F L+ + + +Y ++ + P+ Y++L+ G+ R+ + +
Sbjct: 328 ----TFSALIDAFVKEGKLVEAEKLYDE-MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
M E M + PD V+Y T++ K ++ +V EM++ G+ N +TYNIL++
Sbjct: 383 MFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G + D A+E+ +EM D + P++++YN L+DG A+ F ++ +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
PT +Y +++ +G+ + +F + + VK D++A+N ++ G+CR G
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 572 XXXXXXXNGFHPDVGTYGSF 591
+G P+ G Y +
Sbjct: 558 LFKEMKEDGTLPNSGCYNTL 577
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 202/462 (43%), Gaps = 32/462 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M++ GY P++ S++++ S EA+ L D +
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL-----------VDQMFVTGYQ 183
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+T FN +++ + L D M G PD ++Y +V+ C++ DL +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ + + + ++++ + +D A + + M K G
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK----------------GI 287
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + V L + + ++ + P+ ++ L+ ++K G++ + +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M ++ + P V+Y+++++ +D A+Q+ M + +TYN L+K
Sbjct: 348 LYDEMVKR---SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK ++++ E+ REM++ + + V+YNILI G D A F EM + G+
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLV-GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++Y TL+ +G+ + A VF E + +++ + +N+++EG C+ G
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G PDV Y + +G EA L+ E+KE
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 186/461 (40%), Gaps = 77/461 (16%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ +L+A A + + L ++M G+ + +Y+I++ CR+ + L + V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + TL SL+ Y + A +V M ++ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-----------------FVTG 181
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
Y PNT + TL+ G + S+ +
Sbjct: 182 ----------------------------------YQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+++ M + PD V+Y VV+ L K G D A +L +M + + + YN ++
Sbjct: 208 LIDRMVAK---GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CK +D A L +EM E I+P+VV+Y+ LI + A ++M R I
Sbjct: 265 GLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXX 568
P +++ L+ AF G+ A +++DEMV DP + + ++ L+ G+C
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI----VTYSSLINGFCMHDRLDE 379
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSV 628
PDV TY + G ++ E + ++ E+ +R G ++V
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-------NTV 432
Query: 629 PPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+GL +A A EI M +G+PPN
Sbjct: 433 TYNILIQGLF--------QAGDCDMAQEIFKEMVSDGVPPN 465
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 106/230 (46%), Gaps = 5/230 (2%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ D V + M + S P + ++ ++SA+ K D + +M +G+ N
Sbjct: 61 KLDDAVALFGEMVK---SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TY+IL+ +C++ Q+ A +L +M + +P++V+ + L++G + A++ ++
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLG-YEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
M G P +++ TL+ L + A + D MV + DL+ + ++V G C+ G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRG 235
Query: 565 XXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
P V Y + +G+ + +AL L+ E++ +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 197/462 (42%), Gaps = 32/462 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ M++ GY P + S++++ +A+ L D V R
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL-----------VDQMVEMGYR 187
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT F +++ + L D M Q G P+ ++Y +V+ C++ DL + +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ + + ++++ + + +D A + + M K G
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK----------------GI 291
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + V L + + ++ K PN + L+ ++K G+ + +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M ++ + PD +Y ++V+ +D+A+Q+ M + +TYN L+K
Sbjct: 352 LYDDMIKR---SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK +++ EL REM+ + D V+Y LI G D A F +M + G+
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++Y+ L+ +G+ + A VFD M +K+D+ + ++EG C+ G
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G P+V TY + +G+ R EA L ++KE
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 176/436 (40%), Gaps = 73/436 (16%)
Query: 186 EALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGV 245
+A+GLF + V + P FN +L+A A + + L ++M + +
Sbjct: 68 DAIGLFGGM-----------VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 246 VPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEI 305
V +YNI++ CR+ + L + +L ++++ + TL SL+ Y + A
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 306 IVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKP 365
+V M E
Sbjct: 177 LVDQMVE---------------------------------------------------MG 185
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y P+T +TTL+ G + S+ V +++ M ++ P+ V+Y VV+ L K G D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTYGVVVNGLCKRGDTD 242
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +L +M + A+ + +N ++ CK +D A L +EM E I+P+VV+Y+ L
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSL 301
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN--- 542
I + A ++M + I P +++ L+ AF G+ A +++D+M+
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
DP D+ +N LV G+C PDV TY + G +++
Sbjct: 362 DP----DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 603 EALILWNEVKERWEAG 618
+ L+ E+ R G
Sbjct: 418 DGTELFREMSHRGLVG 433
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 161/363 (44%), Gaps = 37/363 (10%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A ++ K M G P+V +S+++S L S G +A L + + KI
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KIN----- 327
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
P+ FNA+++A G +L+D+M + + PD +YN ++ C DR D
Sbjct: 328 ----PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR--DLCRILRESN 325
+ E ++ ++ F D+ T +++ + +R D + RE +
Sbjct: 384 AKQMFEFMVSKDC----------------FPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 326 SEYIGGKNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
+ G D+V + L+ + V++ ++ P+ Y+ L+ G +G
Sbjct: 428 HRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNG 484
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ + + + M++ S D YTT++ + KAG +D + ++ GV N +
Sbjct: 485 KLEKALEVFDYMQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TYN ++ G C + + +A LL++M ED + P+ +YN LI + D A + E
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 505 MRA 507
MR+
Sbjct: 601 MRS 603
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/517 (20%), Positives = 209/517 (40%), Gaps = 86/517 (16%)
Query: 150 LYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAAD 209
L A ++ M+ G P V ++ +++ L G +EA L + V
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-----------VGKG 256
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
D + ++N GD K L L +M + + PD + Y+ ++ C+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
++ +LE+ + + T + ++ + FG A+ +++ M E RE N + +
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE---------REINPDVL 367
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
F L+ S+ + + +L + P+T Y +++ G+ K R D
Sbjct: 368 ------TFNALISASVKEGKLFEAEKLCD-EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
M + M + PD V++ T++ +A +D Q+L E++R G+ AN TYN L
Sbjct: 421 KHMFDLM-------ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G+C+ ++ A++L +EM + PD ++ NIL+ G + AL F
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLEEALELF------- 525
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
E++ ++ +D +A+N+++ G C+
Sbjct: 526 -----------------------------EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVP 629
+G PDV TY +G +A +L++++K+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH------------- 603
Query: 630 PLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
+PD +TL C++A K++E+++ M NG
Sbjct: 604 --EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 46/292 (15%)
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDH--VSYTTVVSALVKAGFMDRARQVLAEMTRI 437
Y KS + D + + M R S P + V V+ V+ D A + +M
Sbjct: 83 YFKS--LDDAIDFFDYMVR-----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR 135
Query: 438 GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG 497
+ N ++NIL+K +C ++ + ++ + QPDVV++N L+ G L D +
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISE 194
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
AL+ F M G ++A AL FD+MV V +I +N L+
Sbjct: 195 ALALFGYMVETG----------FLEAVAL----------FDQMVEIGLTPV-VITFNTLI 233
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
G C G G H DV TYG+ NG+ AL L ++++E
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE---- 289
Query: 618 GRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+KPD + + D + A + + M E GI PN
Sbjct: 290 -----------THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/520 (20%), Positives = 211/520 (40%), Gaps = 86/520 (16%)
Query: 150 LYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAAD 209
L A ++ M+ G P V ++ +++ L G +EA L + + I
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-------- 259
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
D + ++N GD K L L +M + + PD + Y+ ++ C+
Sbjct: 260 ---DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
++ +LE+ + + T + ++ + FG A+ +++ M E RE N + +
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE---------REINPDVL 367
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
F L+ S+ + + +L + P+T Y +++ G+ K R D
Sbjct: 368 ------TFNALISASVKEGKLFEAEKLCD-EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
M + M + PD V++ T++ +A +D Q+L E++R G+ AN TYN L
Sbjct: 421 KHMFDLM-------ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G+C+ ++ A++L +EM + PD ++ NIL+ G + AL F
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLEEALELF------- 525
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
E++ ++ +D +A+N+++ G C+
Sbjct: 526 -----------------------------EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVP 629
+G PDV TY +G +A +L++++K+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH------------- 603
Query: 630 PLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+PD +TL C++A K++E+++ M NG +
Sbjct: 604 --EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 46/292 (15%)
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDH--VSYTTVVSALVKAGFMDRARQVLAEMTRI 437
Y KS + D + + M R S P + V V+ V+ D A + +M
Sbjct: 83 YFKS--LDDAIDFFDYMVR-----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR 135
Query: 438 GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG 497
+ N ++NIL+K +C ++ + ++ + QPDVV++N L+ G L D +
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK-LGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
AL+ F M G ++A AL FD+MV V +I +N L+
Sbjct: 195 ALALFGYMVETG----------FLEAVAL----------FDQMVEIGLTPV-VITFNTLI 233
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
G C G G H DV TYG+ NG+ AL L ++++E
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE---- 289
Query: 618 GRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+KPD + + D + A + + M E GI PN
Sbjct: 290 -----------THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 199/469 (42%), Gaps = 45/469 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F +LN A + + L D + GV D + N++M C+ + L
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + T SL+ + ++ A +V M E +G
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE----------------MGI 173
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K D V + +S+ ++ + P+ +YT+L+ G SGR D
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L M ++ PD +++ ++ A VK G A ++ EM R+ ++ N TY L+
Sbjct: 234 LLRGMTKR---KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG---CILVDDSAGALSFFNEMRAR 508
G+C + +D+AR++ M E PDVV+Y LI+G C VDD A+ F EM +
Sbjct: 291 GFCMEGCVDEARQMFYLM-ETKGCFPDVVAYTSLINGFCKCKKVDD---AMKIFYEMSQK 346
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
G+ I+YTTL++ F G+P +A VF MV+ V ++ +N+L+ C G
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKK 405
Query: 569 XXXX---XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSD 625
+G P++ TY +G+ K +AL+++ ++ R RE
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM-------RKREMDI 458
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFT 674
+ +G+ +A + A+ + + G+ PN +T
Sbjct: 459 GIITYTIIIQGM--------CKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 181/406 (44%), Gaps = 26/406 (6%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD F +++N + + + ++M + G+ PD + Y ++ C+ + + +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+++ + + SLV + G A+ +++ M +++
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI---------------- 243
Query: 332 KNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K D + F L+ + + +Y ++ PN YT+L+ G+ G V +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYN-EMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+M M + PD V+YT++++ K +D A ++ EM++ G++ N ITY L+
Sbjct: 303 QMFYLM---ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR-- 508
+G+ + + + A+E+ M + P++ +YN+L+ AL F +M+ R
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 509 -GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
G+AP +Y L+ +G+ + A VF++M + + +I + ++++G C+ G
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM-RKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G P+V TY + +G+ EA +L+ ++KE
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 177/433 (40%), Gaps = 75/433 (17%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A+S + M++ G+ P + ++++++ EA+ + + V +
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM-----------VEMGIK 174
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDL 267
PD + ++++ +G L LFD+M +G+ PD + Y ++ C +D L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
L + +R ++ +V T ++L+ A+V G AE + M +R S +
Sbjct: 235 LRGMTKRKIKPDV----ITFNALIDAFVKEGKFLDAEELYNEM----------IRMSIAP 280
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
I + + ++++ + K P+ YT+L+ G+ K +V
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYL------METKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
D +++ M ++ + + ++YTT++ + G + A++V + M GV N TYN
Sbjct: 335 DAMKIFYEMSQKGLTG---NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Query: 448 ILLKGYCKQLQIDKARELLREMA--EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+LL C ++ KA + +M E + P++ +YN+L+ G AL F +M
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 506 RAR-----------------------------------GIAPTKISYTTLMKAFALSGQP 530
R R G+ P ++YTT++ G
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLK 511
Query: 531 KLAHRVFDEMVND 543
AH +F +M D
Sbjct: 512 HEAHVLFRKMKED 524
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 34/367 (9%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H YA S+ M G P V ++++V+ L +SG +A L R +T+R KI
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR--KI------ 243
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK---DR 264
+PD FNA+++A G +L++EM + + P+ +Y ++ C + D
Sbjct: 244 ---KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 265 KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES 324
+ +++E + + SL+ + +D A I M +K
Sbjct: 301 ARQMFYLME---TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK----------- 346
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
G +++ L Q ++ + PN R Y L+ +G
Sbjct: 347 -----GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
+V + + E M++++ P+ +Y ++ L G +++A V +M + + I
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TY I+++G CK ++ A L + ++P+VV+Y +I G A F +
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 505 MRARGIA 511
M+ G++
Sbjct: 521 MKEDGVS 527
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 188/446 (42%), Gaps = 40/446 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M++ G P + + VV+ L GD AL L L+K+ + AD
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL-------LKKMEKGKIEAD-- 257
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDL 267
+N +++ L LF EM G+ PD +Y+ ++ C D L
Sbjct: 258 --VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
L ++ER + NV T +L+ A+V G L AE + M ++ D
Sbjct: 316 LSDMIERKINPNV----VTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------- 360
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+ + L+ +++ ++ K PN Y+TL+KG+ K+ RV
Sbjct: 361 ----PDIFTYSSLINGFCMHDRLDEAKHMFEL-MISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ +E R + V+YTT++ +A D A+ V +M +GV N +TYN
Sbjct: 416 EG---MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
ILL G CK ++ KA ++ E + + ++PD+ +YNI+I+G F +
Sbjct: 473 ILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
+G++P I+Y T++ F G + A + +M D + + +N L+ R G
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP-NSGTYNTLIRARLRDGDRE 590
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFAN 593
GF D T G N
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 187/445 (42%), Gaps = 72/445 (16%)
Query: 187 ALGLFRAVTR-RLRKITDPDVAAD-------SRP--DTGAFNAVLNACANSGDGKMFLQL 236
A G +R + R RL I D A D SRP FN +L+A A ++ + L
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 237 FDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVD 296
++M G+ D +Y+I + CR+ + L + VL ++++ + TL SL+ Y
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 297 FGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXV 356
+ A +V M E
Sbjct: 166 SKRISDAVALVDQMVEM------------------------------------------- 182
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y P+T +TTL+ G + S+ V +++ M ++ PD V+Y TVV+
Sbjct: 183 --------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVN 231
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
L K G +D A +L +M + + A+ + YN ++ G CK +D A L EM ++ I+
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIR 290
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
PDV +Y+ LI + A ++M R I P ++++ L+ AF G+ A ++
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 537 FDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
+DEM+ DP D+ ++ L+ G+C P+V TY +
Sbjct: 351 YDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 594 GIALARKPGEALILWNEVKERWEAG 618
G A++ E + L+ E+ +R G
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVG 431
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 196/462 (42%), Gaps = 32/462 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M++ GY P + S++++ S +A+ L D V +
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL-----------VDQMVEMGYK 185
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT F +++ + L D+M Q G PD ++Y V+ C++ DL + +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+++ + + + ++++ + +D A + M K G
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK----------------GI 289
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ D L + + ++ + PN ++ L+ ++K G++ + +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M ++ + PD +Y+++++ +D A+ + M N +TY+ L+K
Sbjct: 350 LYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK ++++ EL REM++ + + V+Y LI G D A F +M + G+
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++Y L+ +G+ A VF E + ++ D+ +N+++EG C+ G
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G P+V Y + +G EA L ++KE
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 219/535 (40%), Gaps = 54/535 (10%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G+ P V +A++ + SG+ V + + +R KI PD FN ++N
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR--KIC---------PDVATFNILIN 241
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
G + L +M + G P ++YN V+ C+K R + +L+ + + V
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLP 342
+ T + L+ + ++++ MR+ R++ N+ + L+
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRK------RMIHP---------NEVTYNTLIN 346
Query: 343 NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
N+ + +L +PN + L+ G++ G + ++M M + +
Sbjct: 347 GFSNEGKVLIASQLLNE-MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
P VSY ++ L K D AR M R GV RITY ++ G CK +D+A
Sbjct: 406 ---PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
LL EM++D I PD+V+Y+ LI+G V A + G++P I Y+TL+
Sbjct: 463 VVLLNEMSKDG-IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 523 AFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFH 582
G K A R+++ M+ + + D +N+LV C+ G +G
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 583 PDVGTYGSFANGIALARKPGEALILWNE----------------VKERWEAGRDRE---- 622
P+ ++ NG + + +A +++E +K + G RE
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 623 -NSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
S +VP D + +TL ++ KA+ + M + I P+ +T +
Sbjct: 641 LKSLHAVPA-AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 192/483 (39%), Gaps = 36/483 (7%)
Query: 149 TLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA 208
L A+ ++ ML G P+ ++A++ S G+ EAL +F + A
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME-----------AK 402
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
P ++ +L+ + + + + M + GV ++Y ++ C+ D
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA-EIIVQAMREKRR-----------D 316
V +L + + + + T +L+ + G TA EI+ + R +
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 317 LCRI--LRESNSEYI-----GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPN 369
CR+ L+E+ Y G D +L S+ ++ + + PN
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
T + L+ GY SG + + M + HP +Y +++ L K G + A +
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTK---VGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
L + + + + + YN LL CK + KA L EM + + I PD +Y LI G
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS-ILPDSYTYTSLISGL 698
Query: 490 ILVDDSAGALSFFNEMRARG-IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ A+ F E ARG + P K+ YT + +GQ K A F E +++
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTP 757
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
D++ N +++GY R+G P++ TY +G + + + +L+
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 609 NEV 611
+
Sbjct: 818 RSI 820
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 163/413 (39%), Gaps = 66/413 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + ++M+ G+ ++ +V+ L +G EA R +T +
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT-----------SDGIL 580
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+T +F+ ++N NSG+G +FDEM + G P +Y ++K C+
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG--------- 631
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
G L AE ++++ +
Sbjct: 632 --------------------------GHLREAEKFLKSLHA----------------VPA 649
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D+V L +M +S ++ + P++ YT+L+ G + G+ +
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT--VIA 707
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L A + P+ V YT V + KAG +M +G + + +T N ++
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY + +I+K +LL EM + P++ +YNIL+ G D + + + + GI
Sbjct: 768 GYSRMGKIEKTNDLLPEMG-NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
P K++ +L+ S ++ ++ + V+VD +NML+ C G
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRG-VEVDRYTFNMLISKCCANG 878
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 169/439 (38%), Gaps = 26/439 (5%)
Query: 160 LRSGYLPHVKAWSAVVSRLASSG--DSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAF 217
L G+ +K V R+ +G D + G L +++ + PD +
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI----DPDIVTY 481
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
+A++N G K ++ + + G+ P+ + Y+ ++ CCR + + E ++
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVF 337
+ T + LV + G + AE ++ M IL N F
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG-----IL----------PNTVSF 586
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
L+ N V+ + + P Y +L+KG K G + + + L+++
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDE-MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
+ D V Y T+++A+ K+G + +A + EM + + + TY L+ G C++
Sbjct: 646 AVPAAV---DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+ A +E + P+ V Y +DG + F +M G P ++
Sbjct: 703 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 762
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
++ ++ G+ + + + EM N +L +N+L+ GY +
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 578 XNGFHPDVGTYGSFANGIA 596
NG PD T S GI
Sbjct: 822 LNGILPDKLTCHSLVLGIC 840
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/532 (19%), Positives = 201/532 (37%), Gaps = 93/532 (17%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVT---------------- 195
A ++ M G LP+ ++ +++ +SG+ ++A +F +T
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 196 --------RRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
R K A + DT +N +L A SG+ + LF EM Q ++P
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 248 DALSYNIVMKLCCRKDRKDL-LVFVLERILEQNVPLCMTTLHSLVAAYVDFG-------- 298
D+ +Y ++ CRK + + ++F E NV V G
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 299 -----------DLDTAEIIVQAMR-----EKRRDLCRILRESNSEYIGGKNDSVFQKLLP 342
D+ T ++ EK DL + N GG N + + LL
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN----GGPNLTTYNILLH 802
Query: 343 NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
+ +Y+ +L P+ +L+ G +S + +++L+A +
Sbjct: 803 GYSKRKDVSTSFLLYRSIIL-NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR--- 858
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
D ++ ++S G ++ A ++ MT +G+S ++ T + ++ + + ++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
R +L EM++ I P+ Y LI+G V D A EM A I P ++ + +++
Sbjct: 919 RMVLHEMSKQG-ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 523 AFALSGQPKLAHRVFDEMV----------------------------------NDPRVKV 548
A A G+ A + M+ ++ +K+
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
DL+++N+L+ G C G +GF + TY + G+ LAR+
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL-LARE 1088
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 40/263 (15%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N +Y L++ Y++ G + D+ LE R +P + ++ ++VK+G
Sbjct: 162 NPSVYDILIRVYLREGMIQDS---LEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 429 QVLAEMTRIGVSANRITYNIL-----------------------------------LKGY 453
L EM + + + T+NIL L Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
CK+ + A ELL M + DV +YN+LI + A +MR R I P
Sbjct: 279 CKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
+++Y TL+ F+ G+ +A ++ +EM++ + + + +N L++G+ G
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 574 XXXXXNGFHPDVGTYGSFANGIA 596
G P +YG +G+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLC 419
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 194/421 (46%), Gaps = 27/421 (6%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ VL+ A S + + + LF M G+ D SYNIV+ CR R + + V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK--RRDL----------CR 319
+ ++++ + T+ SL+ + + A +V M E R D+ C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 320 ILRESNS-------EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
I +++ E G + D+V L + S ++ + PN
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+T ++ ++K G+ S+ +++ E M R+ PD +Y ++++ L G +D A+Q+L
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRR---CVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M G + +TYN L+ G+CK ++D+ +L REMA+ + D ++YN +I G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV-GDTITYNTIIQGYFQA 362
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A F+ M +R P +Y+ L+ ++ + + A +F+ M +++D+
Sbjct: 363 GRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELDITT 418
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+N+++ G C++G G PDV +Y + +G R+ ++ +L+ +++
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 613 E 613
E
Sbjct: 479 E 479
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 171/395 (43%), Gaps = 40/395 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A SVV M++ GY P V S++++ +A+ L + R
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE-----------MGFR 171
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYN-IVMKLCCRKDRKDLLVF 270
PD +N +++ G ++LFD M + GV DA++YN +V LCC D
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES--NSEY 328
+ + ++ VP + T +++ +V G A + + M + D S N
Sbjct: 232 MRDMVMRDIVPN-VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
+ G+ D Q L ++ K P+ Y TL+ G+ KS RV +
Sbjct: 291 MHGRVDEAKQML------------------DLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
++ M ++ D ++Y T++ +AG D A+++ + M N TY+I
Sbjct: 333 GTKLFREMAQR---GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
LL G C +++KA L M + +EI+ D+ +YNI+I G + + A F + +
Sbjct: 387 LLYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
G+ P +SYTT++ F Q + ++ +M D
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
R S V L + + PD V+ +++++ + + A ++++M +G + +
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
YN ++ G CK ++ A EL M D ++ D V+YN L+ G + A +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDG-VRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYC 561
M R I P I++T ++ F G+ A ++++EM DP D+ +N L+ G C
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP----DVFTYNSLINGLC 290
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAG 618
G G PDV TY + NG +++ E L+ E+ +R G
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N R YT L+ G K+G M E M Q+D P+ +Y V++ L K G A
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKM--QEDGV-FPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
QV EM GVS N +TYN L+ G C+++++++A +++ +M D I P++++YN LIDG
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG-INPNLITYNTLIDG 347
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
V ALS ++++RG++P+ ++Y L+ F G A ++ EM + +K
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKP 406
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
+ + +L++ + R G PDV TY +G + + EA L+
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLA-DICVRAAFFRKALEIVACMEENGIP 667
+ E+ +P+E + +T+ C + +R AL+++ MEE +
Sbjct: 467 KSMVEK---------------NCEPNEVIYNTMILGYCKEGSSYR-ALKLLKEMEEKELA 510
Query: 668 PNKTKFTRIYVEMHSRMFTSKHASR 692
PN + R +E+ + SK A R
Sbjct: 511 PNVASY-RYMIEVLCKERKSKEAER 534
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 20/297 (6%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ L+KG ++G + + +L + + P+ V YTT++ K G +++A+ +
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELT---EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM ++G+ AN TY +L+ G K + E+ +M ED + P++ +YN +++
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG-VFPNLYTYNCVMNQLCKD 281
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
+ A F+EMR RG++ ++Y TL+ + A++V D+M +D + +LI
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG-INPNLIT 340
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+N L++G+C +G G P + TY +G A + E++
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 613 ERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
ER +KP + L D R+ KA+++ MEE G+ P+
Sbjct: 401 ER---------------GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 25/359 (6%)
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
+++ NS QS Y ++ + P + + L+ + S + +
Sbjct: 98 EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGS----SSFNQWWSFFN 153
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
++ S D S+ ++ +AG ++++ +L E+T G S N + Y L+ G CK+ +
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
I+KA++L EM + + + +Y +LI+G + +M+ G+ P +Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANE-RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
+M G+ K A +VFDEM + V +++ +N L+ G CR
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 579 NGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLL 638
+G +P++ TY + +G K G+AL L ++K R L P
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR---------------GLSPSLVTY 376
Query: 639 DTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDR 697
+ L R A ++V MEE GI P+K +T I ++ +R S + +A Q R
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT-ILIDTFAR---SDNMEKAIQLR 431
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 168/389 (43%), Gaps = 34/389 (8%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G+ P+V ++ ++ G+ +A LF + + + A+ R + ++N
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL-------GLVANER----TYTVLIN 241
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
+G K +++++M + GV P+ +YN VM C+ R V + + E+ V
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLP 342
+ T ++L+ L+ A +V M+ + N + L+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN---------------PNLITYNTLID 346
Query: 343 NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
+ + L + +P+ Y L+ G+ + G S +M++ M ++
Sbjct: 347 GFCGVGKLGKALSLCRD-LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM---EER 402
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
P V+YT ++ ++ M++A Q+ M +G+ + TY++L+ G+C + Q+++A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
L + M E +P+ V YN +I G S AL EM + +AP SY +++
Sbjct: 463 SRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 523 AFALSGQPKLAHRVFDEMVN---DPRVKV 548
+ K A R+ ++M++ DP +
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSI 550
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 192/446 (43%), Gaps = 40/446 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ M+ G P + + VV+ L GD AL L L+K+ + AD
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL-------LKKMEKGKIEAD-- 254
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDL 267
+ +++A N + L LF EM G+ P+ ++YN +++ C D L
Sbjct: 255 --VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
L ++ER + NV T +L+ A+V G L AE + M ++ D
Sbjct: 313 LSDMIERKINPNV----VTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------- 357
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+ + L+ +++ ++ K PN Y TL+KG+ K+ RV
Sbjct: 358 ----PDIFTYSSLINGFCMHDRLDEAKHMFEL-MISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ +E R + V+Y T++ L +AG D A+++ +M GV + ITY+
Sbjct: 413 EG---MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
ILL G CK +++KA ++ E + ++++PD+ +YNI+I+G F +
Sbjct: 470 ILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
+G+ P I YTT++ F G + A +F EM D + + +N L+ R G
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP-NSGTYNTLIRARLRDGDKA 587
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFAN 593
GF D T N
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVIN 613
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 204/474 (43%), Gaps = 56/474 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M++ GY P + S++++ EA+ L D + +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL-----------VDQMFVMEYQ 182
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+T FN +++ + L D M G PD +Y V+ C++ DL + +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
L+++ + + + +++ A ++ +++ A + M K R LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 320 ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKG 379
R S++ +LL + ++ + PN ++ L+
Sbjct: 303 YGRWSDA-----------SRLLSD-----------------MIERKINPNVVTFSALIDA 334
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
++K G++ + ++ + M ++ + PD +Y+++++ +D A+ + M
Sbjct: 335 FVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
N +TYN L+KG+CK ++++ EL REM++ + + V+YN LI G D A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
F +M + G+ P I+Y+ L+ G+ + A VF E + +++ D+ +N+++EG
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYLQKSKMEPDIYTYNIMIEG 509
Query: 560 YCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
C+ G G P+V Y + +G EA L+ E+KE
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 185/444 (41%), Gaps = 42/444 (9%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
+ LF EM Q +P + +N ++ + ++ DL++ + ER+ + + + + L+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXX 353
+ L A ++ M + +G + D V L N
Sbjct: 125 FCRRSQLPLALAVLGKMMK----------------LGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 354 XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTT 413
+ Y PNT + TL+ G + S+ V +++ M + PD +Y T
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR---GCQPDLFTYGT 225
Query: 414 VVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA 473
VV+ L K G +D A +L +M + + A+ + Y ++ C ++ A L EM ++
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNK 284
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
I+P+VV+YN LI + A ++M R I P ++++ L+ AF G+ A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 534 HRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
+++DEM+ DP D+ ++ L+ G+C P+V TY +
Sbjct: 345 EKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 591 FANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAF 650
G A++ E + L+ E+ +R G ++V +GL D +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVG-------NTVTYNTLIQGLFQA-GDCDMAQKI 452
Query: 651 FRKALEIVACMEENGIPPNKTKFT 674
F+K M +G+PP+ ++
Sbjct: 453 FKK-------MVSDGVPPDIITYS 469
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P V + ++SA+ K D + M + +S + +YNIL+ +C++ Q+ A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 466 LREMAEDA----------------------------------EIQPDVVSYNILIDGCIL 491
L +M + E QP+ V++N LI G L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+ ++ A++ + M ARG P +Y T++ G LA + +M +++ D++
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVV 256
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
+ +++ C G P+V TY S + + +A L +++
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 612 KERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKT 671
ER + P+ L D V+ +A ++ M + I P+
Sbjct: 317 IER---------------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 672 KFTRIY--VEMHSRMFTSKH 689
++ + MH R+ +KH
Sbjct: 362 TYSSLINGFCMHDRLDEAKH 381
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 214/528 (40%), Gaps = 91/528 (17%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M++ GY P + S++++ S +A+ L D V +
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL-----------VDQMVEMGYK 185
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT F +++ + L D+M Q G PD ++Y V+ C++ DL + +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ + + ++++ + + ++ A + M
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME-------------------- 285
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K PN Y +L+ GR SD R
Sbjct: 286 -------------------------------TKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L M + +P+ V++ ++ A K G + A ++ EM + + + ITYN+L+
Sbjct: 315 LLSNMLEK---KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG---CILVDDSAGALSFFNEMRAR 508
G+C ++D+A+++ + M + P++ +YN LI+G C V+D + F EM R
Sbjct: 372 GFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVED---GVELFREMSQR 427
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
G+ ++YTT+++ F +G A VF +MV++ RV D++ +++L+ G C G
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLHGLCSYGKLDT 486
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSV 628
+ ++ Y + G+ A K GEA L+ +
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----------------- 529
Query: 629 PPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
+KPD +T+ ++A ++ M+E+G PN + +
Sbjct: 530 -SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 185/445 (41%), Gaps = 72/445 (16%)
Query: 187 ALGLFRAVTR-RLRKITDPDVAAD-------SRP--DTGAFNAVLNACANSGDGKMFLQL 236
A G +R + R RL I D A D SRP FN +L+A A ++ + L
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 237 FDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVD 296
++M G+ D +Y+I + CR+ + L + VL ++++ + TL SL+ Y
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 297 FGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXV 356
+ A +V M E
Sbjct: 166 SKRISDAVALVDQMVEM------------------------------------------- 182
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y P+T +TTL+ G + S+ V +++ M ++ PD V+Y TVV+
Sbjct: 183 --------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVN 231
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
L K G +D A +L +M + AN + +N ++ CK ++ A +L EM E I+
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIR 290
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
P+VV+YN LI+ + A + M + I P +++ L+ AF G+ A ++
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 537 FDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
+EM+ DP D I +N+L+ G+C P++ TY + N
Sbjct: 351 HEEMIQRSIDP----DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 594 GIALARKPGEALILWNEVKERWEAG 618
G ++ + + L+ E+ +R G
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVG 431
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 160/376 (42%), Gaps = 36/376 (9%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A + M G P+V ++++++ L + G +A R ++ L K +P+V
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA---SRLLSNMLEKKINPNVV 329
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
FNA+++A G +L +EM Q + PD ++YN+++ C +R D
Sbjct: 330 T--------FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ + ++ ++ + T ++L+ + ++ D + RE +
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKC--------------KRVEDGVELFREMSQR 427
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+ G N + ++ V++ ++ + Y+ L+ G G++
Sbjct: 428 GLVG-NTVTYTTIIQGFFQAGDCDSAQMVFKQ-MVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + +++ S + Y T++ + KAG + A + ++ + + +TYN
Sbjct: 486 TALVIFKYLQK---SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYN 539
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
++ G C + + +A +L R+M ED + P+ +YN LI + D A + EMR+
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 508 RGIA--PTKISYTTLM 521
G + IS T M
Sbjct: 599 SGFVGDASTISLVTNM 614
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 186/464 (40%), Gaps = 32/464 (6%)
Query: 150 LYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAAD 209
L+A SV+ + GY P +S +V+ G EA+ L D V
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL-----------VDRMVEMK 170
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
RPD + ++N G L L D M ++G PD ++Y V+ C+ L +
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+ ++ E+N+ + ++ + G D A + M K
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK---------------- 274
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G K D V L + ++ + P+ ++ L+ ++K G++ +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ M + PD ++Y +++ K + A Q+ M G + +TY+IL
Sbjct: 335 KELYNEMITR---GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ YCK ++D L RE++ I P+ ++YN L+ G A F EM +RG
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
+ P+ ++Y L+ +G+ A +F++M R+ + + +N+++ G C
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G PDV TY G+ EA +L+ ++KE
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 176/411 (42%), Gaps = 36/411 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRK--ITDPDVAAD 209
A ++ M+ G+ P + V++RL SG+S AL LFR + R K + + D
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
S G+F+ L+ LF+EM G+ D ++Y+ ++ C + D
Sbjct: 254 SLCKDGSFDDALS-------------LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+L ++ +N+ + T +L+ +V G L A+ + M +
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR---------------- 344
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G D++ L + + ++ K P+ Y+ L+ Y K+ RV D
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+R+ R P+ ++Y T+V ++G ++ A+++ EM GV + +TY IL
Sbjct: 405 MRLF---REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
L G C +++KA E+ +M + + + + YNI+I G A S F + +G
Sbjct: 462 LDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+ P ++Y ++ G A +F +M D D +N+L+ +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF-TYNILIRAH 570
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 185/450 (41%), Gaps = 40/450 (8%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF-VLERI 275
FN + +A A + + L M G+ D + I++ CRK +K L F VL R
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK-KKLLFAFSVLGRA 131
Query: 276 LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDS 335
+ T +LV + G + A +V M E ++ + D
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ----------------RPDL 175
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
V L N + V ++ + P+ Y ++ KSG ++ L+
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG---NSALALDL 232
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
R+ ++ V Y+ V+ +L K G D A + EM G+ A+ +TY+ L+ G C
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ D ++LREM I PDVV+++ LID + A +NEM RGIAP I
Sbjct: 293 DGKWDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
+Y +L+ F A+++FD MV+ + D++ +++L+ YC+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDE 635
G P+ TY + G + K A L+ E+ R VPP
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR------------GVPPSVVTY 458
Query: 636 G-LLDTLADICVRAAFFRKALEIVACMEEN 664
G LLD L D KALEI M+++
Sbjct: 459 GILLDGLCD----NGELNKALEIFEKMQKS 484
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/342 (18%), Positives = 129/342 (37%), Gaps = 78/342 (22%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLF-RAVTRRL------------ 198
A +++ M+ +P V +SA++ G +EA L+ +TR +
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 199 -----------RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
++ D V+ PD ++ ++N+ + ++LF E+ G++P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
+ ++YN ++ C+ + + + + ++ + VP + T L+ D G+L+ A I
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
+ M++ R T
Sbjct: 479 EKMQKSR---------------------------------------------------MT 487
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
IY ++ G + +V D + ++ D PD V+Y ++ L K G + A
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSL---SDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
+ +M G + + TYNIL++ + + + EL+ EM
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 189/436 (43%), Gaps = 24/436 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P FN +L+A + + L +M G+ D ++NIV+ C + L + +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
L ++L+ T+ SLV + + A +V M E LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 320 ILRESNS-------EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
R +++ E G + + V L N + S ++ K TPN
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y+ L+ ++K+G+V + + E M R + PD V+Y+++++ L +D A Q+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRM---SIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M G A+ ++YN L+ G+CK +++ +L REM++ + + V+YN LI G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQA 378
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
D A FF++M GI+P +Y L+ +G+ + A +F++M + +D++
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIVT 437
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+ ++ G C+ G G PD+ TY + +G+ E L+ ++K
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 613 ERWEAGRDRENSDSSV 628
+ D SD +
Sbjct: 498 QEGLMKNDCTLSDGDI 513
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 195/462 (42%), Gaps = 32/462 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ M++ GY P + S++++ +A+ L D V R
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL-----------VDQMVEMGYR 112
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT F +++ + L D M Q G P+ ++Y +V+ C++ DL +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ + + ++++ + + +D A + + M K G
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK----------------GI 216
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + V L + + ++ K PN + L+ ++K G+ + +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M ++ + PD +Y ++++ +D+A+Q+ M + TYN L+K
Sbjct: 277 LHDDMIKR---SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK +++ EL REM+ + D V+Y LI G D A F +M + G+
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++Y+ L+ +G+ + A VFD M +K+D+ + ++EG C+ G
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G P+V TY + +G+ R EA L ++KE
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 168/410 (40%), Gaps = 62/410 (15%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P FN +L+A A + + L ++M + G+ + +YNI++ CR+ + L + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + TL SL+ Y + A +V M E
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE------------------- 108
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
Y P+T +TTL+ G + S+ V
Sbjct: 109 --------------------------------MGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+++ M ++ P+ V+Y VV+ L K G +D A +L +M + A+ + +N ++
Sbjct: 137 LVDRMVQR---GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
CK +D A L +EM E I+P+VV+Y+ LI + A ++M + I
Sbjct: 194 SLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXX 568
P +++ L+ AF G+ A ++ D+M+ DP D+ +N L+ G+C
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP----DIFTYNSLINGFCMHDRLDK 308
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAG 618
PD+ TY + G +++ + L+ E+ R G
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 161/363 (44%), Gaps = 37/363 (10%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A ++ K M G P+V +S+++S L S G +A L + + KI
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KIN----- 252
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
P+ FNA+++A G +L D+M + + PD +YN ++ C DR D
Sbjct: 253 ----PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR--DLCRILRESN 325
+ E ++ ++ F DLDT +++ + +R D + RE +
Sbjct: 309 AKQMFEFMVSKDC----------------FPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 326 SEYIGGKNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
+ G D+V + L+ + V++ ++ P+ Y+ L+ G +G
Sbjct: 353 HRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNG 409
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ + + + M++ S D YTT++ + KAG +D + ++ GV N +
Sbjct: 410 KLEKALEVFDYMQK---SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TYN ++ G C + + +A LL++M ED + PD +YN LI + D A + E
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 505 MRA 507
MR+
Sbjct: 526 MRS 528
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 216/502 (43%), Gaps = 71/502 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M++ GY P + +++++ +A+ L + V +
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-----------VEMGYQ 183
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD+ FN +++ + L D M G PD ++Y IV+ C++ DL + +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
L+++ + + + ++++ A ++ +++ A + M K R LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 320 ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKG 379
R S++ +LL + ++ + PN ++ L+
Sbjct: 304 YGRWSDA-----------SRLLSD-----------------MIERKINPNVVTFSALIDA 335
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
++K G++ + ++ + M ++ + PD +Y+++++ +D A+ + M
Sbjct: 336 FVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
N +TYN L+KG+CK ++D+ EL REM++ + + V+Y LI G + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV-GNTVTYTTLIHGFFQARECDNAQ 451
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
F +M + G+ P ++Y+ L+ +G+ + A VF E + +++ D+ +N+++EG
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEG 510
Query: 560 YCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGR 619
C+ G G P+V TY + +G EA L+ E+KE
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE----- 565
Query: 620 DRENSDSSVPPLKPDEGLLDTL 641
PL PD G +TL
Sbjct: 566 ---------GPL-PDSGTYNTL 577
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 169/410 (41%), Gaps = 62/410 (15%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ +L+A A + + L ++M G+ + +Y+I++ CR+ + L + V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + TL+SL+ + + A +V M E
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE------------------- 179
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
Y P++ + TL+ G + R S+ V
Sbjct: 180 --------------------------------MGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+++ M + PD V+Y VV+ L K G +D A +L +M + + + YN ++
Sbjct: 208 LVDRMVVK---GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
C ++ A L EM ++ I+P+VV+YN LI + A ++M R I
Sbjct: 265 ALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXX 568
P ++++ L+ AF G+ A +++DEM+ DP D+ ++ L+ G+C
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDE 379
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAG 618
P+V TY + G A++ E + L+ E+ +R G
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 170/427 (39%), Gaps = 72/427 (16%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M+ G P + + VV+ L GD AL L L+K+ +
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL-------LKKMEQGKI----E 253
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDL 267
P +N +++A N + L LF EM G+ P+ ++YN +++ C D L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
L ++ER + NV T +L+ A+V G L AE + M ++ D
Sbjct: 314 LSDMIERKINPNV----VTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------- 358
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+ + L+ +++ ++ K PN Y TL+KG+ K+ RV
Sbjct: 359 ----PDIFTYSSLINGFCMHDRLDEAKHMFEL-MISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ +E R + V+YTT++ +A D A+ V +M GV + +TY+
Sbjct: 414 EG---MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 448 ILLKGYCKQLQIDKARELLREM------------------------AEDA---------- 473
ILL G C +++ A + + ED
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
++P+VV+Y ++ G A + F EM+ G P +Y TL++A G +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 534 HRVFDEM 540
+ EM
Sbjct: 591 AELIREM 597
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 154/356 (43%), Gaps = 31/356 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M G P+V +++++ L + G +A L + R KI
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER--KIN--------- 323
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ F+A+++A G +L+DEM + + PD +Y+ ++ C DR D +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E ++ ++ + T ++L+ + +D + + M ++ G
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR----------------GL 427
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
++V L + Q+ + ++ P+ Y+ L+ G +G+V +
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E ++R S PD +Y ++ + KAG ++ + ++ GV N +TY ++
Sbjct: 488 VFEYLQR---SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
G+C++ ++A L REM E+ + PD +YN LI + D A + EMR+
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ D V + M + S P V ++ ++SA+ K D + +M +G+S N
Sbjct: 61 KLDDAVNLFGDMVK---SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TY+IL+ +C++ Q+ A +L +M + +PD+V+ N L++G + + A+S +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
M G P ++ TL+ + A + D MV + DL+ + ++V G C+ G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRG 235
Query: 565 XXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
P V Y + + + + +AL L+ E+ +
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 54/397 (13%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +FN+V++ G K + MP+FG PD +SYN
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYN------------------ 95
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
SL+ + GD+ +A ++++++R +C
Sbjct: 96 -----------------SLIDGHCRNGDIRSASLVLESLRASHGFIC------------- 125
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K D V L N ++ VY +L K +PN Y+T + + KSG + ++
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+M+R A P+ V++T ++ KAG ++ A + EM R+ +S N +TY L+
Sbjct: 185 SFHSMKRD---ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK+ ++ +A E+ M ED ++P+ + Y +IDG DS A+ F +M +G+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVED-RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
+Y ++ +G+ K A + ++M V D++ + ++ Y + G
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP-DMVIFTTMMNAYFKSGRMKAAVN 359
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
GF PDV + +GIA + EA++ +
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/517 (20%), Positives = 200/517 (38%), Gaps = 91/517 (17%)
Query: 88 THLPNPTCLSRLVSQLSYHNT-LPSLTRAQSILTRLRNERQLHRLDANSXXXXXXXXXXX 146
++LP+P ++ + QL N + SL +++R HR NS
Sbjct: 16 SNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTP---HRSSFNSVVSFVCKLG-- 70
Query: 147 XHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDV 206
+A +V SM R G P V ++++++ +GD A + ++ I PD+
Sbjct: 71 -QVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI 129
Query: 207 AADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQF-GVV-----PDALSYNIVMKLCC 260
+FN++ N G KM ++ DE+ + GV+ P+ ++Y+ + C
Sbjct: 130 V--------SFNSLFN-----GFSKM--KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 261 RKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRI 320
+ L + + + + T L+ Y GDL+ A + + MR R L
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL--- 231
Query: 321 LRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
N YT L+ G+
Sbjct: 232 ------------------------------------------------NVVTYTALIDGF 243
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
K G + R E R + P+ + YTT++ + G D A + LA+M G+
Sbjct: 244 CKKGEMQ---RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
+ Y +++ G C ++ +A E++ +M E +++ PD+V + +++ A++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDM-EKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD-EMVNDPRVKVDLIAWNMLVEG 559
++++ RG P ++ +T++ A +GQ A F E ND + + +L++
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-------VMYTVLIDA 412
Query: 560 YCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
C+ G G PD Y S+ G+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 160/383 (41%), Gaps = 36/383 (9%)
Query: 158 SMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAF 217
SM R P+V ++ ++ +GD A+ L++ + RR+R + +
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-RRVRM----------SLNVVTY 236
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
A+++ G+ + +++ M + V P++L Y ++ ++ D + L ++L
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVF 337
Q + L +T +++ G L A IV+ M ++ DL D V
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDM--EKSDLVP--------------DMVI 340
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
+ N+ +S L+ + + P+ +T++ G K+G++ + + +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
D V YT ++ AL K G ++ ++++ G+ ++ Y + G CKQ
Sbjct: 401 AND--------VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+ A +L M ++ + D+++Y LI G A F+EM GI+P +
Sbjct: 453 NLVDAFKLKTRMVQEG-LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 518 TTLMKAFALSGQPKLAHRVFDEM 540
L++A+ G A + +M
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDM 534
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 177/398 (44%), Gaps = 26/398 (6%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
QLFDEM ++P ++YN ++ C+ + V ER+ ++ + T ++L+
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Query: 295 VDFGDLDTAEIIVQAMRE--------------------KRRDLCRILRESNSEYIGGKND 334
G ++ AE +++ M++ ++ + + E+ + G K +
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS-GVKMN 353
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+ +L N++ + + K PN IY T++ GY + G + +E
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
AM +Q PDH++Y ++ + G M+ A + + +M GVS + TYNIL+ GY
Sbjct: 414 AMEKQ---GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 455 KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
++ + DK ++L+EM ED P+VVSY LI+ A +M RG++P
Sbjct: 471 RKYEFDKCFDILKEM-EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXX 574
Y L+ G+ + A R EM+ ++++L+ +N L++G G
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 575 XXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
G PDV TY S +G A + L+ E+K
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 185/473 (39%), Gaps = 56/473 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+K M G++P +S + +S+ + ALG++ + A DS
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY-------------ETAVDSG 349
Query: 212 PDTGAFNA--VLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
A+ +LNA G + ++ G+VP+ + YN ++ CRK
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+E + +Q + + L+ + + G+++ AE V M+ K E+ + I
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV---ETYNILI 466
Query: 330 GGKN-----DSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
GG D F L N + PN Y TL+ K
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGT------------------MPNVVSYGTLINCLCKGS 508
Query: 385 RVSDTVRMLEAM---RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
+ +LEA R +D P Y ++ G ++ A + EM + G+
Sbjct: 509 K------LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
N +TYN L+ G ++ +A +LL E++ ++PDV +YN LI G + ++
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
+ EM+ GI PT +Y L+ G +L R+F EM +K DL+ +N ++ Y
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM----SLKPDLLVYNGVLHCYA 676
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G D TY S G K E L +E+ R
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 26/339 (7%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAM--RRQDDSASHPDHVSYTTVVSALVKAGFMD 425
P+ IY L+ G K R++D ++ + M RR P ++Y T++ KAG +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL-----LPSLITYNTLIDGYCKAGNPE 266
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
++ +V M + + IT+N LLKG K ++ A +L+EM +D PD +++IL
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSIL 325
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
DG + + AL + G+ + + L+ A G+ + A + +
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
V ++I +N +++GYCR G G PD Y L R+
Sbjct: 386 VPNEVI-YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN------CLIRR----- 433
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
+ E+ E A ++E + + + P + L R F K +I+ ME+NG
Sbjct: 434 --FCELGEMENA--EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 666 IPPNKTKFTRIY--VEMHSRMFTSKHASRARQDRRVERK 702
PN + + + S++ ++ R +DR V K
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 25/308 (8%)
Query: 382 KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
+S +S+ + A+R + +P S T ++ LVK V +
Sbjct: 121 ESKMISEAADLFFALRNE---GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
++ Y ++ K + K EL M D I P V YN+LIDG A
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHD-RIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
F+EM AR + P+ I+Y TL+ + +G P+ + +V + M D ++ LI +N L++G
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD-HIEPSLITFNTLLKGLF 295
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL---------------- 605
+ G GF PD T+ +G + K AL
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 606 ---ILWNEVKERWEAGRDRENSDSSVPP-LKPDEGLLDTLADICVRAAFFRKALEIVACM 661
IL N + + + + E + L P+E + +T+ D R A + M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 662 EENGIPPN 669
E+ G+ P+
Sbjct: 416 EKQGMKPD 423
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 139/351 (39%), Gaps = 32/351 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFD-EMPQFGVVPDALSYNIVMKLCCRKDR-KDLLV 269
P+ ++ ++N C G + Q+ +M GV P YN+++ CC K + +D
Sbjct: 492 PNVVSYGTLIN-CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
F E +L++ + L + T ++L+ G L AE ++ + K
Sbjct: 551 FSKE-MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK---------------- 593
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G K D L + + + P + Y L+ K G + T
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELT 652
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
R+ M + PD + Y V+ G M++A + +M + ++ TYN L
Sbjct: 653 ERLFGEM------SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G K ++ + R L+ EM E++P+ +YNI++ G V D A ++ EM+ +G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEM-NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDE----MVNDPRVKVDLIAWNML 556
L+ + K A V E M+ D V DL A L
Sbjct: 766 FLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEKL 816
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 182/411 (44%), Gaps = 32/411 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A M R P ++ + ++ R A G + + F+ + + A +R
Sbjct: 211 AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM-----------IGAGAR 259
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +N +++ GD + LF+EM G+VPD ++YN ++ + R D V
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E + + + T ++L+ + FG L I ++ RE + + L+ + Y
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKL---PIGLEFYREMKGN---GLKPNVVSY--- 370
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
++ M Q + + L+P YT YT+L+ K G +SD R
Sbjct: 371 --STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-----YTSLIDANCKIGNLSDAFR 423
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M + + V+YT ++ L A M A ++ +M GV N +YN L+
Sbjct: 424 LGNEMLQ---VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+ K +D+A ELL E+ + I+PD++ Y I G ++ A NEM+ GI
Sbjct: 481 GFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+ YTTLM A+ SG P + DEM + ++V ++ + +L++G C+
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTFCVLIDGLCK 589
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+T Y +++ G+ K GR+ DTV E M+ D PD ++Y +++ K G +
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK---DMCCEPDVITYNALINCFCKFGKLPI 350
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
+ EM G+ N ++Y+ L+ +CK+ + +A + +M + P+ +Y LI
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR-VGLVPNEYTYTSLI 409
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
D + + + A NEM G+ ++YT L+ + + K A +F +M + V
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGV 468
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
+L ++N L+ G+ + G PD+ YG+F G+ K A +
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 607 LWNEVKE 613
+ NE+KE
Sbjct: 529 VMNEMKE 535
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 57/476 (11%)
Query: 157 KSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS------ 210
K M+ +G P V ++ ++ + GD A GLF + + R + V +S
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM--KFRGLVPDTVTYNSMIDGFG 308
Query: 211 --------------------RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDAL 250
PD +NA++N G + L+ + EM G+ P+ +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 251 SYNIVMKLCCRKDR-KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQA 309
SY+ ++ C++ + + F ++ VP T SL+ A G+L A +
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN-EYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 310 MREKRRD------------LCRILRESNSEYIGGKNDSVFQKLLPN--SMN-------QS 348
M + + LC R +E + GK D+ ++PN S N ++
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA--GVIPNLASYNALIHGFVKA 485
Query: 349 XXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDH 408
L + P+ +Y T + G ++ ++ M+ + +
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK---ECGIKANS 542
Query: 409 VSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLRE 468
+ YTT++ A K+G +L EM + + +T+ +L+ G CK + KA +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 469 MAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
++ D +Q + + +IDG + A + F +M +G+ P + +YT+LM G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 529 QPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
A + D+M + +K+DL+A+ LV G G HPD
Sbjct: 663 NVLEALALRDKMA-EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P + + S L+ G ++ A Q ++M R V + N LL + K + D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
++M A +P V +YNI+ID D A F EM+ RG+ P ++Y +++ F
Sbjct: 250 FKDMI-GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
G+ F+EM D + D+I +N L+ +C+ G NG P+V
Sbjct: 309 KVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 586 GTYGSFANGIA 596
+Y + +
Sbjct: 368 VSYSTLVDAFC 378
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 201/471 (42%), Gaps = 39/471 (8%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M + G+ P V ++S V++ LA +G +AL LF ++ R VA PD +N
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER-------GVA----PDVTCYN 223
Query: 219 AVLNACANSGDGKMFLQLFDEMPQ-FGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
+++ D K ++L+D + + V P+ ++NI++ + R D + + ER+ +
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL--------------CRILRE 323
+ T SL+ D G++D AE + + E++ + C ++E
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 324 SNS-----EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLP-KPYTPNTRIYTTLM 377
S E+ N + L+ + +++ L+P K Y + Y +
Sbjct: 344 SLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR--LMPAKGYAADKTTYGIFI 401
Query: 378 KGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRI 437
G +G V+ + L M+ + S H D +Y +++ L K ++ A ++ EM++
Sbjct: 402 HGLCVNGYVN---KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 438 GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG 497
GV N N L+ G + ++ +A LREM ++ +P VVSYNILI G
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG-CRPTVVSYNILICGLCKAGKFGE 517
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
A +F EM G P +Y+ L+ + LA ++ + + ++ D++ N+L+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG-LETDVMMHNILI 576
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
G C +G ++ TY + G A ++W
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 194/482 (40%), Gaps = 44/482 (9%)
Query: 194 VTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYN 253
V +R+R+I + P ++N +LNA + LF GV P+ +YN
Sbjct: 100 VFKRMREIFGCE------PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 254 IVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK 313
+++K+ C+K + L+ + ++ + + +++ G LD A + M E+
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 314 RRDLCRILRESNSEYIGGKND-SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
G D + + L+ + + ++ L PN +
Sbjct: 214 ----------------GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ ++ G K GRV D +++ E M++ + D +Y++++ L AG +D+A V
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNE---REKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
E+ S + +TYN +L G+C+ +I ++ EL R M + ++VSYNILI G +
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLEN 372
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A + M A+G A K +Y + ++G A V E V +D+ A
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE-VESSGGHLDVYA 431
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+ +++ C+ +G + + G+ + GEA
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL---- 487
Query: 613 ERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTK 672
RE + P +L + +C +A F +A V M ENG P+
Sbjct: 488 --------REMGKNGCRPTVVSYNIL--ICGLC-KAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 673 FT 674
++
Sbjct: 537 YS 538
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 171/401 (42%), Gaps = 23/401 (5%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD +++ V+N A +G L+LFDEM + GV PD YNI++ ++ +
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 271 VLERILEQNVPLCMTTLHS-LVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+ +R+LE + H+ +++ G +D I + M++ R+
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE------------- 287
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
K+ + L+ + V+ L + + + Y T++ G+ + G++ ++
Sbjct: 288 --KDLYTYSSLIHGLCDAGNVDKAESVFNE-LDERKASIDVVTYNTMLGGFCRCGKIKES 344
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ + M ++ + VSY ++ L++ G +D A + M G +A++ TY I
Sbjct: 345 LELWRIMEHKNS----VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G C ++KA +++E+ E + DV +Y +ID A + EM G
Sbjct: 401 IHGLCVNGYVNKALGVMQEV-ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
+ L+ + A EM + + ++++N+L+ G C+ G
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG-CRPTVVSYNILICGLCKAGKFGEA 518
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
NG+ PD+ TY G+ RK AL LW++
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
+++K Y K+ + + + MR + P SY T+++A V+A + + A
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMR--EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF 140
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDD 494
GV+ N TYN+L+K CK+ + +KAR L M ++ +PDV SY+ +I+
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGK 199
Query: 495 SAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWN 554
AL F+EM RG+AP Y L+ F K A ++D ++ D V ++ N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 555 MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
+++ G + G N D+ TY S +G+ A +A ++NE+ ER
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 175/453 (38%), Gaps = 77/453 (16%)
Query: 162 SGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVL 221
S P+VK + ++S L+ G + L ++ + + R+ D +++++
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE-----------KDLYTYSSLI 297
Query: 222 NACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR--KDRKDLLVFVLERILEQN 279
+ ++G+ +F+E+ + D ++YN ++ CR K ++ L ++ RI+E
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW---RIMEHK 354
Query: 280 VPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLC--------- 318
+ + + + L+ ++ G +D A +I + M K LC
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 319 RILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK 378
+++E S GG D + + + + + N+ + L+
Sbjct: 415 GVMQEVESS--GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
G ++ R+ + L M + + P VSY ++ L KAG A + EM G
Sbjct: 473 GLIRDSRLGEASFFLREMGK---NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREM----------------------------- 469
+ TY+ILL G C+ +ID A EL +
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 470 -----AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
E ++V+YN L++G V DS A + M G+ P ISY T+MK
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
+ A FD+ N + + WN+LV
Sbjct: 650 CMCRGVSYAMEFFDDARNHG-IFPTVYTWNILV 681
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 20/290 (6%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
L + E+ G D +Y ++ C+K R + +++ + + V L ++L+
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXX 353
+ L A +RE ++ CR S + I G + ++
Sbjct: 474 LIRDSRLGEASFF---LREMGKNGCRPTVVSYNILICG-------------LCKAGKFGE 517
Query: 354 XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTT 413
+ +L + P+ + Y+ L+ G + ++ LE + S D + +
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID---LALELWHQFLQSGLETDVMMHNI 574
Query: 414 VVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA 473
++ L G +D A V+A M +AN +TYN L++G+ K ++A + M +
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA 523
+QPD++SYN ++ G + + A+ FF++ R GI PT ++ L++A
Sbjct: 635 -LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 157/339 (46%), Gaps = 23/339 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD +N +L+ N G ++ EM + G+VPD++SYNI+++ C ++
Sbjct: 292 QPDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ +++Q + T ++L+ ++ AEI+++ +REK G
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK----------------G 392
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
DSV +L N Q ++ P YT+L+ + + +
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ E + + PD V T++ G MDRA +L EM + ++ + +TYN L+
Sbjct: 453 ELFEKVVGK---GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
+G C + + ++AREL+ EM I+PD +SYN LI G D+ A +EM + G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
PT ++Y L+K + + + +LA + EM ++ V D
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 167/379 (44%), Gaps = 50/379 (13%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
++ M G+ P ++ ++ ++S + + G + E L R +++I PD+
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL-------REMKEI-------GLVPDS 327
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
++N ++ C+N+GD +M DEM + G+VP +YN ++ +++ + ++
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEII--------VQAMREKRRDLCRILRESNS 326
I E+ + L T + L+ Y GD A + +Q + L +L N
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
+ D +F+K++ M P+ + TLM G+ G +
Sbjct: 448 TR---EADELFEKVVGKGMK---------------------PDLVMMNTLMDGHCAIGNM 483
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY 446
+L+ M D + +PD V+Y ++ L G + AR+++ EM R G+ + I+Y
Sbjct: 484 DRAFSLLKEM---DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 447 NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMR 506
N L+ GY K+ A + EM P +++YN L+ G + A EM+
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLG-FNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 507 ARGIAPTKISYTTLMKAFA 525
+ GI P S+ ++++A +
Sbjct: 600 SEGIVPNDSSFCSVIEAMS 618
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 26/311 (8%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P V+Y T+V G ++ AR +++EM G + TYN +L C + +A E+
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEV 314
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
LREM E + PD VSYNILI GC D A ++ +EM +G+ PT +Y TL+
Sbjct: 315 LREMKEIGLV-PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+ + + A + E + + + +D + +N+L+ GYC+ G +G P
Sbjct: 374 MENKIEAAEILIRE-IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 586 GTYGSFANGIALARKPGEA---------------LILWNEVKERWEA--GRDRENS---D 625
TY S + K EA L++ N + + A DR S +
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMF 685
+ + PD+ + L F +A E++ M+ GI P+ + + + +S+
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL-ISGYSKKG 551
Query: 686 TSKHASRARQD 696
+KHA R +
Sbjct: 552 DTKHAFMVRDE 562
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 184/454 (40%), Gaps = 35/454 (7%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M G+ P + + +++ L S + +E +F A R+ + + + FN
Sbjct: 181 MKEKGFYPKTETCNHILT-LLSRLNRIENAWVFYADMYRM----------EIKSNVYTFN 229
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++N G K M FG+ P ++YN +++ + R + ++ + +
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
M T + +++ + G A +++ M+E IG DSV
Sbjct: 290 GFQPDMQTYNPILSWMCNEG---RASEVLREMKE----------------IGLVPDSVSY 330
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
+L + + Y+ ++ + P Y TL+ G ++ ++ +R
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+ D V+Y +++ + G +A + EM G+ + TY L+ C++ +
Sbjct: 391 KGIVL---DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+A EL ++ ++PD+V N L+DG + + A S EM I P ++Y
Sbjct: 448 TREADELFEKVVGKG-MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
LM+ G+ + A + EM +K D I++N L+ GY + G
Sbjct: 507 CLMRGLCGEGKFEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Query: 579 NGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
GF+P + TY + G++ ++ A L E+K
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
+E + +P + +++ L + ++ A A+M R+ + +N T+NI++
Sbjct: 175 IECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINV 234
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
CK+ ++ KA+ L M E I+P +V+YN L+ G L GA +EM+++G P
Sbjct: 235 LCKEGKLKKAKGFLGIM-EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+Y ++ G+ R E+ P D +++N+L+ G G
Sbjct: 294 DMQTYNPILSWMCNEGRASEVLREMKEIGLVP----DSVSYNILIRGCSNNGDLEMAFAY 349
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G P TY + +G+ + K A IL E++E+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 195/463 (42%), Gaps = 35/463 (7%)
Query: 149 TLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA 208
T AA +++ + SG +P V ++ ++S +G+ AL + R PDV
Sbjct: 153 TRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD------RMSVSPDVVT 206
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
+N +L + +SG K +++ D M Q PD ++Y I+++ CR
Sbjct: 207 --------YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ +L+ + ++ + T + LV G LD A + M
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS--------------- 303
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
G + + + ++ SM + +L K ++P+ + L+ + G +
Sbjct: 304 -GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ +LE M + P+ +SY ++ K MDRA + L M G + +TYN
Sbjct: 363 AIDILEKMPQH---GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
+L CK +++ A E+L +++ P +++YN +IDG + A+ +EMRA+
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
+ P I+Y++L+ + G+ A + F E ++ + + +N ++ G C+
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
G P+ +Y G+A EAL L NE+
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 153/360 (42%), Gaps = 68/360 (18%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + M SG P+V + ++ + S+G ++A L + LRK P V
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM---LRKGFSPSVVT--- 346
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
FN ++N G + + ++MPQ G P++LSYN ++ C++ + D +
Sbjct: 347 -----FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDL-DTAEIIVQAMREKRRDLCRILRESNSEYIG 330
LER++ + + T ++++ A G + D EI+ Q
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ---------------------- 439
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
L K +P Y T++ G K+G+ +
Sbjct: 440 ------------------------------LSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
++L+ MR +D PD ++Y+++V L + G +D A + E R+G+ N +T+N ++
Sbjct: 470 KLLDEMRAKD---LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G CK Q D+A + L M +P+ SY ILI+G + AL NE+ +G+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRG-CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 144/348 (41%), Gaps = 53/348 (15%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
+P+ Y T+++ SG++ + +L+ M ++D +PD ++YT ++ A + +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---CYPDVITYTILIEATCRDSGVGH 257
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE--------------- 471
A ++L EM G + + +TYN+L+ G CK+ ++D+A + L +M
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 472 ---------DAE----------IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
DAE P VV++NILI+ A+ +M G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+SY L+ F + A + MV+ D++ +N ++ C+ G
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLK 632
G P + TY + +G+A A K G+A+ L +E++ + LK
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK---------------DLK 481
Query: 633 PDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEM 680
PD +L R +A++ E GI PN F I + +
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
TTL++G+ + G+ ++LE + + S + PD ++Y ++S KAG ++ A VL
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEIL---EGSGAVPDVITYNVMISGYCKAGEINNALSVL-- 195
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
R+ VS + +TYN +L+ C ++ +A E+L M + + PDV++Y ILI+
Sbjct: 196 -DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVITYTILIEATCRDS 253
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
A+ +EMR RG P ++Y L+ G+ A + ++M + + ++I
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITH 312
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
N+++ C G GF P V T+ N
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 23/297 (7%)
Query: 377 MKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
++ +++G + + + LE M + PD + TT++ + G +A ++L +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNV---PDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 437 IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
G + ITYN+++ GYCK +I+ A +L M+ + PDVV+YN ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLK 221
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
A+ + M R P I+YT L++A A ++ DEM D D++ +N+L
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVL 280
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWE 616
V G C+ G +G P+V T+ + + W + E+
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR-------WMDA-EKLL 332
Query: 617 AGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
A R+ SV + L + R +A++I+ M ++G PN +
Sbjct: 333 ADMLRKGFSPSVVT-------FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 208/474 (43%), Gaps = 45/474 (9%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G P V ++ ++ G EA+ LF K+ + VA P+ FN V++
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFS-------KMEEAGVA----PNVVTFNTVID 303
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
G ++M + G+ P ++Y+I++K R R FVL+ + ++ P
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL------------CRILRESNSE--- 327
+ ++L+ ++++ G L+ A I M K L C+ + N+E
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 328 ----YIG-----GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK 378
IG G SV L + M S + +L + +P + TTL+
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR-----FVGEMLLRNMSPGGGLLTTLIS 478
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
G K G+ S + LE + + D + ++ L +AG +D A ++ E+ G
Sbjct: 479 GLCKHGKHS---KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
+R++YN L+ G C + ++D+A L EM + ++PD +Y+ILI G ++ A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEA 594
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+ F+++ + G+ P +Y+ ++ + + + FDEM++ V+ + + +N L+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIR 653
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
YCR G G P+ TY S G+++ + EA +L+ E++
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 35/407 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V ML P + ++S L G +AL L+ + + D+R
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF-------QFLNKGFVVDTR 506
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
NA+L+ +G ++ E+ G V D +SYN ++ CC K + D
Sbjct: 507 TS----NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ ++++ + T L+ + ++ A +Q + +R+ G
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEA---IQFWDDCKRN-------------GM 606
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D ++ + ++ + ++ K PNT +Y L++ Y +SGR+S +
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E M+ + S P+ +YT+++ + ++ A+ + EM G+ N Y L+
Sbjct: 667 LREDMKHKGIS---PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY K Q+ K LLREM + P+ ++Y ++I G + A NEMR +GI
Sbjct: 724 GYGKLGQMVKVECLLREM-HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
P I+Y + + G A + DE + WN L++
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDE----ENYAAIIEGWNKLIQ 825
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 182/464 (39%), Gaps = 39/464 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V+K M + G+ P+V ++ ++ +EA L +A+ +I D V+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSF------IEAGSLNKAI-----EIKDLMVSKGLS 397
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD-LLVF 270
+ +N ++ +G +L EM G + S+ V+ L C D L F
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 271 VLERILEQNVP-----------LCMTTLHS----LVAAYVDFG---DLDTAEIIVQAMRE 312
V E +L P LC HS L +++ G D T+ ++ + E
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 313 --KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
K + RI +E G D V L + ++ ++ + P+
Sbjct: 518 AGKLDEAFRIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
Y+ L+ G +V + ++ + +R + PD +Y+ ++ KA + ++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKR---NGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM V N + YN L++ YC+ ++ A EL RE + I P+ +Y LI G
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPNSATYTSLIKGMS 691
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
++ A F EMR G+ P YT L+ + GQ + EM + V +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNVHPNK 750
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
I + +++ GY R G G PD TY F G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K +P+ ++TT + + K G+V + V++ M +++ P+ V++ TV+ L G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM---EEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
D A +M G+ ITY+IL+KG + +I A +L+EM + P+V+ YN
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYN 369
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM--- 540
LID I A+ + M ++G++ T +Y TL+K + +GQ A R+ EM
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 541 ---VNDP-------------------RVKVDLIAWNM---------LVEGYCRLGXXXXX 569
VN R +++ NM L+ G C+ G
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
GF D T + +G+ A K EA + E+ R
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+++ ++ + P Y+ L+KG ++ R+ D +L+ M ++ P+ + Y ++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFPPNVIVYNNLI 372
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA-- 473
+ ++AG +++A ++ M G+S TYN L+KGYCK Q D A LL+EM
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
Q S L+ ++ D AL F EM R ++P TTL+ G+ A
Sbjct: 433 VNQGSFTSVICLLCSHLMFDS---ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
++ + +N V VD N L+ G C G G D +Y + +
Sbjct: 490 LELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 594 GIALARKPGEALILWNEVKER 614
G +K EA + +E+ +R
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKR 569
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 175/417 (41%), Gaps = 40/417 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++K ML G+ + ++++V+ L S +F + R + ++ +++
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHL-------MFDSALRFVGEMLLRNMS---- 467
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P G +++ G L+L+ + G V D + N ++ C + D +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ IL + + + ++L++ LD A + + M + R L+ N Y
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK------RGLKPDNYTY--- 578
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVY----QPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
L+ N + + + +LP YT Y+ ++ G K+ R
