Miyakogusa Predicted Gene
- Lj5g3v0615690.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0615690.2 Non Chatacterized Hit- tr|I1L8Q4|I1L8Q4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,73.72,0,no
description,NULL; TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED,NULL;
RESPONSE REGULATOR OF TWO-C,CUFF.54066.2
(761 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7... 397 e-110
AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 257 2e-68
AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3... 257 2e-68
AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 224 1e-58
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 179 5e-45
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5... 176 6e-44
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co... 107 3e-23
AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5... 98 3e-20
AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5... 97 3e-20
AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 | chr4:9... 94 3e-19
AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 | chr... 94 5e-19
AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 | chr... 90 6e-18
AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 | chr... 89 1e-17
AT1G67710.1 | Symbols: ARR11 | response regulator 11 | chr1:2537... 85 2e-16
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 77 4e-14
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regula... 76 1e-13
AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 | chr... 75 2e-13
AT1G59940.1 | Symbols: ARR3 | response regulator 3 | chr1:220658... 70 7e-12
AT1G19050.1 | Symbols: ARR7 | response regulator 7 | chr1:657791... 69 9e-12
AT5G62920.1 | Symbols: ARR6 | response regulator 6 | chr5:252527... 67 5e-11
AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 | chr... 66 7e-11
AT1G49190.2 | Symbols: RR19 | response regulator 19 | chr1:18191... 66 7e-11
AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | chr... 66 1e-10
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulat... 65 2e-10
AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3... 65 2e-10
AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |... 63 9e-10
AT1G74890.1 | Symbols: ARR15 | response regulator 15 | chr1:2813... 63 1e-09
AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 | chr... 61 3e-09
AT2G46670.1 | Symbols: | CCT motif family protein | chr2:191645... 58 2e-08
AT2G40670.2 | Symbols: RR16 | response regulator 16 | chr2:16970... 58 3e-08
AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 2... 56 7e-08
AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6... 54 6e-07
AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4... 52 2e-06
AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8... 52 2e-06
>AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7 |
chr5:638283-641461 REVERSE LENGTH=727
Length = 727
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 256/568 (45%), Positives = 321/568 (56%), Gaps = 88/568 (15%)
Query: 36 EGRGLCEGDEVKCNGVAEEVKVGQGGNVESSSVQQPMPQLQPQGVCWERFLHIRSLKVLL 95
E R +E K NG+ +V+ G G +Q P+ Q VCWERFLH+R+++VLL
Sbjct: 28 ESRTEKHSEEEKTNGITMDVRNGSSG-----GLQIPLSQQTAATVCWERFLHVRTIRVLL 82
Query: 96 VEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIGLL 155
VE DDCTR+IVTALLRNCSYEV+EA+NG+QAWK+LEDL NHID++LTEV MP LSGIGLL
Sbjct: 83 VENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLL 142
Query: 156 YKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHX 215
KI++HK+R+NIP+IMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK LWQHVWRRC
Sbjct: 143 CKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQS 202
Query: 216 XXXXXXXXXT-QTQKSIKSKSLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274
T QTQKS+KSKS++K
Sbjct: 203 SSGSGSESGTHQTQKSVKSKSIKK------SDQDSGSSDENENGSIGLNASDGSSDGSGA 256
Query: 275 QSSWTKRAVEV-DSPKPVSEWDKITEGPDSTCAQVVHSNAEICEDKMV-PMATKEYPEQE 332
QSSWTK+AV+V DSP+ VS WD++ DSTCAQVVHSN E +++V P A KE E +
Sbjct: 257 QSSWTKKAVDVDDSPRAVSLWDRV----DSTCAQVVHSNPEFPSNQLVAPPAEKETQEHD 312
Query: 333 EQH----------------------------VKTAG-SKHSNALDVAPPKFNEQIYRGQL 363
++ KT G + N+ + + K+ ++ +G L
Sbjct: 313 DKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPL 372
Query: 364 DLNCENQSSKLRCKGLSLSDAITSTSDSQMH---GAKFEAL------NRRP-------KS 407
DL+ E+ SSK QMH G+ F+A+ NR P K+
Sbjct: 373 DLSSESPSSK------------------QMHEDGGSSFKAMSSHLQDNREPEAPNTHLKT 414