Sbjct: 579 ------SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT-----YSVMIDGCCKAERTE 627
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + M ++ P+ V Y ++ A ++G + A ++ +M G+S N TY
Sbjct: 628 EGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
L+KG ++++A+ L EM + ++P+V Y LIDG + EM +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+ + P KI+YT ++ +A G A R+ +EM + + D I + + GY + G
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPDSITYKEFIYGYLKQG 799
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P + ++++LV+A + + + + GVS + + + +CK ++++A +L
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+M E+A + P+VV++N +IDG + A F +M RG+ PT I+Y+ L+K
Sbjct: 283 FSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+ + A+ V EM ++I +N L++ + G G
Sbjct: 342 RAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 586 GTYGSFANGIALARKPGEA 604
TY + G K G+A
Sbjct: 401 STYNTLIKGYC---KNGQA 416
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 208/474 (43%), Gaps = 45/474 (9%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G P V ++ ++ G EA+ LF K+ + VA P+ FN V++
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFS-------KMEEAGVA----PNVVTFNTVID 303
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
G ++M + G+ P ++Y+I++K R R FVL+ + ++ P
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL------------CRILRESNSE--- 327
+ ++L+ ++++ G L+ A I M K L C+ + N+E
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 328 ----YIG-----GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK 378
IG G SV L + M S + +L + +P + TTL+
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR-----FVGEMLLRNMSPGGGLLTTLIS 478
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
G K G+ S + LE + + D + ++ L +AG +D A ++ E+ G
Sbjct: 479 GLCKHGKHS---KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
+R++YN L+ G C + ++D+A L EM + ++PD +Y+ILI G ++ A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEA 594
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+ F+++ + G+ P +Y+ ++ + + + FDEM++ V+ + + +N L+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIR 653
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
YCR G G P+ TY S G+++ + EA +L+ E++
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 35/407 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V ML P + ++S L G +AL L+ + + D+R
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF-------QFLNKGFVVDTR 506
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
NA+L+ +G ++ E+ G V D +SYN ++ CC K + D
Sbjct: 507 TS----NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ ++++ + T L+ + ++ A +Q + +R+ G
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEA---IQFWDDCKRN-------------GM 606
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D ++ + ++ + ++ K PNT +Y L++ Y +SGR+S +
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E M+ + S P+ +YT+++ + ++ A+ + EM G+ N Y L+
Sbjct: 667 LREDMKHKGIS---PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY K Q+ K LLREM + P+ ++Y ++I G + A NEMR +GI
Sbjct: 724 GYGKLGQMVKVECLLREM-HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
P I+Y + + G A + DE + WN L++
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDE----ENYAAIIEGWNKLIQ 825
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 182/464 (39%), Gaps = 39/464 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V+K M + G+ P+V ++ ++ +EA L +A+ +I D V+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSF------IEAGSLNKAI-----EIKDLMVSKGLS 397
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD-LLVF 270
+ +N ++ +G +L EM G + S+ V+ L C D L F
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 271 VLERILEQNVP-----------LCMTTLHS----LVAAYVDFG---DLDTAEIIVQAMRE 312
V E +L P LC HS L +++ G D T+ ++ + E
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 313 --KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
K + RI +E G D V L + ++ ++ + P+
Sbjct: 518 AGKLDEAFRIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
Y+ L+ G +V + ++ + +R + PD +Y+ ++ KA + ++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKR---NGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM V N + YN L++ YC+ ++ A EL RE + I P+ +Y LI G
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPNSATYTSLIKGMS 691
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
++ A F EMR G+ P YT L+ + GQ + EM + V +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNVHPNK 750
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
I + +++ GY R G G PD TY F G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K +P+ ++TT + + K G+V + V++ M +++ P+ V++ TV+ L G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM---EEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
D A +M G+ ITY+IL+KG + +I A +L+EM + P+V+ YN
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYN 369
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM--- 540
LID I A+ + M ++G++ T +Y TL+K + +GQ A R+ EM
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 541 ---VNDP-------------------RVKVDLIAWNM---------LVEGYCRLGXXXXX 569
VN R +++ NM L+ G C+ G
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
GF D T + +G+ A K EA + E+ R
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+++ ++ + P Y+ L+KG ++ R+ D +L+ M ++ P+ + Y ++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK---GFPPNVIVYNNLI 372
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA-- 473
+ ++AG +++A ++ M G+S TYN L+KGYCK Q D A LL+EM
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
Q S L+ ++ D AL F EM R ++P TTL+ G+ A
Sbjct: 433 VNQGSFTSVICLLCSHLMFDS---ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
++ + +N V VD N L+ G C G G D +Y + +
Sbjct: 490 LELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 594 GIALARKPGEALILWNEVKER 614
G +K EA + +E+ +R
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKR 569
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 175/417 (41%), Gaps = 40/417 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++K ML G+ + ++++V+ L S +F + R + ++ +++
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHL-------MFDSALRFVGEMLLRNMS---- 467
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P G +++ G L+L+ + G V D + N ++ C + D +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ IL + + + ++L++ LD A + + M + R L+ N Y
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK------RGLKPDNYTY--- 578
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVY----QPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
L+ N + + + +LP YT Y+ ++ G K+ R
Sbjct: 579 ------SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT-----YSVMIDGCCKAERTE 627
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + M ++ P+ V Y ++ A ++G + A ++ +M G+S N TY
Sbjct: 628 EGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
L+KG ++++A+ L EM + ++P+V Y LIDG + EM +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+ + P KI+YT ++ +A G A R+ +EM + + D I + + GY + G
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPDSITYKEFIYGYLKQG 799
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P + ++++LV+A + + + + GVS + + + +CK ++++A +L
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+M E+A + P+VV++N +IDG + A F +M RG+ PT I+Y+ L+K
Sbjct: 283 FSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+ + A+ V EM ++I +N L++ + G G
Sbjct: 342 RAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 586 GTYGSFANGIALARKPGEA 604
TY + G K G+A
Sbjct: 401 STYNTLIKGYC---KNGQA 416
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 235/563 (41%), Gaps = 53/563 (9%)
Query: 148 HTLYA-ASVVKSMLRSGYLPHV-KAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPD 205
H++Y+ AS++ ++ +GY+ V K ++ S GD++ L L R + + D
Sbjct: 121 HSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNK------DER 174
Query: 206 VAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRK 265
+ G +N +LN+ A G Q++ EM + V P+ +YN ++ C+
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 266 DLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK--RRD------- 316
+ + +I+E + T SL+ Y DLD+A + M K RR+
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 317 ---LC--RILRESNSEYIGGKNDSVF-----QKLLPNSMNQSXXXXXXXVYQPPLLPKPY 366
LC R + E+ ++ K+D F +L S+ S +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
PN YT L+ + +L M + P+ ++Y +++ K G ++
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK---GLMPNVITYNALINGYCKRGMIED 411
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A V+ M +S N TYN L+KGYCK + KA +L +M E ++ PDVV+YN LI
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLE-RKVLPDVVTYNSLI 469
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
DG + A + M RG+ P + +YT+++ + S + + A +FD + V
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGV 528
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
+++ + L++GYC+ G P+ T+ + +G+ K EA +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 607 LWNEVKE---------------RWEAGRDRENSDSSVPPL-----KPDEGLLDTLADICV 646
L ++ + R D +++ S + KPD T
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 647 RAAFFRKALEIVACMEENGIPPN 669
R A +++A M ENG+ P+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPD 671
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 175/406 (43%), Gaps = 27/406 (6%)
Query: 193 AVTRRLRKITDPDVAA---DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDA 249
V RR+ + D V + P + ++ + S L L EM + G+ P+
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 250 LSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQA 309
+Y +++ C + + + +L ++LE+ + + T ++L+ Y G ++ A +V+
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 310 MREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPN 369
M + R L R N E I G S K + +N+ +L + P+
Sbjct: 419 M--ESRKLSPNTRTYN-ELIKGYCKSNVHKAM-GVLNK-------------MLERKVLPD 461
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
Y +L+ G +SG R+L M +D PD +YT+++ +L K+ ++ A
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLM---NDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
+ + + GV+ N + Y L+ GYCK ++D+A +L +M P+ +++N LI G
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHG- 576
Query: 490 ILVDDSAGALSFFNE-MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ D + E M G+ PT + T L+ G A+ F +M++ K
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG-TKP 635
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
D + ++ YCR G NG PD+ TY S G
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 32/339 (9%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L PN Y ++ GY K G V + + + + ++ PD +YT+++ +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV---EAGLDPDFFTYTSLIMGYCQ 265
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+D A +V EM G N + Y L+ G C +ID+A +L +M +D E P V
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVR 324
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y +LI + + AL+ EM GI P +YT L+ + + + A + +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA---- 596
+ + + ++I +N L+ GYC+ G P+ TY G
Sbjct: 385 L-EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 597 ----------LARKPGEALILWNEVKERWEAGRDRE-NSDSSVPPLK--------PDEGL 637
L RK ++ +N + + G+ R N DS+ L PD+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLID----GQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 638 LDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
++ D ++ +A ++ +E+ G+ PN +T +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 28/296 (9%)
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
Y T++++L + G +D +QV EM V N TYN ++ GYCK +++A + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
E A + PD +Y LI G D A FNEM +G +++YT L+ ++ +
Sbjct: 246 E-AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 531 KLAHRVFDEMVND---PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
A +F +M +D P V+ + +L++ C G P++ T
Sbjct: 305 DEAMDLFVKMKDDECFPTVR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 588 YGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVR 647
Y + + K +A L ++ E+ L P+ + L + +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKG---------------LMPNVITYNALINGYCK 405
Query: 648 AAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSK-HASRARQDRRVERK 702
A+++V ME + PN TR Y E+ S H + ++ +ERK
Sbjct: 406 RGMIEDAVDVVELMESRKLSPN----TRTYNELIKGYCKSNVHKAMGVLNKMLERK 457
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/484 (18%), Positives = 187/484 (38%), Gaps = 60/484 (12%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V+ ML LP V +++++ SG+ F + R L + D +
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN-------FDSAYRLLSLMNDRGLV---- 494
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD + +++++ S + LFD + Q GV P+ + Y ++ C+ + D +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD---------LCRILR 322
LE++L +N T ++L+ G L A ++ + M + + R+L+
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMN----------QSXXXXXXXVYQPPLLPK----PYTP 368
+ + ++ + FQ++L + Q+ + ++ K +P
Sbjct: 615 DGDFDHAYSR----FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF----- 423
+ Y++L+KGY G + T + ++R D+ P ++ +++ L++ +
Sbjct: 671 DLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 424 -------------MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
D ++L +M V+ N +Y L+ G C+ + A ++ M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
+ I P + +N L+ C + A ++M G P S L+ G+
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 531 KLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
+ VF ++ + D +AW ++++G + G NG TY
Sbjct: 848 ERGTSVFQNLLQCGYYE-DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 591 FANG 594
G
Sbjct: 907 LIEG 910
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/453 (19%), Positives = 174/453 (38%), Gaps = 61/453 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSG------DSVEAL----------------- 188
A ++ ML G +P+V ++A+++ G D VE +
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 189 GLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPD 248
G ++ + + + + PD +N++++ SG+ +L M G+VPD
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 249 ALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQ 308
+Y ++ C+ R + + + + ++ V + +L+ Y G +D A ++++
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 309 AMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTP 368
M K C N F L+ + + + + ++ P
Sbjct: 557 KMLSKN---CL------------PNSLTFNALI-HGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
T L+ +K G + M S + PD +YTT + + G + A
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQML---SSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI-- 486
++A+M GVS + TY+ L+KGY Q + A ++L+ M D +P ++ LI
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTFLSLIKH 716
Query: 487 --------------DGCILVD--DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
+ C + + + + +M + P SY L+ G
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 531 KLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRL 563
++A +VFD M + + + +N L+ C+L
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 191/477 (40%), Gaps = 75/477 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M+ GY P ++ +V L + EA+ A+ R+ V +
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV----ALVERM-------VVKGCQ 202
Query: 212 PDTGAFNAVLNACANSGD-------------GKM----------------------FLQL 236
PD + AV+N G+ GK+ L L
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 237 FDEMPQFGVVPDALSYNIVMKLCCR----KDRKDLLVFVLERILEQNVPLCMTTLHSLVA 292
F EM G+ PD +Y+ ++ C D LL +LER + NV T +SL+
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV----VTFNSLID 318
Query: 293 AYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXX 352
A+ G L AE + M ++ D N + L+
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSID---------------PNIVTYNSLINGFCMHDRLDE 363
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT 412
++ ++ K P+ Y TL+ G+ K+ +V D + + M R+ + V+YT
Sbjct: 364 AQQIF-TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR---GLVGNTVTYT 419
Query: 413 TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAED 472
T++ +A D A+ V +M GV N +TYN LL G CK +++KA ++ E +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQK 478
Query: 473 AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKL 532
++++PD+ +YNI+ +G F + +G+ P I+Y T++ F G +
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 533 AHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYG 589
A+ +F +M D + D +N L+ + R G F D TYG
Sbjct: 539 AYTLFIKMKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/556 (20%), Positives = 230/556 (41%), Gaps = 61/556 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLA---------SSGDSVEALG----------LFR 192
A + M++S P + +S ++S +A S G+ +E LG +
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 193 AVTRRLR-----KITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
+ RR + I + P N++LN + + L D+M + G P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
D +++ ++ + ++ V ++ER++ + + T +++ G+ D A ++
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
M + + + D V + +S+ + + K
Sbjct: 229 NKMEKGKIE----------------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y++L+ GR SD R+L M + +P+ V++ +++ A K G + A
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLER---KINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM + + N +TYN L+ G+C ++D+A+++ M + PDVV+YN LI+
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLIN 388
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G + F +M RG+ ++YTTL+ F + A VF +MV+D V
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-VH 447
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
+++ +N L++G C+ G + PD+ TY + G+ A K
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK------- 500
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
V++ W+ S+ +KPD +T+ + +A + M+E+G
Sbjct: 501 ---VEDGWDL-----FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 668 PNKTKFTRIYVEMHSR 683
P+ + + + H R
Sbjct: 553 PDSGTYNTL-IRAHLR 567
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 164/370 (44%), Gaps = 31/370 (8%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A ++ M G P V +S+++S L + G +A R ++ L + +P+V
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA---SRLLSDMLERKINPNVV 311
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
FN++++A A G +LFDEM Q + P+ ++YN ++ C DR D
Sbjct: 312 T--------FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ ++ ++ + T ++L+ + A+ +V M E RD+ R
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFC------KAKKVVDGM-ELFRDMSR------RG 410
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+G N + L+ S V++ ++ PN Y TL+ G K+G++
Sbjct: 411 LVG--NTVTYTTLIHGFFQASDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + E +++ S PD +Y + + KAG ++ + ++ GV + I YN
Sbjct: 468 KAMVVFEYLQK---SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
++ G+CK+ ++A L +M ED + PD +YN LI + D A + EMR+
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 508 RGIAPTKISY 517
A +Y
Sbjct: 584 CRFAGDASTY 593
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 202/496 (40%), Gaps = 56/496 (11%)
Query: 109 LPSLTRAQSILTRLRNERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHV 168
LPS+ +L LR+ R +++ A++V ++M+ G +P V
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNK---------------------ASAVYETMIEHGIMPTV 238
Query: 169 KAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSG 228
++ ++ +GD ++ + RR + ++ +N ++N + +G
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV-----------TYNILINGFSKNG 287
Query: 229 DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLH 288
+ + +M + G S+N +++ C++ D V + +L + +T +
Sbjct: 288 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 347
Query: 289 SLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQS 348
+ A DFG +D A ++ +M D V L + +
Sbjct: 348 IYICALCDFGRIDDARELLSSM--------------------AAPDVVSYNTLMHGYIKM 387
Query: 349 XXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDH 408
+ L P+ Y TL+ G +SG + R+ E M Q PD
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ---LIFPDV 444
Query: 409 VSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLRE 468
++YTT+V VK G + A +V EM R G+ + Y G + DKA L E
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 469 MAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
M PD+ YN+ IDG V + A+ F ++ G+ P ++YTT+++ + +G
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 529 QPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
Q K+A ++DEM+ R+ +I + +L+ G+ + G G P+V T+
Sbjct: 565 QFKMARNLYDEMLR-KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 589 GSFANGIALARKPGEA 604
+ G+ A EA
Sbjct: 624 NALLYGMCKAGNIDEA 639
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 204/499 (40%), Gaps = 79/499 (15%)
Query: 233 FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVA 292
FL F++M + G +P + NIV+K+ + V E ++E + + T ++++
Sbjct: 187 FLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLD 246
Query: 293 AYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXX 352
+ GDL+ + I M KRR++ + V +L N +++
Sbjct: 247 SCFKAGDLERVDKIWLEM--KRRNI--------------EFSEVTYNILINGFSKNGKME 290
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT 412
+ + + + L++GY K G D + + M ++ +P +Y
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML---NAGIYPTTSTYN 347
Query: 413 TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAED 472
+ AL G +D AR++L+ M + + ++YN L+ GY K + +A L ++
Sbjct: 348 IYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDL-RA 402
Query: 473 AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKL 532
+I P +V+YN LIDG + GA EM + I P I+YTTL+K F +G +
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 533 AHRVFDEMV-----------------------NDPRVKV------------DLIAWNMLV 557
A V+DEM+ +D ++ DL +N+ +
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY-----GSFANG-IALARKPGEALI---LW 608
+G C++G G PD TY G NG +AR + ++ L+
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 609 NEVKERW-------EAGRDRENSDSSVP----PLKPDEGLLDTLADICVRAAFFRKALEI 657
V + +AGR + S ++P+ + L +A +A
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 658 VACMEENGIPPNKTKFTRI 676
+ MEE GIPPNK +T +
Sbjct: 643 LCKMEEEGIPPNKYSYTML 661
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 162/403 (40%), Gaps = 35/403 (8%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M RSG+ +++ ++ G +A G +TD + A P T +N
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG-----------VTDEMLNAGIYPTTSTYN 347
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
+ A + G +L M PD +SYN +M + + + + +
Sbjct: 348 IYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
++ + T ++L+ + G+L+ A+ R+ E ++ I + +
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQ--------------RLKEEMTTQLIF-PDVITYT 448
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L+ + VY +L K P+ YTT G ++ G R+ E M
Sbjct: 449 TLVKGFVKNGNLSMATEVYDE-MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
D A PD Y + L K G + +A + ++ R+G+ + +TY +++GY + Q
Sbjct: 508 TDHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
AR L EM + P V++Y +LI G A + EM+ RG+ P +++
Sbjct: 566 FKMARNLYDEMLR-KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
L+ +G A+R +M + + + ++ ML+ C
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKM-EEEGIPPNKYSYTMLISKNC 666
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 156/391 (39%), Gaps = 39/391 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V ML +G P ++ + L G +A L ++ +
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM---------------AA 371
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD ++N +++ G LFD++ + P ++YN ++ C + +
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK--RRDLCRILRESNSEYI 329
E + Q + + T +LV +V G+L A + M K + D + E
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 330 GGKNDSVFQ------------------KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTR 371
G +D F+ + + + + +Q + P+
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
YTT+++GY+++G+ + + M R+ +P ++Y ++ KAG +++A Q
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRK---RLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
EM + GV N +T+N LL G CK ID+A L +M E+ I P+ SY +LI
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IPPNKYSYTMLISKNCD 667
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
+ + + EM + I P ++ L K
Sbjct: 668 FEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 200/475 (42%), Gaps = 58/475 (12%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ M++ GY P + S++++ +A+ L D V R
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL-----------VDQMVEMGYR 187
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PDT F +++ + L D M Q G P+ ++Y +V+ C++ DL +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 272 LERI----LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
L ++ +E NV + T + SL C+ E ++
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSL---------------------------CKYRHEDDAL 280
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQ---------PPLLPKPYTPNTRIYTTLMK 378
+ + ++ + + PN + S Y+ ++ + PN + L+
Sbjct: 281 NLFTEMEN--KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
++K G++ + ++ + M ++ + PD +Y+++++ +D A+ + M
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
N +TYN L+ G+CK +ID+ EL REM++ + + V+Y LI G D A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNA 454
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
F +M + G+ P ++Y TL+ +G+ + A VF E + +++ + +N+++E
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIE 513
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G C+ G G PDV Y + +G EA L+ +++E
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 181/436 (41%), Gaps = 73/436 (16%)
Query: 186 EALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGV 245
+A+GLF + V + P FN +L+A A + + L ++M + G+
Sbjct: 68 DAIGLFGGM-----------VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 246 VPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEI 305
+ +YNI++ CR+ + L + +L ++++ + TL SL+ Y + A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 306 IVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKP 365
+V M E
Sbjct: 177 LVDQMVE---------------------------------------------------MG 185
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y P+T +TTL+ G + S+ V +++ M ++ P+ V+Y VV+ L K G +D
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTYGVVVNGLCKRGDID 242
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +L +M + AN + Y+ ++ CK D A L EM E+ ++P+V++Y+ L
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 301
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN--- 542
I + + A ++M R I P +++ L+ AF G+ A +++DEM+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
DP D+ ++ L+ G+C P+V TY + NG A++
Sbjct: 362 DP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 603 EALILWNEVKERWEAG 618
E + L+ E+ +R G
Sbjct: 418 EGVELFREMSQRGLVG 433
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 172/392 (43%), Gaps = 31/392 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M++ G P++ + VV+ L GD A L + AA
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-----------AAKIE 257
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
+ ++ V+++ L LF EM GV P+ ++Y+ ++ C +R +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++E+ + + T ++L+ A+V G L AE + M ++ D
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--------------- 362
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + L+ +++ ++ K PN Y TL+ G+ K+ R+ + V
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFEL-MISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M ++ + V+YTT++ +A D A+ V +M GV N +TYN LL
Sbjct: 422 LFREMSQRGLVG---NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CK +++KA ++ E + ++++P + +YNI+I+G F + +G+
Sbjct: 479 GLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
P I Y T++ F G + A +F +M D
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 31/327 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M G P+V +S+++S L + +A L + R KI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER--KIN--------- 327
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ FNA+++A G +L+DEM + + PD +Y+ ++ C DR D +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E ++ ++ + T ++L+ + +D + + M ++ G
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR----------------GL 431
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
++V L + Q+ + ++ PN Y TL+ G K+G++ +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E ++R S P +Y ++ + KAG ++ + ++ GV + I YN ++
Sbjct: 492 VFEYLQR---SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPD 478
G+C++ ++A L R+M ED + PD
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPL-PD 574
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
+ ++ + Y +++ + S ++ D + + M + S P + ++SA+ K
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVK---SRPLPSIFEFNKLLSAIAKMKK 100
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
D + +M R+G+S N TYNIL+ +C++ QI A LL +M + +P +V+ +
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK-LGYEPSIVTLS 159
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
L++G + A++ ++M G P I++TTL+ L + A + D MV
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
+ +L+ + ++V G C+ G +V Y + + + R +
Sbjct: 220 G-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 604 ALILWNEVK---------------------ERWEAGRDRENSDSSVPPLKPDEGLLDTLA 642
AL L+ E++ ERW + R SD + P+ + L
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERW-SDASRLLSDMIERKINPNVVTFNALI 337
Query: 643 DICVRAAFFRKALEIVACMEENGIPPNKTKFTRIY--VEMHSRMFTSKH 689
D V+ +A ++ M + I P+ ++ + MH R+ +KH
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 184/465 (39%), Gaps = 36/465 (7%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
D P ++NA+++ +SG +++ M G+ PD S+ I MK C+ R
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ +L + Q + + ++V + + + M LC
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCL--------- 216
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
S F KLL + + ++ + PN Y ++G + G +
Sbjct: 217 ------STFNKLLRVLCKKGDVKECEKLLDK-VIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
VRM+ + Q PD ++Y ++ L K A L +M G+ + TYN
Sbjct: 270 AVRMVGCLIEQ---GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
L+ GYCK + A ++ + + + PD +Y LIDG ++ AL+ FNE +
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
GI P I Y TL+K + G A ++ +EM + ++ +N+LV G C++G
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP-EVQTFNILVNGLCKMGCVSD 444
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSV 628
G+ PD+ T+ +G + K AL + + + + G D
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM---LDNGVD-------- 493
Query: 629 PPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
PD ++L + + + F +E M E G PN F
Sbjct: 494 ----PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 190/454 (41%), Gaps = 33/454 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V ++ G P V ++ ++ L + F+ L K+ + +
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK-------FQEAEVYLGKMVNEGL----E 318
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD+ +N ++ G ++ ++ + G VPD +Y ++ C + + + +
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L + + + ++L+ + G + A + M EK ++ E +
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG-----LIPEVQT----- 428
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+L N + + ++ K Y P+ + L+ GY ++ + +
Sbjct: 429 ------FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L+ M D+ PD +Y ++++ L K + + M G + N T+NILL+
Sbjct: 483 ILDVML---DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM-RARGI 510
C+ ++D+A LL EM ++ + PD V++ LIDG D GA + F +M A +
Sbjct: 540 SLCRYRKLDEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
+ + +Y ++ AF +A ++F EMV D + D + ++V+G+C+ G
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
NGF P + T G N + + + EA
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 186/466 (39%), Gaps = 73/466 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ +M G +V A+ VV E LF + +A+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-----------LASGVS 213
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
FN +L GD K +L D++ + GV+P+ +YN+ ++ C++ D V +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ ++EQ + T ++L+ LC+
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYG-----------------------LCK------------ 298
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+S FQ+ VY ++ + P++ Y TL+ GY K G V R
Sbjct: 299 --NSKFQE--------------AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 392 MLEAMRRQDDSASH---PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
++ D+ + PD +Y +++ L G +RA + E G+ N I YN
Sbjct: 343 IV------GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
L+KG Q I +A +L EM+E I P+V ++NIL++G + + A M ++
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
G P ++ L+ ++ + + A + D M+ D V D+ +N L+ G C+
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVML-DNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G P++ T+ + RK EAL L E+K +
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 20/302 (6%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+Y MK Y + G+V + V + E R D P SY ++S LV +G+ D+A +V
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFE---RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
M G++ + ++ I +K +CK + A LL M+ + +VV+Y ++ G
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYE 193
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+ A F +M A G++ ++ L++ G K ++ D+++ V +L
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG-VLPNLF 252
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
+N+ ++G C+ G G PDV TY + G+ K EA + ++
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 612 KERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKT 671
L+PD +TL + + A IV NG P++
Sbjct: 313 VNEG---------------LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 672 KF 673
+
Sbjct: 358 TY 359
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +VK M+ GY P + ++ ++ ++ AL +I D +
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL-----------EILDVMLDNGVD 493
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N++LN + + ++ + M + G P+ ++NI+++ CR + D + +
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
LE + ++V T +L+ + GDLD A + + M E + + S Y
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK-----VSSSTPTY--- 605
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
++ ++ + ++ + P+ Y ++ G+ K+G V+ +
Sbjct: 606 -------NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 392 -MLEAMR-----------RQDDSASHPDHV-SYTTVVSALVKAGFMDRARQVLAEMTRIG 438
+LE M R + D V ++ +V+ G + A + ++ +
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKE 718
Query: 439 VSANRITYNILLKGYC 454
V+A ++ LLK C
Sbjct: 719 VAAPKLVLEDLLKKSC 734
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 180/442 (40%), Gaps = 31/442 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M+ GY P ++ +V L + EA+ A+ R+ V +
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV----ALVERM-------VVKGCQ 212
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD + AV+N G+ + L L ++M + + D + YN ++ C+ D +
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++ + + + T + L++ ++G A ++ M EK N + +
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN---------INPDLV-- 321
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
F L+ + + +Y + K P+ Y TL+KG+ K RV +
Sbjct: 322 ----FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG-- 375
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+E R + V+YTT++ +A D A+ V +M GV + +TYNILL
Sbjct: 376 -MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G C ++ A + M + +++ D+V+Y +I+ F + +G+
Sbjct: 435 GLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++YTT+M F G + A +F EM D + + +N L+ R G
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP-NSGTYNTLIRARLRDGDEAASAE 552
Query: 572 XXXXXXXNGFHPDVGTYGSFAN 593
GF D T+G N
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTN 574
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 55/400 (13%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ +L+A A + + L ++M G+ + +Y+I + CR+ + L + +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + TL+SL+ + + A +V M E
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE------------------- 173
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
Y P+T +TTL+ G + + S+ V
Sbjct: 174 --------------------------------MGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
++E M + PD V+Y V++ L K G D A +L +M + + A+ + YN ++
Sbjct: 202 LVERMVVK---GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CK +D A +L +M E I+PDV +YN LI + A ++M + I
Sbjct: 259 GLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P + + L+ AF G+ A +++DEMV D++A+N L++G+C+
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
G + TY + +G AR A +++ ++
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 40/239 (16%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ D + + M + S P V ++ ++SA+ K D + +M +G+S N
Sbjct: 55 KLDDAIGLFGDMVK---SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 445 TYNI-----------------------------------LLKGYCKQLQIDKARELLREM 469
TY+I LL G+C +I +A L+ +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
E QPD V++ L+ G + ++ A++ M +G P ++Y ++ G+
Sbjct: 172 VE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 530 PKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
P LA + ++M +++ D++ +N +++G C+ G PDV TY
Sbjct: 231 PDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 163/410 (39%), Gaps = 79/410 (19%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRR--------LRKITDPD- 205
V K + G++P ++ + +++ GD V + L V R L I D
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 206 ---------------VAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDAL 250
+A D +PD +N ++N G ++ + DE + G++P+ L
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 251 SYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
SY +++ C+ D+ +L ++ E+ + T L+ V G +D
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD--------- 432
Query: 311 REKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
D+V K+ L+ + +P+
Sbjct: 433 -----------------------DAVNMKV-------------------KLIDRGVSPDA 450
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
IY LM G K+GR + M D PD Y T++ +++G D AR+V
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEML---DRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
+ GV + + +N ++KG+C+ +D+A + M E+ + PD +Y+ +IDG +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE-HLVPDKFTYSTIIDGYV 566
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
D A A+ F M P ++YT+L+ F G K+A F EM
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/543 (20%), Positives = 205/543 (37%), Gaps = 116/543 (21%)
Query: 169 KAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS- 227
+A S V+ A SG +A+ ++ V DS PD A N++L+ S
Sbjct: 135 EALSHVLHAYAESGSLSKAVEIYDYVVELY----------DSVPDVIACNSLLSLLVKSR 184
Query: 228 --GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
GD + +++DEM G D S I++K C + + ++ ++E + +
Sbjct: 185 RLGDAR---KVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIV 241
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM 345
++++ Y GD++ A ++ + ++
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELK---------------------------------- 267
Query: 346 NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ------ 399
K + P + T++ G+ K G + R+L ++ +
Sbjct: 268 -----------------LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSV 310
Query: 400 -------DDSASH-------------------PDHVSYTTVVSALVKAGFMDRARQVLAE 433
D H PD +Y +++ L K G + A L E
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
++ G+ N ++Y L++ YCK + D A +LL +MAE +PD+V+Y ILI G ++
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG-CKPDIVTYGILIHGLVVSG 429
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
A++ ++ RG++P Y LM +G+ A +F EM+ D + D +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML-DRNILPDAYVY 488
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
L++G+ R G G DV + + G + EAL N + E
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 614 RWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
L PD+ T+ D V+ A++I ME+N PN +
Sbjct: 549 E---------------HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 674 TRI 676
T +
Sbjct: 594 TSL 596
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/439 (18%), Positives = 169/439 (38%), Gaps = 62/439 (14%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRR---------------LRKITDPDVAAD- 209
P V ++ +++RL G A+G +++ K + D+A+
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 210 --------SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR 261
+PD + +++ SG + + ++ GV PDA YN++M C+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 262 KDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRIL 321
R + +L++N+ +L+ ++ GD D A + EK
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK-------- 514
Query: 322 RESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYM 381
G K D V + +S + + P+ Y+T++ GY+
Sbjct: 515 --------GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 382 KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
K ++ +++ M + + P+ V+YT++++ G A + EM +
Sbjct: 567 KQQDMATAIKIFRYMEK---NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL-- 499
N +TY L++ K+ + E+ + P+ V++N L+ G V ++G +
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG--FVKKTSGKVLA 681
Query: 500 --------------SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
FF+ M++ G + +Y + + + G K A D+MV
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG- 740
Query: 546 VKVDLIAWNMLVEGYCRLG 564
D +++ ++ G+C +G
Sbjct: 741 FSPDPVSFAAILHGFCVVG 759
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 10/236 (4%)
Query: 385 RVSDT---VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
R+ D V++ + + + + + ++ + L + + VL + V
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKL 132
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
+ +L Y + + KA E+ + E + PDV++ N L+ + A
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
++EM RG + S L+K G+ ++ ++ + + +++ +N ++ GYC
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP-NIVFYNTIIGGYC 251
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI---LWNEVKER 614
+LG GF P + T+G+ NG K G+ + L +EVKER
Sbjct: 252 KLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC---KEGDFVASDRLLSEVKER 304
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 203/515 (39%), Gaps = 72/515 (13%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
+ + + K M+ G P ++ ++ L S + R++ D
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIRALCDS-----------SCVDAARELFDEMPEKGC 178
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+P+ F ++ +G L+L + M FGV+P+ + YN ++ CR+ R D
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR---------------- 314
++E++ E+ + + T +S ++A G + A I M
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 315 RDLCRI--------LRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLP--- 363
+ C++ L ES E ND + N Q + +L
Sbjct: 299 KGFCKVGLLEDAKTLFESIRE-----NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 364 -KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG 422
K P+ Y LM G K G +SD ++ M+R + PD V+Y ++ G
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR---NGVCPDAVTYGCLLHGYCSVG 410
Query: 423 FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSY 482
+D A+ +L EM R N T NILL K +I +A ELLR+M E D V+
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG-YGLDTVTC 469
Query: 483 NILIDGCILVDDSAGALSFFNEMRARGIA-----------------------PTKISYTT 519
NI++DG + A+ MR G A P I+Y+T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 520 LMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXN 579
L+ +G+ A +F EM+ + +++ D +A+N+ + +C+ G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 580 GFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G H + TY S G+ + + E L +E+KE+
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 32/403 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ +S+ + L +++++ + L G +EA L+++TD +
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA-------ETVLKQMTDKGIG---- 358
Query: 212 PDTGAFNAVLNACANSG---DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
P ++N +++ G D K + L M + GV PDA++Y ++ C + D
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGL---MKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL----CRILRES 324
+L+ ++ N T + L+ + G + AE +++ M EK L C I+ +
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXX-----XXXXXVYQPPLLPKPYTPNTRIYTTLMKG 379
G+ D + + ++ S + L+ P+ Y+TL+ G
Sbjct: 476 LCG--SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
K+GR ++ + M + PD V+Y + K G + A +VL +M + G
Sbjct: 534 LCKAGRFAEAKNLFAEMMGE---KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
+ TYN L+ G + QI + L+ EM E I P++ +YN I + A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG-ISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
+ +EM + IAP S+ L++AF +A VF+ V+
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 26/294 (8%)
Query: 404 SHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAR 463
+ P Y ++ + +K ++ + +M G++ T+N+L++ C +D AR
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 464 ELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA 523
EL EM E +P+ ++ IL+ G + L N M + G+ P K+ Y T++ +
Sbjct: 168 ELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 524 FALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF-- 581
F G+ + ++ ++M + V D++ +N + C+ G + +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVP-DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 582 --HPDVGTYGSFANGIALARKPGEALILWNEVKER-----------WEAGRDREN---SD 625
P+ TY G +A L+ ++E W G R
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 626 SSVPPLKPDEGL------LDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
+V D+G+ + L D + A IV M+ NG+ P+ +
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 170/415 (40%), Gaps = 108/415 (26%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + ++ GY V A+SA++S SG EA+ +F ++ R
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY-----------GLR 300
Query: 212 PDTGAFNAVLNACANSG-DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKD 266
P+ +NAV++AC G + K + FDEM + GV PD +++N ++ +C R + ++
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 267 LLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNS 326
L + R +EQ+V + ++L+ A G +D A I+ M KR
Sbjct: 361 LFDEMTNRRIEQDV----FSYNTLLDAICKGGQMDLAFEILAQMPVKR------------ 404
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
PN Y+T++ G+ K+GR
Sbjct: 405 ---------------------------------------IMPNVVSYSTVIDGFAKAGRF 425
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY 446
+ + + MR + D VSY T++S K G + A +L EM +G+ + +TY
Sbjct: 426 DEALNLFGEMRYLGIAL---DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 447 NILLKGYCKQLQIDKARELLREMAED---------------------------------- 472
N LL GY KQ + D+ +++ EM +
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 473 AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALS 527
A ++ DVV Y+ LID A+S +EM GI+P ++Y +++ AF S
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 180/382 (47%), Gaps = 29/382 (7%)
Query: 185 VEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFG 244
+ LG + VT ++I + A AF+A+++A SG + + +F+ M ++G
Sbjct: 240 ISTLGRYGKVTI-AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 245 VVPDALSYNIVMKLCCRK--DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDT 302
+ P+ ++YN V+ C + + K + F + + V T +SL+A G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKF-FDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 303 AEIIVQAMREKR--RDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPP 360
A + M +R +D+ ++ GG+ D F+ L Q P
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA----------------QMP 401
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+ K PN Y+T++ G+ K+GR + + + MR + D VSY T++S K
Sbjct: 402 V--KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL---DRVSYNTLLSIYTK 456
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G + A +L EM +G+ + +TYN LL GY KQ + D+ +++ EM + + P+++
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLL 515
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y+ LIDG A+ F E ++ G+ + Y+ L+ A +G A + DEM
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 541 VNDPRVKVDLIAWNMLVEGYCR 562
+ + +++ +N +++ + R
Sbjct: 576 TKEG-ISPNVVTYNSIIDAFGR 596
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 21/310 (6%)
Query: 368 PNTRIYTTLMKGYMKSG-RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
PN Y ++ K G + + M+R + PD +++ ++++ + G +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR---NGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
AR + EMT + + +YN LL CK Q+D A E+L +M I P+VVSY+ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTVI 416
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
DG AL+ F EMR GIA ++SY TL+ + G+ + A + EM + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS-VGI 475
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
K D++ +N L+ GY + G P++ TY + +G + EA+
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
++ E K AG L+ D L L D + A+ ++ M + GI
Sbjct: 536 IFREFK---SAG------------LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 667 PPNKTKFTRI 676
PN + I
Sbjct: 581 SPNVVTYNSI 590
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 20/303 (6%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y ++K +++ + + + E + + S PD Y ++ KAG ++A
Sbjct: 207 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
R+V + M GV + +TYN L+ ++ K + + + ++IQPDVVSY +LI
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK----IYDQMQRSDIQPDVVSYALLIK 322
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
ALS F EM G+ PT +Y L+ AFA+SG + A VF M D R+
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIF 381
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
DL ++ ++ Y +GF P++ TYG+ G A A + + +
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
+ +++ + +K ++ +L T+ D R F AL ME G+P
Sbjct: 442 YEKMR---------------LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 486
Query: 668 PNK 670
P++
Sbjct: 487 PDQ 489
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 137/356 (38%), Gaps = 65/356 (18%)
Query: 188 LGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
LG F R L ++ S P+ ++ A++ + G +F M G P
Sbjct: 152 LGNFNGAERVLSVLS----KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEP 207
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERIL-EQNVPLC--MTTLHSLVAAYVDFGDLDTAE 304
A++Y I++K D+ V E +L E+ PL H ++ Y G+ + A
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 267
Query: 305 IIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPK 364
+ +M +G K +P S
Sbjct: 268 KVFSSM------------------VG--------KGVPQS-------------------- 281
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
T Y +LM VS ++ + M+R D PD VSY ++ A +A
Sbjct: 282 -----TVTYNSLMSFETSYKEVS---KIYDQMQRSD---IQPDVVSYALLIKAYGRARRE 330
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+ A V EM GV YNILL + +++A+ + + M D I PD+ SY
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTT 389
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++ + D GA FF ++ G P ++Y TL+K +A + + V+++M
Sbjct: 390 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+++D+M + + PD +SY +++K R R++ + V E +L+ V + L+ A+
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
G ++ A+ + ++MR RD RI + S + +L +N S
Sbjct: 360 AISGMVEQAKTVFKSMR---RD--RIFPDLWS----------YTTMLSAYVNASDMEGAE 404
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
++ + + PN Y TL+KGY K+ V + + E MR S + TT+
Sbjct: 405 KFFKR-IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL---SGIKANQTILTTI 460
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ A + A EM GV ++ N+LL Q ++++A+EL E A
Sbjct: 461 MDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETAT 520
Query: 475 I 475
I
Sbjct: 521 I 521
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 20/303 (6%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y ++K +++ + + + E + + S PD Y ++ KAG ++A
Sbjct: 214 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 273
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
R+V + M GV + +TYN L+ ++ K + + + ++IQPDVVSY +LI
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK----IYDQMQRSDIQPDVVSYALLIK 329
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
ALS F EM G+ PT +Y L+ AFA+SG + A VF M D R+
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIF 388
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
DL ++ ++ Y +GF P++ TYG+ G A A + + +
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
+ +++ + +K ++ +L T+ D R F AL ME G+P
Sbjct: 449 YEKMR---------------LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 493
Query: 668 PNK 670
P++
Sbjct: 494 PDQ 496
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 135/356 (37%), Gaps = 65/356 (18%)
Query: 188 LGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
LG F R L ++ S P+ ++ A++ + G +F M G P
Sbjct: 159 LGNFNGAERVLSVLSK----MGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEP 214
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERIL-EQNVPLC--MTTLHSLVAAYVDFGDLDTAE 304
A++Y I++K D+ V E +L E+ PL H ++ Y G+ + A
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 274
Query: 305 IIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPK 364
VF ++ + QS
Sbjct: 275 ------------------------------KVFSSMVGKGVPQS---------------- 288
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
T Y +LM VS ++ + M+R D PD VSY ++ A +A
Sbjct: 289 -----TVTYNSLMSFETSYKEVS---KIYDQMQRSD---IQPDVVSYALLIKAYGRARRE 337
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+ A V EM GV YNILL + +++A+ + + M D I PD+ SY
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTT 396
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++ + D GA FF ++ G P ++Y TL+K +A + + V+++M
Sbjct: 397 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+++D+M + + PD +SY +++K R R++ + V E +L+ V + L+ A+
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
G ++ A+ + ++MR RD RI + S + +L +N S
Sbjct: 367 AISGMVEQAKTVFKSMR---RD--RIFPDLWS----------YTTMLSAYVNASDMEGAE 411
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
++ + + PN Y TL+KGY K+ +D +M+E + S + TT+
Sbjct: 412 KFFKR-IKVDGFEPNIVTYGTLIKGYAKA---NDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ A + A EM GV ++ N+LL Q ++++A+EL E A
Sbjct: 468 MDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETAT 527
Query: 475 I 475
I
Sbjct: 528 I 528
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 196/478 (41%), Gaps = 40/478 (8%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
++++M+R GY P V + ++ + + +A+ V L K PDV A
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAV----RVMEILEKFGQPDVFA------ 160
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+NA++N ++ D M PD ++YNI++ C + + DL + VL +
Sbjct: 161 --YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR--- 319
+L N + T L+ A + G +D A ++ M + R +C+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 320 ------ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
++R N E G + D + +L ++ + + PN Y
Sbjct: 279 VDRAFEMVR--NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
+ L+ + G++ + + +L+ M+ + PD SY +++A + G +D A + L
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEK---GLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
M G + + YN +L CK + D+A E+ ++ E P+ SYN +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE-VGCSPNSSSYNTMFSALWSSG 452
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
D AL EM + GI P +I+Y +++ G A + +M ++ +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTY 511
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
N+++ G+C+ NG P+ TY GI A EA+ L N++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 209/524 (39%), Gaps = 94/524 (17%)
Query: 174 VVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMF 233
+ R SG+ +E+L L + +RK +PDV ++ G F N
Sbjct: 95 IFHRSCRSGNYIESLHLLETM---VRKGYNPDVILCTKLIKGFFTL-----RNIPKAVRV 146
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
+++ ++ Q PD +YN ++ C+ +R D VL+R+ ++ T + ++ +
Sbjct: 147 MEILEKFGQ----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXX 353
G LD A ++ + + D C+
Sbjct: 203 LCSRGKLDLA---LKVLNQLLSDNCQ---------------------------------- 225
Query: 354 XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTT 413
P YT L++ M G V + +++++ M + PD +Y T
Sbjct: 226 --------------PTVITYTILIEATMLEGGVDEALKLMDEMLSR---GLKPDMFTYNT 268
Query: 414 VVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA 473
++ + K G +DRA +++ + G + I+YNILL+ Q + ++ +L+ +M +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE- 327
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
+ P+VV+Y+ILI A++ M+ +G+ P SY L+ AF G+ +A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
+ M++D + D++ +N ++ C+ G G P+ +Y + +
Sbjct: 388 IEFLETMISDGCLP-DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 594 GIALARKPGEALILWNEVKERWEAGRD-RENSDSSVPPLKPDEGLLDTLADICV------ 646
+ G+ + + + E G D E + +S+ EG++D ++ V
Sbjct: 447 ALW---SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 647 ----------------RAAFFRKALEIVACMEENGIPPNKTKFT 674
+A A+ ++ M NG PN+T +T
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 164/401 (40%), Gaps = 36/401 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V+ +L P V ++ ++ G EAL K+ D ++ +
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL-----------KLMDEMLSRGLK 260
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N ++ G ++ + G PD +SYNI+++ + + + +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ ++ + + T L+ G ++ A +++ M+EK G
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK----------------GL 364
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D+ L + + + ++ P+ Y T++ K+G+ +
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD---Q 421
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
LE + + P+ SY T+ SAL +G RA ++ EM G+ + ITYN ++
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
C++ +D+A ELL +M E P VV+YNI++ G A++ M G
Sbjct: 482 CLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
P + +YT L++ +G A E+ ND V++D I+
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAM----ELAND-LVRIDAIS 576
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 158/375 (42%), Gaps = 32/375 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ ML G P + ++ ++ + G A + R + +
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-----------GCE 295
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD ++N +L A N G + +L +M P+ ++Y+I++ CR + + + +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ + E+ + + L+AA+ G LD A ++ M G
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD----------------GC 399
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D V + ++ ++ L +PN+ Y T+ SG D +R
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG---DKIR 456
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
L + + PD ++Y +++S L + G +D A ++L +M + +TYNI+L
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+CK +I+ A +L M + +P+ +Y +LI+G A A+ N++ R A
Sbjct: 517 GFCKAHRIEDAINVLESMVGNG-CRPNETTYTVLIEGIGFAGYRAEAMELANDL-VRIDA 574
Query: 512 PTKISYTTLMKAFAL 526
++ S+ L + F L
Sbjct: 575 ISEYSFKRLHRTFPL 589
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 199/509 (39%), Gaps = 74/509 (14%)
Query: 199 RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEM-PQFGVVPDALSYNIVMK 257
R++ D V + FN ++N G + L + + M +F V PD ++YN ++K
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 258 LCCRKDR-KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR- 315
+K R DL +L+ VP T ++LV Y G L A IV+ M++
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVP-NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 316 -DLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYT 374
DLC +L N + + + P+ Y
Sbjct: 308 PDLCTY------------------NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASH----------------------------- 405
TL+ G + G + +++E M A+
Sbjct: 350 TLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM 409
Query: 406 ----PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
PD V+Y T++ A +K G + A +++ EM + G+ N IT N +L CK+ ++D+
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A LL + I D V+Y LI G + AL ++EM+ I PT ++ +L+
Sbjct: 470 AHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 522 KAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
G+ +LA FDE+ + D +N ++ GYC+ G + F
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDD-STFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTL 641
PD T NG+ +AL +N + E E D +T+
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV----------------DTVTYNTM 631
Query: 642 ADICVRAAFFRKALEIVACMEENGIPPNK 670
+ ++A ++++ MEE G+ P++
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 36/337 (10%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK--AGF-M 424
P+ ++ + Y+ G+ +++ + M R P+ ++ T++ LV+ + F +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRL---KLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
AR+V +M +IGVS N T+N+L+ GYC + +++ A +L M + ++ PD V+YN
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 485 LIDGCILVDDSAGALSFFNE----MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++ G LS E M+ G+ P +++Y L+ + G K A ++ E+
Sbjct: 246 ILKAM----SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-EL 300
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY-----GSFANGI 595
+ V DL +N+L+ G C G PDV TY G F G+
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 596 AL-ARKPGEAL---------------ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLD 639
+L ARK E + + W +E+ EA + + PD
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
TL ++ ALE++ M + GI N I
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 171/399 (42%), Gaps = 38/399 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V+ M ++ LP + ++ +++ L ++G E L L A+ + +
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK-----------SLKLQ 342
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +++ C G +L ++M GV + +++NI +K C++++++ +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 272 LERILE-QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD------------LC 318
++ +++ + T H+L+ AY+ GDL A +++ M +K LC
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 319 --RILRES----NSEYIGG--KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
R L E+ NS + G ++ + L+ + ++ + TP
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE-MKKVKITPTV 521
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
+ +L+ G G+ T +E +S PD ++ +++ K G +++A +
Sbjct: 522 STFNSLIGGLCHHGK---TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
E + + T NILL G CK+ +KA + E+ E+ D V+YN +I
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFC 636
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
A +EM +G+ P + +Y + + G+
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/493 (19%), Positives = 191/493 (38%), Gaps = 67/493 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V M++ G +V+ ++ +V+ G +ALG+ + +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK----------VN 237
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +L A + G +L +M + G+VP+ ++YN ++ C+ +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR-----------DLC-- 318
+E + + NV + T + L+ + G + ++ AM+ + D C
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 319 -------RILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLP-KPYTPNT 370
R L E E G K + V + + + L+ ++P+
Sbjct: 358 LGLSLEARKLME-QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAM----------------------RRQDDS-----A 403
Y TL+K Y+K G +S + M+ M R+ D++ +
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 404 SHP-----DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+H D V+Y T++ + +++A ++ EM ++ ++ T+N L+ G C +
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+ A E E+AE + PD ++N +I G A F+NE P +
Sbjct: 537 TELAMEKFDELAESG-LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
L+ G + A F+ ++ + +VD + +N ++ +C+
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 579 NGFHPDVGTYGSF 591
G PD TY SF
Sbjct: 654 KGLEPDRFTYNSF 666
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 173/386 (44%), Gaps = 31/386 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++V M+ GY P ++ ++ L + EA+ L + +R +
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-----------GCQ 215
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD + AV+N GD + L L ++M + + + Y+ V+ C+ +D + +
Sbjct: 216 PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ + V + T SL++ ++G A ++ M E++ +
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN--------------- 320
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
N F L+ + + +Y+ ++ + PN Y++L+ G+ R+ + +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEE-MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
MLE M R+D P+ V+Y T+++ KA +D+ ++ EM++ G+ N +TY L+
Sbjct: 380 MLELMIRKD---CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+ + D A+ + ++M + P++++YNIL+DG A A+ F ++ +
Sbjct: 437 GFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVF 537
P +Y +++ +G+ K+ F
Sbjct: 496 PDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 173/389 (44%), Gaps = 21/389 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD N++LN + + L D+M + G PD +++ ++ ++ V +
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++R++++ + T ++V GD D A ++ M + E+N
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI-------EANV----- 253
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
V + +S+ + + K PN Y++L+ GR SD R
Sbjct: 254 ----VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L M + +P+ V+++ ++ A VK G + +A ++ EM + + N TY+ L+
Sbjct: 310 LLSDMIERK---INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+C ++ +A+++L E+ + P+VV+YN LI+G + F EM RG+
Sbjct: 367 GFCMLDRLGEAKQML-ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
++YTTL+ F + A VF +MV+ V +++ +N+L++G C+ G
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARK 600
+ PD+ TY G+ A K
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 176/410 (42%), Gaps = 40/410 (9%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M++ GY P + +++++ +A+ L D V +PDT F
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL-----------VDQMVEMGYKPDTVTFT 187
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERI--- 275
+++ + L D M Q G PD ++Y V+ C++ DL + +L ++
Sbjct: 188 TLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 276 -LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+E NV + T + SL + D A + M K G + +
Sbjct: 248 KIEANVVIYSTVIDSLC----KYRHEDDALNLFTEMENK----------------GVRPN 287
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+ L + + ++ + PN ++ L+ ++K G++ ++ E
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
M ++ + P+ +Y+++++ + A+Q+L M R N +TYN L+ G+C
Sbjct: 348 EMIKR---SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 455 KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
K ++DK EL REM++ + + V+Y LI G D A F +M + G+ P
Sbjct: 405 KAKRVDKGMELFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
++Y L+ +G+ A VF E + ++ D+ +N+++EG C+ G
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 11/256 (4%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y P+T +TTL+ G + S+ V +++ M ++ PD V+Y VV+ L K G D
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR---GCQPDLVTYGAVVNGLCKRGDTD 235
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +L +M + AN + Y+ ++ CK D A L EM E+ ++P+V++Y+ L
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSL 294
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN--- 542
I + A ++M R I P ++++ L+ AF G+ A ++++EM+
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
DP ++ ++ L+ G+C L P+V TY + NG A++
Sbjct: 355 DP----NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 603 EALILWNEVKERWEAG 618
+ + L+ E+ +R G
Sbjct: 411 KGMELFREMSQRGLVG 426
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 2/209 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P + ++ ++SA+ K D +M +G+S N TYNIL+ +C+ ++ A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L +M + +PD+V+ N L++G + + A++ ++M G P +++TTL+
Sbjct: 136 LGKMMKLG-YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
L + A + D MV + DL+ + +V G C+ G +V
Sbjct: 195 LHNKASEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV 253
Query: 586 GTYGSFANGIALARKPGEALILWNEVKER 614
Y + + + R +AL L+ E++ +
Sbjct: 254 VIYSTVIDSLCKYRHEDDALNLFTEMENK 282
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 166/377 (44%), Gaps = 21/377 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD F ++LN + + + LFD++ G P+ ++Y +++ C+ + V +
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++ + T ++LV + G A +++ M ++R +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE--------------- 255
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
N F L+ + +Y + Y P+ Y +L+ G G + + +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQ 314
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
M M R + +P+ V YTT++ K+ ++ ++ EM++ GV AN ITY +L++
Sbjct: 315 MFYLMER---NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GYC + D A+E+ +M+ PD+ +YN+L+DG AL F MR R +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSS-RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
++YT +++ G+ + A +F + + +K ++I + ++ G+CR G
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG-MKPNVITYTTMISGFCRRGLIHEADS 489
Query: 572 XXXXXXXNGFHPDVGTY 588
+GF P+ Y
Sbjct: 490 LFKKMKEDGFLPNESVY 506
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 179/421 (42%), Gaps = 24/421 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F +L+ A + + LF++M G+ P + NIVM C +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTA-----EIIVQAMREKR-------RDLCR 319
L ++++ + T SL+ Y + ++ A +I+ + R LC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 320 ILRESNSEYI-------GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
+++ + G + + V L + + ++ + PN
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+T L+ ++K G++ + + M + + +PD +Y ++++ L G +D ARQ+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQM---SVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M R G N + Y L+ G+CK +++ ++ EM++ + + ++Y +LI G LV
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG-VVANTITYTVLIQGYCLV 376
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A FN+M +R P +Y L+ +G+ + A +F+ M + ++++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM-RKREMDINIVT 435
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+ ++++G C+LG G P+V TY + +G EA L+ ++K
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 613 E 613
E
Sbjct: 496 E 496
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 25/333 (7%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L + PN YTTL++ K+ ++ V + M + S P+ V+Y +V+ L +
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM---GTNGSRPNVVTYNALVTGLCE 235
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G A +L +M + + N IT+ L+ + K ++ +A+EL M + + PDV
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ-MSVYPDVF 294
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y LI+G + A F M G P ++ YTTL+ F S + + ++F EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
+ V + I + +L++GYC +G PD+ TY +G+ K
Sbjct: 355 -SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 601 PGEALILWNEVKER----------------WEAGRDRENSDSSVP----PLKPDEGLLDT 640
+AL+++ +++R + G+ + D +KP+ T
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 641 LADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
+ R +A + M+E+G PN++ +
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 19/285 (6%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L+ R S P + +T ++S + K D + +M +G+ T NI++
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
C Q +A L +M + +PD+V++ L++G + A++ F+++ G P
Sbjct: 128 VCLSSQPCRASCFLGKMMKLG-FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEM-VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
++YTTL++ + A +F++M N R V + +N LV G C +G
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV--VTYNALVTGLCEIGRWGDAAW 244
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
P+V T+ + + K EA L+N + + +
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM---------------SV 289
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
PD +L + +A ++ ME NG PN+ +T +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/539 (21%), Positives = 207/539 (38%), Gaps = 60/539 (11%)
Query: 159 MLRSGYLPH-VKAWSAVVSRLASSGDSVEALGLFRAVTRR------------LRKITDPD 205
+ R G P V A V+ L G+ +AL R V R L+ ++
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ 266
Query: 206 VAADSR-----------PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNI 254
+ SR P+ F ++N G+ LF M Q G+ PD ++Y+
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 255 VMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR 314
++ + + + + L + V L + S + YV GDL TA ++ + M
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM---- 382
Query: 315 RDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYT 374
LC+ G + V +L + Q +L + P+ Y+
Sbjct: 383 --LCQ----------GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
+L+ G+ K G + + E M + PD V Y +V L K G M A + +M
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKM---GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDD 494
+ N + +N L+ G+C+ + D+A ++ R M I+PDV ++ ++ I+
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGR 546
Query: 495 SAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWN 554
AL F M G+ P ++Y TL+ AF +P + ++FD M + ++ D+ N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCN 605
Query: 555 MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
+++ + PD+ TY + G R+ EA ++ +K
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK-- 663
Query: 615 WEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
V P P+ L L + + A+ + + M E G PN +
Sbjct: 664 -------------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 189/469 (40%), Gaps = 69/469 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A+ V K ML G P+V ++ ++ L G EA G++ + +R
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-----------GME 423
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P ++++++ G+ + L+++M + G PD + Y +++ ++ L++
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD---GLSKQGLMLHA 480
Query: 272 LE---RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ ++L Q++ L + +SL+ + D A + + M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM----------------GI 524
Query: 329 IGGKND-SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
G K D + F ++ S+ + ++ + P+ Y TL+ + K + +
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFR-MFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 388 DTVRMLEAMRRQDDSAS--------------------------------HPDHVSYTTVV 415
+++ + M+R SA PD V+Y T++
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+D A ++ + N +T IL+ CK +D A + MAE
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS- 702
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
+P+ V+Y L+D D G+ F EM+ +GI+P+ +SY+ ++ G+ A
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 536 VFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
+F + + D ++ D++A+ +L+ GYC++G NG PD
Sbjct: 763 IFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 41/428 (9%)
Query: 281 PLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD---------LCRILRESNSEYIGG 331
P+C + +L+ Y D G + A + R+ R D L R+++ + + I G
Sbjct: 167 PMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWG 226
Query: 332 -----------KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
N VF L+ + V+ + + P + TL+ GY
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDE-ITKRSLQPTVVSFNTLINGY 285
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
K G + + R+ M + S + PD +Y+ +++AL K MD A + EM + G+
Sbjct: 286 CKVGNLDEGFRLKHQMEK---SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
N + + L+ G+ + +ID +E ++M +QPD+V YN L++G D A +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG-LQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+ M RG+ P KI+YTTL+ F G + A + EM + +++D + ++ LV G
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM-DQNGIELDRVGFSALVCGM 460
Query: 561 CRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRD 620
C+ G G PD TY + K G+A + +KE
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC---KKGDAQTGFKLLKEM------ 511
Query: 621 RENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEM 680
SD VP + LL+ L + + A ++ M G+ P+ + +
Sbjct: 512 --QSDGHVPSVVTYNVLLNGLC----KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Query: 681 HSRMFTSK 688
H +SK
Sbjct: 566 HRHANSSK 573
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 159/365 (43%), Gaps = 31/365 (8%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
+L +G+ +V ++ ++++ G+ +A +F +T+R +P +FN
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR-----------SLQPTVVSFN 279
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++N G+ +L +M + PD +Y+ ++ C++++ D + + + ++
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
+ +L+ + G++D + Q M K G + D V
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK----------------GLQPDIVLY 383
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L N ++ ++ + P+ YTTL+ G+ + G D LE +
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG---DVETALEIRKE 440
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
D + D V ++ +V + K G + A + L EM R G+ + +TY +++ +CK+
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+LL+EM D + P VV+YN+L++G + A + M G+ P I+Y
Sbjct: 501 AQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 519 TLMKA 523
TL++
Sbjct: 560 TLLEG 564
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/529 (19%), Positives = 223/529 (42%), Gaps = 47/529 (8%)
Query: 149 TLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA 208
T +A V+ ML+ G+ +V + ++ L + + +A+ L R + R
Sbjct: 123 TGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN----------- 171
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
PD ++N V+ + + L+L +EM G +++ I++ C+ + D
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ L+ + + + SL+ + D G+LD + + + E+ C I
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-------- 283
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
+ L+ +++ ++ + PN YT L+ G G+ +
Sbjct: 284 -------TYNTLIRGFCKLGQLKEASEIFE-FMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+++L M +D+ P+ V+Y +++ L K G + A +++ M + + ITYNI
Sbjct: 336 ALQLLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 449 LLKGYCKQLQIDKARELLREMAEDAE-IQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
LL G C + +D+A +LL M +D+ PDV+SYN LI G + AL ++ +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
+ A +++ L+ + +G A ++ + ++D ++ + + +++G+C+ G
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ-ISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSS 627
+ P V Y + + +A L+ E++ R+N+
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ--------RDNN--- 560
Query: 628 VPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
PD + + D ++A + A ++ M G+ P+ ++++
Sbjct: 561 ----FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 31/392 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
++ +L G P ++ ++ G EA +F + R R
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER-----------GVR 314
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ + +++ G K LQL + M + P+A++YNI++ C+ V +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+E + ++ T + L+ GDLD A ++ M + +S Y
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK------------DSSYTDP 422
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTT-LMKGYMKSGRVSDTV 390
S + L+ ++ +Y LL + R+ T L+ +K+G V+
Sbjct: 423 DVIS-YNALIHGLCKENRLHQALDIYD--LLVEKLGAGDRVTTNILLNSTLKAGDVN--- 476
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ +E ++ DS + +YT ++ K G ++ A+ +L +M + + YN LL
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
CK+ +D+A L EM D PDVVS+NI+IDG + D A S M G+
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
+P +Y+ L+ F G A FD+MV+
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 117/261 (44%), Gaps = 49/261 (18%)
Query: 397 RRQDDSASHPDHVSYTTVVSALV---KAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
R+ ++ + + VS + ++ V K GF A VLA M + G + N +NILLKG
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGF---AFGVLALMLKRGFAFNVYNHNILLKGL 152
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILI---------------------DGC--- 489
C+ L+ KA LLREM ++ + PDV SYN +I GC
Sbjct: 153 CRNLECGKAVSLLREMRRNS-LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 490 -----ILVDD--SAG----ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD 538
IL+D AG A+ F EM+ G+ + YT+L++ F G+ +FD
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 539 EMV---NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
E++ + P I +N L+ G+C+LG G P+V TY +G+
Sbjct: 272 EVLERGDSPCA----ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 596 ALARKPGEALILWNEVKERWE 616
K EAL L N + E+ E
Sbjct: 328 CGVGKTKEALQLLNLMIEKDE 348
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 155/367 (42%), Gaps = 41/367 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A+ + + M+ G P+V ++ ++ L G + EAL L + + D
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-----------DEE 349
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK---DRKDLL 268
P+ +N ++N G +++ + M + PD ++YNI++ C K D L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 269 VFVLERILEQNVPLCMT---TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESN 325
++++ + P ++ +H L LD +++V+ +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL--------------- 454
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
G D V +L NS ++ + N+ YT ++ G+ K+G
Sbjct: 455 -----GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
++ +L MR S P Y ++S+L K G +D+A ++ EM R + ++
Sbjct: 510 LNVAKGLLCKMRV---SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+NI++ G K I A LL M+ A + PD+ +Y+ LI+ + + A+SFF++M
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSR-AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 506 RARGIAP 512
G P
Sbjct: 626 VDSGFEP 632
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 30/372 (8%)
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD-LLVFVLERILEQNVPLCMTT 286
G+ + L ++D+M F V PD + +IV+ CR D +VF E + L + T
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 287 LHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMN 346
+SL+ Y GD++ +++ M E+ +N + L+
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVS---------------RNVVTYTSLIKGYCK 308
Query: 347 QSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR----MLEAMRRQDDS 402
+ V++ L K + +Y LM GY ++G++ D VR M+E R + +
Sbjct: 309 KGLMEEAEHVFE-LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
+ ++++ K+G + A Q+ + M + + TYN L+ GYC+ +D+A
Sbjct: 368 ICN-------SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
+L +M + E+ P V++YNIL+ G + LS + M RG+ +IS +TL++
Sbjct: 421 LKLCDQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479
Query: 523 AFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFH 582
A G A ++++ ++ + D I N+++ G C++
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLL-TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 583 PDVGTYGSFANG 594
P V TY + ++G
Sbjct: 539 PAVQTYQALSHG 550
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 20/321 (6%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K ++ + ++ ++K Y + G V + + + + M + P +S +++S LV+ G
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVFDNM---GNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
A V +M VS + T +I++ YC+ +DKA +E ++ +VV+YN
Sbjct: 206 NFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
LI+G ++ D G M RG++ ++YT+L+K + G + A VF E++ +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKE 324
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
++ D + +L++GYCR G G + S NG + + E
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 604 ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEE 663
A +++ + + W LKPD +TL D RA + +AL++ M +
Sbjct: 385 AEQIFSRMND-W--------------SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 664 NGIPPNKTKFTRIYVEMHSRM 684
+ P + I ++ +SR+
Sbjct: 430 KEVVPTVMTYN-ILLKGYSRI 449
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 183/446 (41%), Gaps = 34/446 (7%)
Query: 167 HVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACAN 226
+V ++++++ A GD VE + TR LR +++ V+ + + +++
Sbjct: 260 NVVTYNSLINGYAMIGD-VEGM------TRVLRLMSERGVS----RNVVTYTSLIKGYCK 308
Query: 227 SGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTT 286
G + +F+ + + +V D Y ++M CR + V V + ++E V T
Sbjct: 309 KGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 287 LHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMN 346
+SL+ Y G L AE I M + L+ + Y L +
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWS------LKPDHHTY----------NTLVDGYC 412
Query: 347 QSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHP 406
++ + K P Y L+KGY + G D + + + M ++ +A
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA--- 469
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D +S +T++ AL K G + A ++ + G+ + IT N+++ G CK ++++A+E+L
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK-AFA 525
+ +P V +Y L G V + A + M +GI PT Y TL+ AF
Sbjct: 530 -DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
K+A V + + + + + L+ G+C +G G +V
Sbjct: 589 YRHLNKVADLVIE--LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Query: 586 GTYGSFANGIALARKPGEALILWNEV 611
AN + K EA +L ++
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKI 672
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K PN +Y + G K+G++ D ++ + D PD +YT ++ AG
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI--PDEYTYTILIHGCAIAGD 770
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+++A + EM G+ N +TYN L+KG CK +D+A+ LL ++ + I P+ ++YN
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG-ITPNAITYN 829
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIA 511
LIDG + + A A+ +M +G+
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/536 (19%), Positives = 213/536 (39%), Gaps = 74/536 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V +M+ G + +++++ SG VEA +F ++ D + +
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS-------RMNDWSL----K 398
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +++ +G L+L D+M Q VVP ++YNI++K R ++ +
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR 319
+ +L++ V + +L+ A GD + A + + + + LC+
Sbjct: 459 WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 320 ILRESNSEYIGGKNDSVFQ--------KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTR 371
+ + + ++ I N ++F+ + L + + + + K P
Sbjct: 519 MEKVNEAKEIL-DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+Y TL+ G K ++ ++ +R + + P +Y +++ G +D+A
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLT---PTVATYGALITGWCNIGMIDKAYATC 634
Query: 432 AEMTRIGVSANR--------------------------ITYNILLKGY--CKQLQIDKAR 463
EM G++ N + +++LL GY K+ A
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASAT 694
Query: 464 ELLR--EMAEDAE-------IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG-IAPT 513
L+ ++AE E + P+ + YN+ I G A F+++ + P
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD 754
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
+ +YT L+ A++G A + DEM + +++ +N L++G C+LG
Sbjct: 755 EYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP-NIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 574 XXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVP 629
G P+ TY + +G+ + EA+ L ++ E+ + D +P
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIP 869
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 174/414 (42%), Gaps = 37/414 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M G P +++ V+S + G E R + R
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAERFE------------ 243
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +NA++N D K +L EM + G+ P+ +SY+ ++ + C + +L
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 272 LERILEQNVPLCMTTLHSLV-AAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
L ++L++ + TL SLV ++ D ++ Q +R +
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG---------------FGL 348
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
N + L+ + V+ + +PN R Y +L+ G+ K G + V
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSH-MEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ M S P+ V YT +V AL + A ++ M++ + + T+N +
Sbjct: 408 YIWNKML---TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
KG C ++D A ++ R+M + P++V+YN L+DG + A E+ RG+
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+ +Y TL+ +G P +A ++ +M+ D + D I NM++ YC+ G
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQG 577
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 170/426 (39%), Gaps = 35/426 (8%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
F +V++ G + +++F + +FG P YN V+ ++R ++ V +
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV 336
+ T + L+ A +D A+ ++ M K G D+V
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK----------------GCCPDAV 217
Query: 337 FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM 396
+ +SM + V + L + + P +Y L+ G K D E M
Sbjct: 218 SYTTVISSMCE-----VGLVKEGRELAERFEPVVSVYNALINGLCKE---HDYKGAFELM 269
Query: 397 RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ 456
R + P+ +SY+T+++ L +G ++ A L +M + G N T + L+KG +
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKIS 516
A +L +M +QP+VV+YN L+ G + A+S F+ M G +P +
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXX 576
Y +L+ FA G A ++++M+ +++ + +VE CR
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCP-NVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 577 XXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEG 636
P V T+ +F G+ A + + W E + R E P +
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGR-----LDWAE-----KVFRQMEQQHRCPPNIVTYNE 498
Query: 637 LLDTLA 642
LLD LA
Sbjct: 499 LLDGLA 504
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 155/398 (38%), Gaps = 28/398 (7%)
Query: 212 PDTGAFNAVLNA-CANSG-DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
P+ +N +L A C N+ DG +L EM G PDA+SY V+ C LV
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAK--KLLVEMSNKGCCPDAVSYTTVISSMCEVG----LV 232
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+ E+ P+ ++ ++L+ D A +++ M EK
Sbjct: 233 KEGRELAERFEPV-VSVYNALINGLCKEHDYKGAFELMREMVEK---------------- 275
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G + + L N + S + +L + PN ++L+KG G D
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ + M R P+ V+Y T+V G + +A V + M IG S N TY L
Sbjct: 336 LDLWNQMIR--GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G+ K+ +D A + +M P+VV Y +++ A S M
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSG-CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
AP+ ++ +K +G+ A +VF +M R +++ +N L++G +
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 570 XXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
G TY + +G A PG AL L
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 157/384 (40%), Gaps = 74/384 (19%)
Query: 149 TLYAASVVKSMLRS-GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
T A + M+R G P+V A++ +V S G+ V+A+ +F +
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE----------- 380
Query: 208 ADSRPDTGAFNAVLNACANSG--DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRK 265
P+ + +++N A G DG +++ +++M G P+ + Y +++ CR +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYI--WNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 266 DLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESN 325
++E + ++N + T ++ + D G LD AE + + M ++ R
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR---------- 488
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
PN Y L+ G K+ R
Sbjct: 489 ----------------------------------------CPPNIVTYNELLDGLAKANR 508
Query: 386 VSDTVRMLEA--MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
+ + + MR + S+S +Y T++ AG A Q++ +M G S +
Sbjct: 509 IEEAYGLTREIFMRGVEWSSS-----TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDA-EIQPDVVSYNILIDGCILVDDSAGALSFF 502
IT N+++ YCKQ + ++A ++L ++ + +PDV+SY +I G + +
Sbjct: 564 ITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILL 623
Query: 503 NEMRARGIAPTKISYTTLMKAFAL 526
M + GI P+ +++ L+ F L
Sbjct: 624 ERMISAGIVPSIATWSVLINCFIL 647
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 168/381 (44%), Gaps = 24/381 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV- 269
+P+ FN V+NA +G + ++M +G P+ +SYN ++ C+ +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 270 --FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
VL+ ++E +V +TT + L+ + +L + + + M + +D+
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD--QDV---------- 327
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
K + + L N + + ++ PN Y L+ G+ K+ +
Sbjct: 328 ----KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + M +++ Q + P Y ++ A K G +D + EM R G+ + TYN
Sbjct: 384 EALDMFGSVKGQ---GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
L+ G C+ I+ A++L ++ PD+V+++IL++G +S A EM
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
G+ P ++Y +MK + G K A + +M + R+++++ ++N+L++GY + G
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 568 XXXXXXXXXXXNGFHPDVGTY 588
G P+ TY
Sbjct: 559 DANMLLNEMLEKGLVPNRITY 579
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 58/364 (15%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT 435
LM +K R +D + + M R+ P+ ++ V++AL K G M++AR V+ +M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRR---KIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250
Query: 436 RIGVSANRITYNILLKGYCK---QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
G S N ++YN L+ GYCK ++ KA +L+EM E+ ++ P++ ++NILIDG
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN-DVSPNLTTFNILIDGFWKD 309
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN---------- 542
D+ G++ F EM + + P ISY +L+ G+ A + D+MV+
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 543 ----DPRVKVDLIA--------------------WNMLVEGYCRLGXXXXXXXXXXXXXX 578
+ K D++ +NML++ YC+LG
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 579 NGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLL 638
G PDVGTY G+ A L++++ + PD
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG----------------LPDLVTF 473
Query: 639 DTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRR 698
L + R RKA ++ M + G+ P + I ++ + + K A+ R
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN-IVMKGYCKEGNLKAATNMRTQME 532
Query: 699 VERK 702
ER+
Sbjct: 533 KERR 536
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 47/386 (12%)
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
A AN+ ++ + F +G ALS +M +++R + +V + ++ + +
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP 221
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG----------- 331
+ T + ++ A G ++ A +++ M+ C S + I G
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYG---CSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K D+V ++++ N + +PN + L+ G+ K + +++
Sbjct: 279 KADAVLKEMVENDV---------------------SPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + M QD P+ +SY ++++ L G + A + +M GV N ITYN L+
Sbjct: 318 VFKEMLDQD---VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG-CIL--VDDSAGALSFFNEMRAR 508
G+CK + +A ++ + + P YN+LID C L +DD + EM
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKIDD---GFALKEEMERE 430
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
GI P +Y L+ +G + A ++FD++ + + DL+ +++L+EGYCR G
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS--KGLPDLVTFHILMEGYCRKGESRK 488
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANG 594
G P TY G
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 134/332 (40%), Gaps = 68/332 (20%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
V K ML P+V +++++++ L + G EA+ + D V+A +P+
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM-----------RDKMVSAGVQPNL 366
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+NA++N + K L +F + G VP YN+++ C+ + D + E
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+ + + + T + L+A G+++ A+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAK------------------------------ 456
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+F +L + P+ + LM+GY + G +L+
Sbjct: 457 KLFDQLTSKGL----------------------PDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRI-GVSANRITYNILLKGY 453
M + P H++Y V+ K G + A + +M + + N +YN+LL+GY
Sbjct: 495 EMSKM---GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
++ +++ A LL EM E + P+ ++Y I+
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLV-PNRITYEIV 582
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 193/471 (40%), Gaps = 42/471 (8%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P V ++ +++ L +G EA+ LF + ++ P+T FN + +
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-----------GCPPNTITFNTLFDCLC 619
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYN-IVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
+ + + L++ +M G VPD +YN I+ L K+ + F + +++ V
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ--MKKLVYPDF 677
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD----------LCRILRESN--------- 325
TL +L+ V ++ A I+ D + IL E+
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 326 ---SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
+ I DS+ ++ S + +++ P Y L+ G ++
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 383 SGRVSDTVRMLEAMRRQDDSASH-PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
+ D + + + + Q S PD +Y ++ A K+G +D ++ EM+ A
Sbjct: 798 A----DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 853
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
N IT+NI++ G K +D A +L ++ D + P +Y LIDG A
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
F M G P Y L+ F +G+ A +F MV + V+ DL +++LV+ C
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLC 972
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+G +G +PDV Y NG+ + + EAL+L+NE+K
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 207/526 (39%), Gaps = 82/526 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M G++ + +++ ++ L S EA+ ++R + + R
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-----------ILEGFR 220
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +++++ D + L EM G+ P+ ++ I +++ R + + +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+R+ ++ + T L+ A LD A+ + + M+ R
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR----------------- 323
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ P+ Y TL+ + R D+V+
Sbjct: 324 ----------------------------------HKPDRVTYITLLDRF-SDNRDLDSVK 348
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ +D PD V++T +V AL KAG A L M G+ N TYN L+
Sbjct: 349 QFWSEMEKDGHV--PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G + ++D A EL M E ++P +Y + ID DS AL F +M+ +GIA
Sbjct: 407 GLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P ++ + + A +G+ + A ++F + D + D + +NM+++ Y ++G
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
NG PDV S N + A + EA ++ +KE L
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM---------------KL 569
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIY 677
KP +TL + ++A+E+ M + G PPN F ++
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 193/494 (39%), Gaps = 61/494 (12%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V + M+ G+ P ++ +S+++ L D +GL + + +
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME-----------TLGLK 255
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ F + +G ++ M G PD ++Y +++ C + D V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E++ T +L+ + D DLD+ + Q E +D G
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK---QFWSEMEKD-------------GH 359
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS-------- 383
D V +L +++ ++ + + PN Y TL+ G ++
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 384 ------------------------GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALV 419
G+ D+V LE + P+ V+ + +L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 420 KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDV 479
KAG A+Q+ + IG+ + +TYN+++K Y K +ID+A +LL EM E+ +PDV
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG-CEPDV 538
Query: 480 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
+ N LI+ D A F M+ + PT ++Y TL+ +G+ + A +F+
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALAR 599
MV + I +N L + C+ G PDV TY + G+
Sbjct: 599 MVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 600 KPGEALILWNEVKE 613
+ EA+ ++++K+
Sbjct: 658 QVKEAMCFFHQMKK 671
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+Y + + ++P Y L+ G KSGR+ + ++ E M D P+ Y ++
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML---DYGCRPNCAIYNILI 933
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+ KAG D A + M + GV + TY++L+ C ++D+ +E+ E +
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG-L 992
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMR-ARGIAPTKISYTTLMKAFALSGQPKLAH 534
PDVV YN++I+G AL FNEM+ +RGI P +Y +L+ ++G + A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
++++E + ++ ++ +N L+ GY G GF P+ GTY N
Sbjct: 1053 KIYNE-IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/484 (20%), Positives = 201/484 (41%), Gaps = 38/484 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M+ +G P V +++++ L + EA +F R++++ +
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM----RMKEMK-------LK 570
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +N +L +G + ++LF+ M Q G P+ +++N + C+ D L + +
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE----KRRDLCRILRESNSE 327
L ++++ + T ++++ V G + A M++ LC +L
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKA 690
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT----------------- 370
+ + L N +Q + +L + N
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGS-ILAEAGIDNAVSFSERLVANGICRDGD 749
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
I +++ K VS + E + D P +Y ++ L++A ++ A+ V
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTK--DLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
++ G + TYN LL Y K +ID+ EL +EM+ E + + +++NI+I G +
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH-ECEANTITHNIVISGLV 866
Query: 491 LVDDSAGALS-FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
+ AL +++ M R +PT +Y L+ + SG+ A ++F+ M+ D + +
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCRPN 925
Query: 550 LIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
+N+L+ G+ + G G PD+ TY + + + + E L +
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 610 EVKE 613
E+KE
Sbjct: 986 ELKE 989
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/606 (20%), Positives = 236/606 (38%), Gaps = 112/606 (18%)
Query: 77 TEEAWIAYTQCTHLPNPTCLSRLVSQL----SYHNTLPSL--TRAQSILTRLRNERQL-- 128
++ W + H+P+ + LV L ++ +L R Q IL L L
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 129 -----HRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGD 183
HRLD A + +M G P + + SGD
Sbjct: 407 GLLRVHRLDD------------------ALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 184 SVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQF 243
SV AL F K+ +A P+ A NA L + A +G + Q+F +
Sbjct: 449 SVSALETFE-------KMKTKGIA----PNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 244 GVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
G+VPD+++YN++MK + D + +L ++E + ++SL+ +D A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 304 EIIVQAMREKRRDLCRILRESNSEYIG-GKNDSV------FQKLL-----PNSM------ 345
+ M+E + L + N+ G GKN + F+ ++ PN++
Sbjct: 558 WKMFMRMKEMK--LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 346 -----NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQD 400
N +++ ++ P+ Y T++ G +K+G+V + + M++
Sbjct: 616 DCLCKNDEVTLALKMLFK--MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-- 671
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAE---------------------MTRIGV 439
+PD V+ T++ +VKA ++ A +++ + G+
Sbjct: 672 --LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGI 729
Query: 440 S-----ANRITYNI-----------LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+ R+ N +++ CK + AR L + +D +QP + +YN
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+LI G + D A F ++++ G P +Y L+ A+ SG+ ++ EM +
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-ST 848
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXN-GFHPDVGTYGSFANGIALARKPG 602
+ + I N+++ G + G + F P TYG +G++ + +
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 603 EALILW 608
EA L+
Sbjct: 909 EAKQLF 914
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
NT + ++ G +K+G V D + + + D + P +Y ++ L K+G + A+
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS--PTACTYGPLIDGLSKSGRLYEAK 911
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
Q+ M G N YNIL+ G+ K + D A L + M ++ ++PD+ +Y++L+D
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDC 970
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+V L +F E++ G+ P + Y ++ S + + A +F+EM +
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
DL +N L+ G G P+V T+ + G +L+ KP A ++
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 13/250 (5%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y L+ Y KSG++ + + + M + A + +++ V+S LVKAG +D A
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA---NTITHNIVISGLVKAGNVDDA 874
Query: 428 RQVLAE-MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
+ + M+ S TY L+ G K ++ +A++L M D +P+ YNILI
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCRPNCAIYNILI 933
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+G ++ A + F M G+ P +Y+ L+ + G+ F E+ + +
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGL 992
Query: 547 KVDLIAWNMLVEGYCRLGXX----XXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
D++ +N+++ G LG G PD+ TY S + +A
Sbjct: 993 NPDVVCYNLIING---LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 603 EALILWNEVK 612
EA ++NE++
Sbjct: 1050 EAGKIYNEIQ 1059
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 133/365 (36%), Gaps = 60/365 (16%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
+T Y T+ K G + L MR + + SY ++ L+K+ F A
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMR---EFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA------------------ 470
+V M G + TY+ L+ G K+ ID LL+EM
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 471 ----------------EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
+D PDVV+Y +LID A F +M+ P +
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXX 574
++Y TL+ F+ + + + EM D V D++ + +LV+ C+ G
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 575 XXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPD 634
G P++ TY + G+ + +AL L+ ++ +KP
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG---------------VKPT 432
Query: 635 EGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRAR 694
D ++ ALE M+ GI PN V ++ +++ A R R
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN-------IVACNASLYSLAKAGRDR 485
Query: 695 QDRRV 699
+ +++
Sbjct: 486 EAKQI 490
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 42/395 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +++ +R G LP V ++ ++ EA AVTRR+R+ A
Sbjct: 32 AETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY----AVTRRMRE-------AGIE 80
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N++++ A + LQLFDEM G+ PD SYN +M C K + F
Sbjct: 81 PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS-CYFKLGRHGEAF- 138
Query: 272 LERILEQNVPLC-----MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNS 326
+IL +++ L + T + L+ A G D A + + ++ +
Sbjct: 139 --KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRV------------ 184
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
K + + +L N + +S L YTPN YTT++K Y K+ R+
Sbjct: 185 -----KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRI 239
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV-SANRIT 445
+++ M+++ + D + VVSAL+K G + A + + E+ R G S + ++
Sbjct: 240 EKGLQLFLKMKKEGYTF---DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVS 296
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YN LL Y K +D +LL E+ E ++PD ++ I+++G + + ++ GA +
Sbjct: 297 YNTLLNLYFKDGNLDAVDDLLEEI-EMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
G+ P+ ++ L+ +G A R+F M
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
V++L K ++RA +L + R+GV + ITYN L+KGY + + ID+A + R M E A
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE-AG 78
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
I+PDV +YN LI G L F+EM G++P SY TLM + G+ A
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
++ E ++ + + +N+L++ C+ G P++ TY NG
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILING 197
Query: 595 IALARKPGEALILWNEVKE 613
+ +R+ G + E+K+
Sbjct: 198 LCKSRRVGSVDWMMRELKK 216
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 41/273 (15%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y +L+ G K+ ++ +++ + M S PD SY T++S K G A
Sbjct: 81 PDVTTYNSLISGAAKNLMLNRVLQLFDEMLH---SGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 428 RQVLAEMTRI-GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
++L E + G+ TYNILL CK D A EL + + + ++P++++YNILI
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL--KSRVKPELMTYNILI 195
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK------------------------ 522
+G E++ G P ++YTT++K
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 523 -----------AFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
A +G+ + A+ E+V D++++N L+ Y + G
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
G PD T+ NG+ G A
Sbjct: 316 LLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 32/347 (9%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDV-AADSRPDTGAF 217
ML SG P + +++ ++S G EA KI D+ A P +
Sbjct: 109 MLHSGLSPDMWSYNTLMSCYFKLGRHGEAF-----------KILHEDIHLAGLVPGIDTY 157
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
N +L+A SG ++LF + V P+ ++YNI++ C+ R + +++ + +
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVF 337
T +++ Y T I EK L +++ + G N +V
Sbjct: 217 SGYTPNAVTYTTMLKMY-----FKTKRI------EKGLQLFLKMKKEGYTFDGFANCAVV 265
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
L+ + + + + Y TL+ Y K G + +LE +
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVS----YNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
+ PD ++T +V+ L+ G A + LA + +G+ + +T N L+ G CK
Sbjct: 322 MK---GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
+D+A L M E V +N+ DG LV S LS +N+
Sbjct: 379 HVDRAMRLFASMEVRDEFTYTSVVHNLCKDG-RLVCASKLLLSCYNK 424
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 206/495 (41%), Gaps = 58/495 (11%)
Query: 172 SAVVSRLASSGD--SVEAL-------------GLFRAVTRRLRKITDPDVAAD------- 209
S+++ A+SGD SVE L F V R K PD A D
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 210 ---SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQ----FGVVPDALSYNIVMKLCCRK 262
+ +FN+VLN N G L+ +D + + P+ LS+N+V+K C+
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE---------- 312
D + V + E+ T +L+ +D A +++ M+
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 313 --------KRRDLCRILRESNSEYIGG--KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLL 362
K+ DL R+ + ++ ++ G N+ + L+ + + + ++
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER-MV 319
Query: 363 PKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG 422
PN Y TL+ G +K R +D VR+L +M ++ H + Y+ ++S L K G
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM---EERGYHLNQHIYSVLISGLFKEG 376
Query: 423 FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSY 482
+ A + +M G N + Y++L+ G C++ + ++A+E+L M + P+ +Y
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL-PNAYTY 435
Query: 483 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
+ L+ G A+ + EM G + K Y+ L+ G+ K A V+ +M+
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXN---GFHPDVGTYGSFANGIALAR 599
+K D +A++ +++G C +G PDV TY +G+ + +
Sbjct: 496 -IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 600 KPGEALILWNEVKER 614
A+ L N + +R
Sbjct: 555 DISRAVDLLNSMLDR 569
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P +N +++ GD +L D M G VP+ ++YN ++ C K + D V +
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCR---------ILR 322
LER++ T +L+ V A ++ +M E+ L + + +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 323 ESNSEYI----------GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
E +E G K + V +L + + + ++ PN
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y++LMKG+ K+G + V++ + M D + + Y+ ++ L G + A V +
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM--AEDAEIQPDVVSYNILIDGCI 490
+M IG+ + + Y+ ++KG C +D A +L EM E+ + QPDVV+YNIL+DG
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+ D + A+ N M RG P I+ T + +
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 194/453 (42%), Gaps = 38/453 (8%)
Query: 168 VKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
VK++++V++ + + G L + V + ++ + P+ +FN V+ A
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVV-------NSNMNMNISPNGLSFNLVIKALCKL 200
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
+++F MP+ +PD +Y +M C+++R D V +L+ + +
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCR----------ILRESN 325
+ L+ GDL +V M K LC + R +
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
S+ I ND + L+ + Q + + + Y N IY+ L+ G K G+
Sbjct: 321 SKCI--PNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYHLNQHIYSVLISGLFKEGK 377
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + + R+ + P+ V Y+ +V L + G + A+++L M G N T
Sbjct: 378 AEEAMSL---WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
Y+ L+KG+ K ++A ++ +EM + + Y++LIDG V A+ +++M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV--NDPRVKVDLIAWNMLVEGYCRL 563
GI P ++Y++++K G A +++ EM+ +P+ + D++ +N+L++G C
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
G PDV T +F N ++
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 154/397 (38%), Gaps = 41/397 (10%)
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMR-EKR----RDLCRILRESNSEYIGGKNDSVFQK 339
+TL S++ +Y + GD D+ E ++ +R E R R + R ++ K +F +
Sbjct: 78 STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 340 LLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ 399
++ + V + Y Y ++ M
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM------------------ 179
Query: 400 DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI 459
+ P+ +S+ V+ AL K F+DRA +V M + TY L+ G CK+ +I
Sbjct: 180 -NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 460 DKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTT 519
D+A LL EM + P V YN+LIDG D + M +G P +++Y T
Sbjct: 239 DEAVLLLDEMQSEG-CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 520 LMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXN 579
L+ L G+ A + + MV+ + D + + L+ G +
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPND-VTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 580 GFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLD 639
G+H + Y +G+ K EA+ LW ++ E+ KP+ +
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK---------------GCKPNIVVYS 401
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
L D R +A EI+ M +G PN ++ +
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 191/461 (41%), Gaps = 40/461 (8%)
Query: 85 TQCTHLPNPTCLSRLVSQLSYHNTLPSLTRAQSILTRLRNERQLHRLDAN--SXXXXXXX 142
QC LP+ SRL+S +S + ++ L + Q+ + N +
Sbjct: 73 VQCRPLPSIADFSRLLSAISK-------MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125
Query: 143 XXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKIT 202
A S + M++ G+ P + + ++++ +AL +F
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF----------- 174
Query: 203 DPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK 262
D V +P+ +N +++ S L L + M + G+ PD ++YN ++ C
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILR 322
R ++ + ++ + + T ++L+ A V G + AE + M + D
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD------ 288
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
D V LL + ++ K P+ Y+ L+ GY K
Sbjct: 289 ----------PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
S +V +++ M ++ + V+YT ++ +AG ++ A ++ M GV N
Sbjct: 339 SKKVEHGMKLFCEMSQR---GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
ITYN+LL G C +I+KA +L +M ++ + D+V+YNI+I G + A A +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNG-MDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+ +G+ P +YTT+M G + A +F +M D
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 170/411 (41%), Gaps = 70/411 (17%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F ++LN L +FD+M G P+ + YN ++ C+ + D + +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L R+ + + + T +SL++ G A +V M + RE +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK---------REIYPDVF-- 257
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
F L+ + + Y+ ++ + P+ Y+ L+ G R+ +
Sbjct: 258 ----TFNALIDACVKEGRVSEAEEFYEE-MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
M M + PD V+Y+ +++ K+ ++ ++ EM++ GV N +TY IL++
Sbjct: 313 MFGFMVSK---GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA--GALSFFNEMRARG 509
GYC+ +++ A E+ R M + P++++YN+L+ G L D+ AL +M+ G
Sbjct: 370 GYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHG--LCDNGKIEKALVILADMQKNG 426
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXX 569
+ ++Y +++ +G+ V D AW++ YC L
Sbjct: 427 MDADIVTYNIIIRGMCKAGE-----------VAD--------AWDI----YCSLN----- 458
Query: 570 XXXXXXXXXNGFHPDVGTY-----GSFANGI-----ALARKPGEALILWNE 610
G PD+ TY G + G+ AL RK E IL NE
Sbjct: 459 --------CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 13/260 (5%)
Query: 358 QPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSA 417
Q +L P+ N L+ + + ++S + L M + P V++ ++++
Sbjct: 106 QMQMLGIPH--NLCTCNILLNCFCRCSQLSLALSFLGKMIKL---GHEPSIVTFGSLLNG 160
Query: 418 LVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQP 477
+ + A + +M +G N + YN ++ G CK Q+D A +LL M +D I P
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG-IGP 219
Query: 478 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVF 537
DVV+YN LI G + A + M R I P ++ L+ A G+ A +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 538 DEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+EM+ DP D++ +++L+ G C G PDV TY NG
Sbjct: 280 EEMIRRSLDP----DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 595 IALARKPGEALILWNEVKER 614
++K + L+ E+ +R
Sbjct: 336 YCKSKKVEHGMKLFCEMSQR 355
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P ++ ++SA+ K D + +M +G+ N T NILL +C+ Q+ A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L +M + +P +V++ L++G D AL F++M G P + Y T++
Sbjct: 139 LGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
S Q A + + M D + D++ +N L+ G C G +PDV
Sbjct: 198 KSKQVDNALDLLNRMEKDG-IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 586 GTYGSFANGIALARKPGEALILWNEVKER 614
T+ + + + EA + E+ R
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRR 285
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 180/415 (43%), Gaps = 41/415 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+ +++ G+ P + ++ +V+ L L L V + K
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK----------- 386
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDL 267
PDT FNA++NA + SG+ +++F++M + G P A ++N ++K + ++ L
Sbjct: 387 PDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRL 446
Query: 268 LVFVL-ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNS 326
L +L + +L+ N C + LV A+ + ++ A IV M+
Sbjct: 447 LDMMLRDEMLQPNDRTC----NILVQAWCNQRKIEEAWNIVYKMQS-------------- 488
Query: 327 EYIGGKNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
G K D V F L + P +L PN R T++ GY + G+
Sbjct: 489 --YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + +R M+ + HP+ + +++ + MD +V+ M GV + +T
Sbjct: 547 MEEALRFFYRMK---ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
++ L+ + + + E+ +M E I PD+ +++IL G + A N+M
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGG-IDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
R G+ P + YT ++ + +G+ K A +V+ +M + +L + L+ G+
Sbjct: 663 RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 142/336 (42%), Gaps = 23/336 (6%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
L+ + + P+ YTTL+ + +L + + + + PD + + +++A +
Sbjct: 345 LIEEGHKPSLITYTTLVTALTRQKHFHS---LLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+G +D+A ++ +M G T+N L+KGY K +++++ LL M D +QP+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+ NIL+ A + +M++ G+ P +++ TL KA+A G A +
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG---IAL 597
+ +VK ++ +V GYC G G HP++ + S G I
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 598 ARKPGEALILWNE--VKERWEAGRDRENSDSSVPPLK---------------PDEGLLDT 640
GE + L E VK N+ SSV +K PD
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 641 LADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
LA RA KA +I+ M + G+ PN +T+I
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 167/392 (42%), Gaps = 29/392 (7%)
Query: 236 LFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYV 295
+F+ + + G P ++Y ++ R+ L+ ++ ++ + + ++++ A
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 296 DFGDLDTAEIIVQAMRE---------------------KRRDLCRILRESNSEYIGGKND 334
+ G+LD A I + M+E K + R+L + + ND
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 335 SVFQKLLPNSMNQSXXXXX-XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML 393
L+ NQ VY+ + P+ + TL K Y + G M+
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYK--MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
+ R + P+ + T+V+ + G M+ A + M +GV N +N L+KG+
Sbjct: 519 --IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
+D E++ ++ E+ ++PDVV+++ L++ V D + +M GI P
Sbjct: 577 LNINDMDGVGEVV-DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
+++ L K +A +G+P+ A ++ ++M V+ +++ + ++ G+C G
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQM-RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Query: 574 XXX-XXNGFHPDVGTYGSFANGIALARKPGEA 604
G P++ TY + G A++P +A
Sbjct: 695 KKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA 726
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 189/481 (39%), Gaps = 76/481 (15%)
Query: 175 VSR-LASSGDSVEALGLFRAVTRRLRKITDPDVAADSR--------PDTGAFNAVLNACA 225
VSR + S DS L + + RR R V D + PD + + C
Sbjct: 154 VSREMKCSPDSKACLSILNGLVRRRRF---DSVWVDYQLMISRGLVPDVHIYFVLFQCCF 210
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
G +L DEM G+ P+ Y I + CR ++ + + E + + V +
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 286 TLHSLVAAYVDFGDLDTA-----EIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKL 340
T +++ Y G++ A EI+V + N VF L
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELL--------------------PNVVVFGTL 310
Query: 341 LPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQD 400
+ ++ ++ PN +Y L+ G+ KSG + + V +L M +
Sbjct: 311 VDGFCKARELVTARSLF-VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
S PD +YT +++ L + A ++ +M + + TYN L+ GYCK+ ++
Sbjct: 370 LS---PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 461 KARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
+A +L EM ++P++++++ LIDG V D A+ + EM +GI P ++YT L
Sbjct: 427 QALDLCSEMTASG-VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 521 MKAFALSGQPKLAHRVFDEMV------NDP---------------RVKVDLI-------- 551
+ A K A R++ +M+ ND V +D
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 552 AWN-----MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
WN L+EG C+ G G PD+ +Y S G ++ + ++
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 607 L 607
L
Sbjct: 606 L 606
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y+ ++ GY K+G V + + + + P+ V + T+V KA + A
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE---LLPNVVVFGTLVDGFCKARELVTA 323
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
R + M + GV N YN L+ G+CK + +A LL EM E + PDV +Y ILI+
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILIN 382
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G + D A A F +M+ I P+ +Y +L+ + + A + EM V+
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG-VE 441
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
++I ++ L++GYC + G PDV TY + + EAL L
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 608 WNEVKE 613
++++ E
Sbjct: 502 YSDMLE 507
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 20/306 (6%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN IYT + + ++ + +M E M++ P+ +Y+ ++ K G + +A
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKH---GVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ E+ + N + + L+ G+CK ++ AR L M + + P++ YN LI
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG-VDPNLYVYNCLIH 347
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G + A+ +EM + ++P +YT L+ + Q A+R+F +M N+ R+
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIF 406
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
+N L+ GYC+ +G P++ T+ + +G R A+ L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
+ E+ ++ + PD L D + A ++AL + + M E GI
Sbjct: 467 YFEM---------------TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 668 PNKTKF 673
PN F
Sbjct: 512 PNDHTF 517
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 154/406 (37%), Gaps = 44/406 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAV----------------- 194
A + + M + G LP++ +SA++ +G+ +A GL++ +
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 195 ----TRRL---RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
R L R + V P+ +N +++ SG+ + L EM + P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
D +Y I++ C +D+ + +++ + + T +SL+ Y +++ A
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA---- 428
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
DLC + S E N F L+ N +Y + K
Sbjct: 429 -------LDLCSEMTASGVE----PNIITFSTLIDGYCNVRDIKAAMGLY-FEMTIKGIV 476
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ YT L+ + K + + +R+ M ++ HP+ ++ +V K G + A
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDML---EAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
E + N + + L++G C+ I +A +M I PD+ SY ++
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM-RSCGITPDICSYVSMLK 592
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
G + + +M GI P + L + + +G K A
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 22/304 (7%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y L+ + ++G+ + +++ M R +A P +Y +++A +G A
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLR---AAIAPSRSTYNNLINACGSSGNWREA 232
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+V +MT GV + +T+NI+L Y Q KA E+ + A+++PD ++NI+I
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIY 291
Query: 488 GCILVDDSAGALSFFNEMRAR--GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ S+ AL FN MR + P +++T++M +++ G+ + VF+ MV +
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG- 350
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+K +++++N L+ Y G NG PDV +Y N +R+PG+A
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA- 409
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
KE + R KP+ + L D F +A+EI ME++G
Sbjct: 410 ------KEVFLMMRKERR--------KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 666 IPPN 669
I PN
Sbjct: 456 IKPN 459
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 24/344 (6%)
Query: 199 RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKL 258
R + + VA +P+ ++NA++ A A G L + ++ Q G++PD +SY ++
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 259 CCRKDR--KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD 316
R + K VF++ R E+ P + T ++L+ AY G L A V+ R+ +D
Sbjct: 400 YGRSRQPGKAKEVFLMMR-KERRKP-NVVTYNALIDAYGSNGFLAEA---VEIFRQMEQD 454
Query: 317 LCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTL 376
G K + V L + ++S + NT Y +
Sbjct: 455 -------------GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 377 MKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
+ Y+ + + + + ++MR++ A D V++T ++S + A L EM
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKA---DSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 437 IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
+ + + Y+ +L Y KQ Q+ +A + +M + A +PDV++Y ++ +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
A F EM A GI P I+ + LM+AF GQP + D M
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 197/474 (41%), Gaps = 54/474 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A SV+ + ++G +P V +++ +++ S +A +F + + RK
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK----------- 422
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ +NA+++A ++G +++F +M Q G+ P+ +S ++ C R +K + V
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L + + L +S + +Y++ +L+ A + Q+MR+K+
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV---------------- 526
Query: 332 KNDSV-FQKLLPNSMNQSXX-XXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
K DSV F L+ S S + + L P T +Y++++ Y K G+V++
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK--EVYSSVLCAYSKQGQVTEA 584
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ M+ + PD ++YT+++ A + +A ++ EM G+ + I + L
Sbjct: 585 ESIFNQMKM---AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
++ + K Q L+ M E EI + + C + + A+ M
Sbjct: 642 MRAFNKGGQPSNVFVLMDLMREK-EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY- 699
Query: 510 IAPTKISYTT-LMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
+ I T ++ F SG+ + ++F +++ V ++L + +L+E +G
Sbjct: 700 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG-VGINLKTYAILLEHLLAVGNWRK 758
Query: 569 XXXXXXXXXXNGFHP------DVGTYGSFANGIALA----------RKPGEALI 606
G P D+ ++G + GI R GE LI
Sbjct: 759 YIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLESLRNKGEGLI 812
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 9/221 (4%)
Query: 368 PNTRIYTTLMKGYMKSGR-VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+ + ++ Y KSGR S + E M+ + PD ++ ++ L K G +
Sbjct: 246 PDLVTHNIVLSAY-KSGRQYSKALSYFELMK---GAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 427 ARQVLAEM--TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
A + M R + +T+ ++ Y + +I+ R + M + ++P++VSYN
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNA 360
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
L+ + S ALS +++ GI P +SYT L+ ++ S QP A VF M+
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKE 419
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
R K +++ +N L++ Y G +G P+V
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 27/381 (7%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDRKDLL- 268
RP ++LN + + L D M FG VP+ + YN V+ LC +D + L
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 269 -VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ +E+ + + T ++L++ + G A +++ M +++ D
Sbjct: 206 VFYCMEK---KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID----------- 251
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
N F L+ + + +Y+ ++ + PN Y +L+ G+ G +
Sbjct: 252 ----PNVIFFTALIDTFVKEGNLLEARNLYKE-MIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
D M + M + PD V+Y T+++ K+ ++ ++ EMT G+ + TYN
Sbjct: 307 DAKYMFDLMVSK---GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
L+ GYC+ +++ A+++ M D + PD+V+YNIL+D AL +++
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
+ I+Y +++ + + K A +F + VK D IA+ ++ G CR G
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-VKPDAIAYITMISGLCRKGLQR 481
Query: 568 XXXXXXXXXXXNGFHPDVGTY 588
+GF P Y
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 2/213 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P V+ ++++ + A ++ M G N + YN ++ G CK ++ A E+
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
M E I+ D V+YN LI G A +M R I P I +T L+ F
Sbjct: 207 FYCM-EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
G A ++ EM+ V ++ +N L+ G+C G G PDV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVP-NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 586 GTYGSFANGIALARKPGEALILWNEVKERWEAG 618
TY + G +++ + + L+ E+ + G
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 125/305 (40%), Gaps = 36/305 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
AA +++ M++ P+V ++A++ G+ +EA L++ + RR
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-----------SVV 286
Query: 212 PDTGAFNAVLNA-CANS--GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
P+ +N+++N C + GD K +FD M G PD ++YN ++ C+ R +
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAK---YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ + + Q + T ++L+ Y G L+ A+ + M +
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD---------------- 387
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
G D V +L + + + V L + Y +++G ++ ++ +
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ ++ R+ PD ++Y T++S L + G A ++ M G + Y+
Sbjct: 448 AWCLFRSLTRK---GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 449 LLKGY 453
L+ +
Sbjct: 505 TLRDH 509
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 37/239 (15%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL--------------- 450
P V +T V++ + K D + +M +G+S + ++ IL+
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 451 --------------------KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
G+C+ + +A L+ M + P+VV YN +I+G
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLC 195
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
D AL F M +GI ++Y TL+ + SG+ A R+ +MV ++ ++
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK-RKIDPNV 254
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
I + L++ + + G P+V TY S NG + G+A +++
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 150 LYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAAD 209
L A ++ K M+R +P+V ++++++ G +A +F D V+
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-----------DLMVSKG 319
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
PD +N ++ S + ++LF EM G+V DA +YN ++ C+ + ++
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
V R+++ V + T + L+ + G ++ A ++V+ +++ D+
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV------------ 427
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
D + ++ + ++ L K P+ Y T++ G + G +
Sbjct: 428 ----DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 390 VRMLEAMRRQDDSASH-------PDHVSYTTVVSALVKA 421
++ M+ S DH YT++ + L+KA
Sbjct: 484 DKLCRRMKEDGFMPSERIYDETLRDH--YTSLSAELIKA 520
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 22/304 (7%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y L+ + ++G+ + +++ M R +A P +Y +++A +G A
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLR---AAIAPSRSTYNNLINACGSSGNWREA 100
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+V +MT GV + +T+NI+L Y Q KA E+ + A+++PD ++NI+I
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIY 159
Query: 488 GCILVDDSAGALSFFNEMRAR--GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ S+ AL FN MR + P +++T++M +++ G+ + VF+ MV +
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG- 218
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+K +++++N L+ Y G NG PDV +Y N +R+PG+A
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA- 277
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
KE + R KP+ + L D F +A+EI ME++G
Sbjct: 278 ------KEVFLMMRKERR--------KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 666 IPPN 669
I PN
Sbjct: 324 IKPN 327
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 50/403 (12%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRR--------------------------LR 199
P ++ ++ L+ G S +AL LF ++ + R
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 200 KITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLC 259
+ + VA +P+ ++NA++ A A G L + ++ Q G++PD +SY ++
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 260 CRKDR--KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL 317
R + K VF++ R E+ P + T ++L+ AY G L A V+ R+ +D
Sbjct: 269 GRSRQPGKAKEVFLMMR-KERRKP-NVVTYNALIDAYGSNGFLAEA---VEIFRQMEQD- 322
Query: 318 CRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLM 377
G K + V L + ++S + NT Y + +
Sbjct: 323 ------------GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 378 KGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRI 437
Y+ + + + + ++MR++ A D V++T ++S + A L EM +
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKA---DSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 438 GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG 497
+ + Y+ +L Y KQ Q+ +A + +M + A +PDV++Y ++ +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
A F EM A GI P I+ + LM+AF GQP + D M
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 9/221 (4%)
Query: 368 PNTRIYTTLMKGYMKSGR-VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+ + ++ Y KSGR S + E M+ + PD ++ ++ L K G +
Sbjct: 114 PDLVTHNIVLSAY-KSGRQYSKALSYFELMK---GAKVRPDTTTFNIIIYCLSKLGQSSQ 169
Query: 427 ARQVLAEM--TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
A + M R + +T+ ++ Y + +I+ R + M + ++P++VSYN
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNA 228
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
L+ + S ALS +++ GI P +SYT L+ ++ S QP A VF M+
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKE 287
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
R K +++ +N L++ Y G +G P+V
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 192/453 (42%), Gaps = 44/453 (9%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A SV+ + ++G +P V +++ +++ S +A +F + + RK
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK----------- 290
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ +NA+++A ++G +++F +M Q G+ P+ +S ++ C R +K + V
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L + + L +S + +Y++ +L+ A + Q+MR+K+
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV---------------- 394
Query: 332 KNDSV-FQKLLPNSMNQSXX-XXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
K DSV F L+ S S + + L P T +Y++++ Y K G+V++
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK--EVYSSVLCAYSKQGQVTEA 452
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ M+ + PD ++YT+++ A + +A ++ EM G+ + I + L
Sbjct: 453 ESIFNQMKM---AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
++ + K Q L+ M E EI + + C + + A+ M
Sbjct: 510 MRAFNKGGQPSNVFVLMDLMREK-EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY- 567
Query: 510 IAPTKISYTT-LMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
+ I T ++ F SG+ + ++F +++ V ++L + +L+E +G
Sbjct: 568 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG-VGINLKTYAILLEHLLAVGNWRK 626
Query: 569 XXXXXXXXXXNGFHP------DVGTYGSFANGI 595
G P D+ ++G + GI
Sbjct: 627 YIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI 659
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 161/389 (41%), Gaps = 31/389 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S + M++ G+ P + + ++V+ EA+ L D V
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL-----------VDQIVGLGYE 181
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ +N ++++ G L + M + G+ PD ++YN ++ + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++ + + T +L+ Y G L E ++ +++ S + I
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQL----------LEAKKQYNEMIQRSVNPNIVT 291
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
N + + ++++ L+ K + PN Y TL+ GY K+ RV D ++
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNV------LVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L M R D +Y T+ +AG A +VL M GV + T+NILL
Sbjct: 346 ILCVMSRD---GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G C +I KA L ++ + + +++YNI+I G D A F + +G++
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEM 540
P I+Y T+M + AH ++ +M
Sbjct: 462 PDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 178/440 (40%), Gaps = 40/440 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F+ +L A A + + LF + G+ D S+ ++ CR R L +
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 272 LERILEQNVPLCMTTLHSLVAAY----------------VDFG---DLDTAEIIVQAMRE 312
L ++++ + T SLV + V G ++ I+ ++ E
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 313 KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
K + + + + +G + D V L + S ++ +P+
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDD---SASHPDHVSYTTVVSALVKAGFMDRARQ 429
++ L+ Y K G+ +LEA ++ ++ + +P+ V+Y ++++ L G +D A++
Sbjct: 257 FSALIDVYGKEGQ------LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
VL + G N +TYN L+ GYCK ++D ++L M+ D + D +YN L G
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG-VDGDTFTYNTLYQGY 369
Query: 490 ILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
+ A M + G+ P ++ L+ G+ A +++ V V
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV-VG 428
Query: 550 LIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
+I +N++++G C+ G PDV TY + I L RK LW
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM--IGLRRKR-----LWR 481
Query: 610 EVKERWEAGRDRENSDSSVP 629
E E + R + D +P
Sbjct: 482 EAHELY---RKMQKEDGLMP 498
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 4/217 (1%)
Query: 400 DDSASHP--DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
D + SHP V ++ ++ A+ K + + + +G+S + ++ L+ +C+
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
++ A L +M + +P +V++ L++G V+ A+S +++ G P + Y
Sbjct: 129 RLSLALSCLGKMMK-LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
T++ + GQ A V M ++ D++ +N L+ G
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHM-KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 578 XNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G PDV T+ + + + EA +NE+ +R
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 138/306 (45%), Gaps = 20/306 (6%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+LFDEM + G+ D Y ++ CRK + + + E+ + T +L+
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
G++ AEI++ M+ K ++ ++ VF L+ +
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQV---------------VFNTLIDGYCRKGMVDEAS 419
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
+Y + K + + T+ + + R + + L R + VSYT +
Sbjct: 420 MIYDV-MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL---FRMMEGGVKLSTVSYTNL 475
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ K G ++ A+++ EM+ GV N ITYN+++ YCKQ +I +AR+L M +
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG- 534
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
+ PD +Y LI G + D+ A+ F+EM +G+ ++YT ++ + +G+ A
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 535 RVFDEM 540
++DEM
Sbjct: 595 GLYDEM 600
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 174/418 (41%), Gaps = 53/418 (12%)
Query: 229 DGKMF---LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
D MF L++FD M + G+ D S + + ++ R DL + + R+++ V + +
Sbjct: 166 DNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVY 225
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM 345
+L +V G+++ ++ +++ K G K ++ + N+
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVK----------------GIKPEAYTYNTIINAY 269
Query: 346 NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR-RQDDSAS 404
+ + N YT LM+ +K+G++SD ++ + MR R +S
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 405 H-------------------------------PDHVSYTTVVSALVKAGFMDRARQVLAE 433
H P +Y ++ + K G M A ++ E
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
M GV+ ++ +N L+ GYC++ +D+A ++ ++ E Q DV + N + +
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
A + M G+ + +SYT L+ + G + A R+F EM + V+ + I +
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM-SSKGVQPNAITY 507
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
N+++ YC+ G NG PD TY S +G +A EA+ L++E+
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 30/295 (10%)
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
Y+ +G + +R+ + M ++ S D S + A K +D ++ M GV
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSI---DERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGV 220
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
+ I+++G C++ +++K+++L++E + I+P+ +YN +I+ + D +G
Sbjct: 221 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG-IKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM-----VNDPRVKVDLIAWN 554
M+ G+ K++YT LM+ +G+ A ++FDEM +D V LI+WN
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 555 MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
CR G G P TYG+ +G+ + G A IL NE++ +
Sbjct: 340 ------CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 615 WEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+ + + +TL D R +A I ME+ G +
Sbjct: 394 ---------------GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 145/368 (39%), Gaps = 31/368 (8%)
Query: 154 SVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPD 213
V+K M + G + + ++ ++ +G +A LF + R D
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER-----------GIESD 328
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLE 273
+ ++++ G+ K LFDE+ + G+ P + +Y ++ C+ ++
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 274 RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKN 333
+ + V + ++L+ Y G +D A +I M +K G +
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK----------------GFQA 432
Query: 334 DSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML 393
D + + N+ + ++ +T YT L+ Y K G V + R+
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
M + P+ ++Y ++ A K G + AR++ A M G+ + TY L+ G
Sbjct: 493 VEMSSK---GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
C +D+A L EM + + V+Y ++I G S A ++EM+ +G
Sbjct: 550 CIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 514 KISYTTLM 521
YT L+
Sbjct: 609 NKVYTALI 616
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 180/438 (41%), Gaps = 47/438 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLF---------------RAVTR 196
AA V++ M + G +P+ ++ V+ +G EAL LF AV
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 197 RLRKITDP--------DVAADS-RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
L K + D+ ++ P+ +N +L C N G K ++F EM G P
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
D ++N ++ R + + + C+TT ++L+ A GD + E ++
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
M+ K G K L+ + + +
Sbjct: 550 SDMKSK----------------GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ + TL+ K ++ + R ++ PD V + +++S + D+A
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+L + G+S + +TYN L+ Y ++ + KA E+L+ + E ++++PD+VSYN +I
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL-EKSQLKPDLVSYNTVIK 709
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV-NDPRV 546
G A+ +EM RGI P +Y T + + G V + M ND R
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR- 768
Query: 547 KVDLIAWNMLVEGYCRLG 564
+ + + M+V+GYCR G
Sbjct: 769 -PNELTFKMVVDGYCRAG 785
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 162/388 (41%), Gaps = 57/388 (14%)
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
D A+ +L+A + +G + + LF+ M + G P ++YN+++ + + R
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS------W 262
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGK 332
+IL L + + + F + + ++ RE +LRE+
Sbjct: 263 RKIL--------GVLDEMRSKGLKFDEFTCSTVLSACAREG------LLREAKE------ 302
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
+ L Y P T Y L++ + K+G ++ + +
Sbjct: 303 ------------------------FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L+ M ++++ D V+Y +V+A V+AGF A V+ MT+ GV N ITY ++
Sbjct: 339 LKEM---EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
Y K + D+A +L M E A P+ +YN ++ S + +M++ G +P
Sbjct: 396 YGKAGKEDEALKLFYSMKE-AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+ ++ T++ G K +RVF EM + D +N L+ Y R G
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARK 600
GF+ V TY + N ALARK
Sbjct: 514 YGEMTRAGFNACVTTYNALLN--ALARK 539
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/534 (17%), Positives = 212/534 (39%), Gaps = 86/534 (16%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
GY P ++A++ +G EAL + L+++ + ADS +N ++
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSV-------LKEMEENSCPADSV----TYNELVA 359
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
A +G K + + M + GV+P+A++Y V+ + ++D + + + E
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG--- 416
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLP 342
C+ + A G + +++ + + + + C N + + +L
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC------------SPNRATWNTMLA 464
Query: 343 NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
N+ V++ + + P+ + TL+ Y + G D +M M R +
Sbjct: 465 LCGNKGMDKFVNRVFRE-MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ---LQI 459
A +Y +++AL + G V+++M G +Y+++L+ Y K L I
Sbjct: 524 ACV---TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 460 DKARELLRE-------------------------------MAEDAEIQPDVVSYNILIDG 488
++ ++E + + +PD+V +N ++
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 489 CI---LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ D + G L +R G++P ++Y +LM + G+ A + + + +
Sbjct: 641 FTRNNMYDQAEGIL---ESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL-KTLEKSQ 696
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+K DL+++N +++G+CR G G P + TY +F +G A+
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT-------AM 749
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
++ E+++ E + +P+E + D RA + +A++ V+
Sbjct: 750 GMFAEIEDVIECMAKND--------CRPNELTFKMVVDGYCRAGKYSEAMDFVS 795
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 150/367 (40%), Gaps = 53/367 (14%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
+ V + M G+ P ++ ++S G V+A ++ +TR A
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR-----------AGF 522
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+NA+LNA A GD + + +M G P SY+++++ C K L +
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ-CYAKGGNYLGIE 581
Query: 271 VLE-RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+E RI E + L +L+ A CR L S +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFK---------------------CRALAGSERAFT 620
Query: 330 -----GGKNDSV-FQKLLP----NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKG 379
G K D V F +L N+M + + L +P+ Y +LM
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL-----SPDLVTYNSLMDM 675
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
Y++ G +L+ + + S PD VSY TV+ + G M A ++L+EMT G+
Sbjct: 676 YVRRGECWKAEEILKTLEK---SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
TYN + GY + +++ MA++ + +P+ +++ +++DG + A+
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 500 SFFNEMR 506
F ++++
Sbjct: 792 DFVSKIK 798
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 18/265 (6%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ-IDKAREL 465
D +YTT++ A + G ++A + M +G S +TYN++L + K + K +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L EM ++ D + + ++ C A FF E+++ G P ++Y L++ F
Sbjct: 269 LDEMRSKG-LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+G A V EM + D + +N LV Y R G G P+
Sbjct: 328 KAGVYTEALSVLKEM-EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 586 GTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADIC 645
TY + + A K EAL L+ +K EAG VP +L L
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMK---EAG--------CVPNTCTYNAVLSLLG--- 432
Query: 646 VRAAFFRKALEIVACMEENGIPPNK 670
+ + + ++++ M+ NG PN+
Sbjct: 433 -KKSRSNEMIKMLCDMKSNGCSPNR 456
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
++ +M Y ++G++ D +++L M+R + P+ + T + V+A +++A + L
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQR---AGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 433 EMTRIGVSANRITYNILLKGYC-----------------------------------KQL 457
M +G+ N +TYN +++GYC K+
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+I + R+L+++MA++ + PD V+YN LI D + AL F + + +G K+ Y
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
+ ++ A G+ A + +EM++ D++ + +V G+CRLG
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 578 XNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERW 615
+G P+ +Y + NG+ K EA + N +E W
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 187/448 (41%), Gaps = 34/448 (7%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M R G +A+S V+ + +G +AL + + R A P+ N
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQR-----------AGVEPNLLICN 281
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++ + + L+ + M G+VP+ ++YN +++ C R + + +LE + +
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
L V+ Y G L + IV+ RDL + + + + G D V
Sbjct: 342 G------CLPDKVSYYTIMGYLCKEKRIVEV-----RDLMKKMAKEH----GLVPDQVTY 386
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L + + + + K + + Y+ ++ K GR+S+ ++ M
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML- 445
Query: 399 QDDSASH--PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ 456
S H PD V+YT VV+ + G +D+A+++L M G N ++Y LL G C+
Sbjct: 446 ---SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKIS 516
+ +ARE++ M+E+ P+ ++Y++++ G + A EM +G P +
Sbjct: 503 GKSLEAREMM-NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 561
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXX 576
L+++ G+ A + +E +N ++++ + ++ G+C+
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKG-CAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 577 XXNGFHPDVGTYGSFANGIALARKPGEA 604
H DV TY + + + + EA
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEA 648
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 160/381 (41%), Gaps = 27/381 (7%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ +N ++ + + ++L ++M G +PD +SY +M C++
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE--------- 360
Query: 272 LERILE-QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+RI+E +++ M H LV V + L I + + + L+++ + G
Sbjct: 361 -KRIVEVRDLMKKMAKEHGLVPDQVTYNTL----IHMLTKHDHADEALWFLKDAQEK--G 413
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT-PNTRIYTTLMKGYMKSGRVSDT 389
+ D + + +++ + +L K + P+ YT ++ G+ + G V
Sbjct: 414 FRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKA 473
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
++L+ M P+ VSYT +++ + + G AR+++ S N ITY+++
Sbjct: 474 KKLLQVMHTH---GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ G ++ ++ +A +++REM P V N+L+ + A F E +G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKG-FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEM--VNDPRVKVDLIAWNMLVEGYCRLGXXX 567
A +++TT++ F + + A V D+M +N D+ + LV+ + G
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK---HADVFTYTTLVDTLGKKGRIA 646
Query: 568 XXXXXXXXXXXNGFHPDVGTY 588
G P TY
Sbjct: 647 EATELMKKMLHKGIDPTPVTY 667
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 153/398 (38%), Gaps = 38/398 (9%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H A +K G+ +SA+V L G EA L + L K P
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL---INEMLSKGHCP--- 451
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
PD + AV+N G+ +L M G P+ +SY ++ CR +
Sbjct: 452 ----PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS-- 505
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE--KRRDLCRILRESN 325
LE + M+ H + T +I+ +R K + C ++RE
Sbjct: 506 --------LEAREMMNMSEEHWWSPNSI------TYSVIMHGLRREGKLSEACDVVREMV 551
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+ G V LL S+ + + L K N +TT++ G+ ++
Sbjct: 552 LK--GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + +L+ M + H D +YTT+V L K G + A +++ +M G+ +T
Sbjct: 610 LDAALSVLDDMYLIN---KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG-CILVDDSAGALSFFNE 504
Y ++ YC+ ++D +L +M + + YN +I+ C+L
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKV 723
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
+R + K Y LM+ + G P A++V M N
Sbjct: 724 LRTASRSDAKTCY-ALMEGYLKKGVPLSAYKVACRMFN 760
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/613 (21%), Positives = 229/613 (37%), Gaps = 109/613 (17%)
Query: 148 HTLYAASVVKSMLRSG---YLPHV-KAWSAVVSR---------------LASSGDSVEAL 188
T +A +V ML + P+V + SA+V R + GD+V
Sbjct: 178 QTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ 237
Query: 189 GLFRAVTRRLR-----KITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQF 243
L RA R + ++ + + PD+ ++ + AC + D M L EM +
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK 297
Query: 244 GV-VPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDT 302
+ VP +Y V+ ++ D + + + +L + + + SL+ + DL +
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 303 AEIIVQAMRE------------------KRRDLCRILRESNSEYIGGKNDSVF------Q 338
A ++ M + K ++ + L + G SVF Q
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L ++ ++ L N + T++ K G+ + +L M
Sbjct: 418 GWLKGQKHEEALKLFDESFETGL------ANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL-------- 450
+ P+ VSY V+ + MD AR V + + G+ N TY+IL+
Sbjct: 472 R---GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 451 ---------------------------KGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
G CK Q KARELL M E+ + +SYN
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+IDG + A++ + EM GI+P I+YT+LM + + A + DEM N
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
VK+D+ A+ L++G+C+ G +P Y S +G R G
Sbjct: 649 G-VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF---RNLGN 704
Query: 604 ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEE 663
+ + K+ + G L+ D G TL D ++ A E+ M+
Sbjct: 705 MVAALDLYKKMLKDG------------LRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 664 NGIPPNKTKFTRI 676
G+ P++ +T I
Sbjct: 753 VGLVPDEIIYTVI 765
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 210/506 (41%), Gaps = 93/506 (18%)
Query: 198 LRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP---------- 247
+ K+ D + ++ AFN +LNA + + + ++M + V+P
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 248 -------------------------DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
D ++ ++M+ R+++ + VL R +E+
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE- 265
Query: 283 CMTTLHSL-VAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI------GGKNDS 335
+ L+SL V A DL A +++ M+EK+ LC +E+ + I G +D+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKK--LCVPSQETYTSVILASVKQGNMDDA 323
Query: 336 VFQK--LLPN--SMN------------QSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKG 379
+ K +L + SMN ++ V + + +PN+ ++ L++
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 380 YMKSGRVSDTVRML-----------------------------EAMRRQDDS--ASHPDH 408
+ K+G + + EA++ D+S +
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 409 VSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLRE 468
T++S L K G D A ++L++M G+ N ++YN ++ G+C+Q +D AR +
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 469 MAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
+ E ++P+ +Y+ILIDGC D AL N M + I + Y T++ G
Sbjct: 504 ILEKG-LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 529 QPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
Q A + M+ + R+ V +++N +++G+ + G NG P+V TY
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 589 GSFANGIALARKPGEALILWNEVKER 614
S NG+ + +AL + +E+K +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNK 648
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 163/398 (40%), Gaps = 27/398 (6%)
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
N +L+ G +L +M G+ P+ +SYN VM CR+ DL V ILE
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLCRI----- 320
+ + T L+ D A +V M LC++
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 321 LRESNSEYIGGKNDSV----FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTL 376
RE + I K V + ++ + Y+ + +PN YT+L
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE-MCGNGISPNVITYTSL 625
Query: 377 MKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
M G K+ R+ + M + M+ + P +Y ++ K M+ A + +E+
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIP---AYGALIDGFCKRSNMESASALFSELLE 682
Query: 437 IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
G++ ++ YN L+ G+ + A +L ++M +D ++ D+ +Y LIDG + +
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLI 741
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
A + EM+A G+ P +I YT ++ + GQ ++F+EM + V +++ +N +
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-NVTPNVLIYNAV 800
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+ G+ R G G PD T+ +G
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 24/275 (8%)
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERI 275
++N++++ G+ + ++EM G+ P+ ++Y +M C+ +R D + + + +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 276 LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDS 335
+ V L + +L+ + ++++A + + E+ G N S
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-----------------GLNPS 688
Query: 336 --VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML 393
++ L+ N +Y+ +L + YTTL+ G +K G + +
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKK-MLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
M+ PD + YT +V+ L K G + ++ EM + V+ N + YN ++ G+
Sbjct: 748 TEMQA---VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
++ +D+A L EM D I PD +++IL+ G
Sbjct: 805 YREGNLDEAFRLHDEML-DKGILPDGATFDILVSG 838
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A+++ +L G P +++++S + G+ V AL L++ + + R
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD-----------GLR 721
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D G + +++ G+ + +L+ EM G+VPD + Y +++ +K + +V +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
E + + NV + ++++A + G+LD A
Sbjct: 782 FEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K PN Y ++ + SGR SD ++L R + +PD V+++ +++A VK
Sbjct: 39 KGIFPNVLTYNCMIDSFCHSGRWSDADQLL---RHMIEKQINPDIVTFSALINAFVKERK 95
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+ A ++ EM R + ITYN ++ G+CKQ ++D A+ +L MA PDVV+++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFS 154
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
LI+G + F EM RGI ++YTTL+ F G A + +EM++
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS- 213
Query: 544 PRVKVDLIAWNMLVEGYC 561
V D I ++ ++ G C
Sbjct: 214 CGVAPDYITFHCMLAGLC 231
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ K P+ ++ L+ ++K +VS+ + + M R + P ++Y +++ K
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRW---SIFPTTITYNSMIDGFCK 127
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+D A+++L M G S + +T++ L+ GYCK ++D E+ EM I + V
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG-IVANTV 186
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y LI G V D A NEM + G+AP I++ ++ + + A + +++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D V T +V L K G A+ + EM G+ N +TYN ++ +C + A +LL
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAL 526
R M E +I PD+V+++ LI+ + + A + EM I PT I+Y +++ F
Sbjct: 69 RHMIE-KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 527 SGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVG 586
+ A R+ D M + D++ ++ L+ GYC+ G +
Sbjct: 128 QDRVDDAKRMLDSMAS-KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 587 TYGSFANGIALARKPGEALILWNEV 611
TY + +G A L NE+
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 25/272 (9%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+ D A+++ G+ LF EM + G+ P+ L+YN ++ C R
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L ++E+ + + T +L+ A+V + AE I + M R + NS G
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML--RWSIFPTTITYNSMIDG 124
Query: 331 -GKNDSVFQ-KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
K D V K + +SM K +P+ ++TL+ GY K+ RV +
Sbjct: 125 FCKQDRVDDAKRMLDSM----------------ASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ + M R+ A + V+YTT++ + G +D A+ +L EM GV+ + IT++
Sbjct: 169 GMEIFCEMHRRGIVA---NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 449 LLKGYCKQLQIDKARELLREM--AEDAEIQPD 478
+L G C + ++ KA +L ++ +ED ++ +
Sbjct: 226 MLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 257
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 205/477 (42%), Gaps = 42/477 (8%)
Query: 157 KSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGA 216
K M+ SG +P + + +++ L +G +A GL R +R++ P+ +
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGL----VREMREM-------GPSPNCVS 193
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK-----DRKDLLVFV 271
+N ++ + + L LF+ M ++G+ P+ ++ NI++ C+K + K LL +
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ + N PL + L+ + G+ +VQA+ + +E + + +
Sbjct: 254 LDSS-QANAPLDIVICTILMDSCFKNGN------VVQAL--------EVWKEMSQKNVPA 298
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
DSV ++ + S + ++ + P+ Y TL+ K G+ +
Sbjct: 299 --DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M+ + PD +SY ++ L G ++RA + L M + + + +N+++
Sbjct: 357 LHGTMQ---NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY + A +L M ++P+V + N LI G + A NEMR+ I
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYG-VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P +Y L+ A G +LA +++DEM+ + D+I + LV G C G
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG-CQPDIITYTELVRGLCWKGRLKKAES 531
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSV 628
G D + A ++PGEA +++ ++W A R+R S S+
Sbjct: 532 LLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVY----KKWLATRNRGVSCPSI 584
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y I++++M+ G++ + + + M S P +++ +++ L KAG+++
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIY---SGVIPGLITHNHLLNGLCKAGYIE 173
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+A ++ EM +G S N ++YN L+KG C +DKA L M + I+P+ V+ NI+
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG-IRPNRVTCNII 232
Query: 486 I-----DGCILVDDSAGALSFFNEMRARGIAPTKISYTT-LMKAFALSGQPKLAHRVFDE 539
+ G I ++ + +A AP I T LM + +G A V+ E
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQAN--APLDIVICTILMDSCFKNGNVVQALEVWKE 290
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALAR 599
M + V D + +N+++ G C G G +PDV TY + + +
Sbjct: 291 M-SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 600 KPGEA 604
K EA
Sbjct: 350 KFDEA 354
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 186/429 (43%), Gaps = 72/429 (16%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +V K++ +G+ P + +++ +++ + + G ++ + + + ++
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQ----KQYGSISSIVSEVEQ-------SGTK 112
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK---LCCRKDR-KDL 267
D+ FNAV+NA + SG+ + +Q +M + G+ P +YN ++K + + +R +L
Sbjct: 113 LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
Query: 268 LVFVLERILEQNVPLC--MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESN 325
L +LE E NV + + T + LV A+ ++ A +V+ M E
Sbjct: 173 LDLMLE---EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE------------- 216
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXX--XXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
G + D+V + Q V + ++ + PN R ++ GY +
Sbjct: 217 ---CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCRE 273
Query: 384 GRVSDTVRMLEAMRRQDDSAS--------------------------------HPDHVSY 411
GRV D +R + M+ A+ D ++Y
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITY 333
Query: 412 TTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE 471
+TV++A AG+M++A QV EM + GV + Y+IL KGY + + KA ELL +
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI- 392
Query: 472 DAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPK 531
E +P+VV + +I G A+ FN+M G++P ++ TLM + QP
Sbjct: 393 -VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Query: 532 LAHRVFDEM 540
A V M
Sbjct: 452 KAEEVLQMM 460
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 43/344 (12%)
Query: 366 YTPNTRIYTTLMKGYM---KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG 422
+ P+ YTTL+ + G +S V +E S + D + + V++A ++G
Sbjct: 76 HRPSLISYTTLLAAMTVQKQYGSISSIVSEVE------QSGTKLDSIFFNAVINAFSESG 129
Query: 423 FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA--EIQPDVV 480
M+ A Q L +M +G++ TYN L+KGY + +++ ELL M E+ ++ P++
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH-RVFDE 539
++N+L+ A +M G+ P ++Y T+ + G+ A V ++
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG-IALA 598
MV + K + ++V GYCR G ++ + S NG + +
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 599 RKPG--EALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALE 656
+ G E L L E +K D T+ + A + KA +
Sbjct: 310 DRDGIDEVLTLMKECN------------------VKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 657 IVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVE 700
+ M + G+ P+ H+ +K RA++ ++ E
Sbjct: 352 VFKEMVKAGVKPD----------AHAYSILAKGYVRAKEPKKAE 385
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 29/301 (9%)
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
+ +++ LM Y K+G ++D++ + E +R P + T ++++LVK D +
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIR---SCGLKPHLQACTVLLNSLVKQRLTDTVWK 189
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
+ +M ++GV AN YN+L+ K +KA +LL EM E + PD+ +YN LI
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG-VFPDIFTYNTLISVY 248
Query: 490 ILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
ALS + M G+AP ++Y + + F+ G+ + A R+F E+ +D V +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD--VTAN 306
Query: 550 LIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
+ + L++GYCR+ GF P V TY S
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI------------------ 348
Query: 610 EVKERWEAGRDREN----SDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
+++ E GR RE ++ S ++PD +TL + + A+++ M E+G
Sbjct: 349 -LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 666 I 666
+
Sbjct: 408 L 408
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 173/412 (41%), Gaps = 36/412 (8%)
Query: 155 VVKSMLRS-GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPD 213
VV +RS G PH++A + +++ L L V + +K+ V A+
Sbjct: 154 VVFEQIRSCGLKPHLQACTVLLNSLVKQR-------LTDTVWKIFKKMVKLGVVAN---- 202
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLE 273
+N +++AC+ SGD + +L EM + GV PD +YN ++ + C+K + V +
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQD 262
Query: 274 RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-RDLCRILRESNSEYIGGK 332
R+ V + T +S + + RE R R+ R+ RE +
Sbjct: 263 RMERSGVAPNIVTYNSFIHGF---------------SREGRMREATRLFREIKDDVTA-- 305
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
N + L+ + + + + + ++P Y ++++ + GR+ + R+
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRL 364
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L M + PD+++ T+++A K M A +V +M G+ + +Y L+ G
Sbjct: 365 LTEMSGKK---IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
+CK L+++ A+E L M E P +Y+ L+DG + E RG+
Sbjct: 422 FCKVLELENAKEELFSMIEKG-FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
Y L++ Q A +F+ M V D + + + Y R G
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG-DSVIFTTMAYAYWRTG 531
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
N +Y L+ KSG ++L M ++ PD +Y T++S K
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEM---EEKGVFPDIFTYNTLISVYCKKSMHFE 256
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A V M R GV+ N +TYN + G+ ++ ++ +A L RE+ +D + + V+Y LI
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD--VTANHVTYTTLI 314
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM------ 540
DG ++D AL M +RG +P ++Y ++++ G+ + A+R+ EM
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 541 ---------VN-------------------DPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+N + +K+D+ ++ L+ G+C++
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
GF P TY +G K E L E ++R
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 195/455 (42%), Gaps = 38/455 (8%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD--LLVFVLER 274
+NA++ ACA + D + L L +M Q G D ++Y++V++ R ++ D +L+ + +
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
I + L + ++ ++ + GD A ++L + + + K
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKA--------------LQLLGMAQATGLSAKTA 305
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
++ + +++ S L P TR Y L+KGY+K+G + D M+
Sbjct: 306 TLVS--IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
M ++ S PD +Y+ ++ A V AG + AR VL EM V N ++ LL G+
Sbjct: 364 EMEKRGVS---PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 455 KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
+ + K ++L+EM + ++PD YN++ID + A++ F+ M + GI P +
Sbjct: 421 DRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXX 574
+++ TL+ G+ +A +F+ M + +N+++ Y
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC-ATTYNIMINSYGDQERWDDMKRLLG 538
Query: 575 XXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPD 634
G P+V T+ + + + + +A+ E+K LKP
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS---------------VGLKPS 583
Query: 635 EGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+ + L + + +A+ M +G+ P+
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 165/401 (41%), Gaps = 60/401 (14%)
Query: 173 AVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKM 232
+++S LA SG ++EA LF LR+ + +P T A+NA+L +G K
Sbjct: 309 SIISALADSGRTLEAEALFE----ELRQ-------SGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 233 FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVA 292
+ EM + GV PD +Y++++ R + VL+ + +V L+A
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 293 AYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXX 352
+ D G+ +++ M+ IG K D F ++ ++ +
Sbjct: 418 GFRDRGEWQKTFQVLKEMKS----------------IGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ------------- 399
+L + P+ + TL+ + K GR M EAM R+
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 400 ---------DD----------SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
DD P+ V++TT+V K+G + A + L EM +G+
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
+ YN L+ Y ++ ++A R M D ++P +++ N LI+ A A +
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG-LKPSLLALNSLINAFGEDRRDAEAFA 640
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
M+ G+ P ++YTTLMKA + + V++EM+
Sbjct: 641 VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 31/373 (8%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+V M + G P +S ++ ++G A R V + + A D +
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA----RIVLKEME-------AGDVQ 406
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P++ F+ +L + G+ + Q+ EM GV PD YN+V+ + + D +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+R+L + + T ++L+ + G AE + +AM + C
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC------------- 513
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ ++ NS + + PN +TTL+ Y KSGR +D +
Sbjct: 514 ---ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
LE M+ P Y +++A + G ++A MT G+ + + N L+
Sbjct: 571 CLEEMK---SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
+ + + +A +L+ M E+ ++PDVV+Y L+ I VD + EM G
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 512 PTKISYTTLMKAF 524
P + + + L A
Sbjct: 687 PDRKARSMLRSAL 699
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 23/317 (7%)
Query: 372 IYTTLMKGYMKSGRVSDTVRML-EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
+ +L+ +K RV D +++ E +R Q S D ++ ++ L G ++A ++
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQ----SCNDTKTFNILIRGLCGVGKAEKALEL 228
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
L M+ G + +TYN L++G+CK +++KA E+ +++ + PDVV+Y +I G
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
A S ++M GI PT +++ L+ +A +G+ A + +M++ D+
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP-DV 347
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+ + L++GYCR+G G P+ TY N + + +A L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 611 VKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 670
+ A +D + P + + + D +A +A IV ME+ P+K
Sbjct: 408 L-----ASKD----------IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 671 TKFTRIYVE--MHSRMF 685
FT + + M RMF
Sbjct: 453 ITFTILIIGHCMKGRMF 469
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
+P+ YT+++ GY K+G++ + +L+ M R +P +V++ +V KAG M
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRL---GIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A ++ +M G + +T+ L+ GYC+ Q+ + L EM + P+ +Y+ILI
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG-MFPNAFTYSILI 389
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+ + A ++ ++ I P Y ++ F +G+ A+ + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM-EKKKC 448
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
K D I + +L+ G+C G G PD T S + + A EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 607 LWNEVKERWEA 617
L N++ + ++
Sbjct: 509 L-NQIARKGQS 518
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 35/228 (15%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ------------- 456
+Y + +L KAG D A Q+ M GVS N L+ + ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 457 -----------------LQIDKARELLREMAEDAEIQP--DVVSYNILIDGCILVDDSAG 497
+++D+ + ++ E Q D ++NILI G V +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
AL M G P ++Y TL++ F S + A +F ++ + D++ + ++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
GYC+ G G +P T+ +G A K GE L
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA---KAGEML 329
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 23/317 (7%)
Query: 372 IYTTLMKGYMKSGRVSDTVRML-EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
+ +L+ +K RV D +++ E +R Q S D ++ ++ L G ++A ++
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQ----SCNDTKTFNILIRGLCGVGKAEKALEL 228
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
L M+ G + +TYN L++G+CK +++KA E+ +++ + PDVV+Y +I G
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
A S ++M GI PT +++ L+ +A +G+ A + +M++ D+
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP-DV 347
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+ + L++GYCR+G G P+ TY N + + +A L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 611 VKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 670
+ A +D + P + + + D +A +A IV ME+ P+K
Sbjct: 408 L-----ASKD----------IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 671 TKFTRIYVE--MHSRMF 685
FT + + M RMF
Sbjct: 453 ITFTILIIGHCMKGRMF 469