Query: 408 SDIENKGTNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSDQSAFSRYNAASNTKK 467
D EE +E S KR RG D G ++D+R VLRRS+ SAFSRYN ASN K
Sbjct: 415 LDTNEASVKISEELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANK 474
Query: 468 SPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGN---PPNQNSNVASNNIDMGSTT-NNA 523
G +GS S +N+ + K + HS+ N P N S+V SNN DM STT NNA
Sbjct: 475 ISGGNLGSTSLQDNNSQDLIKKTEAAYDCHSNMNESLPHNHRSHVGSNNFDMSSTTENNA 534
Query: 524 FTKSAVKSEPGVASETKCLYQTSAFQPL 551
FTK P V+S + S+FQPL
Sbjct: 535 FTKPGA---PKVSSAGSSSVKHSSFQPL 559
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 696 VDQNKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSS 751
D+NK SQR+AALT CF KKVRYQSRK+LAEQRPR RGQFVR+++
Sbjct: 661 ADENKISQREAALTKFRQKRKER---CFRKKVRYQSRKKLAEQRPRVRGQFVRKTA 713
>AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 229/430 (53%), Gaps = 51/430 (11%)
Query: 80 VCWERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDL 139
V WER+L +RSLKVLLVE DD TR IVTALL+NCSYEV + L+AW+ILED + IDL
Sbjct: 53 VKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDL 112
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
+LTEV MP SG GLL KIMSHKT KNIP+IMMSSHDSM LVFKCLS GAVDFLVKPIRK
Sbjct: 113 VLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRK 172
Query: 200 NELKNLWQHVWRRCHXXXXXXXXXXTQTQKSIKSKSLEKXXXXXXXXXXXXXXXXXXXXX 259
NELKNLWQHVWRRCH +KS+K +S +
Sbjct: 173 NELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQ--GSENDASISDEHRNESGSSG 230
Query: 260 XXXXXXXXXXXXXXXQSSWTKRAVEVDSPKPVSEWDKITEGPDSTCAQVVHSNAEICEDK 319
QSSWTKRA + S P +++ PD+ + + N ++
Sbjct: 231 GLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQF------PDAPNKKGTYENGCAHVNR 284
Query: 320 MVPMATKEYPEQEEQHVKTAGSKHSNALDVAPPKFNEQIYRGQLDLNCENQSSKLRCKGL 379
+ KE +Q+EQ + + S + P G L+ N +K + L
Sbjct: 285 L-----KEAEDQKEQIGTGSQTGMSMSKKAEEP--------GDLEKN-----AKYSVQAL 326
Query: 380 SLSDAITSTSDSQMHGAKFEALNRRPKSSDIENKG-TNDDEEFPSLELSLKRLRGVNDAG 438
++ T LNR +S +E+K +++ E+ SLE +LK+ R D
Sbjct: 327 ERNNDDT--------------LNRSSGNSQVESKAPSSNREDLQSLEQTLKKTREDRDYK 372
Query: 439 ITIQDERIVLRRSDQSAFSRY-NAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSH 497
+ +R VLR S+ SAFS+Y N A++ KK+P V S SPH++ + SS
Sbjct: 373 VG---DRSVLRHSNLSAFSKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSS------ 423
Query: 498 SSGNPPNQNS 507
SS NP Q S
Sbjct: 424 SSDNPLKQQS 433
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 699 NKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSSNENASGA 758
++ +QR+AAL CF KKVRY SRK+LAEQRP +GQF+R+ +++ SG+
Sbjct: 437 DRWAQREAALMKFRLKRKER---CFEKKVRYHSRKKLAEQRPHVKGQFIRK-RDDHKSGS 492
Query: 759 TD 760
D
Sbjct: 493 ED 494
>AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 229/430 (53%), Gaps = 51/430 (11%)
Query: 80 VCWERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDL 139
V WER+L +RSLKVLLVE DD TR IVTALL+NCSYEV + L+AW+ILED + IDL
Sbjct: 53 VKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDL 112
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
+LTEV MP SG GLL KIMSHKT KNIP+IMMSSHDSM LVFKCLS GAVDFLVKPIRK
Sbjct: 113 VLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRK 172
Query: 200 NELKNLWQHVWRRCHXXXXXXXXXXTQTQKSIKSKSLEKXXXXXXXXXXXXXXXXXXXXX 259
NELKNLWQHVWRRCH +KS+K +S +
Sbjct: 173 NELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQ--GSENDASISDEHRNESGSSG 230
Query: 260 XXXXXXXXXXXXXXXQSSWTKRAVEVDSPKPVSEWDKITEGPDSTCAQVVHSNAEICEDK 319
QSSWTKRA + S P +++ PD+ + + N ++
Sbjct: 231 GLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQF------PDAPNKKGTYENGCAHVNR 284
Query: 320 MVPMATKEYPEQEEQHVKTAGSKHSNALDVAPPKFNEQIYRGQLDLNCENQSSKLRCKGL 379
+ KE +Q+EQ + + S + P G L+ N +K + L
Sbjct: 285 L-----KEAEDQKEQIGTGSQTGMSMSKKAEEP--------GDLEKN-----AKYSVQAL 326
Query: 380 SLSDAITSTSDSQMHGAKFEALNRRPKSSDIENKG-TNDDEEFPSLELSLKRLRGVNDAG 438
++ T LNR +S +E+K +++ E+ SLE +LK+ R D
Sbjct: 327 ERNNDDT--------------LNRSSGNSQVESKAPSSNREDLQSLEQTLKKTREDRDYK 372
Query: 439 ITIQDERIVLRRSDQSAFSRY-NAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSH 497
+ +R VLR S+ SAFS+Y N A++ KK+P V S SPH++ + SS
Sbjct: 373 VG---DRSVLRHSNLSAFSKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSS------ 423
Query: 498 SSGNPPNQNS 507
SS NP Q S
Sbjct: 424 SSDNPLKQQS 433
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 699 NKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSSNENASGA 758