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
+P+ YT+++ GY K+G++ + +L+ M R +P +V++ +V KAG M
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRL---GIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A ++ +M G + +T+ L+ GYC+ Q+ + L EM + P+ +Y+ILI
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG-MFPNAFTYSILI 389
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+ + A ++ ++ I P Y ++ F +G+ A+ + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM-EKKKC 448
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
K D I + +L+ G+C G G PD T S + + A EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 607 LWNEVKERWEA 617
L N++ + ++
Sbjct: 509 L-NQIARKGQS 518
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 35/228 (15%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ------------- 456
+Y + +L KAG D A Q+ M GVS N L+ + ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 457 -----------------LQIDKARELLREMAEDAEIQP--DVVSYNILIDGCILVDDSAG 497
+++D+ + ++ E Q D ++NILI G V +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
AL M G P ++Y TL++ F S + A +F ++ + D++ + ++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
GYC+ G G +P T+ +G A K GE L
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA---KAGEML 329
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 20/302 (6%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P M + GRV +R MRR S P+ + V+S ++G +D
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS---PNPYTLNMVMSGYCRSGKLD 255
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+ ++L +M R+G A ++YN L+ G+C++ + A +L + M + +QP+VV++N L
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFNTL 314
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G A F EM+A +AP ++Y TL+ ++ G ++A R +++MV +
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG- 373
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
++ D++ +N L+ G C+ P+ T+ + G + +
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
L+ K +G P+E + L R F A +++ M
Sbjct: 434 ELY---KSMIRSG------------CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 666 IP 667
IP
Sbjct: 479 IP 480
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 131/309 (42%), Gaps = 26/309 (8%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
R++ +L K + + + M+ D P S +S+L+ G +D A +
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMK---DYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM R +S N T N+++ GYC+ ++DK ELL++M E + VSYN LI G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAGHC 284
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM--VNDPRVKV 548
+ AL N M G+ P +++ TL+ F + + + A +VF EM VN V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN---VAP 341
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
+ + +N L+ GY + G NG D+ TY + G+ K +A
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTL-ADICVRAAFFRKALEIVACMEENGIP 667
E+ D+EN L P+ L CVR R E+ M +G
Sbjct: 402 KEL--------DKEN-------LVPNSSTFSALIMGQCVRKNADR-GFELYKSMIRSGCH 445
Query: 668 PNKTKFTRI 676
PN+ F +
Sbjct: 446 PNEQTFNML 454
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 139/330 (42%), Gaps = 55/330 (16%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P + NA +++ G + L+ + EM + + P+ + N+VM CR + D + +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ + + ++L+A + + G L +A L+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSA-----------------LK--------- 294
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
L N M +S PN + TL+ G+ ++ ++ + +
Sbjct: 295 ---------LKNMMGKSGLQ----------------PNVVTFNTLIHGFCRAMKLQEASK 329
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M+ + + P+ V+Y T+++ + G + A + +M G+ + +TYN L+
Sbjct: 330 VFGEMKAVNVA---PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CKQ + KA + ++E+ ++ + P+ +++ LI G + ++ + M G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKE-NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
P + ++ L+ AF + A +V EMV
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 20/302 (6%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P M + GRV +R MRR S P+ + V+S ++G +D
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS---PNPYTLNMVMSGYCRSGKLD 255
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+ ++L +M R+G A ++YN L+ G+C++ + A +L + M + +QP+VV++N L
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFNTL 314
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G A F EM+A +AP ++Y TL+ ++ G ++A R +++MV +
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG- 373
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
++ D++ +N L+ G C+ P+ T+ + G + +
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
L+ K +G P+E + L R F A +++ M
Sbjct: 434 ELY---KSMIRSG------------CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 666 IP 667
IP
Sbjct: 479 IP 480
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 131/309 (42%), Gaps = 26/309 (8%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
R++ +L K + + + M+ D P S +S+L+ G +D A +
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMK---DYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM R +S N T N+++ GYC+ ++DK ELL++M E + VSYN LI G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAGHC 284
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM--VNDPRVKV 548
+ AL N M G+ P +++ TL+ F + + + A +VF EM VN V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN---VAP 341
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
+ + +N L+ GY + G NG D+ TY + G+ K +A
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTL-ADICVRAAFFRKALEIVACMEENGIP 667
E+ D+EN L P+ L CVR R E+ M +G
Sbjct: 402 KEL--------DKEN-------LVPNSSTFSALIMGQCVRKNADR-GFELYKSMIRSGCH 445
Query: 668 PNKTKFTRI 676
PN+ F +
Sbjct: 446 PNEQTFNML 454
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 139/330 (42%), Gaps = 55/330 (16%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P + NA +++ G + L+ + EM + + P+ + N+VM CR + D + +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ + + ++L+A + + G L +A L+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSA-----------------LK--------- 294
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
L N M +S PN + TL+ G+ ++ ++ + +
Sbjct: 295 ---------LKNMMGKSGLQ----------------PNVVTFNTLIHGFCRAMKLQEASK 329
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M+ + + P+ V+Y T+++ + G + A + +M G+ + +TYN L+
Sbjct: 330 VFGEMKAVNVA---PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G CKQ + KA + ++E+ ++ + P+ +++ LI G + ++ + M G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKE-NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
P + ++ L+ AF + A +V EMV
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 180/436 (41%), Gaps = 32/436 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A+ V K ML G P+V ++ ++ L G EA G++ + +R
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-----------GME 423
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P ++++++ G+ + L+++M + G PD + Y +++ ++ L++
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD---GLSKQGLMLHA 480
Query: 272 LE---RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ ++L Q++ L + +SL+ + D A + + M ++ + +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG------IKPDVATF 534
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
S+ + M + + Q + + + ++ K R+ D
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR----NKISADIAVCNVVIHLLFKCHRIED 590
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ + + PD V+Y T++ +D A ++ + N +T I
Sbjct: 591 ASKFFNNLI---EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
L+ CK +D A + MAE +P+ V+Y L+D D G+ F EM+ +
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
GI+P+ +SY+ ++ G+ A +F + + D ++ D++A+ +L+ GYC++G
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVE 765
Query: 569 XXXXXXXXXXNGFHPD 584
NG PD
Sbjct: 766 AALLYEHMLRNGVKPD 781
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/546 (20%), Positives = 201/546 (36%), Gaps = 103/546 (18%)
Query: 159 MLRSGYLPH-VKAWSAVVSRLASSGDSVEALGLFRAVTRR------------LRKITDPD 205
+ R G P V A V+ L G+ +AL R V R L+ ++
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ 266
Query: 206 VAADSR-----------PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNI 254
+ SR P+ F ++N G+ LF M Q G+ PD ++Y+
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 255 VMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR 314
++ + + + + L + V L + S + YV GDL TA ++ + M
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM---- 382
Query: 315 RDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYT 374
L + +PN YT
Sbjct: 383 -----------------------------------------------LCQGISPNVVTYT 395
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
L+KG + GR+ + M + ++ P V+Y++++ K G + + +M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKR---GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 435 TRIGVSANRITYNILLKGYCKQ-LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
++G + + Y +L+ G KQ L + R ++ + + I+ +VV +N LIDG ++
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ--SIRLNVVVFNSLIDGWCRLN 510
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMK------AFALSGQPKLAHRVFDEMVNDPRVK 547
AL F M GI P ++TT+M+ AF +P + ++FD M + ++
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN-KIS 569
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D+ N+++ + PD+ TY + G R+ EA +
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 608 WNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
+ +K V P P+ L L + + A+ + + M E G
Sbjct: 630 FELLK---------------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 668 PNKTKF 673
PN +
Sbjct: 675 PNAVTY 680
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/528 (18%), Positives = 206/528 (39%), Gaps = 92/528 (17%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS- 210
A+ ++ +L G P+V + +++ G+ A LF+ + +R +PD+ A S
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG---IEPDLIAYST 326
Query: 211 --------------------------RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFG 244
+ D F++ ++ SGD ++ M G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 245 VVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAE 304
+ P+ ++Y I++K C+ R + +IL++ + + T SL+ + G+L +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 305 IIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPK 364
+ + M + +G D V +L + +++ + +L +
Sbjct: 447 ALYEDMIK----------------MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS-ALVKAGF 423
N ++ +L+ G+ + R + L+ R PD ++TTV+ ++++ F
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEA---LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 424 MDRAR-----QVLAEMTRIGVSA-----------------------------------NR 443
+ Q+ M R +SA +
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
+TYN ++ GYC ++D+A + E+ + P+ V+ ILI +D GA+ F+
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRL 563
M +G P ++Y LM F+ S + + ++F+EM + + +++++++++G C+
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKR 725
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
G PDV Y G + EA +L+ +
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 19/277 (6%)
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
D P+ V++ T+++ K G MDRA + M + G+ + I Y+ L+ GY K +
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 461 KARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
+L + A ++ DVV ++ ID + D A A + M +GI+P ++YT L
Sbjct: 339 MGHKLFSQ-ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+K G+ A ++ +++ ++ ++ ++ L++G+C+ G G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRG-MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 581 FHPDVGTYGSFANGIALARKPGEAL-ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLD 639
+ PDV YG +G++ K G L + VK ++ ++ + + +
Sbjct: 457 YPPDVVIYGVLVDGLS---KQGLMLHAMRFSVKMLGQS-------------IRLNVVVFN 500
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
+L D R F +AL++ M GI P+ FT +
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/451 (19%), Positives = 190/451 (42%), Gaps = 36/451 (7%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
YA ++K M++ G++P ++ ++ + DS+ L + ++ V +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC-DLLDLAEKAYSEMLAAGVVLN- 447
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+ + +F L ++G + + EM G +PD +Y+ V+ C + +L
Sbjct: 448 KINVSSFTRCL---CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ E + + + T +V ++ G ++ A MRE +G
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE----------------VG 548
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+ V L ++ ++ +L + PN Y+ L+ G+ K+G+V
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 391 RMLEAM-------------RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRI 437
++ E M ++ DD++ P+ V+Y ++ K+ ++ AR++L M+
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 438 GVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG 497
G N+I Y+ L+ G CK ++D+A+E+ EM+E + +Y+ LID V
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDL 727
Query: 498 ALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
A ++M AP + YT ++ G+ A+++ +M+ + + +++ + ++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMI 786
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
+G+ +G G P+ TY
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 182/466 (39%), Gaps = 65/466 (13%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA--- 207
YA + ++ML G LP++ +SA++ +G +A +F + + + D D+
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS-KDVPDVDMYFKQ 629
Query: 208 ---ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDR 264
RP+ + A+L+ S + +L D M G P+ + Y+ ++ C+ +
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 265 KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES 324
D V + E P + T SL+ Y + KR+DL
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRY---------------FKVKRQDLA------ 728
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
V K+L NS PN IYT ++ G K G
Sbjct: 729 ---------SKVLSKMLENSC---------------------APNVVIYTEMIDGLCKVG 758
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
+ + ++++ M ++ P+ V+YT ++ G ++ ++L M GV+ N +
Sbjct: 759 KTDEAYKLMQMM---EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
TY +L+ CK +D A LL EM + Y +I+G + +L +E
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQ-THWPTHTAGYRKVIEG--FNKEFIESLGLLDE 872
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA-WNMLVEGYCRL 563
+ AP Y L+ + + ++A R+ +E+ VD + +N L+E C
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
G P++ ++ S G+ K EAL+L +
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 181/447 (40%), Gaps = 50/447 (11%)
Query: 197 RLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVM 256
R +++ + + P FN++++A SGD +L +M + G +P + YNI++
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 257 -KLCCRKDR-----KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
+C KD DL +L V L + S G + A +++ M
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 311 --------------------REKRRDLCRILRESNSEYIGGKNDSVFQ-KLLPNSMNQSX 349
+ +L +L E GG V+ ++ +S ++
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR--GGLVADVYTYTIMVDSFCKAG 532
Query: 350 XXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHV 409
+ + TPN YT L+ Y+K+ +VS + E M + P+ V
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIV 589
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRI----------------GVSANRITYNILLKGY 453
+Y+ ++ KAG +++A Q+ M N +TY LL G+
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
CK ++++AR+LL M+ + +P+ + Y+ LIDG V A EM G T
Sbjct: 650 CKSHRVEEARKLLDAMSMEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
+Y++L+ + + LA +V +M+ + +++ + +++G C++G
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 574 XXXXXNGFHPDVGTYGSFANGIALARK 600
G P+V TY + +G + K
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 121/320 (37%), Gaps = 67/320 (20%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P+T YT L+ G ++ + + L MR ++ P+ V+Y+T++ + +
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA---TSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
R ++VL M G + +N L+ YC A +LL++M + + P V YNIL
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNIL 413
Query: 486 IDG---------CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
I C L+D + A ++EM A G+ KI+ ++ + +G+ + A V
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKA---YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 537 FDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
EM+ GF PD TY N +
Sbjct: 471 IREMIG------------------------------------QGFIPDTSTYSKVLNYLC 494
Query: 597 LARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALE 656
A K A +L+ E+K L D + D +A +A +
Sbjct: 495 NASKMELAFLLFEEMKR---------------GGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 657 IVACMEENGIPPNKTKFTRI 676
M E G PN +T +
Sbjct: 540 WFNEMREVGCTPNVVTYTAL 559
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 11/175 (6%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
LE + R D P +Y ++ A +KA +D A + EM+ + + T
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
CK + K RE L + E PD V Y LI G A+ F N MRA P
Sbjct: 280 LCK---VGKWREALT-LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVND---PRVKVDLIAWNMLVEGYCRLG 564
++Y+TL+ Q RV + M+ + P K+ +N LV YC G
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI----FNSLVHAYCTSG 386
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 28/305 (9%)
Query: 240 MPQFGVVPDALSYNIVMK-LCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFG 298
M + G PD +++ +M LCC L V + E + P +++ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY-----GTIINGLCKMG 55
Query: 299 DLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQ 358
D ++A ++ M E ++ +++ +L + + ++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIY-----------NAIIDRLCKDGHHIHAQNLFTEMHD 104
Query: 359 PPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM-RRQDDSASHPDHVSYTTVVSA 417
+ P T Y+ ++ + +SGR +D ++L M RQ +PD V+++ +++A
Sbjct: 105 KGIFPDVIT-----YSGMIDSFCRSGRWTDAEQLLRDMIERQ----INPDVVTFSALINA 155
Query: 418 LVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQP 477
LVK G + A ++ +M R G+ ITYN ++ G+CKQ +++ A+ +L MA + P
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS-CSP 214
Query: 478 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVF 537
DVV+++ LI+G + F EM RGI ++YTTL+ F G A +
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 538 DEMVN 542
+ M++
Sbjct: 275 NVMIS 279
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 146/328 (44%), Gaps = 35/328 (10%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
M+ +G P V ++ +++ L G ++AL L V R + + P +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALAL---VDRMVEEGHQP------------YG 45
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++N GD + L L +M + + + YN ++ C+ + + ++
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
+ + T ++ ++ G AE +++ M E R+ N + + F
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE---------RQINPDVV------TFS 150
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L+ + + +Y +L + P T Y +++ G+ K R++D RML++M
Sbjct: 151 ALINALVKEGKVSEAEEIY-GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+ S PD V+++T+++ KA +D ++ EM R G+ AN +TY L+ G+C+
Sbjct: 210 KSCS---PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILI 486
+D A++LL M + P+ +++ ++
Sbjct: 267 LDAAQDLLNVMISSG-VAPNYITFQSML 293
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ +TTLM G GRV + +++ M + H Y T+++ L K G + A
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG-------HQPYGTIINGLCKMGDTESA 60
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+L++M + A+ + YN ++ CK A+ L EM D I PDV++Y+ +ID
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMID 119
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
A +M R I P ++++ L+ A G+ A ++ +M+ +
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG-IF 178
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
I +N +++G+C+ PDV T+ + NG A++ + +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 608 WNEVKER 614
+ E+ R
Sbjct: 239 FCEMHRR 245
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 150 LYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAAD 209
L A ++V M+ G+ P + +++ L GD+ AL L L K+ + + A
Sbjct: 27 LQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL-------LSKMEETHIKAH 75
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
+NA+++ G LF EM G+ PD ++Y+ ++ CR R
Sbjct: 76 ----VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+L ++E+ + + T +L+ A V G + AE I M RR + NS
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML--RRGIFPTTITYNSMID 189
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G F K + +N + + K +P+ ++TL+ GY K+ RV +
Sbjct: 190 G------FCK--QDRLNDAKRML------DSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ + M R+ A + V+YTT++ + G +D A+ +L M GV+ N IT+ +
Sbjct: 236 MEIFCEMHRRGIVA---NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 450 LKGYCKQLQIDKARELLREM 469
L C + ++ KA +L ++
Sbjct: 293 LASLCSKKELRKAFAILEDL 312
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 67/290 (23%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
H ++A ++ M G P V +S ++ SG +A L R + R
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER---------- 140
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
PD F+A++NA G +++ +M + G+ P ++YN ++ C++DR +
Sbjct: 141 -QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA-EIIVQAMREKRRDLCRILRESNS 326
+L+ + ++ + T +L+ Y +D EI + R
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR--------------- 244
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
+ NT YTTL+ G+ + G +
Sbjct: 245 -------------------------------------RGIVANTVTYTTLIHGFCQVGDL 267
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
+L M S P+++++ +++++L + +A +L ++ +
Sbjct: 268 DAAQDLLNVMIS---SGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 163/412 (39%), Gaps = 56/412 (13%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F +L A AN + + +M +G+ D S+ I++ CR R + V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + T SL+ + + A +V M + G
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS----------------GY 172
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + V L + + ++ + K + Y TL+ G SGR SD R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN---- 447
ML M ++ + +PD V++T ++ VK G +D A+++ EM + V N +TYN
Sbjct: 233 MLRDMMKR---SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 448 -------------------------------ILLKGYCKQLQIDKARELLREMAEDAEIQ 476
L+ G+CK +D+ +L + M+ +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG-FN 348
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
D+ +YN LI G V AL F M +R + P I++ L+ ++G+ + A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 537 FDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
FD+M + + ++A+N+++ G C+ G PD TY
Sbjct: 409 FDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ Y P+ + +L+ G+ R+ D ++ M + S P+ V Y T++ L K
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK---SGYEPNVVVYNTLIDGLCK 188
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G ++ A ++L EM + G+ A+ +TYN LL G C + A +LR+M + + I PDVV
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS-INPDVV 247
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++ LID + + A + EM + P ++Y +++ + G+ A + FD M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
+ +++ +N L+ G+C+ GF+ D+ TY + +G K
Sbjct: 308 ASKGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 601 PGEALILW 608
AL ++
Sbjct: 367 LRVALDIF 374
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/414 (19%), Positives = 171/414 (41%), Gaps = 67/414 (16%)
Query: 151 YAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
+A SV+ M++ GY P + + +++ +A L + V +
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-----------VKSGY 172
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
P+ +N +++ +G+ + L+L +EM + G+ D ++YN ++ C R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L ++++++ + T +L+ +V G+LD A+ + + M + D
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD-------------- 278
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
PN Y +++ G GR+ D
Sbjct: 279 -------------------------------------PNNVTYNSIINGLCMHGRLYDAK 301
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ + M + P+ V+Y T++S K +D ++ M+ G +A+ TYN L+
Sbjct: 302 KTFDLMASK---GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
GYC+ ++ A ++ M + PD++++ IL+ G + + AL F++MR
Sbjct: 359 HGYCQVGKLRVALDIFCWMVS-RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
++Y ++ + + + A +F + + VK D + +++ G C+ G
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG-VKPDARTYTIMILGLCKNG 470
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+T L+ + + R+S + +L M + P V++ +++ + A ++
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKL---GYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M + G N + YN L+ G CK +++ A ELL EM E + DVV+YN L+ G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYS 224
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
+ A +M R I P +++T L+ F G A ++ EM+ V + +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS-VDPNNVT 283
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
+N ++ G C G G P+V TY + +G R E + L+
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 404 SHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAR 463
SH D S+T ++ + + A VL +M ++G + +T+ LL G+C +I A
Sbjct: 103 SH-DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 464 ELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA 523
L+ M + +P+VV YN LIDG + AL NEM +G+ ++Y TL+
Sbjct: 162 SLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 524 FALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHP 583
SG+ A R+ +M+ + D++ + L++ + + G + P
Sbjct: 221 LCYSGRWSDAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 584 DVGTYGSFANGIAL 597
+ TY S NG+ +
Sbjct: 280 NNVTYNSIINGLCM 293
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 5/236 (2%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT 435
L G++ S R D + M S P V +T +++A + +M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVH---SQPLPSIVDFTRLLTATANLRRYETVIYFSQKME 98
Query: 436 RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDS 495
G+S + ++ IL+ +C+ ++ A +L +M + +P +V++ L+ G LV+
Sbjct: 99 LYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRI 157
Query: 496 AGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNM 555
A S M G P + Y TL+ +G+ +A + +EM + D++ +N
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNT 216
Query: 556 LVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
L+ G C G +PDV T+ + + EA L+ E+
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
I D+ S+ ILI + ALS +M G P+ +++ +L+ F L + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+ MV + +++ +N L++G C+ G G DV TY + G
Sbjct: 162 SLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
+ + + +A + ++ +R + PD L D+ V+ +A
Sbjct: 221 LCYSGRWSDAARMLRDMMKR---------------SINPDVVTFTALIDVFVKQGNLDEA 265
Query: 655 LEIVACMEENGIPPNKTKFTRIY--VEMHSRMFTSK 688
E+ M ++ + PN + I + MH R++ +K
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 19/281 (6%)
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+S+ R+L M ++ PD V+ V +L + G +D A+ ++ E+T + T
Sbjct: 140 ISNVHRVLNLMV---NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YN LLK CK + E + EM +D +++PD+VS+ ILID + A+ +++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G P Y T+MK F + A V+ +M + V+ D I +N L+ G + G
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM-KEEGVEPDQITYNTLIFGLSKAGR 315
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSD 625
G+ PD TY S NG+ + AL L E++ R A
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA-------- 367
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
P++ +TL +A K +E+ M+ +G+
Sbjct: 368 -------PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 22/348 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKM--FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
RP F +L+ + D + ++ + M G+ PD ++ +I ++ C R D
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+++ + E++ P T + L+ DL V MR+
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD--------------- 223
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
K D V +L +++ S L + P+ +Y T+MKG+ + S+
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
V + + M+ + PD ++Y T++ L KAG ++ AR L M G + TY
Sbjct: 284 AVGVYKKMKEE---GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
L+ G C++ + A LL EM E P+ +YN L+ G + + M++
Sbjct: 341 LMNGMCRKGESLGALSLLEEM-EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
G+ Y TL+++ SG+ A+ VFD V D + D A++ L
Sbjct: 400 GVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV-DSKSLSDASAYSTL 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 107/277 (38%), Gaps = 55/277 (19%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
D +PD +F +++ NS + + + L ++ G PD YN +MK C +
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
V V +++ E+ V T ++L+ G ++ A + ++ M +
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG-------------- 330
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
Y+P +T YT+LM G + G
Sbjct: 331 ----------------------------YEP---------DTATYTSLMNGMCRKGESLG 353
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ +LE M + P+ +Y T++ L KA MD+ ++ M GV Y
Sbjct: 354 ALSLLEEMEAR---GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
L++ K ++ +A E+ + A D++ D +Y+ L
Sbjct: 411 LVRSLVKSGKVAEAYEVF-DYAVDSKSLSDASAYSTL 446
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 164/383 (42%), Gaps = 28/383 (7%)
Query: 236 LFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYV 295
L +M G +PD ++N+ + L CR+++ V ++++ + + L+
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 296 DFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXX 355
G + A I AM +R S ++ L+ +
Sbjct: 161 RAGKVTDAVEIWNAM----------IRSGVS-----PDNKACAALVVGLCHARKVDLAYE 205
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+ + +T +Y L+ G+ K+GR+ + M + PD V+Y ++
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK---IGCEPDLVTYNVLL 262
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+ + RA V+AEM R G+ + +YN LLK +C+ DK + + E+
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK-----EM 317
Query: 476 QP----DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPK 531
+P DVVSY+ LI+ ++ A F EMR +G+ ++YT+L+KAF G
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 532 LAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSF 591
+A ++ D+M + + D I + +++ C+ G + PD +Y S
Sbjct: 378 VAKKLLDQM-TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 592 ANGIALARKPGEALILWNEVKER 614
+G+ + + EA+ L+ ++K +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGK 459
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 186/422 (44%), Gaps = 38/422 (9%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G++P + A++ + L A+ F + +R R+ PD ++ ++N
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGRE-----------PDVVSYTILIN 157
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV-FVLERILEQNVP 281
+G +++++ M + GV PD + ++ C + DL V E I V
Sbjct: 158 GLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVK 217
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD--------LCRILRESN-------- 325
L ++L++ + G ++ AE + M + + L ++N
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 326 -SEYI--GGKNDSV-FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYM 381
+E + G + D+ + +LL S + P+ + + Y+TL++ +
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFC 336
Query: 382 KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
++ R+ E MR++ + V+YT+++ A ++ G A+++L +MT +G+S
Sbjct: 337 RASNTRKAYRLFEEMRQK---GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Query: 442 NRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
+RI Y +L CK +DKA + +M E EI PD +SYN LI G A+
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEH-EITPDAISYNSLISGLCRSGRVTEAIKL 452
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
F +M+ + P ++++ ++ + A++V+D+M+ D +D + L++ C
Sbjct: 453 FEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM-DKGFTLDRDVSDTLIKASC 511
Query: 562 RL 563
+
Sbjct: 512 SM 513
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
+Y+ +S L K D +L++M +G + +N+ L C++ ++ A + M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
+ +PDVVSY ILI+G A+ +N M G++P + L+ + +
Sbjct: 141 VQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 530 PKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYG 589
LA+ + E + RVK+ + +N L+ G+C+ G G PD+ TY
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 590 SFAN 593
N
Sbjct: 260 VLLN 263
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 188/459 (40%), Gaps = 76/459 (16%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+L M +G+ PD +++ + + C+ VL ++ + ++ S++ +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
G + A ++ + R + N V+ L N +
Sbjct: 352 CKVGKPEEAIKLIHSFRLR------------------PNIFVYSSFLSNICSTGDMLRAS 393
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
++Q + P+ YTT++ GY GR + A+ + S + P + T +
Sbjct: 394 TIFQE-IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK---SGNPPSLTTSTIL 449
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ A + G + A V M G+ + +TYN L+ GY K Q++K EL+ EM A
Sbjct: 450 IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM-RSAG 508
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
I PDV +YNILI ++ A +E+ RG P+ +++T ++ F+ G + A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
++ M D R+K D++ + L+ GYC+
Sbjct: 569 ILWFYMA-DLRMKPDVVTCSALLHGYCK-------------------------------- 595
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
A++ +A++L+N++ +AG LKPD L +TL KA
Sbjct: 596 ---AQRMEKAIVLFNKL---LDAG------------LKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 655 LEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSK--HAS 691
E++ M + G+ PN++ + + + + F + HAS
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHAS 676
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 55/332 (16%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
RP+ +++ L+ ++GD +F E+ + G++PD + Y ++ C R D
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L+ P +TT L+ A FG + AE + + M+ + G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE----------------G 473
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K D V Y LM GY K+ +++
Sbjct: 474 LKLDVV-----------------------------------TYNNLMHGYGKTHQLNKVF 498
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+++ MR S PD +Y ++ ++V G++D A ++++E+ R G + + + ++
Sbjct: 499 ELIDEMRSAGIS---PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G+ K+ +A L MA D ++PDVV+ + L+ G A+ FN++ G+
Sbjct: 556 GGFSKRGDFQEAFILWFYMA-DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
P + Y TL+ + G + A + MV
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 29/323 (8%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
+ +L + N + + ++ Y G +L M+ PD V++T +
Sbjct: 258 FVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY---GIRPDIVAFTVFID 314
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
L KAGF+ A VL ++ G+S + ++ + ++ G+CK + ++A +L+ ++
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF----RLR 370
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
P++ Y+ + D A + F E+ G+ P + YTT++ + G+ A +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 537 FDEMV---NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
F ++ N P + I L+ R G G DV TY + +
Sbjct: 431 FGALLKSGNPPSLTTSTI----LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 594 GIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRK 653
G + + L +E++ AG + PD + L V + +
Sbjct: 487 GYGKTHQLNKVFELIDEMR---SAG------------ISPDVATYNILIHSMVVRGYIDE 531
Query: 654 ALEIVACMEENGIPPNKTKFTRI 676
A EI++ + G P+ FT +
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDV 554
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L+ + D P +++ +++ ++ AR+ + M G N ++ ++
Sbjct: 221 LKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRK 280
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
YC DK ELL M I+PD+V++ + ID A S +++ GI+
Sbjct: 281 YCSDGYFDKGWELLMGMKHYG-IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+S ++++ F G+P+ A + +++ R++ ++ ++ + C G
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI 395
Query: 573 XXXXXXNGFHPDVGTYGSFANG 594
G PD Y + +G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDG 417
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 188/459 (40%), Gaps = 76/459 (16%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+L M +G+ PD +++ + + C+ VL ++ + ++ S++ +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
G + A ++ + R + N V+ L N +
Sbjct: 352 CKVGKPEEAIKLIHSFRLR------------------PNIFVYSSFLSNICSTGDMLRAS 393
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
++Q + P+ YTT++ GY GR + A+ + S + P + T +
Sbjct: 394 TIFQE-IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK---SGNPPSLTTSTIL 449
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ A + G + A V M G+ + +TYN L+ GY K Q++K EL+ EM A
Sbjct: 450 IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM-RSAG 508
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
I PDV +YNILI ++ A +E+ RG P+ +++T ++ F+ G + A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
++ M D R+K D++ + L+ GYC+
Sbjct: 569 ILWFYMA-DLRMKPDVVTCSALLHGYCK-------------------------------- 595
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
A++ +A++L+N++ +AG LKPD L +TL KA
Sbjct: 596 ---AQRMEKAIVLFNKL---LDAG------------LKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 655 LEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSK--HAS 691
E++ M + G+ PN++ + + + + F + HAS
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHAS 676
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 55/332 (16%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
RP+ +++ L+ ++GD +F E+ + G++PD + Y ++ C R D
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L+ P +TT L+ A FG + AE + + M+ + G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE----------------G 473
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K D V Y LM GY K+ +++
Sbjct: 474 LKLDVV-----------------------------------TYNNLMHGYGKTHQLNKVF 498
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+++ MR S PD +Y ++ ++V G++D A ++++E+ R G + + + ++
Sbjct: 499 ELIDEMRSAGIS---PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G+ K+ +A L MA D ++PDVV+ + L+ G A+ FN++ G+
Sbjct: 556 GGFSKRGDFQEAFILWFYMA-DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
P + Y TL+ + G + A + MV
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 29/323 (8%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
+ +L + N + + ++ Y G +L M+ PD V++T +
Sbjct: 258 FVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY---GIRPDIVAFTVFID 314
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
L KAGF+ A VL ++ G+S + ++ + ++ G+CK + ++A +L+ ++
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF----RLR 370
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
P++ Y+ + D A + F E+ G+ P + YTT++ + G+ A +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 537 FDEMV---NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
F ++ N P + I L+ R G G DV TY + +
Sbjct: 431 FGALLKSGNPPSLTTSTI----LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 594 GIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRK 653
G + + L +E++ AG + PD + L V + +
Sbjct: 487 GYGKTHQLNKVFELIDEMR---SAG------------ISPDVATYNILIHSMVVRGYIDE 531
Query: 654 ALEIVACMEENGIPPNKTKFTRI 676
A EI++ + G P+ FT +
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDV 554
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L+ + D P +++ +++ ++ AR+ + M G N ++ ++
Sbjct: 221 LKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRK 280
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
YC DK ELL M I+PD+V++ + ID A S +++ GI+
Sbjct: 281 YCSDGYFDKGWELLMGMKHYG-IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+S ++++ F G+P+ A + +++ R++ ++ ++ + C G
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI 395
Query: 573 XXXXXXNGFHPDVGTYGSFANG 594
G PD Y + +G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDG 417
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/579 (21%), Positives = 233/579 (40%), Gaps = 89/579 (15%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
+ M+ G P V A + ++ G A+ L R R+ I DT
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISI-----------DT 161
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+N V++ G Q EM + G++PD +SYN ++ C+ +++
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 275 ILEQNV---PLCMTT---LHSLVAAYVDFG------DLDTAEIIVQAMREKRRDLCRILR 322
I E N+ + +++ LH++ AY D D+ T I+ + + + L L
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
E + + V L +S+ ++ ++ + + +YT LM G K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
+G + + + + M +D+ P+ V+YT +V L KAG + A ++ +M V N
Sbjct: 342 AGDLREAEKTFK-MLLEDNQV--PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
+TY+ ++ GY K+ +++A LLR+M ED + P+ +Y +IDG A+
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 503 NEMR-----------------------------------ARGIAPTKISYTTLMKAFALS 527
EMR ++G+ +I+YT+L+ F
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 528 GQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
G + A +EM + + D++++N+L+ G + G G PD+ T
Sbjct: 518 GDEEAALAWAEEM-QERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIAT 575
Query: 588 YGSFANGIALARKPGEA---LILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADI 644
+ N RK G++ L LW+++K +KP + + +
Sbjct: 576 FNIMMNS---QRKQGDSEGILKLWDKMKS---------------CGIKPSLMSCNIVVGM 617
Query: 645 CVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSR 683
+A+ I+ M I PN T + RI+++ S+
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTY-RIFLDTSSK 655
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 20/315 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
PD FN ++N+ GD + L+L+D+M G+ P +S NIV+ + C + + +
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L +++ + +H + Y F LDT+ + KR D E+ Y
Sbjct: 630 ILNQMM-------LMEIHPNLTTYRIF--LDTSS------KHKRADAIFKTHETLLSYGI 674
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+ V+ L+ ++ + + + + + P+T + +LM GY V +
Sbjct: 675 KLSRQVYNTLIA-TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
M ++ P+ +Y T++ L AG + + L+EM G+ + TYN L+
Sbjct: 734 STYSVMM---EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
G K + + + EM D + P +YN+LI V A EM RG+
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLV-PKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 511 APTKISYTTLMKAFA 525
+P +Y T++
Sbjct: 850 SPNTSTYCTMISGLC 864
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 130/319 (40%), Gaps = 31/319 (9%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
+ P L P ++ TL + Y+ R+ R L AM PD + +++
Sbjct: 45 FDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMC---TFGVVPDSRLWNSLIH 101
Query: 417 ALVKAGFM-DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
G + D+ + ++M GVS + N+L+ +CK ++ A LLR + I
Sbjct: 102 QFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR----NRVI 157
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
D V+YN +I G + A F +EM GI P +SY TL+ F G A
Sbjct: 158 SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKA 217
Query: 536 VFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
+ DE+ +++LI +L+ Y L +GF PDV T+ S N +
Sbjct: 218 LVDEI-----SELNLITHTILLSSYYNL---HAIEEAYRDMVMSGFDPDVVTFSSIINRL 269
Query: 596 ALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKAL 655
K E +L E++E + P+ TL D +A +R AL
Sbjct: 270 CKGGKVLEGGLLLREMEEM---------------SVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 656 EIVACMEENGIPPNKTKFT 674
+ + M GIP + +T
Sbjct: 315 ALYSQMVVRGIPVDLVVYT 333
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/525 (20%), Positives = 205/525 (39%), Gaps = 99/525 (18%)
Query: 157 KSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGA 216
+ M+ SG+ P V +S++++RL G +E GL LR++ + V P+
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEG-GLL------LREMEEMSV----YPNHVT 296
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
+ ++++ + + L L+ +M G+ D + Y ++M + + +L
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV 336
E N + T +LV GDL +AE I+ M EK + + Y N V
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS------VIPNVVTYSSMINGYV 410
Query: 337 FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM 396
+ +L +++ V PN Y T++ G K+G+ + + + M
Sbjct: 411 KKGMLEEAVSLLRKMEDQNV----------VPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 397 RR---------QDDSASHP-----------------------DHVSYTTVVSALVKAGFM 424
R D +H D ++YT+++ K G
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCK--QLQIDKARELLREMAEDAEIQPDVVSY 482
+ A EM G+ + ++YN+L+ G K ++ D A + +RE I+PD+ ++
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKG----IEPDIATF 576
Query: 483 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV- 541
NI+++ DS G L +++M++ GI P+ +S ++ +G+ + A + ++M+
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 542 ----------------NDPRVKVDLI-----------------AWNMLVEGYCRLGXXXX 568
+ + D I +N L+ C+LG
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
GF PD T+ S +G + +AL ++ + E
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 132/333 (39%), Gaps = 33/333 (9%)
Query: 157 KSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGA 216
K M G P + ++ +++ GDS L K+ D + +P +
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGIL-----------KLWDKMKSCGIKPSLMS 610
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
N V+ +G + + + ++M + P+ +Y I + + R D + E +L
Sbjct: 611 CNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLL 670
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV 336
+ L ++L+A G A +++ M + G D+V
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR----------------GFIPDTV 714
Query: 337 -FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
F L+ S Y ++ +PN Y T+++G +G + + + L
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYS-VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M+ + PD +Y ++S K G M + + EM G+ TYN+L+ +
Sbjct: 774 MKSR---GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
++ +ARELL+EM + + P+ +Y +I G
Sbjct: 831 VGKMLQARELLKEMGKRG-VSPNTSTYCTMISG 862
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 33/409 (8%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P + + ++ C + + L++F++ + + N + L C++ + D
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY--- 328
L+ + ++ + + ++++ A+ ++D A I M EK L +N Y
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG------LEPNNFTYSIL 525
Query: 329 IGG--KN-DSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
I G KN D + N MN S + N IY T++ G K G+
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASN----------------FEANEVIYNTIINGLCKVGQ 569
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
S ML+ + ++ + SY +++ VK G D A + EM+ G S N +T
Sbjct: 570 TSKAKEMLQNLIKEKRYSM--SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT 627
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+ L+ G+CK ++D A E+ EM + E++ D+ +Y LIDG +D A + F+E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEM-KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G+ P Y +L+ F G+ A ++ +MVND + DL + +++G + G
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG-ISCDLFTYTTMIDGLLKDGN 745
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G PD + NG++ + +A + E+K++
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 162/394 (41%), Gaps = 34/394 (8%)
Query: 224 CANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLC 283
C + GK L LF+ M + G+ PD + ++++++ C+ + + R+ +
Sbjct: 356 CKGNELGKA-LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 284 MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI--GGKNDSVFQKLL 341
+H+++ + E I +S +I G + +F
Sbjct: 415 SVLVHTMIQGCLK--------------AESPEAALEIFNDSFESWIAHGFMCNKIFLLFC 460
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY--MKSGRVSDTV--RMLEAMR 397
+ + Q K PN Y +M + MK+ ++ ++ MLE
Sbjct: 461 KQGKVDAATSFLKMMEQ-----KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE--- 512
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
P++ +Y+ ++ K A V+ +M AN + YN ++ G CK
Sbjct: 513 ----KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
Q KA+E+L+ + ++ SYN +IDG + V D+ A+ + EM G +P +++
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
T+L+ F S + LA + EM +K+DL A+ L++G+C+
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEM-KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 578 XNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
G P+V Y S +G K A+ L+ ++
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
R + L+ Y+++ R+ V M D P V+S+LV++ +D A+++
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMV---DRKVVPFVPYVNNVLSSLVRSNLIDEAKEI 226
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLRE-MAEDAEIQPDVVSYNILIDGC 489
+M IGV+ + +T +L++ ++ + ++A ++ R M+ AE PD + +++ +
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAE--PDGLLFSLAVQAA 284
Query: 490 ILVDDSAGALSFFNEMRAR-GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
D AL EMR + G+ ++ +YT+++ AF G + A RV DEMV + +
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG-FGIPM 343
Query: 549 DLIAWNMLVEGYCR 562
+IA LV GYC+
Sbjct: 344 SVIAATSLVNGYCK 357
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 148/379 (39%), Gaps = 66/379 (17%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
YT+++ ++K G + + VR+++ M S ++ T++V+ K + +A +
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSV---IAATSLVNGYCKGNELGKALDLFN 369
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M G++ +++ ++++++ +CK ++++KA E M + I P V + +I GC+
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM-KSVRIAPSSVLVHTMIQGCLKA 428
Query: 493 DDSAGALSFFNE----------------------------------MRARGIAPTKISYT 518
+ AL FN+ M +GI P + Y
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
+M A LA +F EM+ + ++ + +++L++G+ +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEML-EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 579 NGFHPDVGTYGSFANGIALARKPGEAL-ILWNEVKE-RWEAGRDRENSDSSVPPLKPDEG 636
+ F + Y + NG+ + +A +L N +KE R+ NS
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS------------ 595
Query: 637 LLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQD 696
+ D V+ A+E M ENG PN FT + + R D
Sbjct: 596 ----IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL---------INGFCKSNRMD 642
Query: 697 RRVERKRAAEAFKFWLGLP 715
+E ++ + L LP
Sbjct: 643 LALEMTHEMKSMELKLDLP 661
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 149/380 (39%), Gaps = 59/380 (15%)
Query: 233 FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVA 292
FL++ M Q G+ P+ + YN +M CR DL + +LE+ + T L+
Sbjct: 471 FLKM---MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 293 AYVDFGDLDTAEIIVQAMREKRRD------------LCRILRESNSE-----YIGGKNDS 335
+ D A ++ M + LC++ + S ++ I K S
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 336 V----FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ + ++ + Y+ + +PN +T+L+ G+ KS R+ +
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYRE-MSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 392 MLEAMR-------------------RQDDSAS-------------HPDHVSYTTVVSALV 419
M M+ +++D + P+ Y +++S
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 420 KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDV 479
G MD A + +M G+S + TY ++ G K I+ A +L E+ D I PD
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL-DLGIVPDE 765
Query: 480 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
+ + +L++G A EM+ + + P + Y+T++ G A R+ DE
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 540 MVNDPRVKVDLIAWNMLVEG 559
M+ V D + +N+LV G
Sbjct: 826 MLEKGIVHDDTV-FNLLVSG 844
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 153/372 (41%), Gaps = 47/372 (12%)
Query: 232 MFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV----FVLERILEQNVPLCMTTL 287
M L D +FG ++N ++ R R D V +++R + VP L
Sbjct: 152 MVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVL 211
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPN-SMN 346
SLV + + +D A+ I M IG D+V +LL S+
Sbjct: 212 SSLVRSNL----IDEAKEIYNKMV----------------LIGVAGDNVTTQLLMRASLR 251
Query: 347 QSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHP 406
+ +++ ++ + P+ +++ ++ K+ D V L+ +R P
Sbjct: 252 ERKPEEAVKIFRR-VMSRGAEPDGLLFSLAVQAACKT---PDLVMALDLLREMRGKLGVP 307
Query: 407 -DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
+YT+V+ A VK G M+ A +V+ EM G+ + I L+ GYCK ++ KA +L
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL 367
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
M E+ + PD V ++++++ + A+ F+ M++ IAP+ + T+++
Sbjct: 368 FNRMEEEG-LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAW-------NMLVEGYCRLGXXXXXXXXXXXXXX 578
+ P+ A +F++ +W N + +C+ G
Sbjct: 427 KAESPEAALEIFND---------SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 579 NGFHPDVGTYGS 590
G P+V Y +
Sbjct: 478 KGIEPNVVFYNN 489
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/308 (16%), Positives = 127/308 (41%), Gaps = 31/308 (10%)
Query: 113 TRAQSILTRLRNERQLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWS 172
++A+ +L L E++ + + S T A + M +G P+V ++
Sbjct: 571 SKAKEMLQNLIKEKR-YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 173 AVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKM 232
++++ S + L +T ++ + + + D A+ A+++ D K
Sbjct: 630 SLINGFCKSN----RMDLALEMTHEMKSM-------ELKLDLPAYGALIDGFCKKNDMKT 678
Query: 233 FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVA 292
LF E+P+ G++P+ YN ++ + D + + ++++ + + T +++
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 293 AYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXX 352
+ G+++ A + + + +G D + +L N +++
Sbjct: 739 GLLKDGNINLASDLYSELLD----------------LGIVPDEILHMVLVNGLSKKGQFL 782
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT 412
+ K TPN +Y+T++ G+ + G +++ R+ + M + H D V +
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK--GIVHDDTV-FN 839
Query: 413 TVVSALVK 420
+VS V+
Sbjct: 840 LLVSGRVE 847
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 6/232 (2%)
Query: 382 KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
K GRVS M + Q+D S D SYT+++SA +G A V +M G
Sbjct: 185 KEGRVSSAANMFNGL--QEDGFSL-DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 442 NRITYNILLKGYCKQ-LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
ITYN++L + K +K L+ +M D I PD +YN LI C A
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
F EM+A G + K++Y L+ + S +PK A +V +EMV + ++ +N L+ Y
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAY 359
Query: 561 CRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
R G G PDV TY + +G A K A+ ++ E++
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/579 (20%), Positives = 223/579 (38%), Gaps = 76/579 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRA------------------ 193
AA++ + G+ V ++++++S A+SG EA+ +F+
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 194 -----------VTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQ 242
+T + K+ +A PD +N ++ C + Q+F+EM
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIA----PDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 243 FGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDT 302
G D ++YN ++ + + R + VL ++ + T +SL++AY G LD
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 303 AEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLL 362
A + M EK G K D L + ++ +
Sbjct: 368 AMELKNQMAEK----------------GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 363 PKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG 422
PN + +K Y G+ ++ +++ + + + PD V++ T+++ + G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI---NVCGLSPDIVTWNTLLAVFGQNG 468
Query: 423 FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSY 482
V EM R G R T+N L+ Y + ++A + R M DA + PD+ +Y
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTY 527
Query: 483 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM-- 540
N ++ + EM P +++Y +L+ A+A + L H + +E+
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 541 -VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALAR 599
V +PR L+ +LV C L GF PD+ T S + +
Sbjct: 588 GVIEPRAV--LLKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 600 KPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
+A + + +KER P ++L + R+A F K+ EI+
Sbjct: 644 MVAKANGVLDYMKERG---------------FTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 660 CMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRR 698
+ GI P+ + + + + R + ASR + R
Sbjct: 689 EILAKGIKPDIISYNTV-IYAYCRNTRMRDASRIFSEMR 726
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 177/423 (41%), Gaps = 54/423 (12%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S+ + M +G P++ ++A + + G E + +F + +V S
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI----------NVCGLS- 451
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +L +G +F EM + G VP+ ++N ++ R + + V
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-----RDLCRILRESNS 326
R+L+ V ++T ++++AA G + +E ++ M + R C +L
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA--- 568
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
Y GK + L VY + P+ + TL+ K +
Sbjct: 569 -YANGKEIGLMHSL------------AEEVYSGVIEPRAV-----LLKTLVLVCSKCDLL 610
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY 446
+ R ++ + S PD + ++VS + + +A VL M G + + TY
Sbjct: 611 PEAERAFSELKERGFS---PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 447 NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMR 506
N L+ + + K+ E+LRE+ I+PD++SYN +I A F+EMR
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 507 ARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV------DLIAWNMLVEGY 560
GI P I+Y T + ++A A +F+E + R + + +N +V+GY
Sbjct: 727 NSGIVPDVITYNTFIGSYA-------ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 561 CRL 563
C+L
Sbjct: 780 CKL 782
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 183/499 (36%), Gaps = 74/499 (14%)
Query: 154 SVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPD 213
S+V+ M G P ++ +++ EA +F + AA D
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-----------AAGFSYD 313
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLE 273
+NA+L+ S K +++ +EM G P ++YN ++ R D + +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 274 RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE--------------------- 312
++ E+ + T +L++ + G +++A I + MR
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 313 KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
K ++ +I E N G D V L Q+ + + P
Sbjct: 434 KFTEMMKIFDEIN--VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ TL+ Y + G + + RR D+ PD +Y TV++AL + G +++ +VLA
Sbjct: 492 FNTLISAYSRCGSFE---QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI---DGC 489
EM N +TY LL Y +I L E+ I+P V L+ C
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-IEPRAVLLKTLVLVCSKC 607
Query: 490 ILVDDSAGALSFFNE--------------------------------MRARGIAPTKISY 517
L+ ++ A S E M+ RG P+ +Y
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
+LM + S + + E++ +K D+I++N ++ YCR
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 578 XNGFHPDVGTYGSFANGIA 596
+G PDV TY +F A
Sbjct: 727 NSGIVPDVITYNTFIGSYA 745
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 132/336 (39%), Gaps = 33/336 (9%)
Query: 153 ASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRP 212
+ V K M R+G++P + ++ ++S + G +A+ ++R ++ D V P
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR-------RMLDAGVT----P 522
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
D +N VL A A G + ++ EM P+ L+Y ++ L+ +
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-----RDLCRILRESNSE 327
E + + L +LV L AE ++E+ L ++
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPP--------------LLPKPYTPNTRIY 373
+ K + V + S +Y +L K P+ Y
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
T++ Y ++ R+ D R+ MR +S PD ++Y T + + + A V+
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMR---NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
M + G N+ TYN ++ GYCK + D+A+ + ++
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT 435
L+K + K G V + +L R+ ++ P +Y +++ LV A F+D A +V M
Sbjct: 193 LIKSFGKLGMVEE---LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 436 RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDS 495
+ + +TYN ++KGYCK Q KA E LR+M E + D ++Y +I C D
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDF 308
Query: 496 AGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNM 555
++ + EM +GI +++ ++ G+ + VF+ M+ K ++ + +
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTV 367
Query: 556 LVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
L++GY + G GF PDV TY NG+ + EAL
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 159/396 (40%), Gaps = 66/396 (16%)
Query: 184 SVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFL----QLFDE 239
S LG+ + RK+ + + P +N ++N ++ MF+ ++F+
Sbjct: 196 SFGKLGMVEELLWVWRKMKENGI----EPTLYTYNFLMNGLVSA----MFVDSAERVFEV 247
Query: 240 MPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGD 299
M + PD ++YN ++K C+ + + L + + T +++ A D
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 300 LDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQP 359
+ + Q M EK ++ + S IGG + V++
Sbjct: 308 FGSCVALYQEMDEKG---IQVPPHAFSLVIGG------------LCKEGKLNEGYTVFEN 352
Query: 360 PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALV 419
++ K PN IYT L+ GY KSG V D +R+L R D PD V+Y+ VV+ L
Sbjct: 353 -MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH---RMIDEGFKPDVVTYSVVVNGLC 408
Query: 420 K-----------------------------------AGFMDRARQVLAEMTRIGVSANRI 444
K AG +D A ++ EM+ G + +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
YN L+ + K ++D+A L + M E+ V +Y IL+ G + AL ++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
M +GI PT + L LSG+ A ++ DE+
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
L + +M+ GI PT +Y LM + A RVF E++ R+K D++ +N +++
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIK 265
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
GYC+ G G D TY + G + L+ E+ E+
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 6/249 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+T Y+ L+ Y K GR +R+ + M+ D+ P YTT++ K G +++A
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMK---DNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ EM R G S TY L+KG K ++D+A ++M D + PDVV N L++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG-LTPDVVFLNNLMN 346
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA-FALSGQPKLAHRVFDEMVNDPRV 546
V + F+EM PT +SY T++KA F FD+M D V
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS-V 405
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
+++L++GYC+ GF P Y S N + A++ A
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 607 LWNEVKERW 615
L+ E+KE +
Sbjct: 466 LFKELKENF 474
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 167/382 (43%), Gaps = 50/382 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + + M R+G P V ++ ++ L +G EA G ++ + LR PDV
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM---LRDGLTPDVVF--- 340
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDRKDLLVF 270
N ++N G + +F EM + P +SYN V+K L K +
Sbjct: 341 -----LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+++ +V T L+ Y ++ A ++++ M EK C S +G
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 331 GKN-----DSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+ +F++L N N S +R+Y ++K + K G+
Sbjct: 456 KAKRYEAANELFKELKENFGNVS---------------------SRVYAVMIKHFGKCGK 494
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+S+ V + M+ Q S PD +Y ++S +VKAG ++ A +L +M G A+ +
Sbjct: 495 LSEAVDLFNEMKNQ---GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAG----ALSF 501
+NI+L G+ + +A E+ E + + I+PD V+YN L+ GC AG A
Sbjct: 552 HNIILNGFARTGVPRRAIEMF-ETIKHSGIKPDGVTYNTLL-GCFA---HAGMFEEAARM 606
Query: 502 FNEMRARGIAPTKISYTTLMKA 523
EM+ +G I+Y++++ A
Sbjct: 607 MREMKDKGFEYDAITYSSILDA 628
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 191/495 (38%), Gaps = 66/495 (13%)
Query: 156 VKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTG 215
++ ++R+ Y V AV+S L V+ALG + V++ L +P +
Sbjct: 149 IQEVVRNTY---VSVSPAVLSEL------VKALGRAKMVSKALSVFYQAK-GRKCKPTSS 198
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMPQFG-VVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+N+V+ G + +++ EM G PD ++Y+ ++ + R D + + +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+ + + +L+ Y G ++ A + E +R C + +E I G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKA---LDLFEEMKRAGCSPTVYTYTELIKG--- 312
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+ ++ + +L TP+ LM K GRV + +
Sbjct: 313 ----------LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKA-GFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
M + P VSY TV+ AL ++ + +M VS + TY+IL+ GY
Sbjct: 363 EMGMWRCT---PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 454 CKQLQIDKARELLREMAEDA-----------------------------EIQPDVVS--- 481
CK +++KA LL EM E E++ + +
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 482 --YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
Y ++I + A+ FNEM+ +G P +Y LM +G A+ + +
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALAR 599
M + + D+ + N+++ G+ R G +G PD TY + A A
Sbjct: 540 M-EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAG 598
Query: 600 KPGEALILWNEVKER 614
EA + E+K++
Sbjct: 599 MFEEAARMMREMKDK 613
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 176/441 (39%), Gaps = 49/441 (11%)
Query: 165 LPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNAC 224
P +SA++S S E LG + R ++ D + +P + +L
Sbjct: 230 FPDTITYSALIS-------SYEKLGRNDSAIRLFDEMKDNCM----QPTEKIYTTLLGIY 278
Query: 225 ANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
G + L LF+EM + G P +Y ++K + R D + +L + +
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKR--------RDLCRILRESNSEYIGGKNDSV 336
L++L+ G ++ + M R + + L ES + + S
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV--SEVSSW 396
Query: 337 FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM 396
F K+ +S+ +P+ Y+ L+ GY K+ RV + +LE M
Sbjct: 397 FDKMKADSV---------------------SPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 397 RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR-IGVSANRITYNILLKGYCK 455
D+ P +Y ++++AL KA + A ++ E+ G ++R+ Y +++K + K
Sbjct: 436 ---DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFGK 491
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
++ +A +L EM PDV +YN L+ G + A S +M G
Sbjct: 492 CGKLSEAVDLFNEMKNQGS-GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
S+ ++ FA +G P+ A +F E + +K D + +N L+ + G
Sbjct: 551 SHNIILNGFARTGVPRRAIEMF-ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 576 XXXNGFHPDVGTYGSFANGIA 596
GF D TY S + +
Sbjct: 610 MKDKGFEYDAITYSSILDAVG 630
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 31/317 (9%)
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT-TVVSALVKAGFMDRARQVLAEMTRIG 438
YM R + R+ M R +VS + V+S LVKA + RA+ V ++
Sbjct: 129 YMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKA--LGRAKMVSKALSVFY 186
Query: 439 VSANR------ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+ R TYN ++ ++ Q +K E+ EM + + PD ++Y+ LI +
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
+ A+ F+EM+ + PT+ YTTL+ + G+ + A +F+EM +
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM-KRAGCSPTVYT 305
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE-- 610
+ L++G + G +G PDV + N + + E +++E
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 611 --------------VKERWEAGRDRENSDSSVPPLK-----PDEGLLDTLADICVRAAFF 651
+K +E+ S +K P E L D +
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 652 RKALEIVACMEENGIPP 668
KAL ++ M+E G PP
Sbjct: 426 EKALLLLEEMDEKGFPP 442
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 218/538 (40%), Gaps = 59/538 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S V+ M G + +S +V + +G + EA + +R+ K + +
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHA-EAADYWFDEAKRIHKTLNASI----- 416
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGV-VPDALSYNIVMKLCCRKDRKDLLVF 270
+ ++ A + + + L EM + G+ P A+ + ++ D K LV
Sbjct: 417 -----YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV- 470
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
V +R+ E + T L+ Y G + A ++ R+++E ++
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKA-----------LEVSRVMKEEGVKH-- 517
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG---RVS 387
N + ++ + V++ ++ + P+ +Y ++ + G R
Sbjct: 518 --NLKTYSMMINGFVKLKDWANAFAVFED-MVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
TV+ ++ +R + P ++ ++ K+G M R+ +V M R G T+N
Sbjct: 575 QTVKEMQKLRHR------PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
L+ G ++ Q++KA E+L EM A + + +Y ++ G V D+ A +F ++
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTL-AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV--NDPRVKVDLIAWNMLVEGYCRLGX 565
G+ +Y L+KA SG+ + A V EM N PR + +N+L++G+ R G
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR---NSFVYNILIDGWARRGD 744
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSD 625
G PD+ TY SF I+ K G+ ++E G
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSF---ISACSKAGDMNRATQTIEEMEALG------- 794
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSR 683
+KP+ TL RA+ KAL M+ GI P+K + + + SR
Sbjct: 795 -----VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
TP +RIYT+L+ Y GR D L +R+ + V+Y+ +V KAG +
Sbjct: 341 TPTSRIYTSLIHAYA-VGR--DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEA 397
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A E RI + N Y ++ +C+ +++A L+REM E+ I + Y+ ++
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMM 456
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
DG +V D L F ++ G PT ++Y L+ + G+ A V ++ + V
Sbjct: 457 DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGV 515
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
K +L ++M++ G+ +L G PDV Y
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 2/213 (0%)
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
+ S P + +V + G M RAR+ M G++ Y L+ Y +D
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 461 KARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
+A +R+M E+ I+ +V+Y++++ G + A +F+E + Y +
Sbjct: 362 EALSCVRKMKEEG-IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ A + + A + EM + + + ++ +++GY + G
Sbjct: 421 IYAHCQTCNMERAEALVREM-EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 581 FHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
F P V TYG N K +AL + +KE
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 183/457 (40%), Gaps = 40/457 (8%)
Query: 251 SYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
+Y+ V+ CR+ + + V L +++ + + +S+++ Y G +D A
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA------- 241
Query: 311 REKRRDLCRILRESNSEYIGGKNDSVF-QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPN 369
+ C +L+ G SV+ +L N + + P+
Sbjct: 242 ---KSFFCTVLK-------CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
+ Y L KG+ G +S E +R D PD ++YT ++ + G +D
Sbjct: 292 SVTYNILAKGFHLLGMISGA---WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 430 VLAEMTRIGVSANRIT-YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+L +M G N I +++L G CK +ID+A L +M D + PD+V+Y+I+I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG-LSPDLVAYSIVIHG 407
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ AL ++EM + I P ++ L+ G A + D +++ +
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET-L 466
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
D++ +N++++GY + G G P V T+ S G + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPP 668
+ +K + L P TL D + E+ M+ GIPP
Sbjct: 527 DVIK---------------LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 669 NKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAA 705
++ I+ + R + ++ + ++R E+ +
Sbjct: 572 TNVTYSVIFKGL-CRGWKHENCNHVLRERIFEKCKQG 607
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 184/457 (40%), Gaps = 49/457 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRR---LRKITDPDVAA 208
A V++ ML G P V ++ ++ G+ L L + + R L I V
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
TG + L+ LF++M G+ PD ++Y+IV+ C+ + D+
Sbjct: 371 SGLCKTGRIDEALS-------------LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+++ + + ++ + T +L+ G L A ++ ++ L
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL----------- 466
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
D V ++ + +S ++ TP+ + +L+ GY K+ +++
Sbjct: 467 -----DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
++L+ ++ + P VSYTT++ A G ++ EM G+ +TY++
Sbjct: 522 ARKILDVIKLYGLA---PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 449 LLKGYCKQLQ------------IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
+ KG C+ + +K ++ LR+M E I PD ++YN +I V +
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM-ESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
GA F M++R + + +Y L+ + + G + A F + + V + A+ L
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS-FIYSLQEQNVSLSKFAYTTL 696
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
++ +C G GF+ + Y + N
Sbjct: 697 IKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 181/468 (38%), Gaps = 29/468 (6%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
D P +FN++++ G M F + + G+VP S+NI++ C
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 276
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ + + + V T + L + G + A +++ M +K
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK--------------- 321
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI-YTTLMKGYMKSGRVS 387
G D + +L Q V +L + + N+ I + ++ G K+GR+
Sbjct: 322 -GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + M+ S PD V+Y+ V+ L K G D A + EM + N T+
Sbjct: 381 EALSLFNQMKADGLS---PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
LL G C++ + +AR LL + E D+V YNI+IDG AL F +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
GI P+ ++ +L+ + + A ++ D ++ + ++++ L++ Y G
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA-LILWNEVKERWEAG-RDRENSD 625
G P TY G+ K +L + E+ + G RD E+
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES-- 613
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
+P PD+ +T+ R A + M+ + + +
Sbjct: 614 EGIP---PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 168/423 (39%), Gaps = 91/423 (21%)
Query: 206 VAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDR 264
+ + P+ F +++ G ++FD+M G+ P+ ++Y I++ LC R
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 265 KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES 324
D E N P + ++L+ + G + V+A R L E
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAH-NALLDGFCKLGRM------VEAFELLR------LFEK 296
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
+ +G + + L+ +Y +L K P+ +YT L++G K+G
Sbjct: 297 DGFVLGLRG---YSSLIDGLFRARRYTQAFELY-ANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 385 RVSDTVRMLEAMRRQ--------------------------------DDSASHPDHVSYT 412
++ D +++L +M + ++ S PD ++T
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 413 TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA-- 470
++ ++ + G + A ++ E+ + G S + T+N L+ G CK ++ +AR LL +M
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Query: 471 ------------------------------------EDAEIQPDVVSYNILIDGCILVDD 494
D PD+VSYN+LI+G D
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 495 SAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVF---DEMVNDPRVKVDLI 551
GAL N ++ +G++P ++Y TL+ G+ + A ++F D+ + P V L+
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLM 592
Query: 552 AWN 554
W+
Sbjct: 593 TWS 595
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
+PN + LM G K GR SD +M + M + S P+ V+YT ++S L + G D
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS---PNRVTYTILISGLCQRGSADD 251
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA------------- 473
AR++ EM G + + +N LL G+CK ++ +A ELLR +D
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 474 ---------------------EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
I+PD++ Y ILI G AL + M ++GI+P
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
Y ++KA G + + EM ++ D +L+ CR G
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEM-SETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGR 619
+G P V T+ + +G+ + + EA +L +++ E GR
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM----EVGR 473
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 53/295 (17%)
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
+ V+ L + D Q L E+ GVS + + +L+ Y K +KA E M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 471 EDAEIQPDVVSYN------------------------------------ILIDGCILVDD 494
E + +PDV +YN IL+DG
Sbjct: 155 E-FDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 495 SAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWN 554
++ A F++M RGI+P +++YT L+ G A ++F EM D +A N
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYP-DSVAHN 272
Query: 555 MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
L++G+C+LG +GF + Y S +G+ AR+ +A L+ + ++
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 615 WEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+KPD L L +A AL++++ M GI P+
Sbjct: 333 ---------------NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P+ ++ ++ L K G A+++ +MT G+S NR+TY IL+ G C++ D AR+L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
EM PD V++N L+DG + A G Y++L+
Sbjct: 256 FYEMQTSGN-YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+ + A ++ M+ +K D+I + +L++G + G G PD
Sbjct: 315 RARRYTQAFELYANMLK-KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373
Query: 586 GTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADIC 645
Y + + G L+ E GR + S PD L
Sbjct: 374 YCYNAVIKALC-----GRGLL---------EEGRSLQLEMSETESF-PDACTHTILICSM 418
Query: 646 VRAAFFRKALEIVACMEENGIPPNKTKF 673
R R+A EI +E++G P+ F
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATF 446
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 183/457 (40%), Gaps = 40/457 (8%)
Query: 251 SYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
+Y+ V+ CR+ + + V L +++ + + +S+++ Y G +D A
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA------- 241
Query: 311 REKRRDLCRILRESNSEYIGGKNDSVF-QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPN 369
+ C +L+ G SV+ +L N + + P+
Sbjct: 242 ---KSFFCTVLK-------CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
+ Y L KG+ G +S E +R D PD ++YT ++ + G +D
Sbjct: 292 SVTYNILAKGFHLLGMISGA---WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 430 VLAEMTRIGVSANRIT-YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+L +M G N I +++L G CK +ID+A L +M D + PD+V+Y+I+I G
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG-LSPDLVAYSIVIHG 407
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ AL ++EM + I P ++ L+ G A + D +++ +
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET-L 466
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
D++ +N++++GY + G G P V T+ S G + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPP 668
+ +K + L P TL D + E+ M+ GIPP
Sbjct: 527 DVIK---------------LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 669 NKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAA 705
++ I+ + R + ++ + ++R E+ +
Sbjct: 572 TNVTYSVIFKGL-CRGWKHENCNHVLRERIFEKCKQG 607
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 184/457 (40%), Gaps = 49/457 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRR---LRKITDPDVAA 208
A V++ ML G P V ++ ++ G+ L L + + R L I V
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
TG + L+ LF++M G+ PD ++Y+IV+ C+ + D+
Sbjct: 371 SGLCKTGRIDEALS-------------LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+++ + + ++ + T +L+ G L A ++ ++ L
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL----------- 466
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
D V ++ + +S ++ TP+ + +L+ GY K+ +++
Sbjct: 467 -----DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
++L+ ++ + P VSYTT++ A G ++ EM G+ +TY++
Sbjct: 522 ARKILDVIKLYGLA---PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 449 LLKGYCKQLQ------------IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
+ KG C+ + +K ++ LR+M E I PD ++YN +I V +
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM-ESEGIPPDQITYNTIIQYLCRVKHLS 637
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
GA F M++R + + +Y L+ + + G + A F + + V + A+ L
Sbjct: 638 GAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS-FIYSLQEQNVSLSKFAYTTL 696
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
++ +C G GF+ + Y + N
Sbjct: 697 IKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 181/468 (38%), Gaps = 29/468 (6%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
D P +FN++++ G M F + + G+VP S+NI++ C
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 276
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ + + + V T + L + G + A +++ M +K
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK--------------- 321
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI-YTTLMKGYMKSGRVS 387
G D + +L Q V +L + + N+ I + ++ G K+GR+
Sbjct: 322 -GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + M+ S PD V+Y+ V+ L K G D A + EM + N T+
Sbjct: 381 EALSLFNQMKADGLS---PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
LL G C++ + +AR LL + E D+V YNI+IDG AL F +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXX 567
GI P+ ++ +L+ + + A ++ D ++ + ++++ L++ Y G
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 568 XXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA-LILWNEVKERWEAG-RDRENSD 625
G P TY G+ K +L + E+ + G RD E+
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES-- 613
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
+P PD+ +T+ R A + M+ + + +
Sbjct: 614 EGIP---PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN+ Y+ L+ G + GR+ + + + M + P +YT ++ AL G +D+A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQM---GEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ EM G N TY +L+ G C+ +I++A + R+M +D I P V++YN LI+
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-RIFPSVITYNALIN 379
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G A M R P ++ LM+ G+P A + M+ D +
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML-DNGLS 438
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
D++++N+L++G CR G PD T+ + N K G+A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC---KQGKA 492
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 150/326 (46%), Gaps = 31/326 (9%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P+V+ ++ ++ L G +A+ L L+++ D ++ PD ++N +++
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHL-------LKRMLDNGLS----PDIVSYNVLIDGLC 452
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
G +L M F + PD L++ ++ C++ + D+ L +L + + L
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM 345
T +L+ G A I++ + + RIL +S + + L
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKM-----RILTTPHSLNV------ILDMLSKGCK 561
Query: 346 NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH 405
+ + + L+P T YTTL+ G ++SG ++ + R+LE M+ S
Sbjct: 562 VKEELAMLGKINKLGLVPSVVT-----YTTLVDGLIRSGDITGSFRILELMKL---SGCL 613
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P+ YT +++ L + G ++ A ++L+ M GVS N +TY +++KGY ++D+A E
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 466 LREMAEDAEIQPDVVSYNILIDGCIL 491
+R M E D + Y+ L+ G +L
Sbjct: 674 VRAMVERGYELNDRI-YSSLLQGFVL 698
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 178/472 (37%), Gaps = 71/472 (15%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P+ ++S ++ L G EA GL D +P T + ++ A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGL-----------KDQMGEKGCQPSTRTYTVLIKALC 312
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
+ G LFDEM G P+ +Y +++ CR + + V ++++ + +
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM 345
T ++L+ Y G + A ++ M EKR C+ N F +L+
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVM-EKRA--CK------------PNVRTFNELMEGLC 417
Query: 346 NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH 405
+ + +L +P+ Y L+ G + G ++ ++L +M D
Sbjct: 418 RVGKPYKAVHLLK-RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD---IE 473
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
PD +++T +++A K G D A L M R G+S + +T L+ G CK + K R+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK---VGKTRDA 530
Query: 466 L--------------------------------REMAEDAEIQ-----PDVVSYNILIDG 488
L E+A +I P VV+Y L+DG
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
I D G+ M+ G P YT ++ G+ + A ++ M D V
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM-QDSGVSP 649
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
+ + + ++V+GY G G+ + Y S G L++K
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 18/278 (6%)
Query: 397 RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ 456
RR + + Y T+V+AL K G+ + A ++++ +IG + LL G+C+
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKIS 516
L + A ++ M+++ P+ VSY+ILI G V A ++M +G P+ +
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMVNDPR-VKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
YT L+KA G A +FDEM+ PR K ++ + +L++G CR G
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMI--PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDE 635
+ P V TY + NG + A L +++R KP+
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR---------------ACKPNV 406
Query: 636 GLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
+ L + R KA+ ++ M +NG+ P+ +
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ + + + + Y +G+ V++ M + D S+ T++ L K+ +++A
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMH---EHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ + R S + +TYN++L G+C + KA E+L+EM E I P++ +YN ++
Sbjct: 181 YELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG-INPNLTTYNTMLK 238
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
G A FF EM+ R ++YTT++ F ++G+ K A VFDEM+ + V
Sbjct: 239 GFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG-VL 297
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
+ +N +++ C+ G+ P+V TY G+
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ + PN Y T++KG+ ++G++ M+++D D V+YTTVV
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD---CEIDVVTYTTVVHGFGV 277
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
AG + RAR V EM R GV + TYN +++ CK+ ++ A + EM +P+V
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG-YEPNVT 336
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+YN+LI G + + M G P +Y +++ ++ + + A +F++M
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 541 VNDPRVKVDLIAWNMLVEG 559
+ + +L +N+L+ G
Sbjct: 397 GSGDCLP-NLDTYNILISG 414
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 18/264 (6%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P ++ V AG D+A ++ M G + ++N +L CK +++KA EL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
R A D V+YN++++G L+ + AL EM RGI P +Y T++K F
Sbjct: 184 FR--ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+GQ + A F EM ++D++ + +V G+ G G P V
Sbjct: 242 RAGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 586 GTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADIC 645
TY + + A++++ E+ R +P+ + L
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRR---------------GYEPNVTTYNVLIRGL 345
Query: 646 VRAAFFRKALEIVACMEENGIPPN 669
A F + E++ ME G PN
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPN 369
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 36/352 (10%)
Query: 160 LRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNA 219
LR G P K ++ V R AS+G +A+ LF + D +FN
Sbjct: 120 LRIG--PSPKTFAIVAERYASAGKPDKAVKLFLNMHEH-----------GCFQDLASFNT 166
Query: 220 VLNACANSGDGKMFLQLFDEM-PQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
+L+ S + +LF + +F V D ++YN+++ C R + VL+ ++E+
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
+ +TT ++++ + G + A M K+RD C I + + + G +
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM--KKRD-CEIDVVTYTTVVHGFGVAGEI 281
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
K N ++ ++ + P+ Y +++ K V + V M E M R
Sbjct: 282 KRARNVFDE-------------MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+ P+ +Y ++ L AG R +++ M G N TYN++++ Y + +
Sbjct: 329 R---GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
++KA L +M + P++ +YNILI G + S + N+ A+ I
Sbjct: 386 VEKALGLFEKMG-SGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 436
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 5/245 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
++ +T Y ++ G+ R T + LE ++ + +P+ +Y T++ +AG +
Sbjct: 191 FSVDTVTYNVILNGWCLIKR---TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIR 247
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A + EM + + +TY ++ G+ +I +AR + EM + + P V +YN +
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG-VLPSVATYNAM 306
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I D+ A+ F EM RG P +Y L++ +G+ + M N+
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG- 365
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+ + +NM++ Y P++ TY +G+ + ++ + +
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Query: 606 ILWNE 610
+ N+
Sbjct: 426 VAGNQ 430
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V+K M+ G P++ ++ ++ +G A F + +R D
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-----------DCE 262
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D + V++ +G+ K +FDEM + GV+P +YN ++++ C+KD + V +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
E ++ + +TT + L+ G+ E ++Q M
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 5/241 (2%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ + K + G ++R+ + M+RQ P+ YT ++S L + G +D+ +V
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQ--IWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM GVS + +Y L+ Y + + + + ELL M ++ +I P +++YN +I+ C
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINACARG 224
Query: 493 D-DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
D G L F EMR GI P ++Y TL+ A A+ G A VF M ND + DL
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLT 283
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
++ LVE + +L G PD+ +Y A + EA+ +++++
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 612 K 612
+
Sbjct: 344 Q 344
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 177/461 (38%), Gaps = 77/461 (16%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMP-QFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERI 275
F V A GD + L+LF M Q P+ Y I++ L R+ D + V + +
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 276 LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDS 335
Q V + + +L+ AY G +T+ ++ M KN+
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM---------------------KNEK 206
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
+ +P+ Y T++ + G + + L A
Sbjct: 207 I------------------------------SPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
R + PD V+Y T++SA G D A V M G+ + TY+ L++ + K
Sbjct: 237 EMRHE--GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+++K +LL EMA + PD+ SYN+L++ A+ F++M+A G P
Sbjct: 295 LRRLEKVCDLLGEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXX 572
+Y+ L+ F SG+ ++F EM + DP D +N+L+E + G
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDP----DAATYNILIEVFGEGGYFKEVVTL 409
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLK 632
PD+ TY GI A G + E ++ VP K
Sbjct: 410 FHDMVEENIEPDMETY----EGIIFACGKG-------GLHEDARKILQYMTANDIVPSSK 458
Query: 633 PDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKF 673
G+++ +AA + +AL M E G P+ F
Sbjct: 459 AYTGVIEAFG----QAALYEEALVAFNTMHEVGSNPSIETF 495
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 137/341 (40%), Gaps = 59/341 (17%)
Query: 212 PDTGAFNAVLNACANSG-DGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
P +N V+NACA G D + L LF EM G+ PD ++YN ++ C + D
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
V + + + +TT LV FG L E + C +L E S G
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVET---FGKLRRLEKV-----------CDLLGEMAS---G 311
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
G P+ Y L++ Y KSG + + +
Sbjct: 312 GS----------------------------------LPDITSYNVLLEAYAKSGSIKEAM 337
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ M+ + P+ +Y+ +++ ++G D RQ+ EM + TYNIL+
Sbjct: 338 GVFHQMQA---AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
+ + + + L +M E+ I+PD+ +Y +I C A M A I
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 511 APTKISYTTLMKAF---ALSGQPKLAHRVFDEMVNDPRVKV 548
P+ +YT +++AF AL + +A E+ ++P ++
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 163/415 (39%), Gaps = 84/415 (20%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
++ M G LP + +++ ++ A SG EA+G+F + AA P+
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ-----------AAGCTPNA 352
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
++ +LN SG QLF EM PDA +YNI++++ +V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
++E+N+ M T ++ A G + A I+Q M ND
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT--------------------AND 452
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
V P+++ YT +++ + G+ + L
Sbjct: 453 IV-------------------------------PSSKAYTGVIEAF---GQAALYEEALV 478
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
A + S+P ++ +++ + + G + + +L+ + G+ NR T+N ++ Y
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 455 KQLQIDKARELLREMAEDAEIQPD---------VVSYNILIDGCILVDDSAGALSFFNEM 505
+ + ++A + +M E + PD V S+ L+D C F EM
Sbjct: 539 QGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDEC---------REQFEEM 588
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+A I P+ + Y ++ + + + + + +EM+++ + + M+ Y
Sbjct: 589 KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDY 643
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+S+ R+L M ++ PD V+ V +L + G +D A+ ++ E+T + T
Sbjct: 140 ISNVHRVLNLMV---NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YN LLK CK + E + EM +D +++PD+VS+ ILID + A+ +++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G P Y T+MK F + A V+ +M + V+ D I +N L+ G + G
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM-KEEGVEPDQITYNTLIFGLSKAGR 315
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
G+ PD TY S NG+
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA--GFMDRAR 428
+ + ++++ Y V+DTV++ + + + + P ++ ++S +A +
Sbjct: 86 KFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNF-RPGRSTFLILLSHACRAPDSSISNVH 144
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+VL M G+ +++T +I ++ C+ ++D+A++L++E+ E PD +YN L+
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTYTYNFLLKH 203
Query: 489 CILVDDSAGALSFFNEMRAR-GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
D F +EMR + P +S+T L+ S + A + ++ N K
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN-AGFK 262
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
D +N +++G+C L G PD TY + G++ A + EA
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+T Y L+K K + ++ MR DD PD VS+T ++ + + + A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMR--DDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+++++ G + YN ++KG+C + +A + ++M E+ ++PD ++YN LI
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG-VEPDQITYNTLIF 308
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
G A + M G P +YT+LM G
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 20/248 (8%)
Query: 211 RPDTGAFNAVLNACANSGDGKM--FLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
RP F +L+ + D + ++ + M G+ PD ++ +I ++ C R D
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+++ + E++ P T + L+ DL V MR+
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD--------------- 223
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
K D V +L +++ S L + P+ +Y T+MKG+ + S+
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
V + + M+ + PD ++Y T++ L KAG ++ AR L M G + TY
Sbjct: 284 AVGVYKKMKEE---GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 449 LLKGYCKQ 456
L+ G C++
Sbjct: 341 LMNGMCRK 348
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
+P+ + +L+ +K GR + + MRR PD ++ T+++ K +D
Sbjct: 170 SPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT--YGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA-EIQPDVVSYNIL 485
A ++ +M + + +TYN ++ G C+ ++ A +L M + A ++ P+VVSY L
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV---- 541
+ G + + A+ F++M +RG+ P ++Y TL+K + AHR +DE+
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS------EAHR-YDEIKDILI 340
Query: 542 --NDPRVKV--DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIAL 597
ND D +N+L++ +C G HPD +Y + +
Sbjct: 341 GGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCM 400
Query: 598 ARKPGEALILWNEVKER 614
+ A L+NE+ E+
Sbjct: 401 RNEFDRAETLFNELFEK 417
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 195/484 (40%), Gaps = 43/484 (8%)
Query: 189 GLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQ-FGVVP 247
GLF+ + + + ++ P FN++L+ G M LFDEM + +GV P
Sbjct: 152 GLFQESVKLFQTMKQMGIS----PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP 207
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
D+ ++N ++ C+ D + + + + + T ++++ G + A ++
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
M +K D+ N + L+ + V+ +L +
Sbjct: 268 SGMLKKATDV-------------HPNVVSYTTLVRGYCMKQEIDEAVLVFHD-MLSRGLK 313
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y TL+KG ++ R D ++ + + PD ++ ++ A AG +D A
Sbjct: 314 PNAVTYNTLIKGLSEAHRY-DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA------EIQPDVVS 481
+V EM + + + +Y++L++ C + + D+A L E+ E E +P +
Sbjct: 373 MKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA 432
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
YN + + + A F ++ RG+ SY TL+ G+ K A+ + M+
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYELLVLML 491
Query: 542 NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
V DL + +L++G ++G + + P T+ S +A +
Sbjct: 492 RREFVP-DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFA 550
Query: 602 GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
E+ L + E+ R R+N D S ++ + +A KA IV +
Sbjct: 551 NESFCLVTLMLEK----RIRQNIDLSTQVVR-----------LLFSSAQKEKAFLIVRLL 595
Query: 662 EENG 665
+NG
Sbjct: 596 YDNG 599
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 125/304 (41%), Gaps = 21/304 (6%)
Query: 376 LMKGYMKSGRVSDTVR-MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
LM ++ R + R L ++ R+ + + +++ + AG + ++ M
Sbjct: 105 LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTM 164
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI---L 491
++G+S + +T+N LL K+ + A +L EM + PD ++N LI+G +
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSM 224
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR-VKVDL 550
VD+ A F +M P ++Y T++ +G+ K+AH V M+ V ++
Sbjct: 225 VDE---AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNV 281
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+++ LV GYC G P+ TY + G++ A + ++E
Sbjct: 282 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------YDE 334
Query: 611 VKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 670
+K+ G D + PD + L A A+++ M + P+
Sbjct: 335 IKDILIGGND------AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 671 TKFT 674
++
Sbjct: 389 ASYS 392
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 4/239 (1%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y + + + ++ G+ K G+ + E+ D P+ V+YTT+VSAL + G +D
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFES--AVDSGVLVPNLVTYTTLVSALCQLGKVD 224
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
R ++ + G + + Y+ + GY K + A REM E + DVVSY+IL
Sbjct: 225 EVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG-MNRDVVSYSIL 283
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
IDG + AL +M G+ P I+YT +++ G+ + A +F+ +++
Sbjct: 284 IDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS-VG 342
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
++VD + L++G CR G G P + TY + NG+ +A + EA
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 159/364 (43%), Gaps = 39/364 (10%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD-- 266
D PDT + ++ +G + L++F+E+ + V A+ YN ++ C+K D
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTA 535
Query: 267 --LLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES 324
+L+ + E+ L ++ T LHS+ A D G L +V + + D+C
Sbjct: 536 TEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILG----LVYGLEQLNSDVC------ 585
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
+G ND++ S + + + P T I TL+
Sbjct: 586 ----LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPST----ILKTLV------- 630
Query: 385 RVSDTVRMLEA----MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
D +R L+A + + + S D + YT +++ L K GF+ +A + + GV+
Sbjct: 631 ---DNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 687
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
N ITYN L+ G C+Q + +A L + E+ + P V+Y ILID A
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+ M ++G+ P I Y +++ + GQ + A RV + RV D + +++GY
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM-GRVTPDAFTVSSMIKGY 805
Query: 561 CRLG 564
C+ G
Sbjct: 806 CKKG 809
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 177/414 (42%), Gaps = 50/414 (12%)
Query: 231 KMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNV--PLCMTTLH 288
K L L D + G P +L++ ++ K D + VLE + +NV P
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCS 175
Query: 289 SLVAAYVDFG--------------------DLDTAEIIVQAM-----REKRRDLCRILRE 323
++++ + G +L T +V A+ ++ RDL R L +
Sbjct: 176 AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 324 SNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
E+ D VF + + + ++ K + Y+ L+ G K
Sbjct: 236 EGFEF-----DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
G V + + +L M ++ P+ ++YT ++ L K G ++ A + + +G+ +
Sbjct: 291 GNVEEALGLLGKMIKE---GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
Y L+ G C++ +++A +L +M E IQP +++YN +I+G + AG +S +
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCM----AGRVSEAD 402
Query: 504 EMRARGIAPTKISYTTLMKAFA----LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
E+ ++G+ I+Y+TL+ ++ + ++ R + ++ +DL+ N+L++
Sbjct: 403 EV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL-----EAKIPMDLVMCNILLKA 456
Query: 560 YCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
+ +G PD TY + G + EAL ++NE+++
Sbjct: 457 FLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/533 (21%), Positives = 214/533 (40%), Gaps = 56/533 (10%)
Query: 155 VVKSMLRS-GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPD 213
+++ LR+ G P + +++ R G+ A+ + +T + + P D
Sbjct: 120 ILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNK--NVNYP-------FD 170
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGV-VPDALSYNIVMKLCCRKDRKDLLVFVL 272
+AV++ G ++ L F+ GV VP+ ++Y ++ C+ + D + ++
Sbjct: 171 NFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLV 230
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK--RRDLCR-------ILRE 323
R+ ++ + + Y G L A + + M EK RD+ + +E
Sbjct: 231 RRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
Query: 324 SN-SEYIGGKNDSVFQKLLPN---------SMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
N E +G + + + PN + + V +L + +Y
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
TL+ G + G ++ ML M ++ P ++Y TV++ L AG + A +V
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQR---GIQPSILTYNTVINGLCMAGRVSEADEVSK- 406
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
GV + ITY+ LL Y K ID E+ R E A+I D+V NIL+ +L+
Sbjct: 407 ----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE-AKIPMDLVMCNILLKAFLLMG 461
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
A + + M + P +Y T++K + +GQ + A +F+E+ + +
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA--VCY 519
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
N +++ C+ G G + D+ T + + I G+ IL
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI--HANGGDKGILG----- 572
Query: 614 RWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
G ++ NSD + L D + +C R + F A+E+ M G+
Sbjct: 573 -LVYGLEQLNSDVCLGMLN------DAILLLCKRGS-FEAAIEVYMIMRRKGL 617
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/560 (20%), Positives = 221/560 (39%), Gaps = 75/560 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ M++ G P++ ++A++ L G EA LF + ++
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI-----------LSVGIE 344
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
D + +++ G+ + +M Q G+ P L+YN V+ C R V
Sbjct: 345 VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGR----VSE 400
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR--RDL--CRILRES--- 324
+ + + V + T +L+ +Y+ ++D I + E + DL C IL ++
Sbjct: 401 ADEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459
Query: 325 NSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSG 384
Y G+ D++++ + P + TP+T Y T++KGY K+G
Sbjct: 460 MGAY--GEADALYRAM------------------PEM---DLTPDTATYATMIKGYCKTG 496
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
++ + + M +R+ SA+ V Y ++ AL K G +D A +VL E+ G+ +
Sbjct: 497 QIEEALEMFNELRKSSVSAA----VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIH 552
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV---DDSAGALSF 501
T LL + + + + + E V +L D +L+ A+
Sbjct: 553 TSRTLL----HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEV 608
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
+ MR +G+ T S T++K + + A+ + +D+I + +++ G C
Sbjct: 609 YMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDR 621
+ G G + TY S NG+ EAL L++ ++
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN-------- 718
Query: 622 ENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMH 681
L P E L D + F A +++ M G+ PN + I V+ +
Sbjct: 719 -------IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI-VDGY 770
Query: 682 SRMFTSKHASRARQDRRVER 701
++ ++ A R + + R
Sbjct: 771 CKLGQTEDAMRVVSRKMMGR 790
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
T NT Y +L+ G + G + + +R+ +++ ++ P V+Y ++ L K G
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSL---ENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA-RELLREMAEDAEIQPDVVSYNIL 485
A ++L M G+ N I YN ++ GYCK Q + A R + R+M + PD + + +
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM--GRVTPDAFTVSSM 801
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM-VNDP 544
I G D ALS F E + + I+ + L+K F G+ + A + EM V++
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSES 861
Query: 545 RVKV 548
VK+
Sbjct: 862 VVKL 865
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 360 PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALV 419
++ K PN IY +++ GY K G+ D +R++ R+ PD + ++++
Sbjct: 750 SMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS---RKMMGRVTPDAFTVSSMIKGYC 806
Query: 420 KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
K G M+ A V E +SA+ + L+KG+C + ++++AR LLREM
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 156/373 (41%), Gaps = 57/373 (15%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD A N +++ SG M + F E+ + G+ DA +Y +V++ R D K+ L +
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKL 239
Query: 272 LERIL--EQNVP----------LCMTTLHSLVAAYVDFGDLDTAEIIVQ------AMREK 313
L R+L E P LC+ + + AY L A I+V A R+
Sbjct: 240 LSRLLISETRNPCVFYLNFIEGLCLNQMTDI--AYFLLQPLRDANILVDKSDLGIAYRKV 297
Query: 314 RRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
R LC +R ++E SV + + ++ P+ +Y
Sbjct: 298 VRGLCYEMRIEDAE-------SVVLDMEKHGID---------------------PDVYVY 329
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
+ +++G+ K+ + V + M ++ + V ++++ + G A + E
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKK---RKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
+S +R+ YN+ K ++++A EL REM I PDV++Y LI GC L
Sbjct: 387 FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG-IAPDVINYTTLIGGCCLQG 445
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD--EMVNDPRVKVDLI 551
+ A EM G P + Y L A +G LA F+ +M+ + VK +
Sbjct: 446 KCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG---LAQEAFETLKMMENRGVKPTYV 502
Query: 552 AWNMLVEGYCRLG 564
NM++EG G
Sbjct: 503 THNMVIEGLIDAG 515
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 127/608 (20%), Positives = 236/608 (38%), Gaps = 126/608 (20%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA--- 208
A SVV M + G P V +SA++ + + +A+ +F + ++ ++I V++
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 209 ---------------------DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
+ D +N +A G + ++LF EM G+ P
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP 429
Query: 248 DALSYNIVMKLCCRK----DRKDLLV------------------------------FVLE 273
D ++Y ++ CC + D DL++ F
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Query: 274 RILE-QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI--- 329
+++E + V T + ++ +D G+LD AE +++ K R E+++ +
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR-------ENDASMVKGF 542
Query: 330 --GGKNDSVFQKL------LPNS----MNQSXXXXXXXVYQPP-LLPKPYT----PNTRI 372
G D F++ LP S + S + + LL + + P +
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y L+ + + V E + + PD +YT +++ + +A +
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTK---KIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+M R V + +TY++LL D ++ REM E ++ PDVV Y I+I+ +
Sbjct: 660 DMKRRDVKPDVVTYSVLLNS-------DPELDMKREM-EAFDVIPDVVYYTIMINRYCHL 711
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
+D + F +M+ R I P ++YT L+K +P+ R + VK D+
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPE---RNLSREMKAFDVKPDVFY 763
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG---EALILWN 609
+ +L++ C++G +G PD Y + IA K G EA ++++
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL---IACCCKMGYLKEAKMIFD 820
Query: 610 EVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+ E +KPD L C R F KA+++V M E GI P
Sbjct: 821 RMIE---------------SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 670 KTKFTRIY 677
K + ++
Sbjct: 866 KASLSAVH 873
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ L+KGY+K G V + R+ R DS V+ +++ L+K M+ QV
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVF---REVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
+ M R+G+ N T+NIL +C + + L +M E+ +PD+V+YN L+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG-FEPDLVTYNTLVSSYCR 283
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
A + M R + P ++YT+L+K G+ + AH+ F MV D +K D +
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCM 342
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
++N L+ YC+ G N PD T G
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P+ Y TL+ Y + GR+ + + + M R+ PD V+YT+++ L K G +
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR---RVVPDLVTYTSLIKGLCKDGRVR 323
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A Q M G+ + ++YN L+ YCK+ + ++++LL EM ++ + PD + ++
Sbjct: 324 EAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS-VVPDRFTCKVI 382
Query: 486 IDGCILVDDSAGALSFFNEMRARGI-APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
++G + A++F E+R + P ++ L+ + G+P A + D ++ +
Sbjct: 383 VEGFVREGRLLSAVNFVVELRRLKVDIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEE 441
Query: 545 RVKVDLIAWNMLVEGYCR 562
+ +N L+E R
Sbjct: 442 GHEAKPETYNNLIESLSR 459
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT + L + + LE M ++ PD V+Y T+VS+ + G + A
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKM---EEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M R V + +TY L+KG CK ++ +A + M D I+PD +SYN LI
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYNTLIY 349
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ +EM + P + + +++ F G+ A E+ R+K
Sbjct: 350 AYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL---RRLK 406
Query: 548 VDL--IAWNMLVEGYCRLGX-XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
VD+ + L+ C+ G G TY + ++ EA
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 605 LILWNEVKER 614
L+L ++K +
Sbjct: 467 LVLKGKLKNQ 476
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 128/351 (36%), Gaps = 55/351 (15%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+T FN + N N + + ++M + G PD ++YN ++ CR+ R ++
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ + + V + T SL+ G + A
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH--------------------------- 326
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
F +++ + P+ Y TL+ Y K G + + +
Sbjct: 327 ---QTFHRMVDRGIK---------------------PDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L M ++ PD + +V V+ G + A + E+ R+ V + L+
Sbjct: 363 LLHEML---GNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIV 419
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
C++ + A+ LL + E+ + +YN LI+ D AL +++ +
Sbjct: 420 SLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQV 479
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+Y L+ G+ + A + EM D VK D LV GYC+
Sbjct: 480 LDAKTYRALIGCLCRIGRNREAESLMAEMF-DSEVKPDSFICGALVYGYCK 529
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 57/245 (23%)
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT------------RIGVSA------N 442
D P+ +Y ++ LV + A Q L E+ R+ VSA +
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWD 165
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDA----------------------------- 473
+ +++L+KGY K +++ + RE+ +
Sbjct: 166 PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYS 225
Query: 474 -----EIQPDVVSYNILIDGCILVDDSA--GALSFFNEMRARGIAPTKISYTTLMKAFAL 526
I P+ ++NIL + + +DS F +M G P ++Y TL+ ++
Sbjct: 226 VMCRVGIHPNTYTFNILTN--VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 527 SGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVG 586
G+ K A ++ M RV DL+ + L++G C+ G G PD
Sbjct: 284 RGRLKEAFYLYKIMYRR-RVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 587 TYGSF 591
+Y +
Sbjct: 343 SYNTL 347
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 121/569 (21%), Positives = 229/569 (40%), Gaps = 121/569 (21%)
Query: 152 AASVVKSMLRSGY-LPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADS 210
A+SV + G +P+ ++ ++ ++ S S L V RL+++ D D
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVEL-----VEARLKEMRDCGFHFDK 214
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
T VL N+G + L +F+E+ G + + +S +V+ C + + D
Sbjct: 215 FTLT----PVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC-KWGQVDKAFE 269
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD------------LC 318
++E + E+++ L T L+ +V +D A + + MR + LC
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 319 RI--LRESNSEYIGGK------NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
+ L + S Y+ K + + KLL + +S V + K
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM--- 386
Query: 371 RIYTTLMKGYMKSGRV---------------SDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+Y +L +G++++ V SD V + + + + A PD S + V+
Sbjct: 387 LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVI 446
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+ LVKA +D A +L ++ + G+ + YN +++G CK+ + +++ +LL EM +DA +
Sbjct: 447 NCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-KDAGV 505
Query: 476 QPDVVSYNIL---------------------------------------------IDGCI 490
+P + N + +D C
Sbjct: 506 EPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACK 565
Query: 491 LVDDSAG-------------------------ALSFFNEMRARGIAPTKISYTTLMKAFA 525
+DD AG L F ++ A G P I+Y L+KA
Sbjct: 566 YLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALC 625
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+ + A +F+EMV+ +K + +N +++G+C+ G + +PDV
Sbjct: 626 KACRTMEADILFNEMVSKG-LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDV 684
Query: 586 GTYGSFANGIALARKPGEALILWNEVKER 614
TY S +G+ + +P EA+ WNE+K +
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 143/358 (39%), Gaps = 58/358 (16%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD+ + + V+N + M + L ++ Q G++P + YN +++ C++ R + + +
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 272 LERILEQNVP---LCMTTLHSLVAAYVDF-GDLDTAE---------------IIVQAMRE 312
L + + V + ++ +A DF G LD + +V+ + E
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 313 KRR--DLCRILRESNSEYIGG-------------KNDSV------FQKLLPN-------- 343
R D C+ L + E G KN+ V F+ + N
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 344 ------SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
++ ++ + ++ K P Y +++ G+ K G + R L +
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID---RGLSCIV 673
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
R + +PD ++YT+++ L +G A EM NRIT+ L++G CK
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+A REM E+ E++PD Y L+ + ++ F EM +G P +
Sbjct: 734 WSGEALVYFREM-EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 20/307 (6%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
R + +++ Y +G+ S+ V + E M+ + D + T + L + M+ AR
Sbjct: 140 RFFNSMIMVYSDNGKFSEVVEVFEYMKNNE---VKIDEKTCTLHLLNLKRCDQMELARDF 196
Query: 431 LAEMTRIGVSANRI-TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
+ M G+ + + +++ C +I +AREL+ EM ++ ++V++ +I C
Sbjct: 197 FSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCC 256
Query: 490 ILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVD 549
+ D M + SY L+ F G+ + A R+ M++D +++V+
Sbjct: 257 VKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLV-LMMHDKKLRVE 315
Query: 550 LIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
+N+++ GY R G G P+ TY NG+ A K EA+ N
Sbjct: 316 SYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLN 375
Query: 610 EVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
E++ V + DE + TL++ C R K+LE+VA M +G P
Sbjct: 376 ELR---------------VNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPG 420
Query: 670 KTKFTRI 676
T R+
Sbjct: 421 ATICERL 427
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 235 QLFDEMPQF-GVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
+L +EM GV + +++ ++ C ++ + L VL+ + +++V L + + L+
Sbjct: 231 ELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDG 290
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXX 353
+ +G ++ AE +V M +K+ + +S L+ N ++
Sbjct: 291 FTSYGKVEEAERLVLMMHDKKL----------------RVESYLYNLIMNGYSRFGLVEK 334
Query: 354 XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTT 413
+ + TPN Y LM G K+G+V + + L +R + D Y+T
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE---FEIDEEMYST 391
Query: 414 VVSALVKAGFMDRARQVLAEMTRIG 438
+ + G +D++ +V+AEM R G
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDG 416
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG------ 422
N +Y +++ + K+G++ V + M + P +Y + AL+ G
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 423 --FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+M+ R + +M G+ + N L+KGY L ++ A + +M+ + +P+
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y+ LI G + A +EM+ +G P SY +L+ AFALSG+ A + EM
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLG 564
+ + RV VD I++ LV+ CR G
Sbjct: 386 IENGRV-VDFISYRTLVDESCRKG 408
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
++ SY + L A ++ ++ + N YN ++ + K ++ +A +
Sbjct: 171 ENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIF 230
Query: 467 REM--AEDAEIQPDVVSYNILIDGCILVDDSA--------GALSFFNEMRARGIAPTKIS 516
R M +++ E +P + +Y+IL + +++ S F +M GI P +
Sbjct: 231 RHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFA 290
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXX 576
L+K + LS A R+F +M + + ++ L+ G C G
Sbjct: 291 LNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEM 350
Query: 577 XXNGFHPDVGTYGSFANGIALARKPGEAL-ILWNEVKERWEAGR 619
GF P+ +Y S N AL+ + +A+ LW E E GR
Sbjct: 351 KGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW----EMIENGR 390
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA-GFMDR 426
P+ + Y T++ ++ +++ + + MR + P S ++ AL + G +D
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMR---EIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
++ EM + G + TY L+ G C+ +ID+A++L EM E + P VV+Y LI
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE-KDCAPTVVTYTSLI 234
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+G + A+ + EM+++GI P +Y++LM G+ A +F EM+
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF-EMMMARGC 293
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
+ +++ + L+ G C+ G PD G YG +G K EA
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 607 LWNEV 611
+E+
Sbjct: 354 FLDEM 358
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 25/326 (7%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
I ++ +GY + R D++R+ M+ D P +Y TV++ LV+ ++ A +
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMK---DFDCDPSQKAYVTVLAILVEENQLNLAFKFY 144
Query: 432 AEMTRIGVSANRITYNILLKGYCKQ-LQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
M IG+ + N+L+K C+ +D ++ EM + PD +Y LI G
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG-CDPDSYTYGTLISGLC 203
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
A F EM + APT ++YT+L+ S A R +EM ++ ++
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNV 262
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
++ L++G C+ G G P++ TY + G+ +K EA+ L
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL-- 320
Query: 611 VKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 670
DR N + LKPD GL + + FR+A + M GI PN+
Sbjct: 321 ---------DRMN----LQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 671 TKFTRIYVEMHS---RMFTSKHASRA 693
+ I+V+ + R + + SRA
Sbjct: 368 LTWN-IHVKTSNEVVRGLCANYPSRA 392
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 25/272 (9%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
PD +Y T++S L + G +D A+++ EM + +TY L+ G C +D+A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L EM I+P+V +Y+ L+DG S A+ F M ARG P ++YTTL+
Sbjct: 250 LEEMKSKG-IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD- 584
+ + A + D M N +K D + ++ G+C + G P+
Sbjct: 309 KEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 585 ------VGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLL 638
V T G+ A P A L+ ++ R + + L
Sbjct: 368 LTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR---------------GISVEVETL 411
Query: 639 DTLADICVRAAFFRKALEIVACMEENGIPPNK 670
++L + F+KA+++V + +G P+K
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSK 443
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 149/379 (39%), Gaps = 61/379 (16%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNA-C 224
P KA+ V++ L L L + +R+I P P + N ++ A C
Sbjct: 119 PSQKAYVTVLAILVEENQ----LNLAFKFYKNMREIGLP-------PTVASLNVLIKALC 167
Query: 225 ANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
N G L++F EMP+ G PD+ +Y ++ CR R D + ++E++ +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNS 344
T SL+ ++D A ++ M+ K + N + L+
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE---------------PNVFTYSSLMDGL 272
Query: 345 MNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSAS 404
+++ ++ + PN YTTL+ G K ++ + V +L+ M Q
Sbjct: 273 CKDGRSLQAMELFEM-MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ---GL 328
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD Y V+S A L EM G++ NR+T+NI + + E
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI---------HVKTSNE 379
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
++R + + + A + + MR+RGI+ + +L+K
Sbjct: 380 VVRGLCANY---------------------PSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 525 ALSGQPKLAHRVFDEMVND 543
G+ + A ++ DE+V D
Sbjct: 419 CKKGEFQKAVQLVDEIVTD 437
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 177/400 (44%), Gaps = 43/400 (10%)
Query: 153 ASVVKSMLRSGYL----PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA 208
ASV++++L S L P +A+ V+ LA S L +V L +V+
Sbjct: 53 ASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQ----LENISSVLYHL------EVSE 102
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRK-DL 267
F V+ A SG + +++F ++P F VP A + N ++ + RK + +L
Sbjct: 103 KFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLEL 162
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-----RDLCRILR 322
+ +L + V L +T L+ A G++D A +V+ M + R R+L
Sbjct: 163 VPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLL- 221
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
S K+ S F + Y L ++P R YT +M+ ++
Sbjct: 222 ---SSVCKHKDSSCFDVI---------------GYLEDLRKTRFSPGLRDYTVVMRFLVE 263
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
GR + V +L M+ PD V YT V+ ++ +A ++ E+ +G++ +
Sbjct: 264 GGRGKEVVSVLNQMKCD---RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
TYN+ + G CKQ I+ A +++ M + +P+VV+YNILI + D + A + +
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGS-EPNVVTYNILIKALVKAGDLSRAKTLW 379
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
EM G+ ++ ++ A+ + AH + +E N
Sbjct: 380 KEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 22/320 (6%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+Y + K TP + I+ ++ Y SGR+ + + E + + P + ++
Sbjct: 95 LYHLEVSEKFDTPES-IFRDVIAAYGFSGRIEEAI---EVFFKIPNFRCVPSAYTLNALL 150
Query: 416 SALV-KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
LV K ++ ++L + R+GV T+ IL+ C+ ++D A EL+R M++D+
Sbjct: 151 LVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSV 210
Query: 475 IQPDVVSYNILIDGCILVDDSA-GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
I + +L C D S + + ++R +P YT +M+ G+ K
Sbjct: 211 IVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEV 270
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
V ++M D RV+ DL+ + ++++G G PDV TY + N
Sbjct: 271 VSVLNQMKCD-RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYIN 329
Query: 594 GIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRK 653
G+ AL + + + N S P + L+ L V+A +
Sbjct: 330 GLCKQNDIEGALKMMSSM-----------NKLGSEPNVVTYNILIKAL----VKAGDLSR 374
Query: 654 ALEIVACMEENGIPPNKTKF 673
A + ME NG+ N F
Sbjct: 375 AKTLWKEMETNGVNRNSHTF 394
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 21/305 (6%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y + Y L+ + G V + R+ M +D S PD ++ T+V+ K G++
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEML--EDLVS-PDIYTFNTLVNGYCKLGYVV 172
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A+Q + + + G + TY + G+C++ ++D A ++ +EM ++ + VSY L
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG-CHRNEVSYTQL 231
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G ALS +M+ P +YT L+ A SGQ A +F +M ++
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM-SESG 290
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+K D + +L++ +C NG P+V TY + G + +A+
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAM 349
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 665
L +++ E+ L PD +TL + A +++ MEE+G
Sbjct: 350 GLLSKMLEQ---------------NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Query: 666 IPPNK 670
+ PN+
Sbjct: 395 LVPNQ 399
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A S++ M P+V+ ++ ++ L SG EA+ LF+ ++ + +
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE-----------SGIK 292
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD + ++ + + L + M + G++P+ ++YN ++K C+K+ + +
Sbjct: 293 PDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMG-L 351
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE 312
L ++LEQN+ + T ++L+A G+LD+A ++ M E
Sbjct: 352 LSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 160/404 (39%), Gaps = 22/404 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD+ ++ ++ C G + + M Q G +PD + +++ C + ++
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++++ + SL+ G + A + + E R+ G
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA---FEMLEEMVRN-------------GW 318
Query: 332 K-NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K N L+ + ++ + Y PN YT+++ GY K +++
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ M+ Q P+ +YTT+++ KAG RA +++ M G N TYN +
Sbjct: 379 MLFSRMKEQ---GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
CK+ + +A ELL + A ++ D V+Y ILI +D AL+FF M G
Sbjct: 436 DSLCKKSRAPEAYELLNK-AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
L+ AF + K + R+F +V+ + + ++ YC+ G
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE-TYTSMISCYCKEGDIDLAL 553
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
+G PD TYGS +G+ EA L+ + +R
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 16/255 (6%)
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
G ++ A ++ +M G++ + IT N +L+ + I+ A + EM+ + PD S
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG-VVPDSSS 219
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
Y +++ GC A + M RG P + T ++ A +G A F +M+
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 542 NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
D K +LI + L++G C+ G NG+ P+V T+ + +G+ K
Sbjct: 280 -DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC---KR 335
Query: 602 GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
G W E R R ++ KP+ ++ + +A + + M
Sbjct: 336 G-----WTEKAFRLFLKLVRSDT------YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 662 EENGIPPNKTKFTRI 676
+E G+ PN +T +
Sbjct: 385 KEQGLFPNVNTYTTL 399
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT Y L+ Y ++ +++ + + M+ ++ PD V+Y T++ KAGF+D A
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQ---EAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M G+S + TY++++ K + A +L EM D P++V+YNI++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMD 512
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ AL + +M+ G P K++Y+ +M+ G + A VF EM +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D + +LV+ + + G G P+V T S + K EA L
Sbjct: 573 -DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
H H +YTT+V L +A ++L EM R G N +TYN L+ Y + +++A
Sbjct: 362 HDGH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAG----ALSFFNEMRARGIAPTKISYTTL 520
+ +M E A +PD V+Y LID + AG A+ + M+A G++P +Y+ +
Sbjct: 421 VFNQMQE-AGCKPDRVTYCTLID----IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ +G AH++F EMV D +L+ +N++++ + + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 581 FHPDVGTYGSFANGIALARKPGEALILWNEVKER-WEAGRDRENSDSSVPPLKPDEGLLD 639
F PD TY + EA ++ E++++ W PDE +
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW----------------IPDEPVYG 578
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPN 669
L D+ +A KA + M G+ PN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y TL+ + K+G + + M + M+ S PD +Y+ +++ L KAG + A
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVIINCLGKAGHLPAA 488
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM G + N +TYNI++ + K A +L R+M ++A +PD V+Y+I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVME 547
Query: 488 ---GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
C +++ A + F EM+ + P + Y L+ + +G + A + + M++
Sbjct: 548 VLGHCGYLEE---AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-A 603
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
++ ++ N L+ + R+ G P + TY
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 24/311 (7%)
Query: 225 ANSGDGKMFL---QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVP 281
N G K F +L DEM + G P+ ++YN ++ R + + + V ++ E
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
T +L+ + G LD A + Q M+ G D+ ++
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----------------GLSPDTFTYSVI 475
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N + ++ ++ + TPN Y +M + K+ + +++ M+ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ---N 532
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
+ PD V+Y+ V+ L G+++ A V EM + + Y +L+ + K ++K
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A + + M A ++P+V + N L+ + V+ A A M A G+ P+ +YT L+
Sbjct: 593 AWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 522 KAFALSGQPKL 532
G+ KL
Sbjct: 652 SC-CTDGRSKL 661
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT Y L+ Y ++ +++ + + M+ ++ PD V+Y T++ KAGF+D A
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQ---EAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M G+S + TY++++ K + A +L EM D P++V+YNI++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMD 512
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ AL + +M+ G P K++Y+ +M+ G + A VF EM +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D + +LV+ + + G G P+V T S + K EA L
Sbjct: 573 -DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
H H +YTT+V L +A ++L EM R G N +TYN L+ Y + +++A
Sbjct: 362 HDGH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAG----ALSFFNEMRARGIAPTKISYTTL 520
+ +M E A +PD V+Y LID + AG A+ + M+A G++P +Y+ +
Sbjct: 421 VFNQMQE-AGCKPDRVTYCTLID----IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ +G AH++F EMV D +L+ +N++++ + + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 581 FHPDVGTYGSFANGIALARKPGEALILWNEVKER-WEAGRDRENSDSSVPPLKPDEGLLD 639
F PD TY + EA ++ E++++ W PDE +
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW----------------IPDEPVYG 578
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPN 669
L D+ +A KA + M G+ PN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y TL+ + K+G + + M + M+ S PD +Y+ +++ L KAG + A
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVIINCLGKAGHLPAA 488
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM G + N +TYNI++ + K A +L R+M ++A +PD V+Y+I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVME 547
Query: 488 ---GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
C +++ A + F EM+ + P + Y L+ + +G + A + + M++
Sbjct: 548 VLGHCGYLEE---AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-A 603
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
++ ++ N L+ + R+ G P + TY
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 24/311 (7%)
Query: 225 ANSGDGKMFL---QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVP 281
N G K F +L DEM + G P+ ++YN ++ R + + + V ++ E
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
T +L+ + G LD A + Q M+ G D+ ++
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----------------GLSPDTFTYSVI 475
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N + ++ ++ + TPN Y +M + K+ + +++ M+ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ---N 532
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
+ PD V+Y+ V+ L G+++ A V EM + + Y +L+ + K ++K
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A + + M A ++P+V + N L+ + V+ A A M A G+ P+ +YT L+
Sbjct: 593 AWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 522 KAFALSGQPKL 532
G+ KL
Sbjct: 652 SC-CTDGRSKL 661
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 136/321 (42%), Gaps = 20/321 (6%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLL 268
D +P+ G +N V+N SGD L+ + M + PD ++NI++ CR + DL
Sbjct: 188 DGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLA 247
Query: 269 VFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEY 328
+ + + E+ + + ++L+ ++ G ++ + M E
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIE---------------- 291
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
+G + ++L + + + LL K P+ Y +L++ +
Sbjct: 292 LGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVR 351
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+ M+E + ++ + P ++ TT+V L K+G ++A + +M G+ + +T+N+
Sbjct: 352 AMEMMEELWKKGQT---PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNL 408
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
LL+ C A LR +A +PD +Y++L+ G NEM +
Sbjct: 409 LLRDLCSSDHSTDANR-LRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 509 GIAPTKISYTTLMKAFALSGQ 529
+ P +Y LM + +G+
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGK 488
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 115/279 (41%), Gaps = 34/279 (12%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAM------------------------------- 396
PN +Y T++ GY+KSG + +R + M
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 397 -RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
R + P+ VS+ T++ + +G ++ ++ EM +G + T IL+ G C+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ ++D A L+ ++ + + P Y L++ + + A+ E+ +G P I
Sbjct: 311 EGRVDDACGLVLDLL-NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
+ TTL++ SG+ + A ++M+N + D + +N+L+ C
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMN-AGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G+ PD TY +G + E +L NE+ ++
Sbjct: 429 ASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
I+ + + Y ++ ++ + + M+R D P+ Y TVV+ VK+G MD+A +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
M + + T+NIL+ GYC+ + D A +L REM E +P+VVS+N LI G +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG-CEPNVVSFNTLIRGFLS 275
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+ EM G ++ + L+ G+ A + +++N RV
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK-RVLPSEF 334
Query: 552 AWNMLVEGYC 561
+ LVE C
Sbjct: 335 DYGSLVEKLC 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 53/334 (15%)
Query: 260 CRKDRKD--LLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDL 317
CR + D LL F + L P + +++V YV GD+D A Q M ++R
Sbjct: 168 CRARKMDYALLAFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKER--- 223
Query: 318 CRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLM 377
K D +L N +S + K PN + TL+
Sbjct: 224 -------------AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 378 KGYMKSGRVSDTVRMLEAM----------------------RRQDDSASH---------- 405
+G++ SG++ + V+M M R DD+
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P Y ++V L RA +++ E+ + G + I L++G K + +KA
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+ +M +A I PD V++N+L+ D S A ++G P + +Y L+ F
Sbjct: 391 MEKMM-NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
G+ K + +EM+ D + D+ +N L++G
Sbjct: 450 KEGRRKEGEVLVNEML-DKDMLPDIFTYNRLMDG 482
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT Y L+ Y ++ +++ + + M+ ++ PD V+Y T++ KAGF+D A
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQ---EAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M G+S + TY++++ K + A +L EM D P++V+YNI++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMD 512
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ AL + +M+ G P K++Y+ +M+ G + A VF EM +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D + +LV+ + + G G P+V T S + K EA L
Sbjct: 573 -DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
H H +YTT+V L +A ++L EM R G N +TYN L+ Y + +++A
Sbjct: 362 HDGH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAG----ALSFFNEMRARGIAPTKISYTTL 520
+ +M E A +PD V+Y LID + AG A+ + M+A G++P +Y+ +
Sbjct: 421 VFNQMQE-AGCKPDRVTYCTLID----IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ +G AH++F EMV D +L+ +N++++ + + G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 581 FHPDVGTYGSFANGIALARKPGEALILWNEVKER-WEAGRDRENSDSSVPPLKPDEGLLD 639
F PD TY + EA ++ E++++ W PDE +
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW----------------IPDEPVYG 578
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPN 669
L D+ +A KA + M G+ PN
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y TL+ + K+G + + M + M+ S PD +Y+ +++ L KAG + A
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVIINCLGKAGHLPAA 488
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM G + N +TYNI++ + K A +L R+M ++A +PD V+Y+I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVME 547
Query: 488 ---GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
C +++ A + F EM+ + P + Y L+ + +G + A + + M++
Sbjct: 548 VLGHCGYLEE---AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-A 603
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
++ ++ N L+ + R+ G P + TY
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 24/311 (7%)
Query: 225 ANSGDGKMFL---QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVP 281
N G K F +L DEM + G P+ ++YN ++ R + + + V ++ E
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
T +L+ + G LD A + Q M+ G D+ ++
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG----------------GLSPDTFTYSVI 475
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N + ++ ++ + TPN Y +M + K+ + +++ M+ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ---N 532
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
+ PD V+Y+ V+ L G+++ A V EM + + Y +L+ + K ++K
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A + + M A ++P+V + N L+ + V+ A A M A G+ P+ +YT L+
Sbjct: 593 AWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 522 KAFALSGQPKL 532
G+ KL
Sbjct: 652 SC-CTDGRSKL 661
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 184/449 (40%), Gaps = 39/449 (8%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
V K M GY+ +V ++ V+ EAL +F R L+ P+V +
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF---YRMLKCGVWPNVVS------ 255
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFG---VVPDALSYNIVMKLCCRKDRKDLLVFV 271
FN +++ +GD + LQL +M V P+A++YN V+ C+ R DL +
Sbjct: 256 --FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+++ V T +LV AY G D A + M K + ++ S ++
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ D + MN K + +++G ++G V + V
Sbjct: 374 EGDIEGAMSVLRDMN----------------SKNMQIDRFTQAIVVRGLCRNGYVKEAV- 416
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
E R+ + D V + T++ V+ + A Q+L M G+S + I++ L+
Sbjct: 417 --EFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY K+ ++++A E+ M + + ++V YN +++G + A + N M + I
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNK-TSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI- 532
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMV-NDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
++Y TL+ +G + A + +M D V L+ +N+++ C+ G
Sbjct: 533 ---VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAK 589
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALAR 599
G PD TYG+ + R
Sbjct: 590 EVLKFMVERGVVPDSITYGTLITSFSKHR 618
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 2/242 (0%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN + ++ G K+G + +++L M + P+ V+Y +V++ KAG +D A
Sbjct: 251 PNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ +M + GV N TY L+ Y + D+A L EM + V+ YN ++
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI-YNSIVY 369
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ D GA+S +M ++ + + + +++ +G K A F +++ ++
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVE-FQRQISEKKLV 428
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D++ N L+ + R G D ++G+ +G K AL +
Sbjct: 429 EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEI 488
Query: 608 WN 609
++
Sbjct: 489 YD 490
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ +L++ ++G ++E R + S + + L+ +DR +V
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVH---ALNNFMGCLLNVNEIDRFWKVY 206
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
EM +G N T+N+++ +CK+ ++ +A + M + + P+VVS+N++IDG
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLK-CGVWPNVVSFNMMIDGACK 265
Query: 492 VDDSAGALSFFNE---MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
D AL + M ++P ++Y +++ F +G+ LA R+ +MV V
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG-VDC 324
Query: 549 DLIAWNMLVEGYCRLG 564
+ + LV+ Y R G
Sbjct: 325 NERTYGALVDAYGRAG 340
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 39/339 (11%)
Query: 225 ANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
A +G+ + + +FD + +FG+ + S N+++ C++ R + VL + L+ ++
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNA 224
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES-------NSEYIGGKNDSVF 337
T + + + ++ A +Q M+ C I + E+I V+
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI-----KVY 279
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
+ L N S PN+ YTT+M + +R+ M+
Sbjct: 280 EMLSEMEANGS------------------PPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL-AEMTRIGVSANRITYNILLKGYCKQ 456
R S PD + Y ++ L +AG ++ A +V EM +GVS N TYN ++ YC
Sbjct: 322 R---SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR-GIAPTKI 515
+ DKA ELL+EM PDV +Y L+ C D EM + ++ +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVND---PRVKVDLI 551
+YT L++ + + A+ +F+EM++ PR + L+
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLL 477
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
NT L+ K RV +L ++ S P+ ++ + KA ++ A
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLK----SHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+ EM G I+Y +++ YC+Q + K E+L EM + P+ ++Y ++
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS-PPNSITYTTIMSS 303
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ AL M+ G P + Y L+ A +G+ + A RVF + + V +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 549 DLIAWNMLVEGYCRLGXX-XXXXXXXXXXXXNGFHPDVGTY 588
+ +N ++ YC N +PDV TY
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 39/339 (11%)
Query: 225 ANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
A +G+ + + +FD + +FG+ + S N+++ C++ R + VL + L+ ++
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNA 224
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRES-------NSEYIGGKNDSVF 337
T + + + ++ A +Q M+ C I + E+I V+
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI-----KVY 279
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
+ L N S PN+ YTT+M + +R+ M+
Sbjct: 280 EMLSEMEANGS------------------PPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL-AEMTRIGVSANRITYNILLKGYCKQ 456
R S PD + Y ++ L +AG ++ A +V EM +GVS N TYN ++ YC
Sbjct: 322 R---SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR-GIAPTKI 515
+ DKA ELL+EM PDV +Y L+ C D EM + ++ +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVND---PRVKVDLI 551
+YT L++ + + A+ +F+EM++ PR + L+
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLL 477
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
NT L+ K RV +L ++ S P+ ++ + KA ++ A
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLK----SHITPNAHTFNIFIHGWCKANRVEEAL 244
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+ EM G I+Y +++ YC+Q + K E+L EM + P+ ++Y ++
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS-PPNSITYTTIMSS 303
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
+ AL M+ G P + Y L+ A +G+ + A RVF + + V +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 549 DLIAWNMLVEGYCRLGXX-XXXXXXXXXXXXNGFHPDVGTY 588
+ +N ++ YC N +PDV TY
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 69/440 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAW----------------SAVVSRLASSGDSVEALGLFRAVT 195
A +V K++ +G+ P + ++ S++VS + SG ++++ F AV
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI-FFNAVI 122
Query: 196 RRLRKITDPDVAADS---------RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFG-- 244
+ + + A + P T +N ++ +G + +L D M + G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 245 -VVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
V P+ ++N++++ C+K + + V++++ E V T +++ YV G+ A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 304 EI-IVQAM---------------------REKR-RDLCRILRESNSEYIGGKNDSVFQKL 340
E +V+ M RE R RD R +R + N VF L
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA-NLVVFNSL 301
Query: 341 LPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQD 400
+ N + LL + + G V++L M+ +
Sbjct: 302 I-NGFVEVMDRDGIDEVTLTLLLMSFNEEVELV----------GNQKMKVQVLTLMKECN 350
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
A D ++Y+TV++A AG+M++A QV EM + GV + Y+IL KGY + +
Sbjct: 351 VKA---DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Query: 461 KARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
KA ELL + E +P+VV + +I G A+ FN+M G++P ++ TL
Sbjct: 408 KAEELLETLI--VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 465
Query: 521 MKAFALSGQPKLAHRVFDEM 540
M + QP A V M
Sbjct: 466 MWGYLEVKQPWKAEEVLQMM 485
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 366 YTPNTRIYTTLMKGYM---KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG 422
+ P+ YTTL+ + G +S V +E S + D + + V++A ++G
Sbjct: 76 HRPSLISYTTLLAAMTVQKQYGSISSIVSEVE------QSGTKLDSIFFNAVINAFSESG 129
Query: 423 FMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA--EIQPDVV 480
M+ A Q L +M +G++ TYN L+KGY + +++ ELL M E+ ++ P++
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH-RVFDE 539
++N+L+ A +M G+ P ++Y T+ + G+ A V ++
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLG 564
MV + K + ++V GYCR G
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREG 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 34/325 (10%)
Query: 211 RPDTGAFNAVLNACANSGDG-KMFLQLFDEMP-QFGVVPDALSYNIVMKLCCRKDR-KDL 267
RPDT +N + G+ + ++ ++M + P+ + IV+ CR+ R +D
Sbjct: 220 RPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG 279
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLD-----TAEIIVQAMREK--------- 313
L FV R+ E V + +SL+ +V+ D D T +++ + E+
Sbjct: 280 LRFV-RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKM 338
Query: 314 RRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
+ + +++E N K D + + N+ + + ++ P+ Y
Sbjct: 339 KVQVLTLMKECNV-----KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
+ L KGY+++ +LE + + S P+ V +TTV+S G MD A +V +
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVE----SRPNVVIFTTVISGWCSNGSMDDAMRVFNK 449
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG---CI 490
M + GVS N T+ L+ GY + Q KA E+L +M ++P+ ++ +L +
Sbjct: 450 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL-QMMRGCGVKPENSTFLLLAEAWRVAG 508
Query: 491 LVDDSAGALSFFNEMRARGIAPTKI 515
L D+S A+ N ++ + I K+
Sbjct: 509 LTDESNKAI---NALKCKDIEIAKL 530
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 50/422 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
AA++ ML+SG ++ ++ + G EA L L+K+ + ++
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL-------LKKMEEKGIS---- 372
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK-LCCRKDRKDLLVF 270
PDT +N +L+ A++GD + L+ + ++ + G+ PD +++ V+ LC RK ++
Sbjct: 373 PDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAV 432
Query: 271 VLE------RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQA--MREKRRDLCRILR 322
+ E RI E +VP+ M YV+ G ++VQA + E+ + C +
Sbjct: 433 IAEMDRNSIRIDEHSVPVIMQM-------YVNEG------LVVQAKALFERFQLDCVL-- 477
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
+ + ++ + V+ + Y ++K Y K
Sbjct: 478 ----------SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
+ + + + M+ Q + PD +Y ++ L +D A+++LAEM G
Sbjct: 528 AKLHEKALSLFKGMKNQ---GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG 584
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
TY ++ Y + + A +L M E ++P+ V Y LI+G A+ +F
Sbjct: 585 CKTYAAMIASYVRLGLLSDAVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
M G+ I T+L+KA++ G + A RV+D+M D D+ A N ++
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM-KDSEGGPDVAASNSMLSLCAD 702
Query: 563 LG 564
LG
Sbjct: 703 LG 704
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/495 (20%), Positives = 199/495 (40%), Gaps = 48/495 (9%)
Query: 207 AADSRPD----TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK 262
+DS P T FN +++ +G LF EM + GV D +++N ++ C
Sbjct: 294 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH 353
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE--------KR 314
+L+++ E+ + T + L++ + D GD++ A + +R+
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH 413
Query: 315 RDLCRILRESNSEYIGGKNDSVFQKLLPNSMN---------QSXXXXXXXVYQPPLLPKP 365
R + IL + + + ++V ++ NS+ V Q L +
Sbjct: 414 RAVLHILCQRK---MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER 470
Query: 366 YTPNTRIYTTLMKG----YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
+ + + +T + Y + G + + R S D + Y ++ A KA
Sbjct: 471 FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM--SGQRNDVLEYNVMIKAYGKA 528
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
++A + M G + TYN L + +D+A+ +L EM D+ +P +
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKT 587
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
Y +I + + + A+ + M G+ P ++ Y +L+ FA SG + A + F M+
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMM 646
Query: 542 NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
+ V+ + I L++ Y ++G + PDV S + A
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 602 GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
EA ++N ++E+ G S +++ L G+LD +A+E+ M
Sbjct: 707 SEAESIFNALREK---GTCDVISFATMMYLYKGMGMLD-------------EAIEVAEEM 750
Query: 662 EENGIPPNKTKFTRI 676
E+G+ + T F ++
Sbjct: 751 RESGLLSDCTSFNQV 765
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 147/382 (38%), Gaps = 74/382 (19%)
Query: 172 SAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGK 231
+AV+ A G VEA +F R + + R D +N ++ A + +
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYG-KRNM---------SGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 232 MFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLV 291
L LF M G PD +YN + ++ D D +L +L+ T +++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 292 AAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXX 351
A+YV G L A + +AM E G K
Sbjct: 593 ASYVRLGLLSDAVDLYEAM----------------EKTGVK------------------- 617
Query: 352 XXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSY 411
PN +Y +L+ G+ +SG V + ++ R ++ +H+
Sbjct: 618 ----------------PNEVVYGSLINGFAESGMVEEAIQYF---RMMEEHGVQSNHIVL 658
Query: 412 TTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI-DKARELLREMA 470
T+++ A K G ++ AR+V +M + N +L C L I +A + +
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALR 717
Query: 471 EDAEIQPDVVSYNILI---DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALS 527
E DV+S+ ++ G ++D+ A+ EMR G+ S+ +M +A
Sbjct: 718 EKGTC--DVISFATMMYLYKGMGMLDE---AIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 528 GQPKLAHRVFDEMVNDPRVKVD 549
GQ +F EM+ + ++ +D
Sbjct: 773 GQLSECCELFHEMLVERKLLLD 794
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 3/238 (1%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L + P +YT+L+ Y KS + LE M+ D PD ++T ++S K
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDC--KPDVFTFTVLISCCCK 227
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G D + ++ EM+ +GV + +TYN ++ GY K ++ +L +M ED + PDV
Sbjct: 228 LGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVC 287
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+ N +I + S+++ + G+ P ++ L+ +F +G K V D M
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALA 598
+ + +N+++E + + G G P+ TY S N + A
Sbjct: 348 -EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 404
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 40/299 (13%)
Query: 247 PDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEII 306
PD ++ +++ CC+ R DL+ ++ + V T ++++ Y G + E +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 307 VQAMREKRR---DLCRILRESNSEYIGGKN----DSVFQKLLPNSMNQSXXXXXXXVYQP 359
+ M E D+C L Y G+N +S + + +
Sbjct: 273 LADMIEDGDSLPDVCT-LNSIIGSYGNGRNMRKMESWYSRFQLMGVQ------------- 318
Query: 360 PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALV 419
P+ + L+ + K+G +++ M ++ S + V+Y V+
Sbjct: 319 --------PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT---VTYNIVIETFG 367
Query: 420 KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDV 479
KAG +++ V +M GV N ITY L+ Y K + K +LR++ ++++ D
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV-NSDVVLDT 426
Query: 480 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD 538
+N +I+ D A + +M R P KI++ T++K + AH +FD
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYT-------AHGIFD 478
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 2/208 (0%)
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
+K R +++ +R+Q P +YT + L D+A + M G+
Sbjct: 119 IKENRWQSALKIFNLLRKQH--WYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLK 176
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
Y L+ Y K +DKA L M ++ +PDV ++ +LI C + S
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
EM G+ + ++Y T++ + +G + V +M+ D D+ N ++ Y
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 561 CRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
G PD+ T+
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTF 324
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 146/354 (41%), Gaps = 61/354 (17%)
Query: 189 GLFRAVTRRLRKITDPDVAADSRPDTGA-FNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
G ++A+ R + ++ D P T FN ++ C +G + ++ F + F P
Sbjct: 166 GEYKAMCRLI-----DEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRP 220
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
SYN ++ + L+ +V E++LE D+ T I++
Sbjct: 221 YKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFT----------------PDVLTYNIVM 264
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
A + GK D +++ L ++ ++
Sbjct: 265 FA-----------------NFRLGKTDRLYRLL------------------DEMVKDGFS 289
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y L+ + + +L MR + P + +TT++ L +AG ++
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMR---EVGVEPGVIHFTTLIDGLSRAGKLEAC 346
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ + E ++G + + + Y +++ GY +++KA E+ +EM E ++ P+V +YN +I
Sbjct: 347 KYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL-PNVFTYNSMIR 405
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
G + A + EM +RG P + Y+TL+ +G+ AH V +MV
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P SY ++ +L+ V +M G + + +TYNI++ + + D+ L
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L EM +D PD+ +YNIL+ + AL+ N MR G+ P I +TTL+ +
Sbjct: 280 LDEMVKDG-FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+G+ + DE V D++ + +++ GY G G P+V
Sbjct: 339 RAGKLEACKYFMDETVK-VGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 586 GTYGSFANGIALARKPGEALILWNEVKER 614
TY S G +A K EA L E++ R
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESR 426
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 133/319 (41%), Gaps = 30/319 (9%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
++ M++ GY ++ ++ + G++ GL R V + K + RP
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEA----GLARDVVEQFIK----SKTFNYRPYK 222
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
++NA+L++ K+ ++++M + G PD L+YNIVM R + D L +L+
Sbjct: 223 HSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDE 282
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+++ DL T I++ + + L + ++ +G +
Sbjct: 283 MVKDGFS----------------PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+ L + ++++ + + TP+ YT ++ GY+ G + M +
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
M + P+ +Y +++ AG A +L EM G + N + Y+ L+
Sbjct: 387 EM---TEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 443
Query: 455 KQLQIDKARELLREMAEDA 473
++ +A E++++M E
Sbjct: 444 NAGKVLEAHEVVKDMVEKG 462
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
Y++L+K + + + L+ EM +D ++N+LI C + + F +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDG-YPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
+ P K SY ++ + Q KL V+++M+ D D++ +N+++ RLG
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTP-DVLTYNIVMFANFRLGK 272
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
+GF PD+ TY + +A KP AL L N ++E
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE 320
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 27/313 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMR--RQDD-SASHPDHVSYTTVVSALVKAGFM 424
P+ L+ KS RV + + + E MR R DD + D + + T++ L K G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 425 DRARQVLAEMT-RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
A ++L M + N +TYN L+ GYC+ +++ A+E++ M ED EI+P+VV+ N
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVN 445
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN- 542
++ G A+ FF +M G+ ++Y TL+ A + A +++M+
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 543 --DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
P K+ + L+ G C++ GF D+ Y G+ +
Sbjct: 506 GCSPDAKI----YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDK- 559
Query: 601 PGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVAC 660
N ++ +E D E KPD +TL + F ++
Sbjct: 560 --------NNTEKVYEMLTDMEKEGK-----KPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 661 MEENGIPPNKTKF 673
M E+G+ P T +
Sbjct: 607 MREDGLDPTVTTY 619
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 168/412 (40%), Gaps = 29/412 (7%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEM----PQFGVV--PDALSYNIVMKLCCRKDR 264
RPD ++N S L++F++M G V D++ +N ++ C+ R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 265 -KDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRE 323
K+ ++ LE+ T + L+ Y G L+TA+ +V M+E
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI-------- 437
Query: 324 SNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
K + V + M + V+ + + N Y TL+
Sbjct: 438 --------KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
V + E M ++ PD Y ++S L + A +V+ ++ G S +
Sbjct: 490 SNVEKAMYWYEKML---EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
+ YN+L+ +C + +K E+L +M ++ + +PD ++YN LI D
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMME 605
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRL 563
+MR G+ PT +Y ++ A+ G+ A ++F +M +V + + +N+L+ + +L
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 564 GXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI-LWNEVKER 614
G P+V TY + + + GE L+ L +E+ E+
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLN-EKTQGETLLKLMDEMVEQ 716
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 145/362 (40%), Gaps = 24/362 (6%)
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILR 322
D +D L+ + E E+N+PL + + L+ + G ++ + ++ + +
Sbjct: 131 DPRDKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERL------------ 178
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
+SN KN V ++ + V L + P RI ++ +
Sbjct: 179 DSNM-----KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVW 233
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
GR+ +++ + R P+ V T +S+L K + A +L+++ +
Sbjct: 234 KGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLE 293
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
+N LL + + I + +L+ +M E +I+PDVV+ ILI+ AL F
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDE-VKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 503 NEMRARG------IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
+MR + I I + TL+ G+ K A + M + R + + +N L
Sbjct: 353 EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCL 412
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWE 616
++GYCR G + P+V T + G+ A++ + ++++
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 617 AG 618
G
Sbjct: 473 KG 474
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 27/313 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMR--RQDD-SASHPDHVSYTTVVSALVKAGFM 424
P+ L+ KS RV + + + E MR R DD + D + + T++ L K G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 425 DRARQVLAEMT-RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
A ++L M N +TYN L+ GYC+ +++ A+E++ M ED EI+P+VV+ N
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVN 445
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN- 542
++ G A+ FF +M G+ ++Y TL+ A + A +++M+
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 543 --DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
P K+ + L+ G C++ GF D+ Y G+ +
Sbjct: 506 GCSPDAKI----YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDKN 560
Query: 601 PGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVAC 660
E + +E D E KPD +TL + F ++
Sbjct: 561 NAEKV---------YEMLTDMEKEGK-----KPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 661 MEENGIPPNKTKF 673
M E+G+ P T +
Sbjct: 607 MREDGLDPTVTTY 619
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 176/424 (41%), Gaps = 43/424 (10%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEM----PQFGVV--PDALSYNIVMKLCCR--- 261
RPD ++N S L++F++M G V D++ +N ++ C+
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 262 -KDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRI 320
K+ ++LLV + ++ E+ VP +T + L+ Y G L+TA+ +V M+E
Sbjct: 386 LKEAEELLVRM--KLEERCVPNAVT-YNCLIDGYCRAGKLETAKEVVSRMKEDEI----- 437
Query: 321 LRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
K + V + M + V+ + + N Y TL+
Sbjct: 438 -----------KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
V + E M ++ PD Y ++S L + A +V+ ++ G S
Sbjct: 487 CSVSNVEKAMYWYEKML---EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
+ + YN+L+ +C + +K E+L +M ++ + +PD ++YN LI D
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVER 602
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+MR G+ PT +Y ++ A+ G+ A ++F +M +V + + +N+L+ +
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 561 CRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI---------LWNEV 611
+LG P+V TY + + + GE L+ L N++
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN-EKTQGETLLKLMDEMVEHLVNQI 721
Query: 612 KERW 615
+ +W
Sbjct: 722 RSQW 725
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 143/362 (39%), Gaps = 24/362 (6%)
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILR 322
D +D L+ + E E+N+PL + L+ + G ++ + ++ + +
Sbjct: 131 DPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL------------ 178
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
+SN KN V ++ + V L + P RI ++ +
Sbjct: 179 DSNM-----KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVW 233
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
R+ +++ + R P+ V T +S+L K + A +L+++ +
Sbjct: 234 KERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLE 293
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
+N LL + + I + +L+ +M E +I+PDVV+ ILI+ AL F
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDE-VKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 503 NEMRARG------IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
+MR + I I + TL+ G+ K A + M + R + + +N L
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWE 616
++GYCR G + P+V T + G+ A++ + ++++
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 617 AG 618
G
Sbjct: 473 KG 474
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 162/378 (42%), Gaps = 24/378 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
R D + ++ G + LF+EM G+ + + YN +M++ + D +
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
V R++E T L+ V G L + +V+ + R + + Y
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK-------RYMTQGIYSY-- 377
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
L ++++ + P Y ++++ +G+ T+
Sbjct: 378 ----------LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK---TI 424
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+E + + + D + Y TV SAL K + + +M + G S + TYNIL+
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
+ + ++D+A + E+ E ++ +PD++SYN LI+ D A F EM+ +G+
Sbjct: 485 ASFGRVGEVDEAINIFEEL-ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
P ++Y+TLM+ F + + ++A+ +F+EM+ + +++ +N+L++ + G
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG-CQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 571 XXXXXXXXNGFHPDVGTY 588
G PD TY
Sbjct: 603 DLYSKMKQQGLTPDSITY 620
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 167/377 (44%), Gaps = 37/377 (9%)
Query: 170 AWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGD 229
++ ++ + G EA+GLF + + + +N ++ A
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEM-----------ITEGLTLNVVGYNTLMQVLAK--- 317
Query: 230 GKMF---LQLFDEMPQFGVVPDALSYNIVMKLCCRKD---RKDLLVFVLERILEQNV-PL 282
GKM +Q+F M + G P+ +Y++++ L + R D +V + +R + Q +
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY 377
Query: 283 CMTTL---------HSLVAAYVDF---GDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ TL H L F G+ D+ +++++ + + I S G
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
D++ + +++ + + +P+ Y L+ + + G V + +
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ E + R D PD +SY ++++ L K G +D A EM G++ + +TY+ L+
Sbjct: 498 NIFEELERSD---CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
+ + K +++ A L EM QP++V+YNIL+D +A A+ +++M+ +G+
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKG-CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 511 APTKISYTTLMKAFALS 527
P I+YT L + ++S
Sbjct: 614 TPDSITYTVLERLQSVS 630
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 108/273 (39%), Gaps = 35/273 (12%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
YT +++ + G+ + V + M + + + V Y T++ L K +D+A QV +
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTL---NVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQI---DKAREL----------------LREMAEDA 473
M G N TY++LL + Q+ D E+ L ++ +
Sbjct: 330 RMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVS 389
Query: 474 E------------IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
E ++ + SY +++ + A+ +++ +G+ + Y T+
Sbjct: 390 EAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVF 449
Query: 522 KAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
A Q H +F++M D D+ +N+L+ + R+G +
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGP-SPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKER 614
PD+ +Y S N + EA + + E++E+
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 27/313 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMR--RQDD-SASHPDHVSYTTVVSALVKAGFM 424
P+ L+ KS RV + + + E MR R DD + D + + T++ L K G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 425 DRARQVLAEMT-RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
A ++L M N +TYN L+ GYC+ +++ A+E++ M ED EI+P+VV+ N
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVN 445
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN- 542
++ G A+ FF +M G+ ++Y TL+ A + A +++M+
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 543 --DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
P K+ + L+ G C++ GF D+ Y G+ +
Sbjct: 506 GCSPDAKI----YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDKN 560
Query: 601 PGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVAC 660
E + +E D E KPD +TL + F ++
Sbjct: 561 NAEKV---------YEMLTDMEKEGK-----KPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 661 MEENGIPPNKTKF 673
M E+G+ P T +
Sbjct: 607 MREDGLDPTVTTY 619
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 175/415 (42%), Gaps = 35/415 (8%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEM----PQFGVV--PDALSYNIVMKLCCR--- 261
RPD ++N S L++F++M G V D++ +N ++ C+
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 262 -KDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRI 320
K+ ++LLV + ++ E+ VP +T + L+ Y G L+TA+ +V M+E
Sbjct: 386 LKEAEELLVRM--KLEERCVPNAVT-YNCLIDGYCRAGKLETAKEVVSRMKEDEI----- 437
Query: 321 LRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
K + V + M + V+ + + N Y TL+
Sbjct: 438 -----------KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
V + E M ++ PD Y ++S L + A +V+ ++ G S
Sbjct: 487 CSVSNVEKAMYWYEKML---EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALS 500
+ + YN+L+ +C + +K E+L +M ++ + +PD ++YN LI D
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVER 602
Query: 501 FFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+MR G+ PT +Y ++ A+ G+ A ++F +M +V + + +N+L+ +
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 561 CRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI-LWNEVKER 614
+LG P+V TY + + + GE L+ L +E+ E+
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN-EKTQGETLLKLMDEMVEQ 716
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 143/362 (39%), Gaps = 24/362 (6%)
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILR 322
D +D L+ + E E+N+PL + L+ + G ++ + ++ + +
Sbjct: 131 DPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL------------ 178
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
+SN KN V ++ + V L + P RI ++ +
Sbjct: 179 DSNM-----KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVW 233
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
R+ +++ + R P+ V T +S+L K + A +L+++ +
Sbjct: 234 KERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLE 293
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
+N LL + + I + +L+ +M E +I+PDVV+ ILI+ AL F
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDE-VKIRPDVVTLGILINTLCKSRRVDEALEVF 352
Query: 503 NEMRARG------IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
+MR + I I + TL+ G+ K A + M + R + + +N L
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCL 412
Query: 557 VEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWE 616
++GYCR G + P+V T + G+ A++ + ++++
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 617 AG 618
G
Sbjct: 473 KG 474
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 29/323 (8%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
N ++ G K +F + +FG P+A +Y + ++ C++ D V E++L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLC-RILRESNSEYIGGKNDS 335
+ V + +++ + G + A + + + K + L R + + KND
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALC--KNDG 351
Query: 336 VF---QKLLPN------------------SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYT 374
Q++L + S+ + ++ K P ++
Sbjct: 352 TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN 411
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
++ K+G + + +L+ M + PD +YT ++S K G MD A+++LAE
Sbjct: 412 LVVHACSKTGDLDEAKEVLKLMESR---GLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG-CILVD 493
+ + +TY+ L++GYCK + D+A +LL EM + +QP+ YN LI C+
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM-DRFGVQPNADEYNKLIQSFCLKAL 527
Query: 494 DSAGALSFFNEMRARGIAPTKIS 516
D A F EM+ +G+ IS
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAIS 550
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 99/237 (41%), Gaps = 7/237 (2%)
Query: 380 YMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA-GFMDRARQVLAEMTRIG 438
+ K G+ + + E + ++ S P V+ T+++AL K G + A+++L +++
Sbjct: 311 FCKEGKAEEAYSVYELAKTKEKSLP-PRFVA--TLITALCKNDGTITFAQEMLGDLSGEA 367
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
++ ++ C+ + A+ LL +M + V +N+++ C D A
Sbjct: 368 RRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV-FNLVVHACSKTGDLDEA 426
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
M +RG+ P +YT ++ +A G A + E + K+ + ++ L+
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK-KLSPVTYHALIR 485
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE-ALILWNEVKER 614
GYC++ G P+ Y L E A +L+ E+K++
Sbjct: 486 GYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+TP+++ Y+ L++G+ G+ + + E R D+ HPD V+Y+ +V L KAG +D
Sbjct: 233 FTPDSKTYSILLEGW---GKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A ++ M Y++L+ Y + ++++A + EM E + ++ DV +N L
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM-ERSGMKADVAVFNSL 348
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN--D 543
I + EM+++G+ P S +++ G+ A VF +M+ +
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 408
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
P D + M+++ +C G P + T+ NG+ R +
Sbjct: 409 P----DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 604 ALILWNEVKE 613
A +L E+ E
Sbjct: 465 ACVLLEEMIE 474
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N + +M+ Y ++ +V + + M + D P+ V++ ++SAL K+ + +A+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYD---LPPNLVAFNGLLSALCKSKNVRKAQ 223
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+V M R + + TY+ILL+G+ K+ + KARE+ REM DA PD+V+Y+I++D
Sbjct: 224 EVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDI 281
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
AL M PT Y+ L+ + + + A F EM +K
Sbjct: 282 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG-MKA 340
Query: 549 DLIAWNMLVEGYCR 562
D+ +N L+ +C+
Sbjct: 341 DVAVFNSLIGAFCK 354
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 145/340 (42%), Gaps = 36/340 (10%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P++ A++ ++S L S + +A +F + R PD+ ++ +L
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT------------PDSKTYSILLEGWG 248
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
+ ++F EM G PD ++Y+I++ + C+ R D + ++ R ++ ++ T
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV-RSMDPSICKPTT 307
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND-SVFQKLLPNS 344
++S++ +G + E V E R G K D +VF L+
Sbjct: 308 FIYSVLVH--TYGTENRLEEAVDTFLEMERS-------------GMKADVAVFNSLIGAF 352
Query: 345 MNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSAS 404
+ V + + K TPN++ +++ ++ G + + M +
Sbjct: 353 CKANRMKNVYRVLK-EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK----VC 407
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD +YT V+ + M+ A +V M + GV + T+++L+ G C++ KA
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
LL EM E I+P V++ L ++ ++ L F NE
Sbjct: 468 LLEEMIEMG-IRPSGVTFGRL-RQLLIKEEREDVLKFLNE 505
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 182/467 (38%), Gaps = 53/467 (11%)
Query: 98 RLVSQLSYHNTLPSLTRAQSILTRLRNERQLHRLDANSXXXXXXXXXXXXHTLYAASVVK 157
+LV ++ HN +P +++ L QL + A +++
Sbjct: 125 KLVEVMARHNQVPHFPSCSNLVRGLARIDQLDK---------------------AMCILR 163
Query: 158 SMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAF 217
M+ SG +P ++ ++ L G AL L ++ + S PD +
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS-----------LSGSPPDVITY 212
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
N V+ + G+ + ++ + + Q G P ++Y ++++L CR + VLE +
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVF 337
+ + T +SLV G+L+ ++Q + +L + +++
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTV-----------TYNTLL 321
Query: 338 QKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMR 397
L + +YQ Y P Y L+ G K+ +S + M
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQ-----TSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
Q PD V+Y TV+ A+ K G +D A ++L + ITYN ++ G K+
Sbjct: 377 EQ---KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+ KA EL +M DA I PD ++ LI G + A E RG +Y
Sbjct: 434 LMKKALELYHQML-DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+++ + ++A V + M+ K D + +V+G +G
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGG-CKPDETIYTAIVKGVEEMG 538
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 167/437 (38%), Gaps = 71/437 (16%)
Query: 240 MPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGD 299
M G VPD ++YN+++ C+K + +LE + P + T ++++ D+G+
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 300 LDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQP 359
AE ++ +++ ++ C P
Sbjct: 225 ---AEQAIRFWKDQLQNGC----------------------------------------P 241
Query: 360 PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALV 419
P + YT L++ R + R +E + +PD V+Y ++V+
Sbjct: 242 PFMIT--------YTVLVE---LVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 420 KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDV 479
+ G ++ V+ + G+ N +TYN LL C D+ E+L M + + P V
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC-PTV 349
Query: 480 VSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
++YNILI+G + A+ FF +M + P ++Y T++ A + G A +
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG- 408
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALAR 599
++ + LI +N +++G + G G PD T S G A
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 600 KPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
EA + E R R S L + +C + A+E+V
Sbjct: 469 LVEEAGQVLKETSNRGNGIR------GSTYRL--------VIQGLCKKKE-IEMAIEVVE 513
Query: 660 CMEENGIPPNKTKFTRI 676
M G P++T +T I
Sbjct: 514 IMLTGGCKPDETIYTAI 530
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 7/254 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y NT Y L++G G ++ +++ +E + ++ + P+ +Y+ ++ A K D
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA---PNAFTYSFLLEAAYKERGTD 228
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A ++L E+ G N ++YN+LL G+CK+ + D A L RE+ + +VVSYNIL
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG-FKANVVSYNIL 287
Query: 486 IDGCILVDDS-AGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV-ND 543
+ C+ D A S EM AP+ ++Y L+ + A G+ + A +V EM +
Sbjct: 288 LR-CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
+ +V ++N ++ C+ G P+ GTY + + K E
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 604 ALILWNEVKERWEA 617
A + + + +
Sbjct: 407 AFYIIQSLSNKQKC 420
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
L+ + PN T L+ K+ R+ +R++E M S PD +YT +V+ L K
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMV---SSGIIPDASAYTYLVNQLCK 153
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G + A Q++ +M G +N +TYN L++G C ++++ + + + + + P+
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG-LAPNAF 212
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+Y+ L++ + A+ +E+ +G P +SY L+ F G+ A +F E+
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
K +++++N+L+ C G P V TY N +A +
Sbjct: 273 PAKG-FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 601 PGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
+AL + E+ + R S + V EG +D + C+ +R+
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK-CLDEMIYRRC 384
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 176/445 (39%), Gaps = 70/445 (15%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V++ M+ SG +P A++ +V++L G+ A+ L + K+ D ++
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL-------VEKMEDHGYPSN-- 175
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
T +NA++ G LQ + + Q G+ P+A +Y+ +++ ++ D V +
Sbjct: 176 --TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR------------RDLC- 318
L+ I+ + + + + L+ + G D A + + + K R LC
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 319 --------RILRES----------------NSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
+L E NS G+ + Q L S
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 355 XVYQP-------------------PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
Y P ++ + PN Y + + +V + ++++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
+ + +H Y +V+++L + G A Q+L EMTR G + TY+ L++G C
Sbjct: 414 LSNKQKCCTHD---FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCL 470
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ A E+L M E +P V ++N +I G + + A+ F M + P +
Sbjct: 471 EGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 530
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEM 540
+Y L++ A + +LA V DE+
Sbjct: 531 TYAILVEGIAHEDELELAKEVLDEL 555
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 173/447 (38%), Gaps = 71/447 (15%)
Query: 154 SVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPD 213
S ++S++ G+ P+V + ++ L + +A+ ++ + V++ PD
Sbjct: 92 SHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAI-----------RVIELMVSSGIIPD 140
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYN-IVMKLCCRKDRKDLLVFVL 272
A+ ++N G+ +QL ++M G + ++YN +V LC L FV
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV- 199
Query: 273 ERILEQNV-PLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
ER++++ + P T L AAY K R G
Sbjct: 200 ERLMQKGLAPNAFTYSFLLEAAY------------------KER---------------G 226
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+++V KLL ++ K PN Y L+ G+ K GR D +
Sbjct: 227 TDEAV--KLLDE-----------------IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + + A + VSY ++ L G + A +LAEM + + +TYNIL+
Sbjct: 268 LFRELPAKGFKA---NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 452 GYCKQLQIDKARELLREMAE-DAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
+ ++A ++L+EM++ + + + SYN +I + +EM R
Sbjct: 325 SLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRC 384
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
P + +Y + + + + A + + N + + ++ CR G
Sbjct: 385 KPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF-YKSVITSLCRKGNTFAAF 443
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIAL 597
GF PD TY + G+ L
Sbjct: 444 QLLYEMTRCGFDPDAHTYSALIRGLCL 470
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 136/338 (40%), Gaps = 56/338 (16%)
Query: 205 DVAADSRPDTG-AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKD 263
++ D P T FN ++ +C +G K + F + F P SYN ++
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 264 RKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRE 323
+ L+ +V +++LE + T + L+ G +D
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD---------------------- 271
Query: 324 SNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
+ D +F ++ + + P YT N ++
Sbjct: 272 --------RFDRLFDEMARDGFS----------------PDSYTYNILLHIL-------- 299
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
G+ + + L + + P + YTT++ L +AG ++ + L EM + G +
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
+ Y +++ GY ++DKA+E+ REM ++ P+V +YN +I G + + A
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
EM +RG P + Y+TL+ +G+ A +V EMV
Sbjct: 419 EMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P SY ++++L+ V +M G S + +TYNILL + ++D+ L
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
EMA D PD +YNIL+ + AL+ N M+ GI P+ + YTTL+ +
Sbjct: 277 FDEMARDG-FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
+G + DEMV + D++ + +++ GY G G P+V
Sbjct: 336 RAGNLEACKYFLDEMVK-AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 586 GTYGSFANGIALARKPGEALILWNEVKER 614
TY S G+ +A + EA L E++ R
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESR 423
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 391 RMLEAMRRQ--DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
+++E + +Q +D S PD ++Y ++ + G MDR ++ EM R G S + TYNI
Sbjct: 236 KLIEWVYKQMLEDGFS-PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI 294
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAR 508
LL K + A L M E I P V+ Y LIDG + F +EM
Sbjct: 295 LLHILGKGNKPLAALTTLNHMKE-VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 509 GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXX 568
G P + YT ++ + +SG+ A +F EM ++ ++ +N ++ G C G
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP-NVFTYNSMIRGLCMAGEFRE 412
Query: 569 XXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
G +P+ Y + + + A K EA
Sbjct: 413 ACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEA 448
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N +L G F +LFDEM + G PD+ +YNI++ +
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI------------- 298
Query: 272 LERILEQNVPL-CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ + N PL +TTL+ + +D L +I R + C+ + + G
Sbjct: 299 ---LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK-AG 354
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+ D V ++ S + K PN Y ++++G +G +
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 414
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
+L+ M + +P+ V Y+T+VS L KAG + AR+V+ EM + G
Sbjct: 415 WLLKEM---ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
+Y++L+K + + + L+ EM +D ++N+LI C + A+ F +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDG-FPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+ P K SY ++ + Q KL V+ +M+ D D++ +N+L+ RLG
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG-FSPDVLTYNILLWTNYRLG 268
Query: 565 XXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
+GF PD TY + + KP AL N +KE
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P IY +L+K + G +S ++ + + D Y+T++S+L+KAG +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAY---EGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+L EM+ G + +TYN+L+ G+C + + A +L EM E ++PDV+SYN+++
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG-LKPDVISYNMILG 336
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+ A F +M RG +P +SY + Q + A + DEM+
Sbjct: 337 VFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 37/257 (14%)
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
D PD +Y ++ ++G D A ++ EM + V +T+ L+ G CK ++
Sbjct: 145 DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 461 KAREL-----------------------------------LREMAEDAEIQPDVVSYNIL 485
+A ++ L++ A + +I+ D Y+ L
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I I S EM +G P ++Y L+ F + + A+RV DEMV +
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV-EKG 323
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+K D+I++NM++ + R+ G PD +Y +G+ + EA
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 606 ILWNEVKER-WEAGRDR 621
++ +E+ + ++ RDR
Sbjct: 384 VILDEMLFKGYKPRRDR 400
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 140/353 (39%), Gaps = 56/353 (15%)
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
+PD +N +++ C+ SG L+LFDEM + V P +++ ++ C+ R
Sbjct: 148 GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSR----- 202
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
V + H ++ Y G T I ++ LC+I
Sbjct: 203 ----------VKEALKMKHDMLKVY---GVRPTVHIYASLIKA----LCQI--------- 236
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G+ F+ L + + +Y +TL+ +K+GR ++
Sbjct: 237 -GELSFAFK--LKDEAYEGKIKVDAAIY----------------STLISSLIKAGRSNEV 277
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+LE M + PD V+Y +++ + A +VL EM G+ + I+YN++
Sbjct: 278 SMILEEMSEK---GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
L + + + ++A L +M PD +SY I+ DG A +EM +G
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRG-CSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
P + ++ SG+ ++ +V + + D W++++ C+
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLHRG--IAGDADVWSVMIPTMCK 444
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 418 LVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQP 477
L+K G +++ ++ L+ + G + TYNIL+ G + D A +L EM + +++P
Sbjct: 128 LLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVK-KKVKP 185
Query: 478 DVVSYNILIDGCILVDDS--AGALSFFNEM-RARGIAPTKISYTTLMKAFALSGQPKLAH 534
V++ LI G L DS AL ++M + G+ PT Y +L+KA G+ A
Sbjct: 186 TGVTFGTLIHG--LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAF 243
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
++ DE + ++KVD ++ L+ + G G PD TY NG
Sbjct: 244 KLKDE-AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
Query: 595 IALARKPGEALILWNEVKER 614
+ A + +E+ E+
Sbjct: 303 FCVENDSESANRVLDEMVEK 322
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 21/310 (6%)
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
P ++ L++ + + V + +L+ M + PD + ++ AL K G +
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPK---FGFEPDEYVFGCLLDALCKHGSV 234
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
A ++ +M R+ N + LL G+C+ ++ +A+ +L +M E A +PD+V Y
Sbjct: 235 KDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE-AGFEPDIVDYTN 292
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
L+ G A A +MR RG P YT L++A + + A +VF EM
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM-ERY 351
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
+ D++ + LV G+C+ G G P TY I +A + E+
Sbjct: 352 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH----IMVAHEKKES 407
Query: 605 LILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEEN 664
+ E E E R E PD G+ + + + + ++A+ + MEEN
Sbjct: 408 ---FEECLELMEKMRQIE--------YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 665 GIPPNKTKFT 674
G+ P F
Sbjct: 457 GLSPGVDTFV 466
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 5/231 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ N R +T+L+ G+ + G++ + +L M +++ PD V YT ++S AG M
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM---NEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +L +M R G N Y +L++ CK ++++A ++ EM E E + DVV+Y L
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM-ERYECEADVVTYTAL 363
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ G ++M +G+ P++++Y +M A + + ++M
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM-RQIE 422
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
D+ +N+++ C+LG NG P V T+ NG+A
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLA 473
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 152/416 (36%), Gaps = 107/416 (25%)
Query: 164 YLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNA 223
Y ++ + ++V L+ GL + + ++ +P++ F ++
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL----------FVVLVQR 192
Query: 224 CANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCR----KDRKDLLVFVLERILEQN 279
A++ K +++ DEMP+FG PD + ++ C+ KD L +
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF-----EDMRMR 247
Query: 280 VPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQK 339
P+ + SL+ + G + A+ ++ M E
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA-------------------------- 281
Query: 340 LLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ 399
+ P+ YT L+ GY +G+++D +L MRR+
Sbjct: 282 -------------------------GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 400 DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI 459
P+ YT ++ AL K M+ A +V EM R A+ +TY L+ G+CK +I
Sbjct: 317 ---GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 460 DKARELLREMAEDA----------------------------------EIQPDVVSYNIL 485
DK +L +M + E PD+ YN++
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
I + + A+ +NEM G++P ++ ++ A G A F EMV
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAE--IQPDVVSYNILIDGCILVDDSAGALSFF 502
Y ++K K Q L+ EM ++ I+P++ + +L+ D A+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVL 206
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+EM G P + + L+ A G K A ++F++M R V+L + L+ G+CR
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM--RMRFPVNLRYFTSLLYGWCR 264
Query: 563 LGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
+G GF PD+ Y + +G A A K +A L +++ R
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 170/427 (39%), Gaps = 70/427 (16%)
Query: 188 LGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
G + +RK T+P++ P+ F ++ A++ K +++ DEMP++G+ P
Sbjct: 147 FGAVWGLIEEMRK-TNPELI---EPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDL-DTAEII 306
D + ++ C+ V E + E+ P + SL+ + G L + E++
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVL 259
Query: 307 VQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPY 366
VQ ++E+ E
Sbjct: 260 VQ------------MKEAGLE--------------------------------------- 268
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA-GFMD 425
P+ ++T L+ GY +G+++D ++ MR++ P+ YT ++ AL + MD
Sbjct: 269 -PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR---GFEPNVNCYTVLIQALCRTEKRMD 324
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +V EM R G A+ +TY L+ G+CK IDK +L +M + + P V+Y +
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG-VMPSQVTYMQI 383
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM-VNDP 544
+ + L +M+ RG P + Y +++ G+ K A R+++EM N
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFH--PDVGTYGSFANGIALARKPG 602
VD +++ G+ G G P GT S N + K
Sbjct: 444 SPGVDTFV--IMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 603 EALILWN 609
A +W+
Sbjct: 502 MAKDVWS 508
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 22/311 (7%)
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
P ++ LM+ + + V V +L+ M + PD + ++ AL K G +
Sbjct: 162 PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKY---GLEPDEYVFGCLLDALCKNGSV 218
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
A +V +M R N + LL G+C++ ++ +A+E+L +M E A ++PD+V +
Sbjct: 219 KEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE-AGLEPDIVVFTN 276
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP-KLAHRVFDEMVND 543
L+ G A A N+MR RG P YT L++A + + A RVF EM
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ER 335
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
+ D++ + L+ G+C+ G G P TY + E
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE 395
Query: 604 ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEE 663
L L ++K R PD + + + + + ++A+ + ME
Sbjct: 396 CLELIEKMKRR---------------GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 664 NGIPPNKTKFT 674
NG+ P F
Sbjct: 441 NGLSPGVDTFV 451
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
LE ++R D P+ V+Y+++++ L K+G + A + L EM ++ N IT++ L+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
Y K+ ++ K + + M + I P+V +Y+ LI G + + A+ + M ++G P
Sbjct: 128 YAKRGKLSKVDSVYKMMIQ-MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR--VKVDLIAWNMLVEGYCRLGXXXXXX 570
++Y+TL F S + ++ D+M P+ V + ++ N L++GY + G
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDM---PQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 571 XXXXXXXXNGFHPDVGTY-----GSFANG 594
NG P++ +Y G FANG
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANG 272
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD V+ +++V+ + + A V +M ++G+ + + IL+ CK + A E
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
+L+ M +D I P+VV+Y+ LI G A A +EM ++ I P I+++ L+ A+
Sbjct: 70 VLKRM-KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 525 ALSGQPKLAHRVFDEMVN---DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
A G+ V+ M+ DP V ++ L+ G C G
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNV----FTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTL 641
P+V TY + ANG + + + + L +++ +R A N+ S +TL
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA----NTVSC-----------NTL 229
Query: 642 ADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASR 692
+A AL + M NG+ PN + + + + K SR
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 145/336 (43%), Gaps = 23/336 (6%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD ++++N S K + + +M + G+ D + I++ C+ + V
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD-----LCRILRESNS 326
L+R+ ++ + + T SL+ G L AE + M K+ + ++
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQ--------------PPLLPKPYTPNTRI 372
K DSV++ ++ S++ + +Y ++ K TPN
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y+TL G+ KS RV D +++L+ M ++ +A + VS T++ +AG +D A V
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAA---NTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
MT G+ N +YNI+L G +++KA M + D+++Y I+I G
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM-QKTRNDLDIITYTIMIHGMCKA 306
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
A F +++ + + P +YT ++ +G
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 2/179 (1%)
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
+ +M ++G+ + +T + L+ G+C I A + +M E I+ DVV ILID
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMGIKRDVVVDTILIDTLC 59
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
AL M+ RGI+P ++Y++L+ SG+ A R EM + ++ ++
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM-DSKKINPNV 118
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
I ++ L++ Y + G P+V TY S G+ + + EA+ + +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 145/327 (44%), Gaps = 28/327 (8%)
Query: 370 TRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM--DRA 427
++Y +M Y +SG+ S +++AMR++ PD +S+ T+++A +K+G + + A
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQR---GCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L + G+ + ITYN LL + +D A ++ +M E QPD+ +YN +I
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMIS 340
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+A A F E+ +G P ++Y +L+ AFA + V+ +M K
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXX-XXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
D + +N ++ Y + G +G +PD TY + + A + EA
Sbjct: 401 -DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 607 LWNEVKE----------------RWEAGRDRENSDSSVPPL----KPDEGLLDTLADICV 646
L +E+ + +AG+ E D+ L KPD + D+ +
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 647 RAAFFRKALEIVACMEENGIPPNKTKF 673
R RKA + M +G P+ T +
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 149/344 (43%), Gaps = 57/344 (16%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVM--KLCCRKDRKDLLVFVLER 274
+NA++ + SG +L D M Q G VPD +S+N ++ +L +L V +L+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+ + T ++L++A +LD A + + M R C+
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR---CQ--------------- 329
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
P+ Y ++ Y + G ++ R+
Sbjct: 330 ---------------------------------PDLWTYNAMISVYGRCGLAAEAERLFM 356
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
+ + PD V+Y +++ A + ++ ++V +M ++G + +TYN ++ Y
Sbjct: 357 ELELK---GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 455 KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
KQ Q+D A +L ++M + PD ++Y +LID + + A + +EM GI PT
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+Y+ L+ +A +G+ + A F M+ K D +A++++++
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSG-TKPDNLAYSVMLD 516
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 151/349 (43%), Gaps = 29/349 (8%)
Query: 182 GDSVEALGLFRAVTRRLRKITDPDVAADSR------PDTGAFNAVLNACANSGD--GKMF 233
GD V+ V R K + D+ PD +FN ++NA SG +
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
++L D + G+ PDA++YN ++ C R D V V E + + T +++++
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV-FQKLLPNSMNQSXXXX 352
Y G AE + + K G D+V + LL +
Sbjct: 342 YGRCGLAAEAERLFMELELK----------------GFFPDAVTYNSLLYAFARERNTEK 385
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT 412
VYQ + + + Y T++ Y K G++ +++ + M+ S +PD ++YT
Sbjct: 386 VKEVYQQ-MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL--SGRNPDAITYT 442
Query: 413 TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAED 472
++ +L KA A +++EM +G+ TY+ L+ GY K + ++A + M
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 473 AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
+PD ++Y++++D + +++ A + +M + G P+ Y ++
Sbjct: 503 G-TKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/396 (16%), Positives = 159/396 (40%), Gaps = 21/396 (5%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +N++++A A G + +F+ M + G P S NI++ C R + L V
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+E + + + +++ ++ A+ G++ + I +M+ G
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA----------------GY 888
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+++ + + + + + I+ +++K Y + D +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA---IEDYKK 945
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
++ +R ++ PD +Y T++ + + ++ +M +G+ TY L+
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
+ KQ +++A +L E+ ++ D Y+ ++ + A M+ GI
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE 1064
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
PT + LM +++ SG P+ A +V + D V++ + ++ +++ Y R
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNL-KDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
G PD + F + +++ E ++L
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLL 1159
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+YT +++ Y K ++ +R+ S PD ++ +++SA + G +RAR +
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQ---SGRTPDLKTWNSLMSAYAQCGCYERARAIF 810
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
M R G S + NILL C ++++ ++ E+ +D + S +++D
Sbjct: 811 NTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL-QDMGFKISKSSILLMLDAFAR 869
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+ ++ M+A G PT Y +++ + + A + EM + KV+L
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELA 928
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
WN +++ Y + G PD TY + R+P E +L ++
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 612 K 612
+
Sbjct: 989 R 989
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 77/419 (18%)
Query: 148 HTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVA 207
T S K +L+ G +K W+ +S +G EAL +F+ + R
Sbjct: 45 QTQIQKSQTKPLLKCGD-SDIKEWNVAISSYMRTGRCNEALRVFKRMPR----------- 92
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
+ ++N +++ +G+ ++ +LFDEMP+ D +S+N+++K R
Sbjct: 93 ----WSSVSYNGMISGYLRNGEFELARKLFDEMPE----RDLVSWNVMIKGYVRNRNLGK 144
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ E + E++V + +++++ Y G +D A + M EK
Sbjct: 145 ARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEK-------------- 186
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI--YTTLMKGYMKSGR 385
ND + LL + S +++ N + + L+ G++K +
Sbjct: 187 -----NDVSWNALLSAYVQNSKMEEACMLFKS-------RENWALVSWNCLLGGFVKKKK 234
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + R+ DS + D VS+ T+++ ++G +D ARQ+ E V T
Sbjct: 235 IVEA-------RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FT 283
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+ ++ GY + +++AREL +M E E VS+N ++ G + + A F+ M
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNE-----VSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
R ++ ++ T++ +A G+ A +FD+M P K D ++W ++ GY + G
Sbjct: 339 PCRNVS----TWNTMITGYAQCGKISEAKNLFDKM---P--KRDPVSWAAMIAGYSQSG 388
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 152/393 (38%), Gaps = 56/393 (14%)
Query: 170 AWSAVVSRLASSGDSVEALGLFRAVTR--------------RLRKITDPDVAADSRP--D 213
+W+A++S + EA LF++ + +KI + DS D
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLE 273
++N ++ A SG QLFDE P V D ++ ++ + + + +
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 274 RILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKN 333
++ E+N + ++++A YV ++ A+ + M CR N
Sbjct: 306 KMPERNE----VSWNAMLAGYVQGERMEMAKELFDVMP------CR-------------N 342
Query: 334 DSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML 393
S + ++ ++ P + + ++ GY +SG + +R+
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRLF 397
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
M R+ + S+++ +S ++ +Q+ + + G N LL Y
Sbjct: 398 VQMERE---GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
CK I++A +L +EMA D+VS+N +I G AL FF M+ G+ P
Sbjct: 455 CKCGSIEEANDLFKEMA-----GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+ ++ A + +G + F M D V
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 19/320 (5%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ +T + + SG V+ + ++L + + + P+ + +V K G ++ A
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLL--LYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 428 RQVLAEMTRIGVS-ANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
V+ EM R G+S N ITY+ L+ + +A EL +M I PD V++N++I
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+G + A + M+ G P +Y+ LM F G+ + A + FDE V +
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE-VKKTGL 334
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
K+D + + L+ +CR G + D TY G++ + EAL
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL- 393
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
++ ++W + N S L +C KA++ ++ M E GI
Sbjct: 394 ---QMLDQWGSEGVHLNKGSYRIILNA----------LCCNGE-LEKAVKFLSVMSERGI 439
Query: 667 PPNKTKFTRIYVEMHSRMFT 686
P+ + + V + +T
Sbjct: 440 WPHHATWNELVVRLCESGYT 459
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/403 (19%), Positives = 168/403 (41%), Gaps = 76/403 (18%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P + A S ++ L SG+ ++R+L ++ +P+T FN ++
Sbjct: 158 PSLNAISTCLNLLIDSGEV--------NLSRKLLLYAKHNLGL--QPNTCIFNILVKHHC 207
Query: 226 NSGDGKMFLQLFDEMPQFGV-VPDALSYNIVMKLCCRKDRKDLLVFVLERIL-EQNVPLC 283
+GD + +EM + G+ P++++Y+ +M R V + E ++ ++ +
Sbjct: 208 KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPD 267
Query: 284 MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPN 343
T + ++ + G+++ A+ I+ M++ N
Sbjct: 268 PVTFNVMINGFCRAGEVERAKKILDFMKK------------------------------N 297
Query: 344 SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSA 403
N PN Y+ LM G+ K G++ + + + +++ +
Sbjct: 298 GCN---------------------PNVYNYSALMNGFCKVGKIQEAKQTFDEVKK---TG 333
Query: 404 SHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAR 463
D V YTT+++ + G D A ++L EM A+ +TYN++L+G + + ++A
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 464 ELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA 523
++L + + + + SY I+++ + A+ F + M RGI P ++ L+
Sbjct: 394 QMLDQWGSEG-VHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 524 FALSGQPKLAHRVFDEMVNDPRVKVDLI----AWNMLVEGYCR 562
SG ++ RV +++ LI +W +VE C+
Sbjct: 453 LCESGYTEIGVRVLIGF-----LRIGLIPGPKSWGAVVESICK 490
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNTR Y LM+ + + +S ++ M +D PD SY ++ + G ++ A
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---PDVDSYKILIQGFCRKGQVNGA 244
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L +M G +R++Y LL C++ Q+ +A +LL M PD+V YN +I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG-CNPDLVHYNTMIL 303
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN---DP 544
G D + A ++M + G +P +SY TL+ G + +EM++ P
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG--FHPD 584
V N LV+G+C G NG H D
Sbjct: 364 HFSVS----NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 401
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 366 YTPNTRIYTTLMKGYMKSGR----VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
Y I+T L+K Y ++ +S +MLE + P H++ ++ LV
Sbjct: 115 YPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF-----NFTPQPKHLN--RILDVLVSH 167
Query: 422 -GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G++ +A ++ GV N +YN+L++ +C + A +L +M E ++ PDV
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE-RDVVPDVD 226
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
SY ILI G GA+ ++M +G P ++SYTTL+ + Q + A+++ M
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
DL+ +N ++ G+CR NG P+ +Y + G+
Sbjct: 287 -KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 132/322 (40%), Gaps = 66/322 (20%)
Query: 154 SVVKSMLRSGYLPHVKAWSAVVSRLASS-GDSVEALGLFRAVTRRLRKITDPDVAADSRP 212
S ML + P K + ++ L S G +A LF+ + RL + P
Sbjct: 140 STFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK--SSRLHGVM---------P 188
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
+T ++N ++ A + D + QLF +M + VVPD SY I+++ CRK + + + +L
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGK 332
+ +L + V + + L + +RE + LCR+
Sbjct: 249 DDMLNKG----------FVPDRLSYTTLLNSLCRKTQLREAYKLLCRM------------ 286
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
KL K P+ Y T++ G+ + R D ++
Sbjct: 287 ------KL-----------------------KGCNPDLVHYNTMILGFCREDRAMDARKV 317
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
L+ M + P+ VSY T++ L G D ++ L EM G S + N L+KG
Sbjct: 318 LDDML---SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 453 YCKQLQIDKARELLREMAEDAE 474
+C ++++A +++ + ++ E
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGE 396
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 56/278 (20%)
Query: 212 PDTGAFNAVLNA-CANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
P N +L+ ++ G + +LF GV+P+ SYN++M+ C D +
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ ++LE++V D+D+ +I++Q CR G
Sbjct: 212 LFGKMLERDV----------------VPDVDSYKILIQG-------FCRK---------G 239
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
N ++ +LL + +N K + P+ YTTL+ + ++ +
Sbjct: 240 QVNGAM--ELLDDMLN-----------------KGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
++L M+ + +PD V Y T++ + AR+VL +M G S N ++Y L+
Sbjct: 281 KLLCRMKLK---GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
G C Q D+ ++ L EM P N L+ G
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKG-FSPHFSVSNCLVKG 374
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
S+ ++ L + + + VLA+ G + L+K Y + +K +M
Sbjct: 86 SHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM 145
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSA---GALSFFNEMRARGIAPTKISYTTLMKAFAL 526
E P N ++D +LV A F R G+ P SY LM+AF L
Sbjct: 146 LE-FNFTPQPKHLNRILD--VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL 202
Query: 527 SGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVG 586
+ +A+++F +M+ + V D+ ++ +L++G+CR G GF PD
Sbjct: 203 NDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 587 TYGSFANGIALARKPGEALILWNEVK 612
+Y + N + + EA L +K
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMK 287
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 30/257 (11%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + KS G +P+ ++++ ++ + D A LF + R D
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER-----------DVV 222
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD ++ ++ G ++L D+M G VPD LSY ++ CRK
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK--------- 273
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-RDLCRILRESNSEYIG 330
++ E LC L V + + I+ RE R D ++L + S G
Sbjct: 274 -TQLREAYKLLCRMKLKGCNPDLVHYNTM-----ILGFCREDRAMDARKVLDDMLSN--G 325
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+SV + L + Y ++ K ++P+ + L+KG+ G+V +
Sbjct: 326 CSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 385
Query: 391 RMLEAMRRQDDSASHPD 407
++E + + ++ H D
Sbjct: 386 DVVEVVMKNGETL-HSD 401
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 189/483 (39%), Gaps = 75/483 (15%)
Query: 160 LRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNA 219
LR+ Y P + + L + G + G + + R +I D V R + N
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLA----GRYESSMRIFLRIPDFGVKRSVR----SLNT 160
Query: 220 VLNACANSGDGKMFLQLFDEMPQ-FGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
+LN + + +F + FG+ P+ + N+++K C+K+ + VL+ I
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM 220
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
+ + T +++ YV GD+++A+ R+L E
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAK--------------RVLEE--------------- 251
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
+L + + P+ YT LM GY K GR S+ +++ M +
Sbjct: 252 ----------------------MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+ P+ V+Y ++ AL K AR + EM + ++ C+ +
Sbjct: 290 NE---IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+D+A L R+M ++ PD + LI A F+E +G P+ ++Y
Sbjct: 347 VDEACGLWRKMLKN-NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYN 404
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
TL+ G+ A R++D+M + + K + +N+L+EG + G
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMY-ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Query: 579 NGFHPDVGTYGSFANGIALARKPGEAL------ILWNEV-KERWEAGRDR--ENSDSSVP 629
G P+ T+ G+ K +A+ ++ +V KE WE + D V
Sbjct: 464 IGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKFAGELDKGVL 523
Query: 630 PLK 632
PLK
Sbjct: 524 PLK 526
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 130/311 (41%), Gaps = 21/311 (6%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
TPN L+K K + ++L+ + P+ V+YTT++ V G M+
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEI---PSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A++VL EM G + TY +L+ GYCK + +A ++ +M E EI+P+ V+Y ++I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM-EKNEIEPNEVTYGVMI 303
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
S A + F+EM R P ++ A + A ++ +M+ +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN-NC 362
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
D + L+ C+ G G P + TY + G+ + EA
Sbjct: 363 MPDNALLSTLIHWLCKEG-RVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGI 666
LW+++ ER KP+ + L + + ++ + ++ M E G
Sbjct: 422 LWDDMYER---------------KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 667 PPNKTKFTRIY 677
PNKT F ++
Sbjct: 467 FPNKTTFLILF 477
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 172/422 (40%), Gaps = 48/422 (11%)
Query: 169 KAWSAVVSRLASSGDSVEA---LGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
K S V+ R+ SG V+A LG+F T L + D D + A N ++N
Sbjct: 139 KKRSFVLIRV--SGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIK----ACNFLMNRMT 192
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
G M + LF ++ Q G+ + +Y IV+K CRK + +L I ++V T
Sbjct: 193 EFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL--IENESVFGYKT 250
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKR---------------RDLCRILRESNSEY-- 328
++ L G+ + A ++ + +++ R C ++ +E
Sbjct: 251 FINGLCVT----GETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVI 306
Query: 329 -----IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
IG D + + ++ + +L K N I + +++ Y K
Sbjct: 307 IEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK- 365
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
+ + LE + D D V Y AL K G ++ A ++L EM G+ +
Sbjct: 366 --MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
I Y L+ GYC Q ++ A +L+ EM + + PD+++YN+L+ G L +
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNG-MSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND-PRVKVDLIAWNMLVEGYCR 562
M+A G P ++ + +++ + + K A F + P K V+GYC
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKAS------FVKGYCE 536
Query: 563 LG 564
G
Sbjct: 537 AG 538
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/504 (18%), Positives = 196/504 (38%), Gaps = 71/504 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKIT--------- 202
A SV+ M G+ V A AV+ R + + EALG + + K+
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 203 ---DPDVAADSRP------------DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVP 247
D+ ++ D +N +A + G + +L EM G+VP
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 248 DALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV 307
D ++Y ++ C + + + +++ ++ + + T + LV+ G + I
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
+ M+ + G K ++V ++ + + + L K
Sbjct: 482 ERMKAE----------------GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--C 523
Query: 368 PNTRIYTTLMKGYMKSGRVSDT----VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
P + + +KGY ++G VR+ +R+ Y + +L G+
Sbjct: 524 PENK--ASFVKGYCEAGLSKKAYKAFVRLEYPLRKS----------VYIKLFFSLCIEGY 571
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+++A VL +M+ V R ++ +CK + +A+ L M E I PD+ +Y
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI-PDLFTYT 630
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF---------ALSGQPKLAH 534
I+I +++ A S F +M+ RGI P ++YT L+ + S Q ++
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 535 RVFDEMVND---PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSF 591
R E++ + + +D++ + +L++ C++ +G PD+ Y +
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 592 ANGIALARKPGEALILWNEVKERW 615
+ A+ L E+ +++
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKKY 774
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 18/307 (5%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y T + G +G V ++ + + A VV M A V+
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM IG + ++ YCK + + +A L +M ++ + V ++++ +
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG-LKVNCVIVSLILQCYCKM 366
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
D AL F E R I ++ Y A + G+ + A + EM D + D+I
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVIN 425
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+ L++GYC G NG PD+ TY +G LAR E +L E+
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG--LARNGHEEEVL--EIY 481
Query: 613 ERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTK 672
ER +A + N+ ++ + EGL C A ++A + + +E+ P NK
Sbjct: 482 ERMKAEGPKPNAVTNSVII---EGL-------CF-ARKVKEAEDFFSSLEQK-CPENKAS 529
Query: 673 FTRIYVE 679
F + Y E
Sbjct: 530 FVKGYCE 536
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K P R + ++ K+ + +++ +AM D+ P +SY ++SAL K
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV---DNGEKPTVISYGALLSALEKGKL 508
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
D A +V M ++G+ N Y + Q + + LL+EMA I+P VV++N
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG-IEPSVVTFN 567
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+I GC S A +F+ M++ + P +I+Y L++A A +P+LA+ + + N+
Sbjct: 568 AVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNE 627
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH---PDHVSYTTVVSALVKAGFMDRA 427
+++ ++KG+ K R+ V +++ ++R+ + P+ Y +++ A+ GF + A
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAM--RGFGE-A 203
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L +M G+ N +TYN L+ Y ++ + KA +L ++ ++ +P+ ++Y+ +
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGIL-DLTKEKGFEPNPITYSTALL 262
Query: 488 GCILVDDSAGALSFFNEMRAR 508
++D GAL FF E+R +
Sbjct: 263 VYRRMEDGMGALEFFVELREK 283
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 152/390 (38%), Gaps = 77/390 (19%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ L+K + G + + + M ++ + + Y T++ A K+ ++ +
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKK---GIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC-- 489
EM G+ + TYNIL+ Y +++Q D LLREM ED ++P+V SY LI
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGR 461
Query: 490 --ILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND---- 543
+ D +A A F M+ G+ P+ SYT L+ A+++SG + A+ F+EM +
Sbjct: 462 TKKMSDMAADA---FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 544 ------------------------------PRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
++K I +N L++G+ + G
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 574 XXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKP 633
G P V TY N A + + L E+ + LKP
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM---------------AALNLKP 623
Query: 634 DEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRA 693
D T+ VR F++A M ++G P+ + ++ + K ++
Sbjct: 624 DSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRA-----ILEDKAKTKN 678
Query: 694 RQDR------------RVERKRAAEAFKFW 711
R+D+ RV+ K + +FW
Sbjct: 679 RKDKTAILGIINSKFGRVKAKTKGKKDEFW 708
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 19/310 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
R +T +N +++A S + LF EM G+ P A +YNI+M R+ + D++
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+L + + + + + L++AY + M + D +++ +G
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGR----------TKKMSDMAADAFLRMKK-----VG 480
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K S L ++ + S + + P+ YT+++ + +SG +
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ + M R+ + ++Y T++ K G AR V++E +++G+ + +TYN+L+
Sbjct: 541 EIWKLMLREKIKGTR---ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
Y + Q K +LL+EMA ++PD ++Y+ +I + V D A + M G
Sbjct: 598 NAYARGGQDAKLPQLLKEMAA-LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQ 656
Query: 511 APTKISYTTL 520
P SY L
Sbjct: 657 VPDPRSYEKL 666
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 160/396 (40%), Gaps = 24/396 (6%)
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF-V 271
D +NA ++ + S ++++ M + V PD ++ I++ + R V+ +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E++ E+ V LV ++ D G + A +I M +K I+ + +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 332 KN-----DSVFQKLLPNSMNQSXXXXXXXV------YQPPLLPK--------PYTPNTRI 372
N + +F ++ + S + QP ++ PN +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
YT L+ Y ++ ++SD +A R P SYT ++ A +G+ ++A
Sbjct: 452 YTCLISAYGRTKKMSDMA--ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM + G+ + TY +L + + K E+ + M + +I+ ++YN L+DG
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE-KIKGTRITYNTLLDGFAKQ 568
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A +E G+ P+ ++Y LM A+A GQ ++ EM +K D I
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA-LNLKPDSIT 627
Query: 553 WNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
++ ++ + R+ +G PD +Y
Sbjct: 628 YSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P T Y +++ G+ K RV D RML++M + PD V+++T+++ KA +D
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK---GCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM R G+ AN +TY L+ G+C+ +D A++LL EM + PD ++++ ++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS-CGVAPDYITFHCMLA 123
Query: 488 G 488
G
Sbjct: 124 G 124
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
M R + ITYN ++ G+CKQ ++D A+ +L MA PDVV+++ LI+G
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAK 59
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
+ F EM RGI ++YTTL+ F G A + +EM++ V D I +
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS-CGVAPDYITF 118
Query: 554 NMLVEGYC 561
+ ++ G C
Sbjct: 119 HCMLAGLC 126
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P ++Y +++ K +D A+++L M G S + +T++ L+ GYCK ++D E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
EM I + V+Y LI G V D A NEM + G+AP I++ ++
Sbjct: 68 FCEMHRRG-IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 526 LSGQPKLAHRVFDEM 540
+ + A + +++
Sbjct: 127 SKKELRKAFAILEDL 141
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+ K +P+ ++TL+ GY K+ RV + + + M R+ A + V+YTT++ +
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA---NTVTYTTLIHGFCQ 92
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM--AEDAEIQPD 478
G +D A+ +L EM GV+ + IT++ +L G C + ++ KA +L ++ +ED ++ +
Sbjct: 93 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 152
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 56/419 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA--- 208
A +VK M + G P+V ++ ++ +G EAL + R+RK+ +P+ A
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM--RVRKL-NPNEATIRT 290
Query: 209 ------------------------DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFG 244
DS ++AVL +N+ K Q ++ + G
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 245 VVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAE 304
+PD+ ++N M C DL V C V+ V G +
Sbjct: 351 YIPDSSTFNAAMS--CLLKGHDL------------VETC-RIFDGFVSRGVKPG-FNGYL 394
Query: 305 IIVQAMREKRR--DLCRILRESNSEYIGGKNDSVFQ-KLLPNSMNQSXXXXXXXVYQPPL 361
++VQA+ +R + R L++ + G SV+ + + + ++ ++ +
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMG---VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Query: 362 LPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
+ +PN + T + GY G V +LE + PD ++++ +++ L +A
Sbjct: 452 QDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH---GFKPDVITFSLIINCLCRA 508
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
+ A EM G+ N ITYNIL++ C D++ +L +M E+ + PD+ +
Sbjct: 509 KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG-LSPDLYA 567
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
YN I + A M G+ P +Y+TL+KA + SG+ A +F +
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSI 626
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/485 (19%), Positives = 183/485 (37%), Gaps = 123/485 (25%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+P T +NAV++A S + F +M G PD +YNI++ C+K D +
Sbjct: 177 KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIR 236
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD------------LC 318
+++++ ++ + T L+ ++ G +D A ++ MR ++ + +
Sbjct: 237 LVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 319 RIL--------------RESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPK 364
R L ++SN + +G D+V L NSM + + + +
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVG--YDAVLYCLSNNSMAKETGQFLRKIGE-----R 349
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
Y P++ + M +K + +T R+ + + P Y +V AL+ A
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR---GVKPGFNGYLVLVQALLNA--- 403
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
Q +E R Y KQ+ +D + V SYN
Sbjct: 404 ----QRFSEGDR----------------YLKQMGVDG-------------LLSSVYSYNA 430
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
+ID A F EM+ RGI+P +++ T + +++ G K H V ++++
Sbjct: 431 VIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL--- 487
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
+GF PDV T+ N + A++ +A
Sbjct: 488 ---------------------------------VHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 605 LILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEEN 664
+ E+ E W ++P+E + L C +++++ A M+EN
Sbjct: 515 FDCFKEMLE-W--------------GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 665 GIPPN 669
G+ P+
Sbjct: 560 GLSPD 564
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 137/359 (38%), Gaps = 74/359 (20%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
GY+P ++A +S L D VE +F D V+ +P + ++
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIF-----------DGFVSRGVKPGFNGYLVLVQ 398
Query: 223 ACANS---GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQN 279
A N+ +G +L+ +M G++ SYN V+ C+ R + L + ++
Sbjct: 399 ALLNAQRFSEGDRYLK---QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 280 VPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQK 339
+ + T ++ ++ Y GD+ K V +K
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVK------------------------------KVHGVLEK 485
Query: 340 LLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ 399
LL + + P+ ++ ++ ++ + D + +
Sbjct: 486 LLVHG---------------------FKPDVITFSLIINCLCRAKEIKDA---FDCFKEM 521
Query: 400 DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI 459
+ P+ ++Y ++ + G DR+ ++ A+M G+S + YN ++ +CK ++
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
Query: 460 DKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
KA ELL+ M ++PD +Y+ LI + A F+ + G P SYT
Sbjct: 582 KKAEELLKTMLRIG-LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD--SYT 637
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT Y L+ Y ++ + + + + M+ ++ PD V+Y T++ KAGF+D A
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQ---EAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M G+S + TY++++ K + A L EM P++V++NI+I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMIA 507
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ AL + +M+ G P K++Y+ +M+ G + A VF EM V
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSF 591
D + +LV+ + + G G P+V T S
Sbjct: 568 -DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D +YTT+V L +A ++L EM R G N +TYN L+ Y + + +A +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAG----ALSFFNEMRARGIAPTKISYTTLMK 522
+M E A +PD V+Y LID + AG A+ + M+ G++P +Y+ ++
Sbjct: 418 NQMQE-AGCEPDRVTYCTLID----IHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 523 AFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFH 582
+G AHR+F EMV +L+ +N+++ + + GF
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 583 PDVGTYGSFANGIALARKPGEALILWNEVKER-WEAGRDRENSDSSVPPLKPDEGLLDTL 641
PD TY + EA ++ E++ + W PDE + L
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW----------------VPDEPVYGLL 575
Query: 642 ADICVRAAFFRKALEIVACMEENGIPPN 669
D+ +A KA + M + G+ PN
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y TL+ + K+G + + M + M+ ++ PD +Y+ +++ L KAG + A
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ---EAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ EM G + N +T+NI++ + K + A +L R+M ++A QPD V+Y+I+++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM-QNAGFQPDKVTYSIVME 542
Query: 488 ---GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
C ++++ G F EM+ + P + Y L+ + +G A + + M+
Sbjct: 543 VLGHCGFLEEAEGV---FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ-A 598
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
++ ++ N L+ + R+ G HP + TY
Sbjct: 599 GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY 642
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 23/300 (7%)
Query: 225 ANSGDGKMFLQ---LFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVP 281
N G K F + L DEM + G P+ ++YN ++ R + + V ++ E
Sbjct: 367 GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE 426
Query: 282 LCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLL 341
T +L+ + G LD A + Q M+E G D+ ++
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA----------------GLSPDTFTYSVI 470
Query: 342 PNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD 401
N + ++ ++ + TPN + ++ + K+ +++ M+ +
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ---N 527
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
+ PD V+Y+ V+ L GF++ A V AEM R + Y +L+ + K +DK
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
A + + M + A ++P+V + N L+ + V + A + M A G+ P+ +YT L+
Sbjct: 588 AWQWYQAMLQ-AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 336 VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
++QK++ +++ L K Y P+ +YTT+++G+ + G + ++
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKN-LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M ++ P+ +Y ++ K G + EM R G ++ N ++KG+C
Sbjct: 344 MIKK---GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ D+A E+ + M+E + P+ ++YN LI G + L + E++A G+ P+ +
Sbjct: 401 HGKSDEAFEIFKNMSETG-VTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 516 SYTTLMKAFALS 527
+Y L++ +S
Sbjct: 460 AYAALVRNLKMS 471
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 34/313 (10%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHS---- 289
+++++ + G+ ++ N V+ L C K RK L+R E + + + S
Sbjct: 165 IEVYNVLKDMGISSSVVTCNSVL-LGCLKARK------LDRFWELHKEMVESEFDSERIR 217
Query: 290 -LVAAYVDFGDLDTA-EIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQ 347
L+ A D GD+ E++ Q +++ V+ KL+
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDP----------------GQYVYAKLISGFCEI 261
Query: 348 SXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPD 407
V ++ + P+ IY ++KG + + + + + ++ D PD
Sbjct: 262 GNYACMSEVLHT-MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLK---DKGYAPD 317
Query: 408 HVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLR 467
V YTT++ + G++ AR++ EM + G+ N YN+++ G+ K+ +I
Sbjct: 318 RVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 468 EMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALS 527
EM + ++S N +I G S A F M G+ P I+Y L+K F
Sbjct: 378 EMLRNG-YGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 528 GQPKLAHRVFDEM 540
+ + +++ E+
Sbjct: 437 NKVEKGLKLYKEL 449
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ K PN Y ++ G+ K G +S M R + +S T++
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTM---LSCNTMIKGFCS 400
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G D A ++ M+ GV+ N ITYN L+KG+CK+ +++K +L +E+ + ++P +
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL-KALGLKPSGM 459
Query: 481 SYNILIDGCILVDDSAGALS 500
+Y L+ + D A +L+
Sbjct: 460 AYAALVRNLKMSDSVATSLN 479
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 93/237 (39%), Gaps = 5/237 (2%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT 435
L++ G VS+ +L+ +Q P Y ++S + G +VL M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQ---GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 436 RIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDS 495
+ Y ++KG C + +A + + + +D PD V Y +I G
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL-KDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 496 AGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNM 555
A + EM +G+ P + +Y ++ G+ L ++EM+ + +++ N
Sbjct: 335 GSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGT-MLSCNT 393
Query: 556 LVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
+++G+C G G P+ TY + G K + L L+ E+K
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK 450
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 414 VVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA 473
++ AL G + ++L + + G+ + Y L+ G+C+ E+L M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 474 EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
P + Y +I G + A F ++ +G AP ++ YTT+++ F G A
Sbjct: 279 HF-PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFAN 593
+++ EM+ ++ + A+N+++ G+ + G NG+ + + +
Sbjct: 338 RKLWFEMIKKG-MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 594 GIALARKPGEALILWNEVKE 613
G K EA ++ + E
Sbjct: 397 GFCSHGKSDEAFEIFKNMSE 416
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Query: 397 RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ 456
R+ S H D +Y ++ L + ++L M GV+ N + YN LL CK
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKIS 516
++ +AR L+ EM E P+ V++NILI ++ + + G P ++
Sbjct: 231 GKVGRARSLMSEMKE-----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXX 576
T +M+ G+ A V E V KVD++A N LV+GYC LG
Sbjct: 286 VTKVMEVLCNEGRVSEALEVL-ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEM 344
Query: 577 XXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE---RW 615
G+ P+V TY G AL +N++K RW
Sbjct: 345 ERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRW 386
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 388 DTV-RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY 446
DTV ++L+ M D PD + T++ +A + R V+ +++ G+ + +
Sbjct: 93 DTVYQLLDEM--PDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVF 150
Query: 447 NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMR 506
N +L K+ ID ARE + I DV +Y IL+ G L + M+
Sbjct: 151 NSILDVLVKE-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK 209
Query: 507 ARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXX 566
G+AP + Y TL+ A +G+ A + EM +P + + +N+L+ YC
Sbjct: 210 TSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM-KEP----NDVTFNILISAYCNEQKL 264
Query: 567 XXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
GF PDV T + + EAL EV ER E+
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL----EVLERVES 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 109/545 (20%), Positives = 197/545 (36%), Gaps = 80/545 (14%)
Query: 189 GLFRA-VTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFD-EMPQFGVV 246
G RA + +R+ + D +P FN++L+ D + + F +M G+
Sbjct: 121 GFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIH 179
Query: 247 PDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEII 306
D +Y I+MK +R +L+ + V ++L+ A G + A +
Sbjct: 180 GDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSL 239
Query: 307 VQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPY 366
+ M+E ND F L+ N+ + + +
Sbjct: 240 MSEMKEP-------------------NDVTFNILISAYCNEQKLIQSMVLLEK-CFSLGF 279
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+ T +M+ GRVS+ LE + R + D V+ T+V G M
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEA---LEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A++ EM R G N TYN+L+ GYC +D A + +M DA I+ + ++N LI
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA-IRWNFATFNTLI 395
Query: 487 DGCIL---VDDSAGAL----------------------SFFNE----------MRARGIA 511
G + DD L F+ E ++ +
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P + + + + G +D+M+ + V +I + L+ Y + G
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP-SIIVSHCLIHRYSQHGKIEESLE 514
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
G+ P T+ + G K + ++ ER VP
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER-----------GCVPDT 563
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHAS 691
+ LL+ L CV+ +KA + + M E I P+ + ++ + + + T+ H +
Sbjct: 564 ESYNPLLEEL---CVKGD-IQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK--TAIHVN 617
Query: 692 RARQD 696
+ QD
Sbjct: 618 SSLQD 622
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/490 (19%), Positives = 197/490 (40%), Gaps = 68/490 (13%)
Query: 153 ASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRP 212
A + + M++ G LP + ++ A+ GD VEA + +V +L + V+
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGD-VEAGKVIHSVVIKLGMSSCLRVS----- 219
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
N++L A G+ + F M + D +++N V+ C+ + + V ++
Sbjct: 220 -----NSILAVYAKCGELDFATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGK 332
+ + ++ + + T + L+ Y G D A ++Q M E G
Sbjct: 271 KEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM----------------ETFGIT 314
Query: 333 ND-----SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT---------------PNTRI 372
D ++ L+ N M ++ ++P T + +
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 373 YTTLMK-GYMKSGRVSDTV-------RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
++ +K G++ V +++ LE R+ DS + D ++ ++++ +AG+
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+A ++ M + N IT+N ++ GY K +A +L + M +D ++Q + ++N+
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
+I G I AL F +M+ P ++ +L+ A A K+ + ++
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL--- 551
Query: 545 RVKVDLI--AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
R +D I N L + Y + G D+ T+ S G L G
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET----KDIITWNSLIGGYVLHGSYG 607
Query: 603 EALILWNEVK 612
AL L+N++K
Sbjct: 608 PALALFNQMK 617
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 131/323 (40%), Gaps = 49/323 (15%)
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
+D +F K+L N V ++ + R+ +++ Y K G + +
Sbjct: 180 DDFLFPKILQGCAN-CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
MR +D +++ +V+ A + G + A +++ EM + G+S +T+NIL+ G
Sbjct: 239 FRRMRERD-------VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
Y + + D A +L+++M E I DV ++ +I G I AL F +M G+ P
Sbjct: 292 YNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 513 TKISY-----------------------------------TTLMKAFALSGQPKLAHRVF 537
++ +L+ ++ G+ + A +VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 538 DEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIAL 597
D + N D+ WN ++ GYC+ G P++ T+ + +G
Sbjct: 411 DSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 598 ARKPGEALILWNEVKERWEAGRD 620
GEA+ L+ +++ + R+
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRN 488
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 155/383 (40%), Gaps = 29/383 (7%)
Query: 201 ITDPDVAADSRPDTGAF--NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKL 258
I D DS + F +A++ A + + +LF M + GV+PD + +++
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 259 CCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE------ 312
C + + +++ + C+ +S++A Y G+LD A + MRE
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 313 -----------KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPL 361
K + +++E E G V +L NQ +
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKE--GISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 362 LPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
T + +T ++ G + +G + L+ R+ + P+ V+ + VSA
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGM---RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
+++ +V + ++G + + N L+ Y K +++ AR++ D+ DV +
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF-----DSVKNKDVYT 420
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+N +I G A F M+ + P I++ T++ + +G A +F M
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 542 NDPRVKVDLIAWNMLVEGYCRLG 564
D +V+ + WN+++ GY + G
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNG 503
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 168/421 (39%), Gaps = 55/421 (13%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A +VK M + G P + W+ ++ G A+ L ++K+ + AD
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL-------MQKMETFGITAD-- 316
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLC-CRKDRKDLLVF 270
+ A+++ ++G L +F +M GVVP+A++ + C C K
Sbjct: 317 --VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-------- 366
Query: 271 VLERILE-QNVPLCMTTL------HSLVAAYVDFGDLDTAEIIVQAMREKRRDL----CR 319
V+ + E ++ + M + +SLV Y G L+ A + +++ K D+
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK--DVYTWNSM 424
Query: 320 ILRESNSEYIGGK--------------NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKP 365
I + Y G N + ++ + ++Q
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
NT + ++ GY+++G+ + LE R+ S P+ V+ +++ A
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEA---LELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
R++ + R + A N L Y K I+ +R + M D++++N L
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME-----TKDIITWNSL 596
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G +L AL+ FN+M+ +GI P + + ++++ A L G +VF + ND
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 546 V 546
+
Sbjct: 657 I 657
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 150/362 (41%), Gaps = 71/362 (19%)
Query: 196 RRLRKITDPDVAAD---SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQ-FGVVPDALS 251
R+L +I + AA R +T N+VL AC + G+ + L++F EM + G+ D++S
Sbjct: 56 RQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSIS 115
Query: 252 YNIVMKLCCRKDRKDLLVFVLERI---LEQNVP-LCMTTLHSLVAAYVDFGDLDTAEIIV 307
Y ++K + R D +LE I P L + ++ L+ A ++ GDL A ++
Sbjct: 116 YATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLL 175
Query: 308 QAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYT 367
R D+ LL T
Sbjct: 176 -----ARYDI-------------------------------------------LLLDHGT 187
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ IY LMKGY+ S + +L+ M R PD ++Y T++ A +K G +D A
Sbjct: 188 PSVLIYNLLMKGYVNSESPQAAINLLDEMLRLR---LEPDRLTYNTLIHACIKCGDLDAA 244
Query: 428 RQVLAEMTRIG-------VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+ +M + + +TY L+KG+ + +E+ EM + D
Sbjct: 245 MKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRT 304
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIA-----PTKISYTTLMKAFALSGQPKLAHR 535
++ ++D + ++GAL F E+ R A P Y ++M+AFA+ G +
Sbjct: 305 AFTAVVDAMLKCGSTSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGDYGMVRN 364
Query: 536 VF 537
++
Sbjct: 365 LY 366
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 16/266 (6%)
Query: 313 KRRDLCRILRESNS--EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
+RR L +I+ E + + G N V +L ++ ++ P ++
Sbjct: 54 RRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDS 113
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTT--VVSALVKAGFMDRAR 428
Y T++KG K+ R+ + +MLE + +A P S ++ AL+ AG + RA
Sbjct: 114 ISYATILKGLGKARRIDEAFQMLETIE-YGTAAGTPKLSSSLIYGLLDALINAGDLRRAN 172
Query: 429 QVLAEMTRIGV---SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+LA + + + + + YN+L+KGY A LL EM ++PD ++YN L
Sbjct: 173 GLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLR-LRLEPDRLTYNTL 231
Query: 486 IDGCILVDDSAGALSFFNEMRARG-------IAPTKISYTTLMKAFALSGQPKLAHRVFD 538
I CI D A+ FFN+M+ + + P ++YTTL+K F + +F
Sbjct: 232 IHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFL 291
Query: 539 EMVNDPRVKVDLIAWNMLVEGYCRLG 564
EM V +D A+ +V+ + G
Sbjct: 292 EMKLCENVFIDRTAFTAVVDAMLKCG 317
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ N +Y ++ + + R+ +LE ++ D + ++S KAG +
Sbjct: 70 FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEG---FAARIISLYGKAGMFE 126
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A++V EM + +++N LL Y + D EL E+ I+PD+VSYN L
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I D A++ +E+ +G+ P +++ TL+ + L GQ +L ++ +MV +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV-EKN 245
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
V +D+ +N + G +G PDV ++ + G K EA
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 606 ILWNEV 611
+ E+
Sbjct: 306 AWYKEI 311
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ Y TL+K + + + V +L+ + ++ PD V++ T++ + G +
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEI---ENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++ A+M V+ + TYN L G + + + L E+ ++PDV S+N +I
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASG-LKPDVFSFNAMIR 293
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
G I A +++ E+ G P K ++ L+ A +G + A +F E
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 55/261 (21%)
Query: 209 DSRPDTGAFNAVLNACANSGDGKMFLQLFDEMP-QFGVVPDALSYNIVMKLCCRKDRKDL 267
D + +FNA+L+A S + +LF+E+P + + PD +SYN ++K C KD
Sbjct: 139 DCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPE 198
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
V +L+ I + + + T ++L+ + G + E I M EK ++ +R N+
Sbjct: 199 AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK--NVAIDIRTYNAR 256
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
+G N++ ++L+ + G +K+
Sbjct: 257 LLGLANEAKSKELVN----------------------------------LFGELKA---- 278
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
S PD S+ ++ + G MD A E+ + G ++ T+
Sbjct: 279 --------------SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFA 324
Query: 448 ILLKGYCKQLQIDKARELLRE 468
+LL CK + A EL +E
Sbjct: 325 LLLPAMCKAGDFESAIELFKE 345
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 149/367 (40%), Gaps = 35/367 (9%)
Query: 244 GVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
G D+ +YN +M + + + + +V VLE + + + L M T + A+ + A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKA 248
Query: 304 EIIVQAMREKRRDL------CRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVY 357
I + M++ + + C +L +G + +F K
Sbjct: 249 VGIFELMKKYKFKIGVETINC-LLDSLGRAKLGKEAQVLFDK------------------ 289
Query: 358 QPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSA 417
L + +TPN YT L+ G+ + + + R+ M D PD V++ ++
Sbjct: 290 ----LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM---IDQGLKPDIVAHNVMLEG 342
Query: 418 LVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQP 477
L+++ A ++ M G N +Y I+++ +CKQ ++ A E +M D+ +QP
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSGLQP 401
Query: 478 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVF 537
D Y LI G EM+ +G P +Y L+K A P+ A R++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 538 DEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIAL 597
++M+ + ++ + +NM+++ Y G PD +Y G+
Sbjct: 462 NKMIQN-EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 598 ARKPGEA 604
K EA
Sbjct: 521 EGKSREA 527
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN R YT +++ + K + + + M DS PD YT +++ +D
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMV---DSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L EM G + TYN L+K Q + A + +M ++ EI+P + ++N+++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSIHTFNMIMK 481
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ + + + EM +GI P SYT L++ G+ + A R +EM+ D +K
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML-DKGMK 540
Query: 548 VDLIAWNMLVEGYCRLG 564
LI +N + R G
Sbjct: 541 TPLIDYNKFAADFHRGG 557
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG--FMDRARQV 430
+T MK + + V + E M++ + + T+ L G + + QV
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKK------YKFKIGVETINCLLDSLGRAKLGKEAQV 285
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
L + + + N +TY +LL G+C+ + +A + +M D ++PD+V++N++++G +
Sbjct: 286 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DQGLKPDIVAHNVMLEGLL 344
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
+ A+ F+ M+++G P SYT +++ F + A FD+MV D ++ D
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSGLQPDA 403
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+ L+ G+ G PD TY + +A + P A ++N+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 611 V 611
+
Sbjct: 464 M 464
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y ++ P+ +YT L+ G+ ++ DTV E ++ + PD +Y ++
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV--YELLKEMQEKGHPPDGKTYNALIK 446
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
+ + A ++ +M + + + T+N+++K Y + R + EM + I
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG-IC 505
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
PD SY +LI G I S A + EM +G+ I Y F GQP+ +
Sbjct: 506 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----I 561
Query: 537 FDEMVN 542
F+E+
Sbjct: 562 FEELAQ 567
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 103/275 (37%), Gaps = 23/275 (8%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD A N +L S ++LF M G P+ SY I+++ C++ + +
Sbjct: 330 KPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ +++ + L+ + LDT +++ M+EK
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK------------GHPPD 437
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
GK + KL+ NQ +Y ++ P+ + +MK Y +
Sbjct: 438 GKTYNALIKLMA---NQKMPEHATRIYN-KMIQNEIEPSIHTFNMIMKSYFMARNYEMGR 493
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ E M ++ PD SYT ++ L+ G A + L EM G+ I YN
Sbjct: 494 AVWEEMIKK---GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+ + Q E+ E+A+ A+ + I
Sbjct: 551 ADFHRGGQ----PEIFEELAQRAKFSGKFAAAEIF 581
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 5/242 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ + + L++ + + R + E M++ P Y ++ ALVK G+ D A
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKK---FGFKPRVFLYNRIMDALVKNGYFDLA 247
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
V + G+ T+ IL+KG CK +I++ E+L+ M E+ +PDV +Y +I
Sbjct: 248 LAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIK 306
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ + +L ++EMR I P ++Y TL+ G+ + + +F EM ++
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM-KGKQIL 365
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
+D + +L+EG+ G +G+ D+G Y + G+ + +A L
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 608 WN 609
+
Sbjct: 426 FQ 427
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 121/315 (38%), Gaps = 55/315 (17%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F ++ A++ G ++++M +FG P YN +M + DL + V
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E E + TT LV G ++ I+Q MRE +LC+
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE---NLCK------------ 295
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
P+ YT ++K + G + ++R
Sbjct: 296 ------------------------------------PDVFAYTAMIKTLVSEGNLDASLR 319
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + MRR + PD ++Y T+V L K G ++R ++ EM + +R Y +L++
Sbjct: 320 VWDEMRRDE---IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
G+ ++ A L ++ + I D+ YN +I G V+ A F +
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYI-ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELE 435
Query: 512 PTKISYTTLMKAFAL 526
P + + +M A+ +
Sbjct: 436 PDFETLSPIMVAYVV 450
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 164/422 (38%), Gaps = 52/422 (12%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAA----------DSRPDTG 215
P V A++A++ L S G+ +L ++ + R K PDV A D R + G
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK---PDVMAYGTLVVGLCKDGRVERG 352
Query: 216 -----------------AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKL 258
+ ++ G + L++++ G + D YN V+K
Sbjct: 353 YELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKG 412
Query: 259 CCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLC 318
C ++ D + + +E+ + TL ++ AYV L +++ + E
Sbjct: 413 LCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE------ 466
Query: 319 RILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK 378
L S+Y+ + F KLL ++ V+ +L + +Y LM+
Sbjct: 467 --LGYPVSDYL-----TQFFKLL--CADEEKNAMALDVFY--ILKTKGHGSVSVYNILME 515
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
K G + ++ + MR+ PD SY+ + V+ G + A ++ +
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKL---GFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
+ Y L KG C+ +ID L+RE + E P Y + + ++
Sbjct: 573 CVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKV 632
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN-DPRVKVDLIAW-NML 556
+ +EM G+ ++ Y ++ + G K+A VF E+ + D++ + ML
Sbjct: 633 MKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
Query: 557 VE 558
+E
Sbjct: 693 IE 694
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 148/366 (40%), Gaps = 39/366 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A ++ + ++ SGY+ + ++AV+ L S +A LF+ + + +PD S
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVA---IEEELEPDFETLS- 442
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGV-VPDALSYNIVMKLCCRKDRKDLLVF 270
P A+ V+N ++ F + + + + G V D L+ KL C + K+ +
Sbjct: 443 PIMVAY-VVMNRLSD------FSNVLERIGELGYPVSDYLTQ--FFKLLCADEEKNAMAL 493
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+ IL+ ++ + L+ A GD+ + + MR+ +G
Sbjct: 494 DVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRK----------------LG 537
Query: 331 GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
+ DS + + + ++ P+ Y +L KG + G + D V
Sbjct: 538 FEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI-DAV 596
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
ML + S P Y V + K ++ +V+ EM + GV N + Y ++
Sbjct: 597 -MLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAII 655
Query: 451 KGYCKQLQIDKARELLREMAE-DAEIQPDVVSY-NILIDGC--ILVDDSAGALSFF---N 503
G K I ARE+ E+ + + D+V Y +LI+ D + FF +
Sbjct: 656 SGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLES 715
Query: 504 EMRARG 509
++RA+G
Sbjct: 716 KLRAKG 721
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 149/349 (42%), Gaps = 23/349 (6%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
F ++ +G + F+ M +G VPD ++++IV+ RK R + +
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV 336
++ P + +LV + G++ AE + + M+ + G +V
Sbjct: 249 DRFEPDVIVYT-NLVRGWCRAGEISEAEKVFKEMK-----------------LAGIEPNV 290
Query: 337 FQ-KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEA 395
+ ++ +++ + +L PN + LM+ ++K+GR +++
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
M++ PD ++Y ++ A + ++ A +VL M + N T+N + + K
Sbjct: 351 MKKL---GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 456 QLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKI 515
+ ++ A + +M E A+ +P+ V+YNIL+ + + L EM + + P
Sbjct: 408 KRDVNGAHRMYSKMME-AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVN 466
Query: 516 SYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
+Y L+ F G A+++F EMV + + L + M++ R G
Sbjct: 467 TYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAG 515
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
++T ++ V+AG A M G ++I ++I++ ++ + +A+ +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
+ +PDV+ Y L+ G + + A F EM+ GI P +Y+ ++ A GQ
Sbjct: 248 KD--RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 530 PKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYG 589
AH VF +M+ D + I +N L+ + + G G PD TY
Sbjct: 306 ISRAHDVFADML-DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 148/380 (38%), Gaps = 68/380 (17%)
Query: 163 GYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLN 222
G +P A+S V+S L+ + EA F ++ R PD + ++
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE------------PDVIVYTNLVR 263
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
+G+ ++F EM G+ P+ +Y+IV+ CR +
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ------------------ 305
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLP 342
++ H + A +D G A MR + G+ + V Q +
Sbjct: 306 -ISRAHDVFADMLDSGCAPNAITFNNLMRVHVK--------------AGRTEKVLQ--VY 348
Query: 343 NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
N M + P+T Y L++ + + + + V++L M ++
Sbjct: 349 NQMKKLGCE----------------PDTITYNFLIEAHCRDENLENAVKVLNTMIKK--- 389
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKA 462
+ ++ T+ + K ++ A ++ ++M N +TYNIL++ + D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 463 RELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM-RARGIAPTKISYTTLM 521
++ +EM +D E++P+V +Y +L+ + A F EM + + P+ Y ++
Sbjct: 450 LKMKKEM-DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 522 KAFALSGQPKLAHRVFDEMV 541
+GQ K + ++M+
Sbjct: 509 AQLRRAGQLKKHEELVEKMI 528
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 127/321 (39%), Gaps = 66/321 (20%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V K M +G P+V +S V+ L G A +F + D A
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFA-------DMLDSGCA---- 322
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ FN ++ +G + LQ++++M + G PD ++YN +++ CR + + V V
Sbjct: 323 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L ++++ + +T +++ Y+ EK+RD + G
Sbjct: 383 LNTMIKKKCEVNASTFNTIF-RYI----------------EKKRD------------VNG 413
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ ++ K++ PNT Y LM+ ++ S ++
Sbjct: 414 AH-RMYSKMMEAKCE---------------------PNTVTYNILMRMFVGSKSTDMVLK 451
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT-YNILL 450
M + M DD P+ +Y +V+ G + A ++ EM ++ Y ++L
Sbjct: 452 MKKEM---DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 451 KGYCKQLQIDKARELLREMAE 471
+ Q+ K EL+ +M +
Sbjct: 509 AQLRRAGQLKKHEELVEKMIQ 529
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YN ++ K Q D A L+ ++ + ++ + ++ ILI + ++ A+ FN M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLI-DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G P KI+++ ++ + + A FD + + R + D+I + LV G+CR G
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD--RFEPDVIVYTNLVRGWCRAGE 270
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSD 625
G P+V TY +AL ++ + D +S
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVI----------DALCRCGQISRAHDVFADMLDSG 320
Query: 626 SSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSR 683
+ P+ + L + V+A K L++ M++ G P+ + +E H R
Sbjct: 321 CA-----PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN-FLIEAHCR 372
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 41/370 (11%)
Query: 244 GVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTA 303
G D+ +YN +M + + + + +V VLE + + + L M T + A+ + A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKA 247
Query: 304 EIIVQAMREKRRDL------CRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVY 357
I + M++ + + C +L +G + +F K
Sbjct: 248 VGIFELMKKYKFKIGVETINC-LLDSLGRAKLGKEAQVLFDK------------------ 288
Query: 358 QPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH---PDHVSYTTV 414
L + +TPN YT L+ G+ RV + ++EA R +D H PD V++ +
Sbjct: 289 ----LKERFTPNMMTYTVLLNGWC---RVRN---LIEAARIWNDMIDHGLKPDIVAHNVM 338
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+ L+++ A ++ M G N +Y I+++ +CKQ ++ A E +M D+
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSG 397
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
+QPD Y LI G EM+ +G P +Y L+K A P+
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
R++++M+ + ++ + +NM+++ Y G PD +Y G
Sbjct: 458 RIYNKMIQN-EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 595 IALARKPGEA 604
+ K EA
Sbjct: 517 LISEGKSREA 526
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN R YT +++ + K + + + M DS PD YT +++ +D
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMV---DSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L EM G + TYN L+K Q + + +M ++ EI+P + ++N+++
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSIHTFNMIMK 480
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ + + ++EM +GI P SYT L++ G+ + A R +EM+ D +K
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKGMK 539
Query: 548 VDLIAWNMLVEGYCRLG 564
LI +N + R G
Sbjct: 540 TPLIDYNKFAADFHRGG 556
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG--FMDRARQV 430
+T MK + + V + E M++ + + T+ L G + + QV
Sbjct: 231 FTIAMKAFAAAKERKKAVGIFELMKK------YKFKIGVETINCLLDSLGRAKLGKEAQV 284
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
L + + + N +TY +LL G+C+ + +A + +M D ++PD+V++N++++G +
Sbjct: 285 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGLL 343
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
+ A+ F+ M+++G P SYT +++ F + A FD+MV D ++ D
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSGLQPDA 402
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+ L+ G+ G PD TY + +A + P ++N+
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 611 V 611
+
Sbjct: 463 M 463
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y ++ P+ +YT L+ G+ ++ DTV E ++ + PD +Y ++
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV--YELLKEMQEKGHPPDGKTYNALIK 445
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
+ + ++ +M + + + T+N+++K Y + R + EM + I
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG-IC 504
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
PD SY +LI G I S A + EM +G+ I Y F GQP+ +
Sbjct: 505 PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----I 560
Query: 537 FDEMVN 542
F+E+
Sbjct: 561 FEELAQ 566
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 178/437 (40%), Gaps = 62/437 (14%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A + M +G++P ++ ++ + EA LF + V R
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM-----------VQEGVR 391
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
+N +++ +G + LF ++ + G DA++++IV CR+ + + V +
Sbjct: 392 ASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKL 451
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE------------------- 312
+E + + + + T+ SL+ + G D E +++ +RE
Sbjct: 452 VEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Query: 313 ----KRRDLCRILRESNS-----EYIGGKNDSVFQKLL------PNSMNQSXXXXXXXVY 357
K +D + S +G ++D + + P S +
Sbjct: 512 RPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRN 571
Query: 358 QP-PLL---------PKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPD 407
QP PL KP + + + T + Y+ G +S ++ E + D
Sbjct: 572 QPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIF----NGMGVTD 627
Query: 408 HVSYT--TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
SYT +++S+ VK G+ AR VL +M +A+ TYN++++G K + D A +
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L + + D+V YN LI+ A F+ M++ GI P +SY T+++ +
Sbjct: 688 LDRLTKQGGYL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746
Query: 526 LSGQPKLAHRVFDEMVN 542
+G+ K A++ M++
Sbjct: 747 KAGKLKEAYKYLKAMLD 763
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD---SASHPDHVSYTTVVSALVK 420
K + +T Y + G+ G + + + + M+ + S+ PD +Y +++ L
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCL 301
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G A V E+ G + TY IL++G CK ++D A + EM + + PD +
Sbjct: 302 FGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV-PDTI 360
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
YN L+DG + A F +M G+ + +Y L+ +G+ + +F ++
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
+ VD I ++++ CR G GF D+ T S G +
Sbjct: 421 KKKGQF-VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Query: 601 PGEALILWNEVKE--------RWEAGRDR-----ENSDSSVPPLKPDEG-LLDTLA 642
L ++E RW AG + ++ D P+ P +G LD ++
Sbjct: 480 WDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMS 535
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 31/260 (11%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMT 435
L+ ++SG+ + +L+ M D + Y +V+ ALVK + A +L ++
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPS---VYDSVLIALVKKHELRLALSILFKLL 189
Query: 436 R---------------IGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+ + N LL G + + + + ++ + D
Sbjct: 190 EASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRAR------GIAPTKISYTTLMKAFALSGQPKLAH 534
SYNI I G D ALS F EM+ R P +Y +L+ L G+ K A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 535 RVFDEMV---NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSF 591
V+DE+ ++P D + +L++G C+ NGF PD Y
Sbjct: 310 IVWDELKVSGHEP----DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 592 ANGIALARKPGEALILWNEV 611
+G ARK EA L+ ++
Sbjct: 366 LDGTLKARKVTEACQLFEKM 385
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
T LMK + G V + L R + PD +Y T+++AL + G +AR +L +
Sbjct: 169 TCLMKCLGEEGFVKEA---LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 434 MTRIGVS--ANRITYNILLKGYCK-----------QLQIDKARELLREMAEDAEIQPDVV 480
M G + TY IL+ YC+ + ++ +A + REM + PDVV
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV-PDVV 284
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
+YN LIDGC + AL F +M+ +G P +++Y + ++ ++++ +
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 8/171 (4%)
Query: 366 YTPNTRIYTTLMKGYMKSG-----RVSDTVRMLEAMRRQDD---SASHPDHVSYTTVVSA 417
Y P+T YT L+ Y + G R + RM EA R + PD V+Y ++
Sbjct: 233 YPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDG 292
Query: 418 LVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQP 477
K + RA ++ +M G N++TYN ++ Y +I+ A E++R M + P
Sbjct: 293 CCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP 352
Query: 478 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
+Y LI + +A A EM G+ P + +Y + A + G
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 9/238 (3%)
Query: 214 TGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLE 273
T + ++ G K L F M ++ PD +YN ++ CR F+L+
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 274 RILEQNV--PLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++ P T L+++Y +G + T +A+R + + R+ RE + G
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYG-MQTG--CRKAIRRRMWEANRMFRE--MLFRGF 279
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D V L + ++ + K PN Y + ++ Y + + +
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIE 339
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
M+ M++ P +YT ++ ALV+ AR ++ EM G+ TY ++
Sbjct: 340 MMRTMKKLGHGV--PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 11/246 (4%)
Query: 362 LPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH---PDHVSYTTVVSAL 418
L + +TPN YT L+ G+ RV + ++EA R +D H PD V++ ++ L
Sbjct: 290 LKERFTPNMMTYTVLLNGWC---RVRN---LIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 419 VKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPD 478
+++ A ++ M G N +Y I+++ +CKQ ++ A E +M D+ +QPD
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSGLQPD 402
Query: 479 VVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD 538
Y LI G EM+ +G P +Y L+K A P+ R+++
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 539 EMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALA 598
+M+ + ++ + +NM+++ Y G PD +Y G+
Sbjct: 463 KMIQN-EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 521
Query: 599 RKPGEA 604
K EA
Sbjct: 522 GKSREA 527
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN R YT +++ + K + + + M DS PD YT +++ +D
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMV---DSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L EM G + TYN L+K Q + + +M ++ EI+P + ++N+++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN-EIEPSIHTFNMIMK 481
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+ + + ++EM +GI P SYT L++ G+ + A R +EM+ D +K
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML-DKGMK 540
Query: 548 VDLIAWNMLVEGYCRLG 564
LI +N + R G
Sbjct: 541 TPLIDYNKFAADFHRGG 557
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG--FMDRARQV 430
+T MK + + V + E M++ + + T+ L G + + QV
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKK------YKFKIGVETINCLLDSLGRAKLGKEAQV 285
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
L + + + N +TY +LL G+C+ + +A + +M D ++PD+V++N++++G +
Sbjct: 286 LFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGLL 344
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDL 550
+ A+ F+ M+++G P SYT +++ F + A FD+MV D ++ D
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV-DSGLQPDA 403
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+ L+ G+ G PD TY + +A + P ++N+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 611 V 611
+
Sbjct: 464 M 464
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y ++ P+ +YT L+ G+ ++ DTV E ++ + PD +Y ++
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKL-DTV--YELLKEMQEKGHPPDGKTYNALIK 446
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
+ + ++ +M + + + T+N+++K Y + R + EM + I
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG-IC 505
Query: 477 PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
PD SY +LI G I S A + EM +G+ I Y F GQP+ +
Sbjct: 506 PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE----I 561
Query: 537 FDEMVN 542
F+E+
Sbjct: 562 FEELAQ 567
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 164/387 (42%), Gaps = 47/387 (12%)
Query: 299 DLDTAEIIVQAMR----EKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
DL EI++ +R EK +L R ++ S ++ DS KLL N+
Sbjct: 54 DLAWNEIVMVNLRSGNWEKAVELFREMQFSGAK----AYDSTMVKLLQVCSNKEGFAEGR 109
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
++ +L N + +L+ Y ++G++ + ++ +M+ ++ S S+ ++
Sbjct: 110 QIH-GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS-------SWNSI 161
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
+S+ K G++D A +L EM G+ + +T+N LL GY + A +L+ M + A
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAG 220
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY-----TTLMKAFALSGQ 529
++P S + L+ G L + I ++ Y TTL+ + +G
Sbjct: 221 LKPSTSSISSLLQAVA----EPGHLKLGKAIHGY-ILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 530 PKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYG 589
A VFD M D + +++AWN LV G G PD T+
Sbjct: 276 LPYARMVFDMM--DAK---NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 590 SFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAA 649
S A+G A KP +AL + ++KE+ + P+ + C +
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEK---------------GVAPNVVSWTAIFSGCSKNG 375
Query: 650 FFRKALEIVACMEENGIPPNKTKFTRI 676
FR AL++ M+E G+ PN + +
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTL 402
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/541 (18%), Positives = 204/541 (37%), Gaps = 105/541 (19%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDR----KD 266
+ D A+N ++ SG+ + ++LF EM G + ++++C K+ +
Sbjct: 51 KRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQ 110
Query: 267 LLVFVLERILEQNVPLC---------------------------MTTLHSLVAAYVDFGD 299
+ +VL LE NV +C +++ +S++++Y G
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGY 170
Query: 300 LDTA-----EIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM---NQSXXX 351
+D A E+ + ++ +L S+ + +V +++ + S
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 352 XXXXVYQPP-----------LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQD 400
V +P +L + + TTL+ Y+K+G L R
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG-------YLPYARMVF 283
Query: 401 DSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQID 460
D + V++ ++VS L A + A ++ M + G+ + IT+N L GY + +
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 461 KARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
KA +++ +M E + P+VVS+ + GC + AL F +M+ G+ P + +TL
Sbjct: 344 KALDVIGKMKEKG-VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 521 MKAFAL-----SGQPKLAHRVFDEMVNDPRVKVDLI------------------------ 551
+K SG+ + ++ D V L+
Sbjct: 403 LKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL 462
Query: 552 -AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+WN ++ GY G G PD T+ S +++ + G
Sbjct: 463 ASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSV---LSVCKNSG-------L 512
Query: 611 VKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 670
V+E W+ + +P ++ ++D L R+ + +A + + M + P+
Sbjct: 513 VQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG----RSGYLDEAWDFIQTMS---LKPDA 565
Query: 671 T 671
T
Sbjct: 566 T 566
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 29/258 (11%)
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
G ++ +R+V M N ++N +L Y K +D A LL EM E ++PD+V+
Sbjct: 138 GKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEM-EICGLKPDIVT 192
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+N L+ G S A++ M+ G+ P+ S ++L++A A G KL + ++
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 542 NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALA--R 599
+ ++ D+ L++ Y + G ++ + S +G++ A
Sbjct: 253 RN-QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLL 307
Query: 600 KPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVA 659
K EAL++ E KE +KPD ++LA KAL+++
Sbjct: 308 KDAEALMIRME-KE----------------GIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 660 CMEENGIPPNKTKFTRIY 677
M+E G+ PN +T I+
Sbjct: 351 KMKEKGVAPNVVSWTAIF 368
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 29/342 (8%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
+N ++ A S + +LF+ M +GV PD +YN ++++ D LE++
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 277 EQN-----VPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E +P C ++++++V G L+ AE + + M E +
Sbjct: 568 ETGYVSDCIPYC-----AVISSFVKLGQLNMAEEVYKEMVEYNIE--------------- 607
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
D V +L N+ + Y + N+ IY +L+K Y K G + +
Sbjct: 608 -PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEA 666
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ + + + +PD + +++ + + +A + M + G AN T+ ++L
Sbjct: 667 IYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLC 725
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
Y K + ++A ++ ++M E +I D +SYN ++ L A+ F EM + GI
Sbjct: 726 MYKKNGRFEEATQIAKQMRE-MKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
P ++ +L G K A R +E + +K L W
Sbjct: 785 PDDSTFKSLGTILMKLGMSKKAVRKIEE-IRKKEIKRGLELW 825
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
+Y T++ K+G + A + M G+ +T+N ++ Y Q+ + L++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQ 529
PD +YNILI +D A ++F EM+ G+ P +SY TL+ AF++
Sbjct: 360 K--LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 530 PKLAHRVFDEMVNDPRVKVD 549
+ A + EM +D V++D
Sbjct: 418 VEEAEGLIAEM-DDDNVEID 436
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P + +Y T++ K G A L +M++IG+ + +T I+L+ Y K + KA E
Sbjct: 220 PINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF 279
Query: 466 LR-----EMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
+ E D+ + +YN +ID A F M GI PT +++ T+
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTM 339
Query: 521 MKAFALSGQ 529
+ + +GQ
Sbjct: 340 IHIYGNNGQ 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y + Y + Y ++ ++K G+++ + + M + PD V Y +++
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN---IEPDVVVYGVLIN 618
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
A G + +A + M G+ N + YN L+K Y K +D+A + R++ +
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 477 --PDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
PDV + N +I+ A + F+ M+ RG A + ++ ++ + +G+ + A
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGRFEEAT 737
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFA 592
++ +M + ++ D +++N ++ + G +G PD T+ S
Sbjct: 738 QIAKQM-REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 8/253 (3%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L + P T + T++ Y +G++ + +++ M+ PD +Y ++S K
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH----CAPDTRTYNILISLHTK 379
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
++RA EM G+ + ++Y LL + + +++A L+ EM +D ++ D
Sbjct: 380 NNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM-DDDNVEIDEY 438
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+ + L + + + S+F G ++ Y+ + A+ G A RVF +
Sbjct: 439 TQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVF--I 495
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
K +I +N++++ Y G PD TY + +A A
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 601 PGEALILWNEVKE 613
P + +++E
Sbjct: 556 PHKGRCYLEKMRE 568
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 151/392 (38%), Gaps = 69/392 (17%)
Query: 171 WSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGDG 230
+ ++ +G +A+ +F +T + D + N ++N ++G+
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKIT-----------SFDCVRTIQSLNTLINVLVDNGEL 167
Query: 231 KMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSL 290
+ FD + P+++S+NI++K K + V + +LE V + T +SL
Sbjct: 168 EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 291 VAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXX 350
+ D+ A+ +++ M
Sbjct: 228 IGFLCRNDDMGKAKSLLEDM---------------------------------------- 247
Query: 351 XXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVS 410
+ K PN + LMKG G ++ +++ M + P V+
Sbjct: 248 -----------IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR---GCKPGLVN 293
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
Y ++S L K G +D A+ +L EM + + + + YNIL+ C + ++ +A +L EM
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
+P+ +Y ++IDG ++D L+ N M A PT ++ ++ G
Sbjct: 354 MKG-CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN- 411
Query: 531 KLAHRVFD-EMVNDPRVKVDLIAWNMLVEGYC 561
L H F E++ + AW L+ C
Sbjct: 412 -LDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN+ + L+KG++ ++ + M + P V+Y +++ L + M +A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEME---VQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ +L +M + + N +T+ +L+KG C + + ++A++L+ +M E +P +V+Y IL+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM-EYRGCKPGLVNYGILMS 299
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
A EM+ R I P + Y L+ + A+RV EM K
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM-QMKGCK 358
Query: 548 VDLIAWNMLVEGYCRL 563
+ + M+++G+CR+
Sbjct: 359 PNAATYRMMIDGFCRI 374
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 5/241 (2%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ L++ Y K+G V + + + D + S T+++ LV G +++A+
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQ---SLNTLINVLVDNGELEKAKSFF 174
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
+ + N +++NIL+KG+ + + A ++ EM E E+QP VV+YN LI
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE-MEVQPSVVTYNSLIGFLCR 233
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
DD A S +M + I P +++ LMK G+ A ++ +M K L+
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM-EYRGCKPGLV 292
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
+ +L+ + G PDV Y N + + EA + E+
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 612 K 612
+
Sbjct: 353 Q 353
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 2/191 (1%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P+ VS+ ++ + + A +V EM + V + +TYN L+ C+ + KA+ L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L +M + I+P+ V++ +L+ G + A +M RG P ++Y LM
Sbjct: 244 LEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDV 585
G+ A + EM R+K D++ +N+LV C G P+
Sbjct: 303 KRGRIDEAKLLLGEM-KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 586 GTYGSFANGIA 596
TY +G
Sbjct: 362 ATYRMMIDGFC 372
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 117/274 (42%), Gaps = 18/274 (6%)
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
+ ++ KAG +D+A V ++T + N L+ +++KA+ + A
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF-DGA 177
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
+D ++P+ VS+NILI G + D A F+EM + P+ ++Y +L+ +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 531 KLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
A + ++M+ R++ + + + +L++G C G G P + YG
Sbjct: 238 GKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 591 FANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAF 650
+ + + EA +L E+K+R +KPD + + L +
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKR---------------RIKPDVVIYNILVNHLCTECR 341
Query: 651 FRKALEIVACMEENGIPPNKTKFTRIYVEMHSRM 684
+A ++ M+ G PN + R+ ++ R+
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATY-RMMIDGFCRI 374
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 362 LPKPYTP-NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+P+ P + ++ L++ Y K+G V ++V++ + M+ D SY ++ +++
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK---DLGVERTIKSYNSLFKVILR 232
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G A++ +M GV R TYN++L G+ L+++ A +M I PD
Sbjct: 233 RGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG-ISPDDA 291
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++N +I+G A F EM+ I P+ +SYTT++K + + R+F+EM
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLG 564
++ + ++ L+ G C G
Sbjct: 352 -RSSGIEPNATTYSTLLPGLCDAG 374
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y +L K ++ GR R M + P +Y ++ + ++ A +
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSE---GVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+M G+S + T+N ++ G+C+ ++D+A +L EM + +I P VVSY +I G + V
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN-KIGPSVVSYTTMIKGYLAV 338
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
D L F EMR+ GI P +Y+TL+ +G+ A + M+
Sbjct: 339 DRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMM 387
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D + ++ + KAG + + ++ +M +GV +YN L K ++ + A+
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAL 526
+M + ++P +YN+++ G L AL FF +M+ RGI+P ++ T++ F
Sbjct: 244 NKMVSEG-VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 527 SGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVG 586
+ A ++F EM + ++ ++++ +++GY + +G P+
Sbjct: 303 FKKMDEAEKLFVEMKGN-KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNAT 361
Query: 587 TYGSFANGIALARKPGEA 604
TY + G+ A K EA
Sbjct: 362 TYSTLLPGLCDAGKMVEA 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 160/423 (37%), Gaps = 68/423 (16%)
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
D F ++ + +G + +++F +M GV SYN + K+ R+ R +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGK 332
+++ + V T + ++ + L+TA + M K R +
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM--KTRGIS-------------P 288
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
+D+ F ++ N + + P+ YTT++KGY+ RV D +R+
Sbjct: 289 DDATFNTMI-NGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALV--------------------------------- 419
E MR S P+ +Y+T++ L
Sbjct: 348 FEEMR---SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLV 404
Query: 420 ---KAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA--- 473
KAG M A +VL M + V A Y +L++ CK ++A +LL + E
Sbjct: 405 SQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIIL 464
Query: 474 ------EIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALS 527
E++P +YN +I+ +A A F ++ RG+ + L++ A
Sbjct: 465 RHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKE 521
Query: 528 GQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
G P ++ + ++++ V + A+ +L++ Y G +G PD
Sbjct: 522 GNPDSSYEIL-KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSL 580
Query: 588 YGS 590
+ S
Sbjct: 581 FRS 583
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 29/351 (8%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD FN ++N +LF EM + P +SY ++K DR D + +
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
E + + TT +L+ D G + A+ I++ M K +I
Sbjct: 348 FEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK--------------HIAP 393
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQP-PLLPKPYTPNTRIYTTLMKGYMKSGRVSDTV 390
K++S+F KLL + V + L P Y L++ K+ + +
Sbjct: 394 KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGH--YGVLIENQCKASAYNRAI 451
Query: 391 RMLEAMRRQDDSASHPDHV-----SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
++L+ + ++ H D + +Y ++ L G +A + ++ + GV ++
Sbjct: 452 KLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDA 510
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
N L++G+ K+ D + E+L+ M+ + + +Y +LI + + A + + M
Sbjct: 511 LNNLIRGHAKEGNPDSSYEILKIMSRRG-VPRESNAYELLIKSYMSKGEPGDAKTALDSM 569
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV----DLIA 552
G P + +++++ G+ + A RV M+ D V + DLIA
Sbjct: 570 VEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMI-DKNVGIEDNMDLIA 619
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 26/323 (8%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
L +F++M + G DA +YNI+++ C R DL + + ++E+ + + T L+
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXX 353
+D +VQ++ + D+ RI S + G L S S
Sbjct: 304 IAKSEKVD----VVQSIAD---DMVRICEISEHDAFG---------YLLKSFCVSGKIKE 347
Query: 354 XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQ--DDSASHPDHVSY 411
L K + + + L+KG ++ R+ D + +++ M+R+ DDS Y
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV------Y 401
Query: 412 TTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE 471
++S ++ + +A + + + G TY +++ K Q +K L EM E
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 472 DAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPK 531
+ I+PD V+ ++ G + + A A F+ M +GI PT SY+ +K S +
Sbjct: 462 NG-IEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 532 LAHRVFDEM-VNDPRVKVDLIAW 553
++F++M + ++ D+ +W
Sbjct: 521 EIIKIFNQMHASKIVIRDDIFSW 543
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 19/279 (6%)
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
+Q D SH + Y T++S +A +D ++++EM + G + T+ IL+ Y K
Sbjct: 180 KQKDGFSHRVGI-YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+I K + +M + + D +YNI+I + AL F+ EM +GI +Y
Sbjct: 239 KIGKGLLVFEKMRKSG-FELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY 297
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
L+ A S + + + D+MV + + A+ L++ +C G
Sbjct: 298 KMLLDCIAKSEKVDVVQSIADDMVRICEIS-EHDAFGYLLKSFCVSGKIKEALELIRELK 356
Query: 578 XNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGL 637
D + G+ A + +AL + + +K R+ DS+V +
Sbjct: 357 NKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR-------RKLDDSNVYGI------ 403
Query: 638 LDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
+ +R KALE ++++G PP + +T I
Sbjct: 404 ---IISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 11/236 (4%)
Query: 382 KSGR-VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVS 440
K GR V + R M R S PD + L + G A+ L + +IG
Sbjct: 761 KKGRNVEEATRTFREMIR---SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFP 817
Query: 441 ANRITYNILLKGYCKQLQIDKARELLREMA--EDAEIQPDVVSYNILIDGCILVDDSAGA 498
+ Y+I ++ C+ I K E L E+A E D +Y ++ G + D A
Sbjct: 818 VT-VAYSIYIRALCR---IGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA 873
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
L N M+ G P YT+L+ F Q + +M + + ++ + ++
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGES-CEPSVVTYTAMIC 932
Query: 559 GYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
GY LG G PD TY F N + A K +AL L +E+ ++
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDK 988
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 149/386 (38%), Gaps = 56/386 (14%)
Query: 161 RSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAV 220
R+GY + +A++ + D + LF + R+ IT DT A +
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLIT---------QDTWAI--M 719
Query: 221 LNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV----------- 269
+ +G + ++ F EM G++P + ++ ++ + C K +++
Sbjct: 720 IMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRS 779
Query: 270 -FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEI-IVQAMREKRRDLCRILRESNSE 327
FV +R L Q+ C+ + + A L + A R LCRI
Sbjct: 780 GFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRI------- 832
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
GK + +L +S L YT Y +++ G ++ G
Sbjct: 833 ---GKLEEALSELASFEGERS-------------LLDQYT-----YGSIVHGLLQRG--- 868
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
D + L+ + + + P YT+++ K +++ + +M + +TY
Sbjct: 869 DLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT 928
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
++ GY ++++A R M E PD +Y+ I+ S AL +EM
Sbjct: 929 AMICGYMSLGKVEEAWNAFRNMEERG-TSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLA 533
+GIAP+ I++ T+ G+ LA
Sbjct: 988 KGIAPSTINFRTVFYGLNREGKHDLA 1013
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 6/249 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN + ++M + + G R+ M +++ P+ SY ++ A G M A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREM--EEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+V EM GV + + YN ++ G C ++ KA+EL R+M I+ ++Y L++
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG-IECTCLTYEHLVN 359
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA--LSGQPKL-AHRVFDEMVNDP 544
G D L + EM+ +G ++ L++ GQ + A + + V +
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREA 419
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
+ +LV+ C G GF P TY +F +G + +
Sbjct: 420 MFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETS 479
Query: 605 LILWNEVKE 613
+L E+ E
Sbjct: 480 ALLAIEMAE 488
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+D A++++ + + N T+N ++ + ++ + + + REM E+ P+V SYN
Sbjct: 231 VDEAKKMIGK-----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+L++ + A + EM+ RG+ ++Y T++ + + A +F +M
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM-GL 344
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
++ + + LV GYC+ G GF D T + G+
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 177/424 (41%), Gaps = 66/424 (15%)
Query: 168 VKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
V W+ V++ GD EA LF V DSR + + A+++ S
Sbjct: 77 VVTWTHVITGYIKLGDMREARELFDRV--------------DSRKNVVTWTAMVSGYLRS 122
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
+ LF EMP+ VV S+N ++ + R D + + + + E+N+ +
Sbjct: 123 KQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPERNI----VSW 174
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQ 347
+S+V A V G +D A + + M RRD+ + GK D ++L
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERM--PRRDVVSWTAMVDGLAKNGKVDEA-RRLFD----- 226
Query: 348 SXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPD 407
+P+ N + ++ GY ++ R+ + ++ + M +D
Sbjct: 227 -------------CMPER---NIISWNAMITGYAQNNRIDEADQLFQVMPERD------- 263
Query: 408 HVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLR 467
S+ T+++ ++ M++A + M N I++ ++ GY + + ++A +
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFS 319
Query: 468 EMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF--FNEMRARGI-APTKISYTTLMKAF 524
+M D ++P+V +Y ++ C D AG + +++ ++ + +I + L+ +
Sbjct: 320 KMLRDGSVKPNVGTYVSILSAC---SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
+ SG+ A ++FD N + DLI+WN ++ Y G +GF P
Sbjct: 377 SKSGELIAARKMFD---NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 585 VGTY 588
TY
Sbjct: 434 AVTY 437
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 51/313 (16%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAY 294
+LFD +P+ VV +KL ++ ++L V R +NV T ++V+ Y
Sbjct: 67 KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNV----VTWTAMVSGY 119
Query: 295 VDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXX 354
+ L AE++ Q M E R + N+ G K L
Sbjct: 120 LRSKQLSIAEMLFQEMPE------RNVVSWNTMIDGYAQSGRIDKALE------------ 161
Query: 355 XVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
L + N + +++K ++ GR+ + + + E M R+D VS+T +
Sbjct: 162 ------LFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD-------VVSWTAM 208
Query: 415 VSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
V L K G +D AR++ M N I++N ++ GY + +ID+A +L + M E
Sbjct: 209 VDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPE--- 261
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
D S+N +I G I + A F+ M + + IS+TT++ + + + + A
Sbjct: 262 --RDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEAL 315
Query: 535 RVFDEMVNDPRVK 547
VF +M+ D VK
Sbjct: 316 NVFSKMLRDGSVK 328
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K P+ Y +L+ Y K + ++++ MR ++++ PD ++YTTV+ L G
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET---PDVITYTTVIGGLGLIGQ 296
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
D+AR+VL EM G + YN ++ +C ++ A +L+ EM + + P+ +YN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG-LSPNATTYN 355
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+ L +D + + M P S L+K F + +A R++++MV
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+N LL+ C++ + AR + + + QPD+ ++NIL+ G S A +FF EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKH--QFQPDLQTFNILLSGW---KSSEEAEAFFEEM 237
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
+ +G+ P ++Y +L+ + + + A+++ D+M + D+I + ++ G +G
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP-DVITYTTVIGGLGLIGQ 296
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
G +PDV Y + +AR+ G+A L +E+ ++
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 125/280 (44%), Gaps = 5/280 (1%)
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
KLL S+ + +L K TRIY ++G ++ + +L +M +
Sbjct: 381 KLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQ 440
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM-TRIGVSANRITYNILLKGYCKQL 457
D PD + TV++ L K G +D A +VL +M T + + +T N ++ G Q
Sbjct: 441 GD---CRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+ ++A ++L + + +I+P VV+YN +I G + A+S F ++ + +Y
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXX 577
++ ++ + +A + +D+++ P + D + ++G C+ G
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIW-PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLA 616
Query: 578 XNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
+G P+V Y + + + EA + E+++ +A
Sbjct: 617 DSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 110/585 (18%), Positives = 216/585 (36%), Gaps = 87/585 (14%)
Query: 159 MLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFN 218
L SG++P + + +++RL S V LG V RL V P +N
Sbjct: 116 FLASGFIPDERTCNVIIARLLYSRSPVSTLG----VIHRLIGFKKEFV-----PSLTNYN 166
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++N +L +M G +PD +++ ++ C ++ V + +
Sbjct: 167 RLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVC 226
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
+ TL L+ ++ D++T +++ + E ++ E+++ + F
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN------ETDTSM----KAAAFA 276
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L+ + + + + L + Y ++ + R R++ M+
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+ P SY ++ L K G RA Q+L E + + TY +L++ CK+L
Sbjct: 336 K---GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 459 IDKARELLREMAE----------------------------------DAEIQPDVVSYNI 484
KAR +L M + +PD + N
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 485 LIDG-CIL--VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+I+G C + VDD+ L + M + AP ++ T+M G+ + A V + ++
Sbjct: 453 VINGLCKMGRVDDAMKVLD--DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 542 NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
+ ++K ++A+N ++ G +L D TY +G+ + K
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 602 GEALILWNEVKERWEAGRDRENS----------------------DSSVPPLKPDEGLLD 639
A W++V W +GR D + P+ +
Sbjct: 571 DMAKKFWDDVI--WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYN 628
Query: 640 TLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRM 684
T+ C R+ R+A +I+ M +NG P+ + RI ++H M
Sbjct: 629 TVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW-RILDKLHDSM 672
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 149/415 (35%), Gaps = 68/415 (16%)
Query: 153 ASVVKSMLRSGYLPHVKAWSAVVSRLASS------GDSVEALGLFRAVTRRLRKITDPDV 206
A++V SM R GY + + +S S G +++L +R +I
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRR-NHGAARIVYIMK 334
Query: 207 AADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRK---- 262
+ +P ++NA+++ G QL +E +F P +Y ++M+ C++
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 263 DRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILR 322
+++L +L + + L L +D I+ + + CR
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCV-------MDNPTEILNVLVSMLQGDCR--- 444
Query: 323 ESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMK 382
++ ++ V + K P+ T+M G +
Sbjct: 445 ---------PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLA 495
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
GR + + +L R ++ P V+Y V+ L K D A V ++ + V+A+
Sbjct: 496 QGRAEEALDVLN--RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 443 RITYNILLKGYCKQLQIDKAREL-----------------------------------LR 467
TY I++ G C ++D A++ L
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 468 EMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMK 522
++A+ I P+VV YN +I C A EMR G AP +++ L K
Sbjct: 614 DLADSGAI-PNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 150/360 (41%), Gaps = 38/360 (10%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDR-----K 265
+P A+N +++ G K L L M G D + ++V+K + +
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 266 DLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESN 325
L V RI++ +V L + +LV YV G L++A + + M+++ C
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC------- 209
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
++ MNQ ++ + + +Y +++G+ +SG
Sbjct: 210 ------------TSMISGYMNQGFVEDAEEIFNTTKV-----KDIVVYNAMVEGFSRSGE 252
Query: 386 VSD-TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
+ +V M +M+R + HP+ ++ +V+ A + +QV A++ + GV +
Sbjct: 253 TAKRSVDMYISMQR---AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIK 309
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
+ LL Y K I+ AR + +M E +V S+ +IDG + AL F
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQMQE-----KNVFSWTSMIDGYGKNGNPEEALELFTR 364
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
M+ I P +++ + A + SG + +F+ M D +K + + +V+ R G
Sbjct: 365 MKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAG 424
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 163/388 (42%), Gaps = 46/388 (11%)
Query: 171 WSAVVSRLASSGDSVEALGLF-----------RAVTRRLRKITDPDVA---ADSRPDTG- 215
W+ ++S G+ EA LF + K+ D + A D P+
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV 229
Query: 216 -AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
++NA+L+ A +G + L+LF++M + GV P+ ++ IV+ C + L +++
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
I E+ V L +L+ + D+ +A I + +R + S IG D
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIG---D 346
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
+ L ++M PK N + +L+ GY +G+ + + E
Sbjct: 347 MSSARQLFDTM-----------------PKR---NVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
M DS PD V+ +V+SA ++ ++ + + + N Y L+ Y
Sbjct: 387 DMIDYGDS--KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 455 KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK 514
+ + +A+ + EM E DVVSYN L D L+ ++M+ GI P +
Sbjct: 445 RGGNLWEAKRVFDEMKE-----RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDR 499
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMVN 542
++YT+++ A +G K R+F + N
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 182/452 (40%), Gaps = 52/452 (11%)
Query: 160 LRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNA 219
LR +L +K SA+ L+S G +GL D+ AD
Sbjct: 90 LRGVFLQKLKGKSAIQKSLSSLG-----IGL------------SIDIVAD---------- 122
Query: 220 VLNACANSGDGKMFLQLFD-EMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
VLN SG+ + FD + + GV D SY+++++ R+ ++ VL+ ++ +
Sbjct: 123 VLNRGNLSGEA--MVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCE 180
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
V L L A F + V +R + ES S + +S F
Sbjct: 181 GVN---PDLECLTIAMDSF-------VRVHYVRRA----IELFEESESFGVKCSTES-FN 225
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
LL +S V+ P+ + Y ++ G+ K G V + ++L+ M
Sbjct: 226 ALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS--YNIMISGWSKLGEVEEMEKVLKEMV- 282
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+S PD +SY+ ++ L + G ++ + ++ + G + YN ++ +
Sbjct: 283 --ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
D++ R M D E +P++ +Y+ L+ G I + AL F EM +RG+ PT T
Sbjct: 341 FDESMRYYRRML-DEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 519 TLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
+ +K G P A ++ + ++ A+ +L++ R G
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKS-RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 458
Query: 579 NGFHPDVGTYGSFANGIALARKPGEALILWNE 610
+G+ DV Y +G+ + A+++ E
Sbjct: 459 SGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
M++ ++ +PD T + + V+ ++ RA ++ E GV + ++N LL+
Sbjct: 170 MMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLR 229
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
C++ + A+ + A+ I D SYNI+I G + + EM G
Sbjct: 230 CLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFG 287
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
P +SY+ L++ +G+ + +FD + + V D +N ++ +
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP-DANVYNAMICNFISARDFDESMR 346
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
P++ TY +G+ RK +AL ++ E+ R
Sbjct: 347 YYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 26/324 (8%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAA 293
++LF+E FGV S+N +++ C + V + N+P + + +++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISG 264
Query: 294 YVDFGDLDTAEIIVQAMREKR------------RDLCRILRESNSEYI-------GGKND 334
+ G+++ E +++ M E L R R ++S I G D
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 335 S-VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRML 393
+ V+ ++ N ++ Y+ +L + PN Y+ L+ G +K +VSD + +
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRR-MLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
E M + P T+ + L G A + + + G + Y +LLK
Sbjct: 384 EEMLSR---GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
+ + + EM E DV Y ++DG ++ A+ E +G P
Sbjct: 441 SRFGKCGMLLNVWDEMQESG-YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 514 KISYTTLMKAFALSGQPKLAHRVF 537
+ Y+ L S + +LA+++F
Sbjct: 500 RFVYSRLSSKLMASNKTELAYKLF 523
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+Y+ ++ ++ + S +L+ ++ DD S D V ++ +G + A ++
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSE-DFVIRIMLLYGY--SGMAEHAHKLF 145
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
EM + ++N LL Y ++D+A + +E+ E I PD+V+YN +I
Sbjct: 146 DEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR 205
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
LS F E+ G P IS+ TL++ F R++D ++ + ++
Sbjct: 206 KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD-LMKSKNLSPNIR 264
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
++N V G R G PDV TY + + E + +NE+
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 612 KER 614
KE+
Sbjct: 325 KEK 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 55/254 (21%)
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMPQ-FGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+FNA+L+A NS ++ F E+P+ G+ PD ++YN ++K CRK D ++ + E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND 334
+ + + + ++L+ + RR+L ++ G D
Sbjct: 219 LEKNGFEPDLISFNTLLEEFY------------------RREL----------FVEG--D 248
Query: 335 SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLE 394
++ L S N S PN R Y + ++G ++ + +D + +++
Sbjct: 249 RIWD--LMKSKNLS-------------------PNIRSYNSRVRGLTRNKKFTDALNLID 287
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYC 454
M+ + S PD +Y +++A ++ + EM G++ + +TY +L+ C
Sbjct: 288 VMKTEGIS---PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLC 344
Query: 455 KQLQIDKARELLRE 468
K+ +D+A E+ E
Sbjct: 345 KKGDLDRAVEVSEE 358
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
TP+ Y T++K + G + D + + E + + + PD +S+ T++ +
Sbjct: 190 TPDLVTYNTMIKALCRKGSMDDILSIFEELEK---NGFEPDLISFNTLLEEFYRRELFVE 246
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
++ M +S N +YN ++G + + A L+ M + I PDV +YN LI
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG-ISPDVHTYNALI 305
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+ ++ + +NEM+ +G+ P ++Y L+ G A V +E +
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 23/248 (9%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L + P +YT L+ Y +S + D +L+ M+ PD +Y+T++ A V
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK--SFPQCQPDVFTYSTLLKACVD 207
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
A D + EM ++ N +T NI+L GY + + D+ ++L +M +PDV
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 481 SYNILIDGCILVDDSAGAL----SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV 536
+ NI++ V + G + S++ + R GI P ++ L+ ++ R+
Sbjct: 268 TMNIILS----VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG-------KKRM 316
Query: 537 FDEM--VNDPRVKVDL----IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
+D+M V + K++ +N ++E + +G G D T+
Sbjct: 317 YDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCC 376
Query: 591 FANGIALA 598
NG A A
Sbjct: 377 LINGYANA 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
P +Y ++ L K+G +RA+++ EM G+ Y LL Y + ID A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
+L +M + QPDV +Y+ L+ C+ S + EM R I P ++ ++ +
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
G+ +V +M+ K D+ N+++ + +G G P+
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 585 -------VGTYG 589
+G+YG
Sbjct: 301 TRTFNILIGSYG 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 37/247 (14%)
Query: 201 ITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCC 260
++D V+ +PD N +L+ N G M +++ FG+ P+ ++NI++
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 261 RKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREK-----RR 315
+K D + V+E + + P +T ++++ A+ D GD E+ MR + +
Sbjct: 313 KKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTK 372
Query: 316 DLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTP-NTRIYT 374
C ++ G N +F K++ + L K P NT Y
Sbjct: 373 TFCCLIN-------GYANAGLFHKVISSVQ---------------LAAKFEIPENTAFYN 410
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAG------FMDRAR 428
++ + D + M R + D ++ +V A K G ++++ R
Sbjct: 411 AVISA---CAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQER 467
Query: 429 QVLAEMT 435
Q L + T
Sbjct: 468 QKLMDRT 474
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/652 (19%), Positives = 245/652 (37%), Gaps = 151/652 (23%)
Query: 156 VKSMLRSGYLPHVK------------AWSAVVSRLASSGDSVEALGLFRAVTRRLRKITD 203
+ M+RSGY+ + W+ ++S + +A LF + +R
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR------ 100
Query: 204 PDVAADSRPDTGAFNAVLNACANSGDGKMFLQ----LFDEMPQFGVVPDALSYNIVMKLC 259
D +N +++ + G G FL+ LFDEMP D+ S+N ++
Sbjct: 101 ---------DVVTWNTMISGYVSCG-GIRFLEEARKLFDEMPS----RDSFSWNTMISGY 146
Query: 260 CRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD-LC 318
+ R + + E++ E+N + +++ + G++D+A ++ + M K LC
Sbjct: 147 AKNRRIGEALLLFEKMPERNA----VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLC 202
Query: 319 RIL-------RESNSEYIGGKNDSV----------FQKLLPNSMNQSXXXXXXXVY-QPP 360
++ R S + ++ G+ S+ + L+ + ++ Q P
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Query: 361 LLP---------KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSY 411
L + + N + +++K Y+K G V + + M+ +D +S+
Sbjct: 263 DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT-------ISW 315
Query: 412 TTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE 471
T++ V M+ A + +EM + + ++N+++ GY ++ AR + E
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYFEKTPE 371
Query: 472 DAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA-------- 523
VS+N +I D A+ F M G P + T+L+ A
Sbjct: 372 -----KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 524 --------------------------FALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
++ G+ + R+FDEM ++K ++I WN ++
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM----KLKREVITWNAMI 482
Query: 558 EGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEA 617
GY G NG +P T+ S N A A EA + + ++
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 618 GRDRENSDSSVP------------------PLKPDEGLLDTLADIC---VRAAFFRKALE 656
E+ S V P +PD+ + L D C A E
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAE 602
Query: 657 IVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRAR---QDRRVERKRAA 705
++ +E P + T + +Y M++ M AS+ R + +R++++R +
Sbjct: 603 AMSRLE----PESSTPYVLLY-NMYADMGLWDEASQVRMNMESKRIKKERGS 649
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 34/313 (10%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N +YT L+ Y +SGR +LE M+ + PD +Y+ ++ + ++ D+ +
Sbjct: 184 NHEVYTALVSAYSRSGRFDAAFTLLERMKSSHN--CQPDVHTYSILIKSFLQVFAFDKVQ 241
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI-- 486
+L++M R G+ N ITYN L+ Y K + L +M + + +PD + N +
Sbjct: 242 DLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRA 301
Query: 487 ---DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
+G I + ++ + + ++ GI P ++ L+ ++ SG K V + M
Sbjct: 302 FGGNGQIEMMENC-----YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM-QK 355
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP-- 601
++ +N++++ + R G P T S A K
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Query: 602 -GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVAC 660
G L R ENSD ++ D + L D R F + ++
Sbjct: 416 IGGVL-------------RFIENSD-----IRLDLVFFNCLVDAYGRMEKFAEMKGVLEL 457
Query: 661 MEENGIPPNKTKF 673
ME+ G P+K +
Sbjct: 458 MEKKGFKPDKITY 470
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT Y TL+ Y K+ + L M +DD PD + + + A G ++
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDD--CKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ G+ N T+NILL Y K K ++ E + +V+YN++ID
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM-EYMQKYHYSWTIVTYNVVID 370
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
D F M++ I P+ ++ +L++A+ + + V + + ++
Sbjct: 371 AFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL-RFIENSDIR 429
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
+DL+ +N LV+ Y R+ GF PD TY
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITY 470
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN R + L+ Y KSG ++E M++ S + V+Y V+ A +AG + +
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI---VTYNVVIDAFGRAGDLKQM 381
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ M + + +T L++ Y + + DK +LR E+++I+ D+V +N L+D
Sbjct: 382 EYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR-FIENSDIRLDLVFFNCLVD 440
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
++ A M +G P KI+Y T++KA+ +SG
Sbjct: 441 AYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 2/204 (0%)
Query: 385 RVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRI 444
R +++ E +R Q P+ Y ++ L K ++A ++ EM G N
Sbjct: 129 RWESAIQVFELLREQ--LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHE 186
Query: 445 TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNE 504
Y L+ Y + + D A LL M QPDV +Y+ILI + V ++
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 505 MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
MR +GI P I+Y TL+ A+ + +M+ + K D N + + G
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 565 XXXXXXXXXXXXXXNGFHPDVGTY 588
+G P++ T+
Sbjct: 307 QIEMMENCYEKFQSSGIEPNIRTF 330
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 156/359 (43%), Gaps = 25/359 (6%)
Query: 208 ADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDL 267
A P A+N VL + + LFDEM Q + PD +Y+ ++ ++ D
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+ L+++ + V + +L+ D A I R KR + L NS
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFS--RLKRSGITPDLVAYNSM 266
Query: 328 YIGGKNDSVFQ--KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+F+ +LL MN++ PNT Y+TL+ Y+++ +
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVL----------------PNTVSYSTLLSVYVENHK 310
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + + M+ + + D + ++ + + A ++ + ++ + N ++
Sbjct: 311 FLEALSVFAEMKEVNCAL---DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 367
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YN +L+ Y + +A L R M + +I+ +VV+YN +I + A + EM
Sbjct: 368 YNTILRVYGEAELFGEAIHLFRLM-QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
++RGI P I+Y+T++ + +G+ A +F ++ V++D + + ++ Y R+G
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-RSSGVEIDQVLYQTMIVAYERVG 484
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
LL + E+A+ P V +YN+++ + A F+EMR R +AP + +Y+TL+ +F
Sbjct: 141 LLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF 200
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
G A +M D RV DL+ ++ L+E RL +G PD
Sbjct: 201 GKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPD 259
Query: 585 VGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADI 644
+ Y S N A+ EA +L +KE EAG + P+ TL +
Sbjct: 260 LVAYNSMINVYGKAKLFREARLL---IKEMNEAG------------VLPNTVSYSTLLSV 304
Query: 645 CVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASR 692
V F +AL + A M+E + T I ++++ ++ K A R
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTT-CNIMIDVYGQLDMVKEADR 351
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 2/230 (0%)
Query: 383 SGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
S R+ D + + R S PD V+Y ++++ KA AR ++ EM GV N
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 443 RITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFF 502
++Y+ LL Y + + +A + EM E D+ + NI+ID +D A F
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKE-VNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+R I P +SY T+++ + + A +F ++ ++ +++ +N +++ Y +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF-RLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 563 LGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVK 612
G P+ TY + + A K A L+ +++
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 462
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 150/358 (41%), Gaps = 32/358 (8%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ + + PN + +++ ++G VS+ +++ M S S ++ +VS +
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVN---VWSMLVSGFFR 259
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+G +A + +M +IG S N +TY L+KG+ +D+A +L ++ + + PD+V
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG-LAPDIV 318
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
N++I + A F + R + P + ++ +++ + LSG+ L R+ +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
D DL+ N+L + ++G F D TY + + +
Sbjct: 379 GTD----FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 601 PGEALILWNEV---KERWEAGRDRENSDSSVPPLKPDEGL------------LDTLADIC 645
P A+ ++ + K+ +A DS + K + + LD ++
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 646 -----VRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRR 698
VRA +A + M+E GI PN+ R Y + S + K + R+ R
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNR----RTYRTIISGLCKEKETEKVRKILR 548
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 145/378 (38%), Gaps = 70/378 (18%)
Query: 155 VVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDT 214
V+K M+ G+ P+ + + ++ +G EA ++ + +
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF-----------QVVGLMICSGISVSV 247
Query: 215 GAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
++ +++ SG+ + + LF++M Q G P+ ++Y ++K D VL +
Sbjct: 248 NVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSK 307
Query: 275 I----LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRR-------------DL 317
+ L ++ LC +H+ Y G + A + ++ EKR+ L
Sbjct: 308 VQSEGLAPDIVLCNLMIHT----YTRLGRFEEARKVFTSL-EKRKLVPDQYTFASILSSL 362
Query: 318 CRI----LRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
C L + IG D V LL N ++ + K + + Y
Sbjct: 363 CLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTY 422
Query: 374 TTLMKGYMKSGRVSDTVRMLEAM---RRQDDSASHP------------------------ 406
T + + G ++M + + ++ D+ H
Sbjct: 423 TVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCIL 482
Query: 407 -----DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
D VSYT + LV+A ++ A + +M G+ NR TY ++ G CK+ + +K
Sbjct: 483 EKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEK 542
Query: 462 ARELLRE-MAEDAEIQPD 478
R++LRE + E E+ P+
Sbjct: 543 VRKILRECIQEGVELDPN 560
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 152/356 (42%), Gaps = 39/356 (10%)
Query: 170 AWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANSGD 229
AW+A++ +G + EA+ LF + ++ P + L+A AN G
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQ-----------GVEPTRVTVSTCLSASANMGG 289
Query: 230 GKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHS 289
+ Q G+ D + ++ C+ + V +R+ E++V T +
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV----VTWNL 345
Query: 290 LVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSX 349
+++ YV G ++ A + Q MR ++ K D V L ++ ++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKL----------------KYDCVTLATLMSAAARTE 389
Query: 350 XXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHV 409
Q + + + + +T+M Y K G + D ++ DS D +
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-------DSTVEKDLI 442
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
+ T+++A ++G A ++ M GV N IT+N+++ + Q+D+A+++ +M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 470 AEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+ + I P+++S+ +++G + S A+ F +M+ G+ P S T + A A
Sbjct: 503 -QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 44/253 (17%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N + LM GY+++G+ + +R+ MR+Q P V+ +T +SA G ++ +
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ---GVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
Q A G+ + I LL YCK I+ A EM D + DVV++N++I G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA-----EMVFDRMFEKDVVTWNLIISG 349
Query: 489 CI---LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV--------F 537
+ LV+D A+ MR + ++ TLM A A + KL V F
Sbjct: 350 YVQQGLVED---AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 538 D----------------------EMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXX 575
+ + V D V+ DLI WN L+ Y G
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 576 XXXNGFHPDVGTY 588
G P+V T+
Sbjct: 467 MQLEGVPPNVITW 479
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 32/353 (9%)
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV 269
S D +N ++ G +LF+EM V+PD + ++ C R
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 270 FVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYI 329
+ E ++E +V + L +LV Y G +D A RE R +
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA-------REFFRKM------------ 273
Query: 330 GGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
SV + +M + + + +TT++ Y++S +
Sbjct: 274 -----SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+R+ E M S PD VS +V+SA G +D+A+ V + + G+ + N L
Sbjct: 329 LRVFEEMCC---SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
+ Y K +D R++ +M + +VVS++ +I+ + +++ ALS F M+
Sbjct: 386 INMYAKCGGLDATRDVFEKMP-----RRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+ P ++++ ++ + SG + ++F M ++ + L + +V+ + R
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y + +YT LMK Y K ++ +R+ R + + D + T++ +K G +D
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLY---LRMVERSFELDPCIFNTLIHGFMKLGMLD 324
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
+ R + ++M + GV +N TY+I++ YCK+ +D A L +I +V Y L
Sbjct: 325 KGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNL 384
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
I G A+ M GI P I+Y L+K + K A + ++++
Sbjct: 385 IFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN 442
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P+ Y ++ K +++AM ++ P Y++++ +L K G +
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAM---EELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A + A+M G+ + I Y I++ Y + +ID+A EL+ E+ + ++P +Y +L
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF-LRPSSFTYTVL 658
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G + + + ++M G++P + YT L+ F G K + +F M +
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM-GEND 717
Query: 546 VKVDLIAWNMLVEGYCR 562
+K D IA+ L+ G R
Sbjct: 718 IKHDHIAYITLLSGLWR 734
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/459 (19%), Positives = 176/459 (38%), Gaps = 80/459 (17%)
Query: 153 ASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRP 212
AS+V + ++P V + VV+ L D A + A+ RP
Sbjct: 532 ASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE-----------LGLRP 580
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
+++++ + G + F +M + G+ PD ++Y I++ R R D ++
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGK 332
E +++ + T L++ +V G + E +Y+
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMG----------------------MMEKGCQYL--- 675
Query: 333 NDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
K+L + + +PN +YT L+ ++K G + +
Sbjct: 676 -----DKMLEDGL---------------------SPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE------MTRIGVSANRITY 446
M D H DH++Y T++S L +A + RQV+ E + R+ + ++
Sbjct: 710 FGLMGEND--IKH-DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSI 766
Query: 447 NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMR 506
L Y + A E++ ++ + I P++ +N +I G A + M+
Sbjct: 767 PSSLGNYGSK---SFAMEVIGKVKK--SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQ 821
Query: 507 ARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXX 566
GI P ++YT LMK+ +G + A +F+ +P D + ++ L++G C
Sbjct: 822 KEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEP----DQVMYSTLLKGLCDFKRP 877
Query: 567 XXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
+G +P+ +Y + +R EA+
Sbjct: 878 LDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAV 916
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 7/215 (3%)
Query: 376 LMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVS-YTTVVSALVKAGFMDRARQVLAEM 434
L KG G +++ + ML+ + P V+ Y ++ K G A + M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGM---TRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA-EIQPDVVSYNILIDGCILVD 493
G +++ Y L+K YCK + A L M E + E+ P + +N LI G + +
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI--FNTLIHGFMKLG 321
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAW 553
F++M +G+ +Y ++ ++ G A R+F + ++ +
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCY 381
Query: 554 NMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
L+ G+ + G NG PD TY
Sbjct: 382 TNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D VSY++++S K G +++ ++ M + + +R YN ++ K + +AR L+
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAL 526
+ M E+ I+P+VV+YN LI + A F+EM +G+ PT +Y M+
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-- 418
Query: 527 SGQPKLAHRVFD------EMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ VF+ +M +P V+ + ML+ CR
Sbjct: 419 ----RTGEEVFELLAKMRKMGCEPTVE----TYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 581 FHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
PD+ +Y +G+ L K EA + E+K++
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ ++Y ++ K+ VS+ +++ M +++ P+ V+Y +++ L KA + A
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTM--EEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+QV EM G+ TY+ ++ ++ + +R+M +P V +Y +LI
Sbjct: 393 KQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMG----CEPTVETYIMLIR 448
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
D L ++EM+ + + P SY ++ L+G+ + A+ + EM
Sbjct: 449 KLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 12/192 (6%)
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A +V EM +GV + ++Y+ ++ Y K ++K +L M ++ I+PD YN ++
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKEC-IEPDRKVYNAVV 344
Query: 487 DGCILVDDSAGALSFFNEM-RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND-- 543
+ A + M +GI P ++Y +L+K + + + A +VFDEM+
Sbjct: 345 HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
Query: 544 -PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPG 602
P ++ +L G G P V TY + R
Sbjct: 405 FPTIRTYHAFMRILRTG-------EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 603 EALILWNEVKER 614
L+LW+E+KE+
Sbjct: 458 NVLLLWDEMKEK 469
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
+E R + V+YTT++ L +AG D A+++ EM GV + +TYNILL G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 453 YCKQLQIDKARELLREMAEDA----------EIQPDVVSYNILIDGCILVDDSAGALSFF 502
CK +++KA L+ ED ++P+VV+Y +I G A + F
Sbjct: 61 LCKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 503 NEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+M+ G P +Y TL++A G + + EM
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
++ EM++ G+ N +TY L++G + D A+E+ +EM D + PD+++YNIL+DG
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLDG 60
Query: 489 ---------CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
++ F + +G+ P ++YTT++ F G + A+ +F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 540 MVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYG 589
M D + D +N L+ + R G F D TYG
Sbjct: 121 MKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+ F EM RG+ ++YTTL++ +G +A +F EMV+D V D++ +N+L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLD 59
Query: 559 GYCRLGXXXXXXXXXX---------XXXXNGFHPDVGTYGSFANGIALARKPGEALILWN 609
G C+ G G P+V TY + +G EA L+
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 610 EVKE 613
++KE
Sbjct: 120 KMKE 123
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 23/192 (11%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
NT + +L+ G K D RM+EA + D+ PD SY ++S V+ ++A+
Sbjct: 91 NTITWNSLLIGISK-----DPSRMMEAHQLFDE-IPEPDTFSYNIMLSCYVRNVNFEKAQ 144
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
M + ++N ++ GY ++ +++KAREL M E E VS+N +I G
Sbjct: 145 SFFDRMP----FKDAASWNTMITGYARRGEMEKARELFYSMMEKNE-----VSWNAMISG 195
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
I D A FF RG+ +++T ++ + + + +LA +F +M V
Sbjct: 196 YIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMT----VNK 247
Query: 549 DLIAWNMLVEGY 560
+L+ WN ++ GY
Sbjct: 248 NLVTWNAMISGY 259
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 163/404 (40%), Gaps = 46/404 (11%)
Query: 159 MLRSGYLP------HVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRP 212
++RS YL + + +++R SGD AL +F + +
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK--------------- 90
Query: 213 DTGAFNAVLNACANSGDGKMFL-QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
+T +N++L + M QLFDE+P+ PD SYNI++ R +
Sbjct: 91 NTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+R+ ++ + ++++ Y G+++ A + +M EK + E
Sbjct: 147 FDRMPFKDA----ASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 202
Query: 332 KNDSVFQKLLPN------SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYT--TLMKGYMKS 383
+ S F K+ P + + V + K T N + T ++ GY+++
Sbjct: 203 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 262
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
R D +++ AM + P+ ++ + + + RQ+ +++ + +
Sbjct: 263 SRPEDGLKLFRAMLEE---GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
L+ YCK ++ A +L M + DVV++N +I G ++ AL F
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMK-----KKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
EM I P I++ ++ A +G + F+ MV D +V+
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 127/364 (34%), Gaps = 101/364 (27%)
Query: 287 LHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMN 346
L+ ++A V GD+D A + MR K NS IG D P+ M
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITW------NSLLIGISKD-------PSRMM 110
Query: 347 QSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHP 406
++ L + P+T Y ++ Y+++ + M +D +
Sbjct: 111 EAHQ----------LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA---- 156
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAR--- 463
S+ T+++ + G M++AR++ M + N +++N ++ GY + ++KA
Sbjct: 157 ---SWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 464 ------------------------ELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
EL M +D + ++V++N +I G + L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 500 SFFNEMRARGIAPTK-----------------------------------ISYTTLMKAF 524
F M GI P + T+L+ +
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
G+ A ++F+ M K D++AWN ++ GY + G N PD
Sbjct: 330 CKCGELGDAWKLFEVMK-----KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 585 VGTY 588
T+
Sbjct: 385 WITF 388
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 148/385 (38%), Gaps = 27/385 (7%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD FN +++A K L+ ++ + VP +Y +++K C +
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDF-----GDLDTAEIIVQAMREKRRDLCRILRESN 325
VL + +V T ++ AY++ G+ + A + Q M +RD C+ E+
Sbjct: 234 VLVEMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM---KRDRCKPTTETY 289
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+ L+ N ++ + PN YT L+ + + G
Sbjct: 290 N-------------LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ E + Q+D PD Y ++ + +AG+ A ++ + M +G +R +
Sbjct: 337 CEKAEEIFEQL--QEDGL-EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 393
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YNI++ Y + A + EM I P + S+ +L+ D + EM
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G+ P +++ + GQ ++ EM N P D+ +N+L+ Y + G
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGF 511
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGS 590
F PDV T+ S
Sbjct: 512 LERIEELFVELKEKNFRPDVVTWTS 536
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 122/313 (38%), Gaps = 25/313 (7%)
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
P T +Y ++G MK R +T ++ +R P +Y +++ KA
Sbjct: 245 PKTIGVTVYNAYIEGLMK--RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+ ++ EM N TY L+ + ++ +KA E+ ++ ED ++PDV YN
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG-LEPDVYVYNA 361
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN-- 542
L++ GA F+ M+ G P + SY ++ A+ +G A VF+EM
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 543 -DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
P +K + +L+ Y + NG PD S N L +
Sbjct: 422 IAPTMKSHM----LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRL 474
Query: 602 GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
G+ + + E EN P D + L +I +A F + E+ +
Sbjct: 475 GQFTKMEKILAE-------MENG-----PCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 662 EENGIPPNKTKFT 674
+E P+ +T
Sbjct: 523 KEKNFRPDVVTWT 535
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 19/227 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ +Y LM+ Y ++G + M+ PD SY +V A +AG A
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHM---GCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
V EM R+G++ ++ +LL Y K + K +++EM+E+ ++PD N ++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDTFVLNSML- 468
Query: 488 GCILVDDSAGALSFFNEMRA------RGIAPTKIS-YTTLMKAFALSGQPKLAHRVFDEM 540
+ G L F +M G IS Y L+ + +G + +F E+
Sbjct: 469 ------NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
+ + D++ W + Y R +G PD GT
Sbjct: 523 -KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 148/371 (39%), Gaps = 29/371 (7%)
Query: 301 DTAEIIVQAMREKRRD----LCR-ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXX 355
D + VQ K+ D +C ILR+S+ + D + LL ++ Q
Sbjct: 143 DLINVSVQLRLNKKWDSIILVCEWILRKSSFQ-----PDVICFNLLIDAYGQKFQYKEAE 197
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
LL Y P Y L+K Y +G + +L M+ S Y +
Sbjct: 198 SLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI 257
Query: 416 SALVK-AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
L+K G + A V M R TYN+++ Y K + + +L EM +
Sbjct: 258 EGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQ 316
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
+P++ +Y L++ A F +++ G+ P Y LM++++ +G P A
Sbjct: 317 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 376
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+F ++ + D ++N++V+ Y R G G P + ++ +
Sbjct: 377 EIFS-LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
+ AR + + VKE E G ++PD +L+++ ++ R F K
Sbjct: 436 YSKARDVTKCEAI---VKEMSENG------------VEPDTFVLNSMLNLYGRLGQFTKM 480
Query: 655 LEIVACMEENG 665
+I+A M ENG
Sbjct: 481 EKILAEM-ENG 490
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 26/321 (8%)
Query: 356 VYQPPLLPKPYTP-NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTV 414
+YQ +P T N I +++ +K+G++ +++ + M+R PD V+Y T+
Sbjct: 153 IYQS--IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD---GLKPDVVTYNTL 207
Query: 415 VSALVKA--GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAED 472
++ +K G+ +A +++ E+ G+ + + Y +L + ++A +++M +
Sbjct: 208 LAGCIKVKNGY-PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 473 AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKL 532
P++ Y+ L++ D A EM++ G+ P K+ TTL+K + G
Sbjct: 267 GH-SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 533 AHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFA 592
+ + E+ + + ++ + ML++G + G G D +A
Sbjct: 326 SRELLSELESAGYAENEM-PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD-----GYA 379
Query: 593 NGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFR 652
N I ++ AL KE E RD E + K D +L+T+ RA
Sbjct: 380 NSIMIS-----ALCRSKRFKEAKELSRDSETTYE-----KCDLVMLNTMLCAYCRAGEME 429
Query: 653 KALEIVACMEENGIPPNKTKF 673
+ ++ M+E + P+ F
Sbjct: 430 SVMRMMKKMDEQAVSPDYNTF 450
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 151/398 (37%), Gaps = 74/398 (18%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
N +L SG + +QLF+ M Q G + + +Y+ +K K+ L + + I
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHGKISVS-TYSSCIKFVGAKNVSKALE-IYQSIP 158
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRD------------LCRILRES 324
+++ + + +S+++ V G LD+ ++ + +RD L ++
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSC---IKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 325 NS-----EYIGG------KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
N E IG + DSV + + + + + ++PN Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
++L+ Y G D + E M P+ V TT++ +K G DR+R++L+E
Sbjct: 276 SSLLNSYSWKG---DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 434 MTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVD 493
+ G + N + Y +L+ G K ++++AR
Sbjct: 333 LESAGYAENEMPYCMLMDGLSKAGKLEEAR------------------------------ 362
Query: 494 DSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV---KVDL 550
S F++M+ +G+ + + ++ A S + K A E+ D K DL
Sbjct: 363 ------SIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA----KELSRDSETTYEKCDL 412
Query: 551 IAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
+ N ++ YCR G PD T+
Sbjct: 413 VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 407 DHVSYTTVVSAL--VKAGFMDRARQVLAEMTR---IGVSANRITYNILLKG--------Y 453
++ SY + L K+G + RA + M + TY+IL K +
Sbjct: 139 ENCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSF 198
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
L ++ R L R+M D+ I+PDV + N L+ G + +EM+ +G P
Sbjct: 199 INHLYMETVRSLFRQMV-DSGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPN 252
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
SY +L+ AFALSG+ A + EM+ + RV VD I++ LV+ CR G
Sbjct: 253 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VDFISYRTLVDESCRKG 302
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y L++ + +SG+V D V L + D S PD ++ V+ A K G +
Sbjct: 206 PNVVTYNILLRAFAQSGKV-DQVNAL--FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI- 486
VL M + IT+N+L+ Y K+ + +K + + + E +P + ++N +I
Sbjct: 263 EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMII 321
Query: 487 --DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
++D + N+M P+ I+Y ++ + G A +F+E+
Sbjct: 322 NYGKARMIDKAEWVFKKMNDM---NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESD 378
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
RV + N ++E YCR G HPD TY
Sbjct: 379 RV-LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 384 GRVSDTVRMLEAMR-RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
G+ ++ LE R Q PD+ Y+ ++S + K G A + +EM G +
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 443 RITYNILLKGYC----KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
YN L+ + K ++K R L +M QP+VV+YNIL+
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+ F ++ ++P ++ +M A+ +G K V M ++ K D+I +N+L++
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLID 286
Query: 559 GY 560
Y
Sbjct: 287 SY 288
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 36/367 (9%)
Query: 164 YLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNA 223
Y+P +S ++S + G + A+ LF + + RPD +NA++ A
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-----------SGCRPDASVYNALITA 177
Query: 224 CANSGDGKMFLQ----LFDEMPQFG-VVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++ D L+ D+M P+ ++YNI+++ + + D + + + +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
V + T + ++ AY G + E ++ MR C K D +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE---C-------------KPDIITF 281
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
+L +S + L+ P + +++ Y K+ R+ D + ++
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA-RMIDKAEWV--FKK 338
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+D P ++Y ++ G + RAR++ E+ T N +L+ YC+
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+A +L A + PD +Y L D +M GI P K +
Sbjct: 399 YIEADKLFHN-ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 457
Query: 519 TLMKAFA 525
++ F
Sbjct: 458 EALEVFG 464
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 148/385 (38%), Gaps = 27/385 (7%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD FN +++A K L+ ++ + VP +Y +++K C +
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDF-----GDLDTAEIIVQAMREKRRDLCRILRESN 325
VL + +V T ++ AY++ G+ + A + Q M +RD C+ E+
Sbjct: 212 VLVEMQNHHVSP-KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM---KRDRCKPTTETY 267
Query: 326 SEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+ L+ N ++ + PN YT L+ + + G
Sbjct: 268 N-------------LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ E + Q+D PD Y ++ + +AG+ A ++ + M +G +R +
Sbjct: 315 CEKAEEIFEQL--QEDGL-EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
YNI++ Y + A + EM I P + S+ +L+ D + EM
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGX 565
G+ P +++ + GQ ++ EM N P D+ +N+L+ Y + G
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGF 489
Query: 566 XXXXXXXXXXXXXNGFHPDVGTYGS 590
F PDV T+ S
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTS 514
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 122/313 (38%), Gaps = 25/313 (7%)
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
P T +Y ++G MK R +T ++ +R P +Y +++ KA
Sbjct: 223 PKTIGVTVYNAYIEGLMK--RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+ ++ EM N TY L+ + ++ +KA E+ ++ ED ++PDV YN
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG-LEPDVYVYNA 339
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN-- 542
L++ GA F+ M+ G P + SY ++ A+ +G A VF+EM
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 543 -DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
P +K + +L+ Y + NG PD S N L +
Sbjct: 400 IAPTMKSHM----LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRL 452
Query: 602 GEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
G+ + + E EN P D + L +I +A F + E+ +
Sbjct: 453 GQFTKMEKILAE-------MENG-----PCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 662 EENGIPPNKTKFT 674
+E P+ +T
Sbjct: 501 KEKNFRPDVVTWT 513
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 19/227 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ +Y LM+ Y ++G + M+ PD SY +V A +AG A
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHM---GCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
V EM R+G++ ++ +LL Y K + K +++EM+E+ ++PD N ++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDTFVLNSML- 446
Query: 488 GCILVDDSAGALSFFNEMRA------RGIAPTKIS-YTTLMKAFALSGQPKLAHRVFDEM 540
+ G L F +M G IS Y L+ + +G + +F E+
Sbjct: 447 ------NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
+ + D++ W + Y R +G PD GT
Sbjct: 501 -KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 148/371 (39%), Gaps = 29/371 (7%)
Query: 301 DTAEIIVQAMREKRRD----LCR-ILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXX 355
D + VQ K+ D +C ILR+S+ + D + LL ++ Q
Sbjct: 121 DLINVSVQLRLNKKWDSIILVCEWILRKSSFQ-----PDVICFNLLIDAYGQKFQYKEAE 175
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
LL Y P Y L+K Y +G + +L M+ S Y +
Sbjct: 176 SLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI 235
Query: 416 SALVK-AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
L+K G + A V M R TYN+++ Y K + + +L EM +
Sbjct: 236 EGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQ 294
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
+P++ +Y L++ A F +++ G+ P Y LM++++ +G P A
Sbjct: 295 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 354
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+F ++ + D ++N++V+ Y R G G P + ++ +
Sbjct: 355 EIFS-LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
+ AR + + VKE E G ++PD +L+++ ++ R F K
Sbjct: 414 YSKARDVTKCEAI---VKEMSENG------------VEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 655 LEIVACMEENG 665
+I+A M ENG
Sbjct: 459 EKILAEM-ENG 468
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 407 DHVSYTTVVSAL--VKAGFMDRARQVLAEMTR---IGVSANRITYNILLKG--------Y 453
++ SY + L K+G + RA + M + TY+IL K +
Sbjct: 164 ENCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSF 223
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
L ++ R L R+M D+ I+PDV + N L+ G + +EM+ +G P
Sbjct: 224 INHLYMETVRSLFRQMV-DSGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPN 277
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
SY +L+ AFALSG+ A + EM+ + RV VD I++ LV+ CR G
Sbjct: 278 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VDFISYRTLVDESCRKG 327
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 11/224 (4%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y L++ + +SG+V D V L + D S PD ++ V+ A K G +
Sbjct: 206 PNVVTYNILLRAFAQSGKV-DQVNAL--FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI- 486
VL M + IT+N+L+ Y K+ + +K + + + E +P + ++N +I
Sbjct: 263 EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMII 321
Query: 487 --DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
++D + N+M P+ I+Y ++ + G A +F+E+
Sbjct: 322 NYGKARMIDKAEWVFKKMNDM---NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESD 378
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
RV + N ++E YCR G HPD TY
Sbjct: 379 RV-LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 384 GRVSDTVRMLEAMR-RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSAN 442
G+ ++ LE R Q PD+ Y+ ++S + K G A + +EM G +
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 443 RITYNILLKGYC----KQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
YN L+ + K ++K R L +M QP+VV+YNIL+
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVE 558
+ F ++ ++P ++ +M A+ +G K V M ++ K D+I +N+L++
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLID 286
Query: 559 GY 560
Y
Sbjct: 287 SY 288
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 36/367 (9%)
Query: 164 YLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNA 223
Y+P +S ++S + G + A+ LF + + RPD +NA++ A
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-----------SGCRPDASVYNALITA 177
Query: 224 CANSGDGKMFLQ----LFDEMPQFG-VVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++ D L+ D+M P+ ++YNI+++ + + D + + + +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
V + T + ++ AY G + E ++ MR C K D +
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE---C-------------KPDIITF 281
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
+L +S + L+ P + +++ Y K+ R+ D + ++
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA-RMIDKAEWV--FKK 338
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
+D P ++Y ++ G + RAR++ E+ T N +L+ YC+
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYT 518
+A +L A + PD +Y L D +M GI P K +
Sbjct: 399 YIEADKLFHN-ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 457
Query: 519 TLMKAFA 525
++ F
Sbjct: 458 EALEVFG 464
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 14/259 (5%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ R + L+ G+ K+ + D M++ M+ + + PD V+YT+ V A K G R
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT---PDVVTYTSFVEAYCKEGDFRRV 327
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
++L EM G + N +TY I++ K Q+ +A + +M ED + PD Y+ LI
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV-PDAKFYSSLIH 386
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND---- 543
A F +M +G+ + Y T++ A + ++A R+ M ++
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Query: 544 --PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKP 601
P V+ + L++ C N DV TY G+ ++ K
Sbjct: 447 CSPNVE----TYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKV 502
Query: 602 GEALILWNEVKERWEAGRD 620
EA + + E + RD
Sbjct: 503 EEACLFFEEAVRKGMVPRD 521
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 54/258 (20%)
Query: 410 SYTTVVSALVKAGFMDRARQVLAEMTR-IGVSANRITYNILLKGYCKQLQIDKARELLRE 468
+ + V+ L K+G ++A EM + GV + I N L+ K+ I+ A E+ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 469 MAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
+ + I+PD ++NILI G A + + M+ P ++YT+ ++A+ G
Sbjct: 265 LFD--TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 529 QPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
+ + + +EM NG +P+V TY
Sbjct: 323 DFRRVNEMLEEM------------------------------------RENGCNPNVVTY 346
Query: 589 GSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRA 648
+ + +++ EAL ++ ++KE D V PD +L I +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKE-----------DGCV----PDAKFYSSLIHILSKT 391
Query: 649 AFFRKALEIVACMEENGI 666
F+ A EI M G+
Sbjct: 392 GRFKDAAEIFEDMTNQGV 409
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+TP+ YT+ ++ Y K G MLE MR ++ +P+ V+YT V+ +L K+ +
Sbjct: 304 FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR---ENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A V +M G + Y+ L+ K + A E+ +M ++ DV+ YN +
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG-VRRDVLVYNTM 419
Query: 486 IDGCILVDDSAGALSFFNEM---RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
I + AL M +P +Y L+K + KL + MV
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 543 DPRVKVDLIAWNMLVEGYCRLG 564
+ V +D+ + +L+ G C G
Sbjct: 480 ND-VSIDVSTYILLIRGLCMSG 500
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR-IGVSANRITYNIL 449
++L ++ + PD ++Y +V+ L +AG ++ VL+ M VS N ITYN +
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
L G K + D + EM + I+PD++SY +ID + +L F+EM+ R
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQ-CGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ 313
Query: 510 IAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
I P+ Y L+ SG + A ++ DE+ N
Sbjct: 314 IRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 21/254 (8%)
Query: 289 SLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQS 348
+LV + G+L A ++Q+++EK ++C + SVF+ LL + +
Sbjct: 75 NLVEKFTRDGNLSGAYDLLQSLQEK--NICLPI-------------SVFKNLLAAAGELN 119
Query: 349 XXXXXXXVYQPPL-LPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPD 407
V++ L LP ++ Y L + ++ + D L ++ ++ +S P
Sbjct: 120 DMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINT----DDCTYLTSLLKEISESSLPY 175
Query: 408 H-VSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
+ ++ A + +D+ +L EM + ITYN +L + +++ +L
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAL 526
M ED + ++++YN +++G L +NEM GI P +SYT ++ +
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 527 SGQPKLAHRVFDEM 540
SG K + R+FDEM
Sbjct: 296 SGNVKESLRLFDEM 309
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 150/359 (41%), Gaps = 31/359 (8%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P + ++ ++S ASS D A G+ LR + + + AD + + ++++CA
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGV-------LRLVQESGMTADCK----LYTTLISSCA 513
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMT 285
SG ++F +M GV + ++ ++ C R + + +NV
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573
Query: 286 TLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSM 345
++L++A G +D A ++ M+ + + + + IG L+
Sbjct: 574 VFNALISACGQSGAVDRAFDVLAEMKAETHPI-----DPDHISIGA--------LMKACC 620
Query: 346 NQSXXXXXXXVYQPPLLPKPYTPNT-RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSAS 404
N VYQ ++ K T +YT + KSG + + M+ +D +
Sbjct: 621 NAGQVERAKEVYQ--MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVT-- 676
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD V ++ ++ A +D A +L + G+ I+Y+ L+ C KA E
Sbjct: 677 -PDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE 735
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKA 523
L E + +++P + + N LI + A+ + +E++ G+ P I+Y+ LM A
Sbjct: 736 LY-EKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
+R +S D YTT++S+ K+G +D +V +M+ GV AN T+ L+ G +
Sbjct: 490 LRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR 549
Query: 456 QLQIDK---ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG--I 510
Q+ K A +LR ++PD V +N LI C A EM+A I
Sbjct: 550 AGQVAKAFGAYGILRS----KNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPI 605
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVF 537
P IS LMKA +GQ + A V+
Sbjct: 606 DPDHISIGALMKACCNAGQVERAKEVY 632
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 122/319 (38%), Gaps = 52/319 (16%)
Query: 381 MKSGRVSDTVRMLEAMRRQD----DSASH-------------------------PDHVSY 411
++ GR+ D + +LE + ++D D H P ++
Sbjct: 411 LRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTF 470
Query: 412 TTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE 471
++S + ++ AR VL + G++A+ Y L+ K ++D E+ +M+
Sbjct: 471 NMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS- 529
Query: 472 DAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPK 531
++ ++ ++ ++ LIDGC A A + +R++ + P ++ + L+ A SG
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589
Query: 532 LAHRVFDEMVNDPR-VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
A V EM + + D I+ L++ C G G GT
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR---GTPEV 646
Query: 591 FANGIALARKPGE---ALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVR 647
+ + K G+ A ++ ++KE+ + PDE L D+
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEK---------------DVTPDEVFFSALIDVAGH 691
Query: 648 AAFFRKALEIVACMEENGI 666
A +A I+ + GI
Sbjct: 692 AKMLDEAFGILQDAKSQGI 710
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 139/350 (39%), Gaps = 27/350 (7%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P FN +++ CA+S D + + + + G+ D Y ++ C + + D + V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG- 330
++ V + T +L+ G + A +R K R++ + G
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 331 -GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDT 389
G D F L P P+ LMK +G+V
Sbjct: 585 SGAVDRAFDVLAEMKAET----------------HPIDPDHISIGALMKACCNAGQVERA 628
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
+ + + + + P+ YT V++ K+G D A + +M V+ + + ++ L
Sbjct: 629 KEVYQMIHKYGIRGT-PE--VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSAL 685
Query: 450 LK--GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
+ G+ K L D+A +L++ A+ I+ +SY+ L+ C D AL + ++++
Sbjct: 686 IDVAGHAKML--DEAFGILQD-AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 508 RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLV 557
+ PT + L+ A Q A DE + +K + I ++ML+
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDE-IKTLGLKPNTITYSMLM 791
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y T++ Y G+ D M A++ +Y T++ A K M++ R +L
Sbjct: 736 YNTIIAAY---GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M + + TYNI++ Y +Q ID+ ++L+E+ E + PD+ SYN LI +
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG-LGPDLCSYNTLIKAYGIG 851
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
A+ EMR R I P K++YT L+ A
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 125/633 (19%), Positives = 230/633 (36%), Gaps = 102/633 (16%)
Query: 68 LLTLLQQR-KTEEAWIAYTQCTHLPNPTCLSRLVSQLSYHNTLPSLTRAQSILTRLRNER 126
L+ L Q+ EEA A++ C S S ++ + L +A+ ++ ++ +R
Sbjct: 251 LMGLYQKNWNVEEAEFAFSHMRKF-GIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDR 309
Query: 127 QLHRLDANSXXXXXXXXXXXXHTLYAASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVE 186
RL + A S++ SM +G+ P++ A++ +++
Sbjct: 310 V--RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEA 367
Query: 187 ALGLFRAVTR--------RLRKITDPDVAADS----------------RPDTGAFNAVLN 222
A GLF + R + + AD+ +P++ ++N
Sbjct: 368 AQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLIN 427
Query: 223 ACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPL 282
A GD ++ ++M G ++ I+++ + + D++ VL+ ++ L
Sbjct: 428 LQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRL 486
Query: 283 CMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR-RD------LCRILRESNSEYIGGKNDS 335
T+ SLV AYV G +D + +REK+ RD L +L S E G D+
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDC---LGLLREKKWRDSAFESHLYHLLICSCKES-GQLTDA 542
Query: 336 VFQKLLPNSM------NQSXXXXXXXVYQPPLLPKPYTPNTRIYTTL------------- 376
V K+ + M N +Y + ++ ++Y L
Sbjct: 543 V--KIYNHKMESDEEINLHITSTMIDIYT---VMGEFSEAEKLYLNLKSSGVVLDRIGFS 597
Query: 377 --MKGYMKSGRVSDTVRMLEAMRRQDD--------------------------------- 401
++ Y+K+G + + +LE M Q D
Sbjct: 598 IVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRK 657
Query: 402 SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDK 461
S H + Y V++ +A +D EM R G + N +T+N+LL Y K K
Sbjct: 658 SGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK 717
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLM 521
EL + DV+SYN +I D S M+ G + + +Y TL+
Sbjct: 718 VNELFLLAKRHGVV--DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLL 775
Query: 522 KAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF 581
A+ Q + + M D +N+++ Y G +G
Sbjct: 776 DAYGKDKQMEKFRSILKRM-KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 582 HPDVGTYGSFANGIALARKPGEALILWNEVKER 614
PD+ +Y + + EA+ L E++ R
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
++ + Y TL+ Y K ++ +L+ M++ S S PDH +Y +++ + G++D
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKK---STSGPDHYTYNIMINIYGEQGWID 820
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
VL E+ G+ + +YN L+K Y +++A L++EM I PD V+Y L
Sbjct: 821 EVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM-RGRNIIPDKVTYTNL 879
Query: 486 IDGCILVDDSAGALSFFNEMRARGI 510
+ D+ A+ + M+ GI
Sbjct: 880 VTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 37/339 (10%)
Query: 219 AVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ 278
++++ A +G K Q+F+E P L +N+++ CR + + + E+
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 279 NVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQ 338
N + +L+ YVD G+L+ A+ + + M EK + V
Sbjct: 226 NSG----SWSTLIKGYVDSGELNRAKQLFELMPEK--------------------NVVSW 261
Query: 339 KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRR 398
L N +Q+ +L K PN ++ KSG + +R+ +
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL- 320
Query: 399 QDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQ 458
D+ D T +V K G +D A V + M + +++ +++G+ +
Sbjct: 321 --DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI----LSWTAMIQGWAVHGR 374
Query: 459 IDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA-RGIAPTKISY 517
+A + R+M E +PD V + ++ C+ + L+FF+ MR I PT Y
Sbjct: 375 FHQAIQCFRQMMYSGE-KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHY 433
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
++ +G+ AH + + M +P DL W L
Sbjct: 434 VLVVDLLGRAGKLNEAHELVENMPINP----DLTTWAAL 468
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 34/259 (13%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N + L++G ++ R +VR M R PD +++ V+ + K GF R
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRL---GVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+ A + V + L+ Y K Q+ A ++ E + D + ++ +N+LI+G
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE-SPDRIKKESILIWNVLING 205
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
D A + F M R S++TL+K + SG+ A ++F+ M P V
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSG----SWSTLIKGYVDSGELNRAKQLFELM---PEKNV 258
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD-------------VGTYGS----- 590
++W L+ G+ + G G P+ G GS
Sbjct: 259 --VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 591 ---FANGIALARKPGEALI 606
NGI L R G AL+
Sbjct: 317 GYILDNGIKLDRAIGTALV 335
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 375 TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM 434
+L+ Y K+G++ ++ E D + + +++ +A M A + M
Sbjct: 166 SLVDMYAKTGQLKHAFQVFE---ESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM 222
Query: 435 TRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDD 494
N +++ L+KGY ++++A++L M E +VVS+ LI+G D
Sbjct: 223 PE----RNSGSWSTLIKGYVDSGELNRAKQLFELMPE-----KNVVSWTTLINGFSQTGD 273
Query: 495 SAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWN 554
A+S + EM +G+ P + + ++ A + SG R+ ++ D +K+D
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL-DNGIKLDRAIGT 332
Query: 555 MLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
LV+ Y + G N H D+ ++ + G A+ + +A+
Sbjct: 333 ALVDMYAKCG----ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 166/438 (37%), Gaps = 92/438 (21%)
Query: 168 VKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
V W++++S A++G +EALG+F ++ RL + R +F +V+ CAN
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSM--RLNYV---------RLSESSFASVIKLCANL 308
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
+ + QL + ++G + D NI L + ++ L E C+ +
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQ---NIRTALMVAYSKCTAMLDALRLFKEIG---CVGNV 362
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQ 347
S A F D E V E +R R PN
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR----------------------PNEFTY 400
Query: 348 SXXXXXXXVYQPP-----LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDS 402
S V P ++ Y ++ + T L+ Y+K G+V + ++ + DD
Sbjct: 401 SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI---DD- 456
Query: 403 ASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY---------------- 446
D V+++ +++ + G + A ++ E+T+ G+ N T+
Sbjct: 457 ---KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 447 --------------------NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
+ LL Y K+ I+ A E+ + E D+VS+N +I
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE-----KDLVSWNSMI 568
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
G + AL F EM+ R + +++ + A +G + + FD MV D ++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 547 KVDLIAWNMLVEGYCRLG 564
+ +V+ Y R G
Sbjct: 629 APTKEHNSCMVDLYSRAG 646
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 149/376 (39%), Gaps = 43/376 (11%)
Query: 168 VKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
V +W+A++S A +G+ EAL LF+ + + + RPD V++ACA S
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMK-----------TNVRPDESTMVTVVSACAQS 279
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
G ++ Q+ + G + N ++ L + + + ER+ ++V +
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV----ISW 335
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQ 347
++L+ Y A ++ Q M LR + ND +LP +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEM----------LRSGET-----PNDVTMLSILPACAHL 380
Query: 348 SXXXXX--XXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASH 405
VY L K T + + T+L+ Y K G + EA + +S H
Sbjct: 381 GAIDIGRWIHVYIDKRL-KGVTNASSLRTSLIDMYAKCGDI-------EAAHQVFNSILH 432
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
S+ ++ G D + + + M +IG+ + IT+ LL +D R +
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
R M +D ++ P + Y +ID L+ S + + P + + +L+KA
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMID---LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 526 LSGQPKLAHRVFDEMV 541
+ G +L + ++
Sbjct: 550 MHGNVELGESFAENLI 565
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++T+L+ Y+++GR+ D ++ D + H D VSYT ++ G+++ A+++
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVF-------DKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
E+ V +++N ++ GY + +A EL ++M + ++PD + ++ C
Sbjct: 224 DEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACA- 277
Query: 492 VDDSAGALSFFNEMRA----RGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
+G++ ++ G L+ ++ G+ + A +F+ +
Sbjct: 278 ---QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK---- 330
Query: 548 VDLIAWNMLVEGYCRL 563
D+I+WN L+ GY +
Sbjct: 331 -DVISWNTLIGGYTHM 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
+T+++S V+ G ++ A +V + V ++Y L+KGY + I+ A++L E+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDV----VSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
DVVS+N +I G + AL F +M + P + + T++ A A SG
Sbjct: 228 -----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 531 KLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
+L +V ++D +L N L++ Y + G + DV ++ +
Sbjct: 283 ELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YKDVISWNT 337
Query: 591 FANGIALARKPGEALILWNEVKERWEAGRD 620
G EAL+L+ E+ E D
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPND 367
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 35/327 (10%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y + PN+ +Y T+++ +S + +R M ++++ P ++++ ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 417 ALVKAGFMDRARQVLAEMTRIGV--SANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
A +KA F +Q+ + + GV S + +L + Y + + AR++ E+
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL-RIYVEDKLLFDARKVFDEIP---- 179
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG---QPK 531
QPDVV +++L++G + + L F EM RGI P + S TT + A A G Q K
Sbjct: 180 -QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238
Query: 532 LAHRVFDEMVNDPR-VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
H E V R ++ D+ LV+ Y + G G
Sbjct: 239 WIH----EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGG 294
Query: 591 FANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAF 650
+A A+K L +R E RE+ +KPD +L + C F
Sbjct: 295 YA-AYGYAKKATTCL-------DRIE----REDG------IKPDSVVLLGVLAACAHGGF 336
Query: 651 FRKALEIVACMEEN-GIPPNKTKFTRI 676
+ ++ ME GI P ++ I
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCI 363
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y ++ G K+G+ + + + S PD +Y + +++ + RA ++ A
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLL---ISGLQPDVQTY----NMMIRFSSLGRAEKLYA 69
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM R G+ + ITYN ++ G CKQ ++ +AR+ + ++N LI+G
Sbjct: 70 EMIRRGLVPDTITYNSMIHGLCKQNKLAQARK----------VSKSCSTFNTLINGYCKA 119
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
++ F EM RGI I+YTTL+ F G A +F EMV++
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
PD ++Y +++ L K + +AR+V S + T+N L+ GYCK ++ L
Sbjct: 78 PDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
EM I +V++Y LI G V D AL F EM + G+ + I++
Sbjct: 129 FCEMYRRG-IVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 24/307 (7%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
+Y+ L+P T Y+ ++ Y KSG+V + + + E R + PD ++++ +
Sbjct: 247 MYKTGLMPDEVT-----YSAILDVYSKSGKVEEVLSLYE---RAVATGWKPDAIAFSVLG 298
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
+AG D R VL EM + V N + YN LL+ + + AR L EM E A +
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE-AGL 357
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
P+ + L+ + AL + EM+A+ I Y TL+ A G + A R
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 536 VFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGI 595
+F++M + + D ++ ++ Y G G +V +
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 596 ALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKAL 655
A++ + + +++ +R +KPD+ L L + A
Sbjct: 478 GKAKRIDDVVYVFDLSIKR---------------GVKPDDRLCGCLLSVMALCESSEDAE 522
Query: 656 EIVACME 662
+++AC+E
Sbjct: 523 KVMACLE 529
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 381 MKSGRVSDTVRMLEAMRRQ-DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGV 439
MKS R +++E M + D+++Y+T+++ + ++A + M + G+
Sbjct: 193 MKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGL 252
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
+ +TY+ +L Y K ++++ L E A +PD +++++L D G
Sbjct: 253 MPDEVTYSAILDVYSKSGKVEEVLSLY-ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIR 311
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
EM++ + P + Y TL++A +G+P LA +F+EM+
Sbjct: 312 YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILL 450
+ +E R + PD V+Y+ ++ K+G ++ + G + I +++L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 451 KGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGI 510
K + + D R +L+EM + +++P+VV YN L++ A S FNEM G+
Sbjct: 299 KMFGEAGDYDGIRYVLQEM-KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
P + + T L+K + + + A ++++EM + +D I +N L+ +G
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEM-KAKKWPMDFILYNTLLNMCADIG 410
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 444 ITYNILLKG--YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSF 501
I YN+ +K + +Q Q+ E+ EM +D ++ D ++Y+ +I + A+ +
Sbjct: 187 IFYNVTMKSLRFGRQFQL--IEEMALEMVKDG-VELDNITYSTIITCAKRCNLYNKAIEW 243
Query: 502 FNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYC 561
F M G+ P +++Y+ ++ ++ SG+ + +++ V K D IA+++L + +
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW-KPDAIAFSVLGKMFG 302
Query: 562 RLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDR 621
G P+V Y + + A KPG A L+NE+ EAG
Sbjct: 303 EAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM---LEAG--- 356
Query: 622 ENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIP 667
L P+E L L I +A + R AL++ M+ P
Sbjct: 357 ---------LTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 143/342 (41%), Gaps = 22/342 (6%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P F ++ ++ + + +++ ++M G V D + Y+ +M C + D ++ +
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ + E+ + +VD G + + M+E ++ E+ E
Sbjct: 259 YQELKEK------------LGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKV 306
Query: 332 KNDS-----VFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
+ + V + L N V + P+ N + ++ GY G+
Sbjct: 307 RMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITY 446
+ +E R+ D PD +S+ +++ L + A ++ EM V + TY
Sbjct: 367 EEA---MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 447 NILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMR 506
+L+ K+ +ID+ + M E + ++P++ YN L D I A SFF+ M
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVE-SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Query: 507 ARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
++ + +Y +M+A + +G+ ++ DEM++D V+V
Sbjct: 483 SK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRV 523
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 117/284 (41%), Gaps = 22/284 (7%)
Query: 400 DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI 459
D++ +P ++ +V LV +++A ++ +M G + + Y+ L+ G K
Sbjct: 193 DNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDA 252
Query: 460 DKARELLREMAED-AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG--IAPTKIS 516
D +L +E+ E D V Y L+ G + + A+ + E + + ++
Sbjct: 253 DGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMA 312
Query: 517 YTTLMKAFALSGQPKLAHRVFDEMV---NDPR-VKVDLIAWNMLVEGYCRLGXXXXXXXX 572
Y +++A + +G+ A ++FD + N PR + V+L +N++V GYC G
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 573 XXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLK 632
PD ++ + N + EA L+ E++E+ +K
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK---------------NVK 417
Query: 633 PDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFTRI 676
PDE L D C + + M E+ + PN + R+
Sbjct: 418 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 1/220 (0%)
Query: 394 EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGY 453
E + Q+ + +++ + G + A++V EM +++N LL
Sbjct: 92 EILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNAC 151
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPT 513
+ D + +E+ I+PDV SYN LI G A++ +E+ +G+ P
Sbjct: 152 VNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD 211
Query: 514 KISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
I++ L+ G+ + +++ MV + VK D+ ++N + G
Sbjct: 212 HITFNILLHESYTKGKFEEGEQIWARMV-EKNVKRDIRSYNARLLGLAMENKSEEMVSLF 270
Query: 574 XXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
N PDV T+ + G K EA+ + E+++
Sbjct: 271 DKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMP-QFGVVPDALSYNIVMKLCCRKDRKDLLVFVLER 274
+FNA+LNAC NS + +F E+P + + PD SYN ++K C K V +++
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 275 ILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG---- 330
I + + T + L+ G + E I M EK ++ R +R N+ +G
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK--NVKRDIRSYNARLLGLAME 260
Query: 331 GKND---SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
K++ S+F KL N + P+ +T ++KG++ G++
Sbjct: 261 NKSEEMVSLFDKLKGNELK---------------------PDVFTFTAMIKGFVSEGKLD 299
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ + + + + + P + +++ A+ KAG ++ A ++ E+ + +
Sbjct: 300 EAITWYKEIEK---NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQ 356
Query: 448 ILLKGYCKQLQIDKARELL 466
++ K + D+A E++
Sbjct: 357 EVVDALVKGSKQDEAEEIV 375
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD SY T++ L G A ++ E+ G+ + IT+NILL + + ++ +
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
+ M E ++ D+ SYN + G + + S +S F++++ + P ++T ++K F
Sbjct: 234 IWARMVEK-NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
G+ A + E+ + + + +N L+ C+ G
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFV-FNSLLPAICKAG 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 235 QLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQ-NVPLCMTTLHSLVAA 293
++FDEMP+ ALS+N ++ C + DL+ + + + + ++ + + ++L+
Sbjct: 127 KVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186
Query: 294 YVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV-FQKLLPNSMNQSXXXX 352
G A ++ + K G K D + F LL S +
Sbjct: 187 LCGKGSFTEAVALIDEIENK----------------GLKPDHITFNILLHESYTKGKFEE 230
Query: 353 XXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYT 412
++ ++ K + R Y + G + + V + + ++ + PD ++T
Sbjct: 231 GEQIW-ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE---LKPDVFTFT 286
Query: 413 TVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREM 469
++ V G +D A E+ + G + +N LL CK ++ A EL +E+
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ YT+++ GY +G++ D R+ + M + D + V+Y+ ++ + K+G M+RA
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHD---CVLNSVTYSRILEGVCKSGDMERA 254
Query: 428 RQVLAEMTRIG----VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
++LAEM + +S N +TY ++++ +C++ ++++A +L M P+ V+
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG-CMPNRVTAC 313
Query: 484 ILIDGCILVDDSAGALS 500
+LI G + D+ ALS
Sbjct: 314 VLIQGVLENDEDVKALS 330
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 396 MRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCK 455
++ D +PD ++YT++++ AG +D A ++ EM++ N +TY+ +L+G CK
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 456 QLQIDKARELLREMAED---AEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
+++A ELL EM ++ I P+ V+Y ++I AL + M RG P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 513 TKISYTTLMKAFALSGQP-KLAHRVFDEMV 541
+++ L++ + + K ++ D++V
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 407 DHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELL 466
D V+Y V+ G ++ A ++ EM +G+ + ITY ++ GYC +ID A L
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 467 REMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG----IAPTKISYTTLMK 522
+EM++ + + V+Y+ +++G D AL EM I+P ++YT +++
Sbjct: 224 KEMSKH-DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 523 AFALSGQPKLAHRVFDEMVN 542
AF + + A V D M N
Sbjct: 283 AFCEKRRVEEALLVLDRMGN 302
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 102/243 (41%), Gaps = 40/243 (16%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+Y MK + KS + + ++ + M + PD+ ++TT++S + G RA +
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLER---GIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
+M+ G + +T ++ Y + +D A L + A + + D V+++ LI +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLY-DRARTEKWRIDAVTFSTLIRIYGV 292
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+ G L+ + EM+A G+ P + Y L+ + + +P A ++ +++
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT--------- 343
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
NGF P+ TY + AR +AL ++ E+
Sbjct: 344 ---------------------------NGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 612 KER 614
KE+
Sbjct: 377 KEK 379
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 128/343 (37%), Gaps = 54/343 (15%)
Query: 199 RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKL 258
K+ D + +PD F +++ +G K ++ F++M FG PD ++ ++
Sbjct: 195 EKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 259 CCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLC 318
R D+ + + +R + + T +L+ Y G+ D I + M+
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKA------ 308
Query: 319 RILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK 378
+G K + V L +SM ++ + L+ +TPN Y L++
Sbjct: 309 ----------LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 379 GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIG 438
Y GR A + D A + EM G
Sbjct: 359 AY---GR-----------------------------------ARYGDDALAIYREMKEKG 380
Query: 439 VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGA 498
+S I YN LL +D+A E+ ++M PD +++ LI + A
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 499 LSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+ +MR G PT T++++ + + Q R FD+++
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 100/246 (40%), Gaps = 4/246 (1%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ ++ Y ++G V + + + R + D V+++T++ +G D
Sbjct: 243 PDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK---WRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ EM +GV N + YN L+ + + +A+ + +++ + P+ +Y L+
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG-FTPNWSTYAALVR 358
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
AL+ + EM+ +G++ T I Y TL+ A + A +F +M N
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 548 VDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALIL 607
D ++ L+ Y G GF P + S A++ + +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478
Query: 608 WNEVKE 613
+++V E
Sbjct: 479 FDQVLE 484
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 146/359 (40%), Gaps = 51/359 (14%)
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLV--FVLE 273
A+N +++ A+ G + L LF EM + PD +++ +M C D +++ V
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMN-ACSADSSNVVYGRMVHA 229
Query: 274 RILEQNVPLCMTTLHSLVAAYVDFG-------DLDTAEIIVQAMREKRRDLCRILRESNS 326
+L+ + +S+++ Y G +L++ E++ Q D C + E+
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE- 288
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
K VF L P+ N +TT++ GY ++G
Sbjct: 289 -----KALEVFH----------------------LAPEK---NIVTWTTMITGYGRNGDG 318
Query: 387 SDTVR-MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+R +E M+ DS DH +Y V+ A + + + + G
Sbjct: 319 EQALRFFVEMMKSGVDS----DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
N L+ Y K I +A ++A D+VS+N ++ + + AL ++ M
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIA-----NKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
A GI P +++ L+ + SG + +F+ MV D R+ +++ +++ + R G
Sbjct: 430 IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGG 488
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 41/338 (12%)
Query: 209 DSRP--DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKD 266
D P DT A+N +L + + G + + LF ++ PD S+ ++ C
Sbjct: 28 DGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVK 87
Query: 267 LLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNS 326
+ ++ + +SL+ Y D +A + RD+C
Sbjct: 88 FGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF-------RDMC-------- 132
Query: 327 EYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRV 386
+N+ + LL MN V+ +PK + ++ G+ G++
Sbjct: 133 --CDSRNEVTWCSLLFAYMNAEQFEAALDVFVE--MPKRV---AFAWNIMISGHAHCGKL 185
Query: 387 SDTVRMLEAMRRQDDSASHPDHVSYTTVVSAL-VKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + + M +S PD +++++++A + + R V A M + G S+
Sbjct: 186 ESCLSLFKEML---ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
N +L Y K D A +RE+ E E+ VS+N +ID C+ + ++ AL F+
Sbjct: 243 KNSVLSFYTKLGSRDDA---MREL-ESIEVLTQ-VSWNSIIDACMKIGETEKALEVFH-- 295
Query: 506 RARGIAPTK--ISYTTLMKAFALSGQPKLAHRVFDEMV 541
+AP K +++TT++ + +G + A R F EM+
Sbjct: 296 ----LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y N +Y T++ KS RV + ++E M+ +DS D V + +V+ +AG ++
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMK--EDSCECKDSV-FASVIRTFSRAGRLE 98
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A + + ++++ LL+ K+ +++ A + R+ E+ + + N+L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM---VN 542
+ V+ S A F EM +G P + SY LMK F L G+ + A + M ++
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF--------HPDVGTYGSFANG 594
D++ + +L++ C G G H + G + S + G
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 595 IALARK 600
I ++
Sbjct: 279 IERVKR 284
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 31/320 (9%)
Query: 253 NIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE 312
N++MK+ C+ +R DL V + + Q + L+ + G L+ A ++ +M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM-- 213
Query: 313 KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
RI ++ + E D V ++L +++ + +L K R
Sbjct: 214 ----FWRISQKGSGE------DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 373 YTTLMKGYMKSGR--VSDTVRML-EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
Y + G+ +S + R+L E + R + P SY+ + + L + G + +
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIR----GAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
VL M G Y +K C+ ++ +A ++ + P V YN+LI G
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG- 378
Query: 490 ILVDD--SAGALSFFNEMRAR-GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV---ND 543
L DD S A+ + +M + + +Y TL+ GQ A +V +EM+ +
Sbjct: 379 -LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 544 PRVKVDLIAWNMLVEGYCRL 563
P V+ ++M+++G C +
Sbjct: 438 PGVE----TYHMMIKGLCDM 453
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
Y N +Y T++ KS RV + ++E M+ +DS D V + +V+ +AG ++
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMK--EDSCECKDSV-FASVIRTFSRAGRLE 98
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A + + ++++ LL+ K+ +++ A + R+ E+ + + N+L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM---VN 542
+ V+ S A F EM +G P + SY LMK F L G+ + A + M ++
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 543 DPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGF--------HPDVGTYGSFANG 594
D++ + +L++ C G G H + G + S + G
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 595 IALARK 600
I ++
Sbjct: 279 IERVKR 284
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 31/320 (9%)
Query: 253 NIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE 312
N++MK+ C+ +R DL V + + Q + L+ + G L+ A ++ +M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM-- 213
Query: 313 KRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRI 372
RI ++ + E D V ++L +++ + +L K R
Sbjct: 214 ----FWRISQKGSGE------DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 373 YTTLMKGYMKSGR--VSDTVRML-EAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQ 429
Y + G+ +S + R+L E + R + P SY+ + + L + G + +
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIR----GAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 430 VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
VL M G Y +K C+ ++ +A ++ + P V YN+LI G
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG- 378
Query: 490 ILVDD--SAGALSFFNEMRAR-GIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV---ND 543
L DD S A+ + +M + + +Y TL+ GQ A +V +EM+ +
Sbjct: 379 -LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 544 PRVKVDLIAWNMLVEGYCRL 563
P V+ ++M+++G C +
Sbjct: 438 PGVE----TYHMMIKGLCDM 453
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 153/368 (41%), Gaps = 25/368 (6%)
Query: 211 RPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVF 270
+PD N VL A S + + L+ EM + GV PD ++ V+K C + + +
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 271 VLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIG 330
+++ L ++L+ + + GDL A + + + + ++
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKR-- 191
Query: 331 GKNDSVFQ---------KLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYM 381
GK D + ++ N M L + + + ++ GY+
Sbjct: 192 GKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYV 251
Query: 382 KSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSA 441
G + + + + MR D+ HPD V+ +++SA G ++ +++ + +
Sbjct: 252 NCGYPKEALGIFKEMR---DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 442 NRI-----TYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSA 496
+ I +N L+ Y K ID+A E+ R + + D+ ++N LI G L +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD-----RDLSTWNTLIVGLAL-HHAE 362
Query: 497 GALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNML 556
G++ F EM+ + P ++++ ++ A + SG+ + F M + ++ ++ + +
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422
Query: 557 VEGYCRLG 564
V+ R G
Sbjct: 423 VDMLGRAG 430
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 41/294 (13%)
Query: 400 DDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQI 459
DDSA V+++++ S K G +D A ++ EM +++ +N+++ G K ++
Sbjct: 171 DDSAK-AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEM 225
Query: 460 DKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTT 519
D AREL E DVV++N +I G + AL F EMR G P ++ +
Sbjct: 226 DSARELFDRFTE-----KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 520 LMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA----WNMLVEGYCRLGXXXXXXXXXXX 575
L+ A A+ G + R+ ++ V + WN L++ Y + G
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 576 XXXNGFHPDVGTYGSFANGIALARKPG--------EALILW-NEV-----------KERW 615
D+ T+ + G+AL G + L +W NEV R
Sbjct: 341 VKDR----DLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRV 396
Query: 616 EAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPN 669
+ GR + + ++P+ + D+ RA +A V M+ I PN
Sbjct: 397 DEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPN 447
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 67/289 (23%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +NAVLNAC + + ++ Q G P ++Y ++M++ ++ +L+
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
++ + ++P + AY R+L N+ + G
Sbjct: 651 FRKMQKSSIPNAL--------AY------------------------RVL--VNTLWKEG 676
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
K+D + + + + +Y L + +GR ++ +
Sbjct: 677 KSDEAVHTV------------------EDMESRGIVGSAALYYDLARCLCSAGRCNEGLN 718
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
ML+ + R A+ P V+YT ++ A V +G + A + +M ++ S N +T NI+LK
Sbjct: 719 MLKKICR---VANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLK 774
Query: 452 GYCKQLQIDKARELLREMAED-----------AEIQPDVVSYNILIDGC 489
Y + ++AREL ++M+ED + + PD ++N ++D C
Sbjct: 775 AYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTC 823
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
IYTT + KS R + + + AM Q +S+PD V+Y ++ L +AG + V+
Sbjct: 509 IYTTALNVLGKSRRPVEALNVFHAMLLQ--ISSYPDMVAYRSIAVTLGQAGHIKELFYVI 566
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
M K K ++K D ++PDVV YN +++ C+
Sbjct: 567 DTMRSPP------------KKKFKPTTLEKW---------DPRLEPDVVVYNAVLNACVQ 605
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
GA +++ RG P+ ++Y +M+ + L H F +M
Sbjct: 606 RKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM 654
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 398 RQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQL 457
R+ +S P+ ++Y +V+ L K G D A + +M G+ + Y L + C
Sbjct: 652 RKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAG 711
Query: 458 QIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISY 517
+ ++ +L+++ A +P VV+Y LI C+ + A F++M+ + +P ++
Sbjct: 712 RCNEGLNMLKKICRVAN-KPLVVTYTGLIQACVDSGNIKNAAYIFDQMK-KVCSPNLVTC 769
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVND 543
++KA+ G + A +F +M D
Sbjct: 770 NIMLKAYLQGGLFEEARELFQKMSED 795
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 365 PYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFM 424
P+ + IY +M G++KSG ++ R+ + M +H +++TT++ +
Sbjct: 171 PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM-------THKTVITWTTMIHGYCNIKDI 223
Query: 425 DRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
D AR++ M N +++N ++ GYC+ Q + L +EM + PD ++
Sbjct: 224 DAARKLFDAMPE----RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD----DV 275
Query: 485 LIDGCILVDDSAGALSFFNE-----MRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDE 539
I + GALS R + K+ T ++ ++ G+ + A R+FDE
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC-TAILDMYSKCGEIEKAKRIFDE 334
Query: 540 MVNDPRVKVDLIAWNMLVEGY 560
M P +V +WN ++ GY
Sbjct: 335 M---PEKQV--ASWNAMIHGY 350
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
+P ++ + +++K Y+++ + D+ + +R++ + PD+ ++TT+ + +
Sbjct: 36 RPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE--TCFAPDNFTFTTLTKSCSLSMC 93
Query: 424 MDRARQVLAEMTRIGVSAN-------------------------------RITYNILLKG 452
+ + Q+ +++ R G A+ +++ L+ G
Sbjct: 94 VYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISG 153
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
Y + ++D A +L +M DVV YN ++DG + D A F+EM +
Sbjct: 154 YIRCGELDLASKLFDQMPH----VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK---- 205
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
T I++TT++ + A ++FD M P + +L++WN ++ GYC+
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAM---P--ERNLVSWNTMIGGYCQ 250
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 155/397 (39%), Gaps = 43/397 (10%)
Query: 176 SRLASSGDSVEALGLFRAVTRRLR----------KITDPDVAAD-----SRPDTGAFNAV 220
SRL S G +V ++G+ +R R K D D A S ++ ++
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 221 LNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNV 280
+ A G ++LF+EM + G+ PD + V+ C R D V E I E ++
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 281 PLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKND------ 334
+ ++L+ Y G + AE++ MR K D+ S + IGG +
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK--DII-----SWNTIIGGYSKNCYANE 481
Query: 335 --SVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMK-GYMKSGRVSDTV- 390
S+F LL V + I+ +M+ GY V++++
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 391 -------RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
+L A DD AS D VS+T +++ GF A + +M + G+ A+
Sbjct: 542 DMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
I++ LL +D+ M + +I+P V Y ++D D A F
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
M I P + L+ + KLA +V +++
Sbjct: 661 NMP---IPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 55/357 (15%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK----LCCRKDRKDLLVFVL 272
+N ++N A SGD + LF +M GV D+ +++ V K L + L F+L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 273 ERIL-EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCR---ILRESNSEY 328
+ E+N + +SLVA Y+ +D+A + M E RD+ I+ S
Sbjct: 223 KSGFGERN-----SVGNSLVAFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNG 275
Query: 329 IGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSD 388
+ K SVF ++L + + + V+ ++R+ + GR
Sbjct: 276 LAEKGLSVFVQMLVSGI-EIDLATIVSVFAG-------CADSRLISL--------GRAVH 319
Query: 389 TVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNI 448
++ + R+D + T++ K G +D A+ V EM+ V ++Y
Sbjct: 320 SIGVKACFSREDRFCN--------TLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTS 367
Query: 449 LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI---LVDDSAGALSFFNEM 505
++ GY ++ +A +L EM E+ I PDV + +++ C L+D+ + E
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE- 425
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCR 562
+ LM +A G + A VF EM RVK D+I+WN ++ GY +
Sbjct: 426 --NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM----RVK-DIISWNTIIGGYSK 475
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ T++ GY K+ ++ + + + ++ PD + V+ A D+ R++
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLL--LEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+ R G ++R N L+ Y K + LL M D D+VS+ ++I G +
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGAL-----LLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A++ FN+MR GI +IS+ +L+ A + SG R F+ M ++ +++ +
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 553 WNMLVEGYCRLG 564
+ +V+ R G
Sbjct: 639 YACIVDMLARTG 650
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 7/237 (2%)
Query: 367 TPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDR 426
P+ + Y+ L++G+ + S ++ + M ++ D ++Y ++ AL K+G +D
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV---DLLAYNALLDALCKSGDVDG 261
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
++ EM +G+ + ++ I + YC + A ++L M ++ P+V ++N +I
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR-YDLVPNVYTFNHII 320
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRV 546
+ A +EM +G P +Y ++M + A ++ M + +
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM-DRTKC 379
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
D +NM+++ R+G F+P V TY +G L RK G+
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGK 434
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 123/319 (38%), Gaps = 56/319 (17%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P ++ ++ A D ++FDEM + V D L+YN ++ C+ D +
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
+ + + + + AY D GD+ +A ++ M KR DL
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM--KRYDL-------------- 309
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
PN + ++K K+ +V D
Sbjct: 310 -----------------------------------VPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+L+ M ++ ++PD +Y ++++ ++RA ++L+ M R +R TYN++LK
Sbjct: 335 LLDEMIQK---GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDS-AGALSFFNEMRARGI 510
+ + D+A E+ M+E + P V +Y ++I G + A +F M GI
Sbjct: 392 LLIRIGRFDRATEIWEGMSE-RKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Query: 511 APTKISYTTLMKAFALSGQ 529
P + L GQ
Sbjct: 451 PPYSTTVEMLRNRLVGWGQ 469
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 22/284 (7%)
Query: 411 YTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMA 470
+ V A +A A + M G+ + LL C + ++ A+E + A
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK-A 199
Query: 471 EDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQP 530
+ I P +Y+IL+ G + D++GA F+EM R ++Y L+ A SG
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 531 KLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGS 590
+++F EM N +K D ++ + + YC G P+V T+
Sbjct: 260 DGGYKMFQEMGN-LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 591 FANGIALARKPGEALILWNEVKER------WEAGR------DRENSDSSVPPLK------ 632
+ K +A +L +E+ ++ W D + + L
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 633 --PDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKTKFT 674
PD + + + +R F +A EI M E P +T
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYT 422
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 120/286 (41%), Gaps = 31/286 (10%)
Query: 152 AASVVKSMLRSGYLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSR 211
A V ML + + A++A++ L SGD +F+ + +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN-----------LGLK 275
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +F ++A ++GD ++ D M ++ +VP+ ++N ++K C+ ++ D +
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+ ++++ T +S++A + D +++ A ++ M D + L + ++
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM-----DRTKCLPDRHT----- 385
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYM-KSGRVSDTV 390
+ +L + +++ + + + P YT ++ G + K G++ +
Sbjct: 386 -----YNMVLKLLIRIGRFDRATEIWE-GMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 391 RMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTR 436
R E M D P + + + LV G MD + +M R
Sbjct: 440 RYFEMMI---DEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 165/380 (43%), Gaps = 37/380 (9%)
Query: 199 RKITDPDVAADSRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKL 258
R I + + + +P+ N+++N NS D L+++ M V D SYNI++K
Sbjct: 287 RYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKT 344
Query: 259 CCRKDRKDLL--VFVLERILEQN--VPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKR 314
CC R DL ++ + +E + + L T +++ + D A++ A++ K
Sbjct: 345 CCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFAD------AKMWKWALKVK- 397
Query: 315 RDLCRILRESNSEYIG-GKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIY 373
+ + +G N + L+ N +++ +L PN++ +
Sbjct: 398 ---------DDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEE-MLASGCEPNSQCF 447
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQ--DDSASHPDHVSY--TTVVSALVKAG---FMDR 426
L+ +++ + R+ ++ + ++S D VS T+ + L G ++R
Sbjct: 448 NILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNR 507
Query: 427 ARQ--VLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNI 484
+ R TYNILLK + +EL+ EM + + P+ ++++
Sbjct: 508 NSNSPYIQASKRFCFKPTTATYNILLKACGTDYY--RGKELMDEM-KSLGLSPNQITWST 564
Query: 485 LIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
LID C D GA+ M + G P ++YTT +K A + KLA +F+EM
Sbjct: 565 LIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEM-RRY 623
Query: 545 RVKVDLIAWNMLVEGYCRLG 564
++K + + +N L++ + G
Sbjct: 624 QIKPNWVTYNTLLKARSKYG 643
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
+Y + + GR + + +AMR ++ PD+++Y+ +V L KA ++ AR VL
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMR---NAGYEPDNITYSQLVFGLCKAKRLEEARGVL 428
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDA-EIQPDVVSYNILIDGCI 490
+M G + T+ IL++G+CK ++DKA M E +I +++ ++LIDG +
Sbjct: 429 DQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL--DVLIDGFV 486
Query: 491 LVDDSAGALSFFNEM-RARGIAPTKISYTTLM 521
+ + GA F EM + + P + +Y L+
Sbjct: 487 IHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ P+ P+ + + L++ Y+ D + R+ + + Y + +L
Sbjct: 324 MMDGPFKPSIQDCSLLLR-YLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G D A ++ M G + ITY+ L+ G CK ++++AR +L +M E PD+
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM-EAQGCFPDIK 441
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
++ ILI G ++ AL+ F M +G L+ F + + + A EM
Sbjct: 442 TWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501
Query: 541 VNDPRVKVDLIAWNMLVEGYCRL 563
V + VK + +L++ ++
Sbjct: 502 VKNANVKPWQSTYKLLIDKLLKI 524
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 5/222 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ P+ RI+ L+ G+ +S ++ ++ E M+ + P V+Y T++ + +
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMN---VKPTVVTYGTLIEGYCRMRRVQ 302
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A +VL EM + N + +N ++ G + ++ +A ++ E P +V+YN L
Sbjct: 303 IAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV-CESGPTIVTYNSL 361
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ D GA M RG+ PT +Y K F+ + + ++ +++
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGT 587
D + ++++++ C G G PD+ T
Sbjct: 422 -SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLT 462
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
R+ L+ K G V + LE + DS P + +++ ++ + +A ++
Sbjct: 213 RLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
EM + V +TY L++GYC+ ++ A E+L EM + AE++ + + +N +IDG
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM-KMAEMEINFMVFNPIIDGLG 331
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+ AL PT ++Y +L+K F +G A ++ M+
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P Y +L+K + K+G + ++L+ M + P +Y K +
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTR---GVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ ++ G S +R+TY+++LK C+ ++ A ++ +EM ++ I PD+++ +LI
Sbjct: 410 MNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEM-KNRGIDPDLLTTTMLIH 468
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
++ A F+ RGI P I++ + G +A R+ M + P K
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSK 528
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 427 ARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
A L M +G+ + + Y L+ GY ++DKA+E+ REM ++ P+V +YN +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMI 766
Query: 487 DGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
G + + A EM +RG P + Y+TL+ +G+ A +V EMV
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
G+ + + L + + P + YTT++ V +G +D+A+++ EMT G N
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILI 486
TYN +++G C + +A LL+EM E P+ V Y+ L+
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEM-ESRGCNPNFVVYSTLV 801
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 8/223 (3%)
Query: 395 AMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEM-TRIGVSANRITYNILLKGY 453
A R++ + P+ ++ ++ AL K G + +L M R+ AN T+N+L G+
Sbjct: 221 AKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDAN--TFNVLFFGW 278
Query: 454 CKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI---LVDDSAGALSFFNEMRARGI 510
C+ KA +LL EM E A +P+ +Y ID +VD++A F +
Sbjct: 279 CRVRDPKKAMKLLEEMIE-AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 511 APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXX 570
APT ++ ++ A A + + + + M++ + D+ + ++EG C
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLP-DVSTYKDVIEGMCMAEKVDEAY 396
Query: 571 XXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKE 613
G+ PD+ TY F + RK EAL L+ + E
Sbjct: 397 KFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE 439
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P + + ++ K+ + + E + R + PD +Y V+ + A +D A
Sbjct: 339 PTAKTFALMIVALAKNDKAEEC---FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
+ L EM+ G + +TYN L+ C+ + D+A +L M E + P V +YN+LI
Sbjct: 396 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE-SRCAPSVQTYNMLIS 454
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
+DD GA + + EM R +Y ++ + K A + +E+VN
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVN 509
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 37/251 (14%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
++ + P Y + + ++G V + + + M + + S P ++ ++ AL K
Sbjct: 294 MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAK 353
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
+ +++ M G + TY +++G C ++D+A + L EM+ PD+V
Sbjct: 354 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG-YPPDIV 412
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
+YN + + AL + M AP+ +Y L+ F P A + EM
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARK 600
D R V DV TY + NG+ +
Sbjct: 473 --DKRDCVQ----------------------------------DVETYCAMINGLFDCHR 496
Query: 601 PGEALILWNEV 611
EA L EV
Sbjct: 497 AKEACFLLEEV 507
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 12/175 (6%)
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+N+LL CK + + LLR M ++PD ++N+L G V D A+ EM
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRH--RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM------VNDPRVKVDLIAWNMLVEG 559
G P +Y + F +G A +FD M V+ P K + +++
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK----TFALMIVA 350
Query: 560 YCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKER 614
+ G PDV TY G+ +A K EA +E+ +
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 144/353 (40%), Gaps = 35/353 (9%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
PD +F VL ACA + Q+ + G+V D N ++ + R ++ V
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L+R+ ++ + +SL++AY++ G +D A + M E+ ES + I G
Sbjct: 198 LDRMPVRDA----VSWNSLLSAYLEKGLVDEARALFDEMEERNV-------ESWNFMISG 246
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ K + +P + + ++ Y G ++ +
Sbjct: 247 YAAAGLVKEAKEVFDS--------------MP---VRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M DDS PD + +V+SA G + + V + + G+ L+
Sbjct: 290 VFNKM--LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVD 347
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
Y K +IDKA E+ R A + DV ++N +I + AL F+EM G
Sbjct: 348 MYSKCGKIDKALEVFR-----ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
P I++ ++ A G A ++F+ M + RV+ + + +V+ R+G
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMG 455
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y +L + +PN + ++++ Y S S L R PD S+T V+
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANS---STPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 417 ALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQ 476
A + RQ+ + G+ + N L+ Y + + AR++L M
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP-----V 203
Query: 477 PDVVSYNILIDGCI---LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLA 533
D VS+N L+ + LVD+ A + F+EM R + S+ ++ +A +G K A
Sbjct: 204 RDAVSWNSLLSAYLEKGLVDE---ARALFDEMEERNVE----SWNFMISGYAAAGLVKEA 256
Query: 534 HRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
VFD M V+ D+++WN +V Y +G
Sbjct: 257 KEVFDSM----PVR-DVVSWNAMVTAYAHVG 282
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 409 VSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLRE 468
V +T+++S K G++D AR + M N +T N +L GY K ++++A L RE
Sbjct: 78 VYWTSLLSKYAKTGYLDEARVLFEVMPE----RNIVTCNAMLTGYVKCRRMNEAWTLFRE 133
Query: 469 MAEDAEIQPDVVSYNILIDGCILVDD--SAGALSFFNEMRARGIAPTKISYTTLMKAFAL 526
M + +VVS+ +++ L DD S A+ F+EM R + +S+ TL+
Sbjct: 134 MPK------NVVSWTVMLTA--LCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIR 181
Query: 527 SGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGY 560
+G + A +VFD M + D+++WN +++GY
Sbjct: 182 NGDMEKAKQVFDAMPSR-----DVVSWNAMIKGY 210
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 362 LPKPYTPNTRIY-TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+P+ + N +Y T+L+ Y K+G + + + E M ++ V+ +++ VK
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI-------VTCNAMLTGYVK 120
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
M+ A + EM + N +++ ++L C + + A EL EM E +VV
Sbjct: 121 CRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPE-----RNVV 170
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
S+N L+ G I D A F+ M +R + +S+ ++K + + + A +F +M
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 541 VNDPRVKVDLIAWNMLVEGYCRLG 564
+++ W +V GYCR G
Sbjct: 227 SEK-----NVVTWTSMVYGYCRYG 245
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%), Gaps = 28/195 (14%)
Query: 368 PNTRIYT--TLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
P I T ++ GY+K R+++ + M + + VS+T +++AL G +
Sbjct: 104 PERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK--------NVVSWTVMLTALCDDGRSE 155
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A ++ EM N +++N L+ G + ++KA+++ DA DVVS+N +
Sbjct: 156 DAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVF-----DAMPSRDVVSWNAM 206
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
I G I D A F +M + + +++T+++ + G + A+R+F EM P
Sbjct: 207 IKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEM---P- 258
Query: 546 VKVDLIAWNMLVEGY 560
+ ++++W ++ G+
Sbjct: 259 -ERNIVSWTAMISGF 272
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+T+++ GY+++G VS + + + +D V++T ++S LV+ A +L+
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDKDG-------VTWTVMISGLVQNELFAEAASLLS 455
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAE-DAEIQPDVVSYNILIDGCIL 491
+M R G+ TY++LL +D+ + + +A+ A PD++ N L+
Sbjct: 456 DMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS---- 511
Query: 492 VDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ GA+ E+ A+ + +S+ +++ + G A +F EM++ +
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD +Y ++ ++G + ++AEM R G+ N ++ +++ G+ + + D+ +
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
+L M +D + V +YNI I S A + + M + G+ P ++Y+ L+ F
Sbjct: 244 VL-AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
+ A ++F MVN K D + L+ C+ G + P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRG-CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 585 VGTYGSFANGIALARKPGEALILWNEVKERW 615
S NG+A K EA L +VKE++
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKF 392
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 26/308 (8%)
Query: 357 YQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVS 416
Y + PN+ +Y T+++ +S + +R M ++++ P ++++ ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 417 ALVKAGFMDRARQVLAEMTRIGV--SANRITYNILLKGYCKQLQIDKARELLREMAEDAE 474
A +KA F +Q+ + + GV S + + +L + Y + + AR++ E+
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVL-RIYVEDKLLLDARKVFDEIP---- 179
Query: 475 IQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAH 534
QPDVV +++L++G + + L F EM +G+ P + S TT + A A G
Sbjct: 180 -QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238
Query: 535 RVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANG 594
+ + + ++ D+ LV+ Y + G G +A
Sbjct: 239 WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA-A 297
Query: 595 IALARKPGEALILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKA 654
A+K L ER E RE+ +KPD +L + C F +
Sbjct: 298 YGYAKKAMTCL-------ERLE----REDG------IKPDSVVLLGVLAACAHGGFLEEG 340
Query: 655 LEIVACME 662
++ ME
Sbjct: 341 RSMLENME 348
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 149/350 (42%), Gaps = 36/350 (10%)
Query: 164 YLPHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNA 223
YLP + + + L D V LF + + D ++ A+N V+
Sbjct: 201 YLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQ--------DSSSHGDLSFNAYNQVIQY 252
Query: 224 CANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLC 283
A + ++ F + + G D +YN +M L K + E + + + L
Sbjct: 253 LAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLD 312
Query: 284 MTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPN 343
+T ++ + G LD A + Q M+E++ LR S S VF L+ +
Sbjct: 313 GSTYELIIPSLAKSGRLDAAFKLFQQMKERK------LRPSFS---------VFSSLV-D 356
Query: 344 SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSA 403
SM ++ + + P+ ++ +L+ Y K+G++ +R+ + M++ S
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK---SG 413
Query: 404 SHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAR 463
P+ YT ++ + K+G ++ A V +M + G TY+ LL+ + Q+D A
Sbjct: 414 FRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAM 473
Query: 464 ELLREMAEDAEIQPDVVSYNILIDGCILVD----DSAGALSFFNEMRARG 509
++ M +A ++P + SY L+ +L + D AG + EM+A G
Sbjct: 474 KIYNSMT-NAGLRPGLSSYISLL--TLLANKRLVDVAGKILL--EMKAMG 518
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y ++ KSGR+ ++ + M+ + P ++++V ++ KAG +D + +V
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERK---LRPSFSVFSSLVDSMGKAGRLDTSMKVYM 372
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
EM G + + L+ Y K ++D A L EM + +P+ Y ++I+
Sbjct: 373 EMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSG-FRPNFGLYTMIIESHAKS 431
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
A++ F +M G PT +Y+ L++ A SGQ A ++++ M N
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 6/225 (2%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPD--HVSYTTVVSALVKAGF 423
Y P+ Y L G + + E M + DS+SH D +Y V+ L KA
Sbjct: 201 YLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQ--DSSSHGDLSFNAYNQVIQYLAKAEK 258
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
++ A + G + TYN L+ + + KA E+ M E + D +Y
Sbjct: 259 LEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM-EKTDSLLDGSTYE 317
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
++I A F +M+ R + P+ +++L+ + +G+ + +V+ EM
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGF 377
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTY 588
+ + L++ Y + G +GF P+ G Y
Sbjct: 378 GH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 366 YTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
+ N +T ++ GY KSGR S+ + + + M ++ PD V+ V+SA G ++
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN---VEPDEVTLLAVLSACADLGSLE 267
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
++ + + G++ N ++ Y K I KA ++ + E +VV++ +
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE-----RNVVTWTTI 322
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM 540
I G A AL+ FN M G+ P +++ ++ A + G L R+F+ M
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ L+ G+ + + + + M R P H SY ++ A GF+++ + V A
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRD---GFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M + G N LL Y K I AR++ +A + DVVS+N L+
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-----KRDVVSWNSLLTAYAQH 341
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSG 528
A+ +F EMR GI P +IS+ +++ A + SG
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 50/354 (14%)
Query: 234 LQLFDEMPQFGVVPDALSYNIVMKLCCRKDR----KDLLVFVLERILEQNVPLCMTTLHS 289
L F++M +FG P+ + + V+K + R L F ++ + NV + +
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS----A 201
Query: 290 LVAAYVDFGDLDTAEIIVQAMREKRRD------LCRILRESNSEYIGGKNDSVFQKLLPN 343
L+ Y +G +D A+++ A+ E R D + R S +E K +FQ +L +
Sbjct: 202 LLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSGTE----KALELFQGMLRD 256
Query: 344 SMNQSXXXXXX---XVYQPPLLPKPYTPNTRIY-----------TTLMKGYMKSGRVSDT 389
S L + + + TL+ Y KSG + D
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 390 VRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNIL 449
++ + + ++D VS+ ++++A + GF A EM R+G+ N I++ +
Sbjct: 317 RKIFDRLAKRDV-------VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 450 LKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG 509
L +D+ M +D I P+ Y ++D D AL F EM
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDLNRALRFIEEM---P 425
Query: 510 IAPTKISYTTLMKAFALSGQPKL----AHRVFDEMVNDPRVKVDLIAWNMLVEG 559
I PT + L+ A + +L A VF+ +DP V I +N+ G
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV--ILYNIYASG 477
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 48/227 (21%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSA--------------- 417
+TTL+ GY + R D + M R S P+ + ++V+ A
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYS---PNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 418 -LVKAGF---MDRARQVLAEMTRIGV------------SANRITYNILLKGYCKQLQIDK 461
VK GF + +L TR G+ S N +++N L+ G+ ++ +K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 462 ARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTK----ISY 517
A EL + M D +P SY L C S G L + A I + +
Sbjct: 246 ALELFQGMLRDG-FRPSHFSYASLFGAC----SSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 518 TTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
TL+ +A SG A ++FD + K D+++WN L+ Y + G
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRL-----AKRDVVSWNSLLTAYAQHG 342
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 12/291 (4%)
Query: 364 KPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGF 423
K + P+ + YT L++G+ G+ + +R+ E R D PD V+Y +++A KA
Sbjct: 226 KRFEPDIKSYTILLEGW---GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 424 MDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYN 483
+ A + EM + + + L+ G + +++ A E E ++ + + +YN
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF-ERSKSSGFPLEAPTYN 341
Query: 484 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
L+ A +EMR +G+ P +Y ++ + K A+ V+ M +
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE 401
Query: 544 PRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGE 603
P V + ++V +C G P + + S + K E
Sbjct: 402 PTVST----YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 604 ALILWNEVKERWEAG-RDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRK 653
A +NE+ + G R + S + DEG D + D+ V+ RK
Sbjct: 458 ACEYFNEM---LDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 7/233 (3%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ + + Y ++ +V + + A + ++ + + ++ L K+ + A++V
Sbjct: 165 FALISRRYARARKVKEAIG---AFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFD 221
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+M + + +Y ILL+G+ ++L + + E+ REM +D +PDVV+Y I+I+
Sbjct: 222 KMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM-KDEGFEPDVVAYGIIINAHCKA 280
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRV-FDEMVNDPRVKVDLI 551
A+ FFNEM R P+ + +L+ L + KL + F E ++
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLIN--GLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 552 AWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
+N LV YC G P+ TY + + ++ EA
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 41/353 (11%)
Query: 216 AFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKD----RKDLLVFV 271
A+NA+++ N G + L++ M G+ D +Y V++ C K + +V
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
L R +SLV+ Y G D A I + M K DL
Sbjct: 313 LRR-----EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK--DLVS------------ 353
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+ LL ++ +++ + N + ++ G ++G + ++
Sbjct: 354 -----WNALLSGYVSSGHIGEAKLIFK-----EMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ M+R+ P +++ + + G +Q A++ +IG ++ N L+
Sbjct: 404 LFSCMKRE---GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
Y K +++AR++ R M D VS+N LI A A+ + EM +GI
Sbjct: 461 MYAKCGVVEEARQVFRTMP-----CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
P +I+ T++ A + +G + FD M R+ + L++ CR G
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 156/423 (36%), Gaps = 90/423 (21%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P A + +VS +SGD A G+F +R DT +NA++ +
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMR-------------DTVMYNAMITGFS 124
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSY-NIVMKLCCRKDRKDLLVFVLERILEQNVPLCM 284
++ DG + LF +M G PD ++ +++ L D + V L+
Sbjct: 125 HNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 285 TTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSVFQKLLPNS 344
+ ++LV+ Y ++ ++ + R+ VF ++L
Sbjct: 185 SVSNALVSVY---SKCASSPSLLHSARK-----------------------VFDEILEK- 217
Query: 345 MNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSAS 404
+ R +TT+M GY+K+G +LE M DD+
Sbjct: 218 ------------------------DERSWTTMMTGYVKNGYFDLGEELLEGM---DDNMK 250
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ--LQIDKA 462
V+Y ++S V GF A +++ M G+ + TY +++ LQ+ K
Sbjct: 251 L---VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 463 RELLREMAEDAEIQPD--VVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTL 520
ED D +VS L C D+ A + F +M A+ + +S+ L
Sbjct: 308 VHAYVLRREDFSFHFDNSLVS---LYYKCGKFDE---ARAIFEKMPAKDL----VSWNAL 357
Query: 521 MKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNG 580
+ + SG A +F EM ++++W +++ G G G
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEK-----NILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 581 FHP 583
F P
Sbjct: 413 FEP 415
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N + L+KGY ++GRVS+ + + R D+ + P+ + T V+SA K G D +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFK--RMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 429 QVLAEMTRIGVSANRITYNI---LLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
V +G N++ N+ L+ Y K I+ A E+ + + + D++S+N +
Sbjct: 209 WVHKYGETLGY--NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-----RRDLISWNTM 261
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVND 543
I+G AL+ F+EM+ GI+P K+++ ++ A G + F+ M D
Sbjct: 262 INGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 39/295 (13%)
Query: 372 IYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVL 431
++ T++ GY++ G MLEA R D D +S+ TV+ G M+ +V
Sbjct: 92 LWNTMISGYIEMGN------MLEA-RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 432 AEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCIL 491
+M N ++N L+KGY + ++ + + M ++ + P+ + +++ C
Sbjct: 145 DDMPE----RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA- 199
Query: 492 VDDSAGALSFFNEMRARG--IAPTKISYTT---LMKAFALSGQPKLAHRVFDEMVNDPRV 546
GA F + G + K+ L+ + G ++A VF +
Sbjct: 200 ---KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK----- 251
Query: 547 KVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALI 606
+ DLI+WN ++ G G +G PD T+ G+ A K L+
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF----VGVLCACKH-MGLV 306
Query: 607 LWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
E G NS + + P+ + D+ RA F +A+E + M
Sbjct: 307 ---------EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ ++ G+ ++G +T+ M + D D VS ++V+SA ++ QV A
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLD---LPTDEVSLSSVISACASISSLELGEQVFA 474
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
T +G+ ++++ + L+ YCK ++ R + D ++ D V +N +I G
Sbjct: 475 RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF-----DTMVKSDEVPWNSMISGYATN 529
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
A+ F +M GI PT+I++ ++ A G + ++F+ M D D
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 553 WNMLVEGYCRLG 564
++ +V+ R G
Sbjct: 590 FSCMVDLLARAG 601
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 41/214 (19%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ T+++GYM SG ++R + M +D S+ VVS KAG + AR++
Sbjct: 96 WNTMIEGYMNSGEKGTSLRFFDMMPERDG-------YSWNVVVSGFAKAGELSVARRLFN 148
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
M V +T N LL GY ++A L +E+ D ++ ++ C +
Sbjct: 149 AMPEKDV----VTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKACAEL 200
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM------------ 540
+ ++ G+ ++L+ +A G ++A + +++
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALI 260
Query: 541 --------VNDPRVKVD------LIAWNMLVEGY 560
VN+ R D +I WN ++ GY
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
+T + L Y+++ R D + + + M+ D PD V+ + A G +D +
Sbjct: 178 DTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK 237
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
QV + G+S N L+ Y + +DKA ++ M E +VVS+ LI G
Sbjct: 238 QVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE-----RNVVSWTALISG 292
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEM-VNDPRVK 547
+ A+ FNEM GI+P + + T L+ A + SG FD M + ++K
Sbjct: 293 LAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 548 VDLIAWNMLVE 558
+L + +V+
Sbjct: 353 PNLHHYGCVVD 363
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 155/383 (40%), Gaps = 63/383 (16%)
Query: 213 DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVL 272
D G++NAV+ ACA +G ++F M + GV S+ V+K C L+ L
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCG-------LILDL 178
Query: 273 ERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIV------QAMREKRRDLCRILRESNS 326
R+L Q LH V Y G++D IV + M + RR I+ S+
Sbjct: 179 -RLLRQ--------LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDV 229
Query: 327 EY---------IGGKNDSV--FQKLLPNSM--------------NQSXXXXXXXVYQPPL 361
+ +G +++V F K+L ++ ++S V
Sbjct: 230 SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 362 LPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKA 421
+ +T + T++ Y+K R LE+ RR D D S+T+ +S +
Sbjct: 290 VKLSVVADTVVSTSVFDMYVKCDR-------LESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 422 GFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVS 481
G AR++ M N +++N +L GY + D+A + L M ++ E D V+
Sbjct: 343 GLTREARELFDLMPE----RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVT 397
Query: 482 YNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
+++ C + D + G I L+ + G + A+ F +M
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM- 456
Query: 542 NDPRVKVDLIAWNMLVEGYCRLG 564
++ R D ++WN L+ G R+G
Sbjct: 457 SELR---DEVSWNALLTGVARVG 476
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 38/250 (15%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
N + ++ GY+ + + + L MR++ ++ D+V+ +++ + +
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI---DNVTLVWILNVCSGISDVQMGK 415
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
Q + R G N I N LL Y K + A R+M+E D VS+N L+ G
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE----LRDEVSWNALLTG 471
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLM---------------KAFALSGQPKLA 533
V S ALSFF M+ P+K + TL+ F + K+
Sbjct: 472 VARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 534 HRVFDEMVN--------DPRVKV-------DLIAWNMLVEGYCRLGXXXXXXXXXXXXXX 578
+ MV+ D ++V DLI WN ++ G CR G
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 579 NGFHPDVGTY 588
G PD T+
Sbjct: 591 EGVKPDHVTF 600
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 130/314 (41%), Gaps = 73/314 (23%)
Query: 210 SRPDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMK--LCCRKDRKDL 267
S DT ++N++L +G+ + +LFDEMPQ D +S+N ++ CR+ K
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ----RDLISWNTMLDGYARCREMSKAF 236
Query: 268 LVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSE 327
+F E++ E+N + ++V Y GD++ A ++ M
Sbjct: 237 ELF--EKMPERNT----VSWSTMVMGYSKAGDMEMARVMFDKM----------------- 273
Query: 328 YIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVS 387
PL K N +T ++ GY + G +
Sbjct: 274 --------------------------------PLPAK----NVVTWTIIIAGYAEKGLLK 297
Query: 388 DTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYN 447
+ R+++ M S D + ++++A ++G + ++ + + R + +N N
Sbjct: 298 EADRLVDQMVA---SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN 354
Query: 448 ILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRA 507
LL Y K + KA ++ ++ + D+VS+N ++ G + A+ F+ MR
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIP-----KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 508 RGIAPTKISYTTLM 521
GI P K+++ ++
Sbjct: 410 EGIRPDKVTFIAVL 423
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 173/450 (38%), Gaps = 51/450 (11%)
Query: 212 PDTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFV 271
P+ N+++ A A + +F EM +FG+ D +Y ++K C + ++ +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 272 LERILEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGG 331
I + + + ++L+ Y G L + AM+ L E SE
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD----AMK---------LFEKMSERDTV 186
Query: 332 KNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVR 391
+S+ L+ + + Q L+ + T++ GY + +S
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLIS---------WNTMLDGYARCREMSKAFE 237
Query: 392 MLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLK 451
+ E M ++ VS++T+V KAG M+ AR + +M + N +T+ I++
Sbjct: 238 LFEKMPERNT-------VSWSTMVMGYSKAGDMEMARVMFDKMPL--PAKNVVTWTIIIA 288
Query: 452 GYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIA 511
GY ++ + +A L+ +M ++ D + ++ C + + + ++ +
Sbjct: 289 GYAEKGLLKEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 512 PTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXX 571
L+ +A G K A VF+++ K DL++WN ++ G G
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIP-----KKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 572 XXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
G PD T+ IA+ A ++ + G D S V L
Sbjct: 403 LFSRMRREGIRPDKVTF------IAVLCSCNHAGLI--------DEGIDYFYSMEKVYDL 448
Query: 632 KPDEGLLDTLADICVRAAFFRKALEIVACM 661
P L D+ R ++A+++V M
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 126/333 (37%), Gaps = 78/333 (23%)
Query: 369 NTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRAR 428
+ +I TTL+ Y +GR+ + ++ + M +DD +++TT+VSA + MD A
Sbjct: 903 HVKIQTTLIDFYSATGRIREARKVFDEMPERDD-------IAWTTMVSAYRRVLDMDSAN 955
Query: 429 QVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDG 488
+ +M+ N T N L+ GY +++A L +M D++S+ +I G
Sbjct: 956 SLANQMSE----KNEATSNCLINGYMGLGNLEQAESLFNQMP-----VKDIISWTTMIKG 1006
Query: 489 CILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKV 548
A++ F +M GI P +++ +T++ A A G ++ V + + V +
Sbjct: 1007 YSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-L 1065
Query: 549 DLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEALILW 608
D+ + LV+ Y + G + P + L W
Sbjct: 1066 DVYIGSALVDMYSKCGSLERAL------------------------LVFFNLPKKNLFCW 1101
Query: 609 NEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPP 668
N + E A F ++AL++ A ME + P
Sbjct: 1102 NSIIEGLAA------------------------------HGFAQEALKMFAKMEMESVKP 1131
Query: 669 NKTKFTRIYVEMHSRMFTSKHASRARQDRRVER 701
N F ++ HA + RR+ R
Sbjct: 1132 NAVTFVSVFT-------ACTHAGLVDEGRRIYR 1157
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
P+ ++ TL++GY +S ++V + M R+ PD S+ V+ A+ +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRK--GFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
Q+ + + G+ ++ L+ Y ++ AR++ EM QP++V++N +I
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-----QPNLVAWNAVIT 180
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
C +D AGA F++M R S+ ++ + +G+ + A R+F EM +
Sbjct: 181 ACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHR---- 232
Query: 548 VDLIAWNMLVEGYCRLG 564
D ++W+ ++ G G
Sbjct: 233 -DDVSWSTMIVGIAHNG 248
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 32/232 (13%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDD------------------- 401
+ K N + ++ GY+K+G + R+ M +DD
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 402 ---------SASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
+ P+ VS T V+SA ++G + + + + + G S N L+
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
Y + + AR + M E + +VS+ +I G + A+ FNEM A G+ P
Sbjct: 314 YSRCGNVPMARLVFEGMQE----KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
IS+ +L+ A + +G + F EM ++ ++ + +V+ Y R G
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 41/297 (13%)
Query: 374 TTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE 433
L+ Y K G+V D + +R + S+ +++++ V AG +D A + +E
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIE-------SWNSLITSFVDAGKLDEALSLFSE 385
Query: 434 MTRIG----VSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGC 489
+ + V AN +T+ ++KG Q + D + E R+M Q V N + C
Sbjct: 386 LEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM------QFSKVLANSVTICC 439
Query: 490 IL-VDDSAGALSFFNEMRARGI----APTKISYTTLMKAFALSGQPKLAHRVFDEMVNDP 544
IL + AL+ E+ I + + L+ +A G VF E + D
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF-EAIRDK 498
Query: 545 RVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEA 604
DLI+WN +++GY G +GFHPD GIAL A
Sbjct: 499 ----DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPD---------GIALV-----A 540
Query: 605 LILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
++ E GR+ S S L+P + + D+ R F ++A EIV M
Sbjct: 541 VLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT + L+ YMK G+ D ++ + M + + S+ +VS VK+G + RA
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR-------NLYSWNNMVSGYVKSGMLVRA 132
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
R V M V +++N ++ GY + + +A +E I+ + S+ L+
Sbjct: 133 RVVFDSMPERDV----VSWNTMVIGYAQDGNLHEALWFYKEFRRSG-IKFNEFSFAGLLT 187
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK 547
C+ ++ G + +++ A+A GQ + A R FDEM VK
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VK 243
Query: 548 VDLIAWNMLVEGYCRLG 564
D+ W L+ GY +LG
Sbjct: 244 -DIHIWTTLISGYAKLG 259
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
+L + N + +++ Y K G++ R + M +D H+ +TT++S K
Sbjct: 205 VLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI------HI-WTTLISGYAK 257
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G M+ A ++ EM N +++ L+ GY +Q ++A +L R+M ++P+
Sbjct: 258 LGDMEAAEKLFCEMPE----KNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQF 312
Query: 481 SYNILIDGCILVDDSAGALSFFNEMRA----RGIAPTKISYTTLMKAFALSGQPKLAHRV 536
+++ C+ S +L E+ + P I ++L+ ++ SG + + RV
Sbjct: 313 TFS----SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 537 FDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
F + +D K D + WN ++ + G
Sbjct: 369 F-RICDD---KHDCVFWNTMISALAQHG 392
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 150/393 (38%), Gaps = 40/393 (10%)
Query: 168 VKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACANS 227
V +W+ +V A G+ EAL ++ R K + +F +L AC S
Sbjct: 144 VVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF-----------SFAGLLTACVKS 192
Query: 228 GDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTL 287
++ Q ++ G + + + ++ + + + + + +++ + T
Sbjct: 193 RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT-- 250
Query: 288 HSLVAAYVDFGDLDTAEIIVQAMREKR-RDLCRILRESNSEYIGGKNDSVFQKLL----- 341
L++ Y GD++ AE + M EK ++ + G + +F+K++
Sbjct: 251 --LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 342 PNSMNQSXXXXXXXVY---------QPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRM 392
P S ++ PN + ++L+ Y KSG + + R+
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 393 LEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKG 452
R DD D V + T++SAL + G +A ++L +M + V NR T ++L
Sbjct: 369 F---RICDDK---HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 453 YCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAP 512
+++ M I PD Y LID L+ + ++ P
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLID---LLGRAGCFKELMRKIEEMPFEP 479
Query: 513 TKISYTTLMKAFALSGQPKLAHRVFDEMVN-DP 544
K + ++ + G +L + DE++ DP
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKKAADELIKLDP 512
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 356 VYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVV 415
V + LL + N R YT ++ Y K +V D R L +M+ + D V+ T +V
Sbjct: 151 VAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMK---NRGFLIDQVTLTAMV 207
Query: 416 SALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEI 475
KAG A + E+ +G + +Y ++ Y + +K LLREM + EI
Sbjct: 208 QLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREM-DSQEI 266
Query: 476 QPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHR 535
Y L+ + D+ GA F+ ++ GI P L+ A+++SGQ + A
Sbjct: 267 CAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARL 326
Query: 536 VFDEM 540
F+ M
Sbjct: 327 AFENM 331
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P+ ++ ++ ++ + A +L + ++ N YN ++ GY ++ +++ A ++
Sbjct: 461 PNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKV 520
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
L+EM E A+++PD V+++ LI+ C + A ++ EM+ G+ K Y +L+KA+A
Sbjct: 521 LKEMKE-ADVKPDSVTFSYLINYC---GEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYA 576
Query: 526 LSGQPKLAHRVF 537
GQ + A +V
Sbjct: 577 SCGQFEKAKQVL 588
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 242 QFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILEQNVPLCMTTLHSLVAAYVDFGDLD 301
+ +VP + SY ++ C + + ++E + E + + LHSL+ A + +
Sbjct: 386 ELDIVPSSTSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQILEFN 445
Query: 302 TAEIIVQAMREKR-RDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPP 360
+ I M K + R+S + I K+ +L N N +
Sbjct: 446 LVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNL----------- 494
Query: 361 LLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVK 420
PN+ +Y ++M GY + +V+ +++L+ M+ D PD V+++ +++
Sbjct: 495 ------APNSSMYNSIMAGYFREKKVNSALKVLKEMKEAD---VKPDSVTFSYLINY--- 542
Query: 421 AGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVV 480
G + EM + GV N+ Y L+K Y Q +KA+++L ++ A+ ++
Sbjct: 543 CGEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELK 602
Query: 481 SYNILIDGCILVDDSAGALSFFNEMR 506
S +LI + ALS + EM+
Sbjct: 603 S--VLISALASNGNITEALSIYEEMK 626
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
Y T + G ++ ++L + ++ S ++ +++S + G + + Q+ +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSA---FTFASLLSGVANVGSIRKGEQIHS 498
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
++ ++G+S N+ N L+ Y K ID A + M +V+S+ +I G
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-----NRNVISWTSMITGFAKH 553
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIA 552
+ L FN+M G+ P +++Y ++ A + G R F+ M D ++K +
Sbjct: 554 GFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH 613
Query: 553 WNMLVEGYCRLG 564
+ +V+ CR G
Sbjct: 614 YACMVDLLCRAG 625
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 115/296 (38%), Gaps = 31/296 (10%)
Query: 368 PNTRIYTTLMK--GYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMD 425
PN +++ K G + RV V + +A +R S S + +V+S VK+ M+
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQV-LGQAFKRGLASNSSVAN----SVISMFVKSDRME 425
Query: 426 RARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNIL 485
A++ ++ N ++YN L G C+ L ++A +LL E+ E E+ ++ L
Sbjct: 426 DAQRAFESLSE----KNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASL 480
Query: 486 IDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPR 545
+ G V +++ G++ + L+ ++ G A RVF+ M N
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-- 538
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIALARKPGEAL 605
++I+W ++ G+ + G G P+ TY + + + E
Sbjct: 539 ---NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG- 594
Query: 606 ILWNEVKERWEAGRDRENSDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 661
W +E + +KP + D+ RA A E + M
Sbjct: 595 --WRHFNSMYEDHK-----------IKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PNT +T L GY+K+G + V + E MR D PDH+++ TV++ ++ G + A
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMR---DEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
R + EM+ S + + +N+++ G+ K+ A E M + + ++ + ++
Sbjct: 281 RLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLS 335
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFD--EMVNDPR 545
+V + L E G+A ++L+ ++ + + A +VF+ E ND
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-- 393
Query: 546 VKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPDVGTYGSFANGIA 596
+ WN ++ GY G +G++ D T+ S + A
Sbjct: 394 -----VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 406 PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKAREL 465
P+ +++ V+S + ++ RQ+ M ++G+ N L+ Y K +I AR +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 466 LREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 525
+ + P+ V + L G + A+ F MR G P +++ T++ +
Sbjct: 218 FEWI-----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272
Query: 526 LSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLG 564
G+ K A +F EM + P D++AWN+++ G+ + G
Sbjct: 273 RLGKLKDARLLFGEM-SSP----DVVAWNVMISGHGKRG 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 28/245 (11%)
Query: 324 SNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKS 383
S EY+G LL MN ++ PK ++T +M G+ ++
Sbjct: 662 SEGEYLG-------ISLLGMYMNSRGMTEACALFSELSSPKSIV----LWTGMMSGHSQN 710
Query: 384 GRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANR 443
G + ++ + MR PD ++ TV+ + R + + + + +
Sbjct: 711 GFYEEALKFYKEMRHD---GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 444 ITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFN 503
+T N L+ Y K + + ++ EM + +VVS+N LI+G + AL F+
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRR----RSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 504 EMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVK---------VDLIA-W 553
MR I P +I++ ++ A + +G+ ++F+ M+ ++ VDL+ W
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 554 NMLVE 558
L E
Sbjct: 884 GYLQE 888
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 170/397 (42%), Gaps = 46/397 (11%)
Query: 166 PHVKAWSAVVSRLASSGDSVEALGLFRAVTRRLRKITDPDVAADSRPDTGAFNAVLNACA 225
P + W+A++ + + +AL ++ + +L +++ PD+ F +L AC+
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNM--QLARVS---------PDSFTFPHLLKACS 130
Query: 226 NSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLC--CRKDRKDLLVFVLERILEQNVPL- 282
+M + ++ + G D N ++ L CR+ VF + +PL
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-------EGLPLP 183
Query: 283 --CMTTLHSLVAAYVDFGD-LDTAEIIVQAMR-EKRRDLCRILRESNS-----EYIGGK- 332
+ + ++V+AY G+ ++ EI Q + + + D ++ N+ + G+
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 333 -NDSVFQ---KLLPN---SMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGR 385
+ SV + ++ P+ S+N L K +PN ++ ++ GY K+G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 386 VSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRIT 445
+ + M M +D PD +S T+ +SA + G +++AR + + R +
Sbjct: 304 AREAIDMFHEMINKD---VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 446 YNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEM 505
+ L+ + K ++ AR + D + DVV ++ +I G L + A+S + M
Sbjct: 361 SSALIDMFAKCGSVEGAR-----LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 506 RARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVN 542
G+ P +++ L+ A SG + F+ M +
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD 452
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 149/398 (37%), Gaps = 64/398 (16%)
Query: 217 FNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERIL 276
+N +L+ + F Q+FDEM + + +Y +++ + D V V ER
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 277 EQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMREKRRDLCRILRESNSEYIGGKNDSV 336
E + + H L+ + ++ AE + + R
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRR------------------------- 240
Query: 337 FQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGYMKSGRVSDTVRMLEAM 396
+ + + + ++ G+ G V + R + +
Sbjct: 241 ---------------------------REFGCDIKAMNMILNGWCVLGNVHEAKRFWKDI 273
Query: 397 RRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQ 456
S PD VSY T+++AL K G + +A ++ M + + N ++ C +
Sbjct: 274 IA---SKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 457 LQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARG--IAPTK 514
+I +A E+ RE++E P+VV+YN L+ + + EM +G +P
Sbjct: 331 KRIPEALEVFREISEKGP-DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Query: 515 ISYTTLMKAFALSGQPKLAHRVFDEMV-NDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXX 573
++++ L+K S + K V + M N + DL +N++ Y +
Sbjct: 390 VTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDL--YNLMFRLYVQWDKEEKVREIW 444
Query: 574 XXXXXNGFHPDVGTYGSFANGIALARKPGEALILWNEV 611
+G PD TY +G+ K GEAL + E+
Sbjct: 445 SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 368 PNTRIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRA 427
PN Y +L+K K R ++E M + S S P+ V+++ ++ ++ +D
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS-PNDVTFSYLLKYSQRSKDVD-- 406
Query: 428 RQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILID 487
VL M + YN++ + Y + + +K RE+ EM E + + PD +Y I I
Sbjct: 407 -IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM-ERSGLGPDQRTYTIRIH 464
Query: 488 GCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMV 541
G ALS+F EM ++G+ P + L Q K RV D+M+
Sbjct: 465 GLHTKGKIGEALSYFQEMMSKGMVPEP-------RTEMLLNQNKTKPRVEDKML 511
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 2/227 (0%)
Query: 405 HPDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVSANRITYNILLKGYCKQLQIDKARE 464
PD +Y ++ L ++G + ++AEM R + ++ +++ G+ K+ + D+ R+
Sbjct: 179 EPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRK 238
Query: 465 LLREMAEDAEIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 524
++R M E + V +YNI+I SA A + + + + + P ++Y+ L+ F
Sbjct: 239 VMRMMDEFG-VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 525 ALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEGYCRLGXXXXXXXXXXXXXXNGFHPD 584
A +F+ MV + K D + L+ C+ G + P
Sbjct: 298 CSEENLDEAMNLFEVMVCNG-YKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 585 VGTYGSFANGIALARKPGEALILWNEVKERWEAGRDRENSDSSVPPL 631
NG+A K EA L VKE++ D N + PL
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALPL 403
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 373 YTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLA 432
+ +++ G+++ G + + + M +D ASH V+ V+SA K ++ RQV +
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASH---VTMVGVLSACAKIRNLEFGRQVCS 256
Query: 433 EMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILV 492
+ V+ N N +L Y K I+ A+ L M E D V++ ++DG +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-----DNVTWTTMLDGYAIS 311
Query: 493 DDSAGALSFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLI 551
+D A N M + I +++ L+ A+ +G+P A VF E+ +K++ I
Sbjct: 312 EDYEAAREVLNSMPQKDI----VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 152/365 (41%), Gaps = 30/365 (8%)
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
NA+++ G + +LFD M + DA+S+N ++ +++ +L+R+
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE---KRRDLCRILRESNSEYIGG-KN 333
V + T +++ ++ G+ A V MR + + I +IG K
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 334 DSVFQKLLP-------------NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
VF L+ NS+ + + + + + +++ G+
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE-MTRIGV 439
+ R +T +L+ M S HP+H++ +++ + G + ++ + R
Sbjct: 399 AYNERSEETSFLLKEMLL---SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
I +N L+ Y K +I A+ + M + D V+Y LIDG + AL
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-----KRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
++F +M GI P ++ ++ A + S + H +F +M + +++ L ++ +V+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 560 YCRLG 564
YCR G
Sbjct: 571 YCRAG 575
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 152/365 (41%), Gaps = 30/365 (8%)
Query: 218 NAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVMKLCCRKDRKDLLVFVLERILE 277
NA+++ G + +LFD M + DA+S+N ++ +++ +L+R+
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 278 QNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAMRE---KRRDLCRILRESNSEYIGG-KN 333
V + T +++ ++ G+ A V MR + + I +IG K
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 334 DSVFQKLLP-------------NSMNQSXXXXXXXVYQPPLLPKPYTPNTRIYTTLMKGY 380
VF L+ NS+ + + + + + +++ G+
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 381 MKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQVLAE-MTRIGV 439
+ R +T +L+ M S HP+H++ +++ + G + ++ + R
Sbjct: 399 AYNERSEETSFLLKEMLL---SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 440 SANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCILVDDSAGAL 499
I +N L+ Y K +I A+ + M + D V+Y LIDG + AL
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-----KRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 500 SFFNEMRARGIAPTKISYTTLMKAFALSGQPKLAHRVFDEMVNDPRVKVDLIAWNMLVEG 559
++F +M GI P ++ ++ A + S + H +F +M + +++ L ++ +V+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 560 YCRLG 564
YCR G
Sbjct: 571 YCRAG 575
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 145/375 (38%), Gaps = 78/375 (20%)
Query: 199 RKITDPDVAADSRP--DTGAFNAVLNACANSGDGKMFLQLFDEMPQFGVVPDALSYNIVM 256
R+++D + S P +T ++NA+++ SG LF EM G+ P+ + V+
Sbjct: 73 RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVL 132
Query: 257 KLCCRKDRKDLLVFVL--ERI----LEQNVPLCMTTLHSLVAAYVDFGDLDTAEIIVQAM 310
++C LV +L E+I ++ L + ++ L+A Y + AE + + M
Sbjct: 133 RMCTS------LVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 311 REKRRDLCRILRESNSEYIGGKNDSVFQKLLPNSMNQSXXXXXXXVYQPPLLPKPYTPNT 370
G KN+
Sbjct: 187 E------------------GEKNNVT---------------------------------- 194
Query: 371 RIYTTLMKGYMKSGRVSDTVRMLEAMRRQDDSASHPDHVSYTTVVSALVKAGFMDRARQV 430
+T+++ GY ++G + +RR+ + + ++ +V++A QV
Sbjct: 195 --WTSMLTGYSQNGFAFKAIECFRDLRRE---GNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 431 LAEMTRIGVSANRITYNILLKGYCKQLQIDKARELLREMAEDAEIQPDVVSYNILIDGCI 490
+ + G N + L+ Y K +++ AR LL M D DVVS+N +I GC+
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-----DVVSWNSMIVGCV 304
Query: 491 LVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFALS-GQPKLAHRVFDEMVNDPRVKVD 549
ALS F M R + + +++ FALS + K+A +V
Sbjct: 305 RQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 550 LIAWNMLVEGYCRLG 564
L+ N LV+ Y + G
Sbjct: 365 LVN-NALVDMYAKRG 378