++ +QR+AAL CF KKVRY SRK+LAEQRP +GQF+R+ +++ SG+
Sbjct: 437 DRWAQREAALMKFRLKRKER---CFEKKVRYHSRKKLAEQRPHVKGQFIRK-RDDHKSGS 492
Query: 759 TD 760
D
Sbjct: 493 ED 494
>AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=522
Length = 522
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 114/135 (84%)
Query: 80 VCWERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDL 139
V WER+L +RSLKVLLVE DD TR IVTALL+NCSYEV + L+AW+ILED + IDL
Sbjct: 53 VKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDL 112
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
+LTEV MP SG GLL KIMSHKT KNIP+IMMSSHDSM LVFKCLS GAVDFLVKPIRK
Sbjct: 113 VLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRK 172
Query: 200 NELKNLWQHVWRRCH 214
NELKNLWQHVWRRCH
Sbjct: 173 NELKNLWQHVWRRCH 187
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 699 NKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSSNENASGA 758
++ +QR+AAL CF KKVRY SRK+LAEQRP +GQF+R+ +++ SG+
Sbjct: 464 DRWAQREAALMKFRLKRKER---CFEKKVRYHSRKKLAEQRPHVKGQFIRK-RDDHKSGS 519
Query: 759 TD 760
D
Sbjct: 520 ED 521
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 49/235 (20%)
Query: 275 QSSWTKRAVEVDSPKPVSEWDKITEGPDSTCAQVVHSNAEICEDKMVPMATKEYPEQEEQ 334
QSSWTKRA + S P +++ PD+ + + N +++ KE +Q+EQ
Sbjct: 273 QSSWTKRASDTKSTSPSNQF------PDAPNKKGTYENGCAHVNRL-----KEAEDQKEQ 321
Query: 335 HVKTAGSKHSNALDVAPPKFNEQIYRGQLDLNCENQSSKLRCKGLSLSDAITSTSDSQMH 394
+ + S + P G L+ N +K + L ++ T
Sbjct: 322 IGTGSQTGMSMSKKAEEP--------GDLEKN-----AKYSVQALERNNDDT-------- 360
Query: 395 GAKFEALNRRPKSSDIENKG-TNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSDQ 453
LNR +S +E+K +++ E+ SLE +LK+ R D + +R VLR S+
Sbjct: 361 ------LNRSSGNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVG---DRSVLRHSNL 411
Query: 454 SAFSRY-NAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGNPPNQNS 507
SAFS+Y N A++ KK+P V S SPH++ + SS SS NP Q S
Sbjct: 412 SAFSKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSS------SSDNPLKQQS 460
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19232874-19234901 FORWARD LENGTH=468
Length = 468
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 104/133 (78%)
Query: 80 VCWERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDL 139
V WE++L L+VLLVE D TR I+TALLR C Y+V+ ++GL AW++L++ +++IDL
Sbjct: 26 VQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDL 85
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
ILTE+ +P +SG LL +M H+ KNIP+IMMSS DS+ +V KC+ +GA D+L+KP+RK
Sbjct: 86 ILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRK 145
Query: 200 NELKNLWQHVWRR 212
NELKNLWQHVWRR
Sbjct: 146 NELKNLWQHVWRR 158
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 702 SQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSSNENAS 756
SQR+AAL CF KKVRYQSRK+LAEQRPR +GQFVR + N +AS
Sbjct: 415 SQREAALMKFRLKRKDR---CFDKKVRYQSRKKLAEQRPRVKGQFVR-TVNSDAS 465
>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
chr5:8356204-8358873 REVERSE LENGTH=667
Length = 667
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 99/133 (74%)
Query: 80 VCWERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDL 139
V WERFL +L+VLLVE DD TR I+ ALLR CSY V +GL+AW++L+ +DL
Sbjct: 148 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 207
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
ILTEV +P +SG LL IM H KNIP+IMMS+ DS+ V+KC+ KGA D+LVKP+R+
Sbjct: 208 ILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRR 267
Query: 200 NELKNLWQHVWRR 212
NEL+NLWQHVWRR
Sbjct: 268 NELRNLWQHVWRR 280
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 703 QRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSSNENA 755
QR+AALT C+ KKVRY+SRK+LAEQRPR +GQFVRQ + A
Sbjct: 617 QREAALTKFRMKRKDR---CYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQA 666
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
-containing response regulator protein |
chr5:24675540-24678176 FORWARD LENGTH=618
Length = 618
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%)
Query: 85 FLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEV 144
F+ +++LL + D + V LL CSY+V + Q L ID+IL E+
Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEI 72
Query: 145 AMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 204
+P G+ +L I K + IP+IMMS D + +V KCL GA D+LVKP+R NEL N
Sbjct: 73 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 132
Query: 205 LWQHVWRR 212
LW H+WRR
Sbjct: 133 LWTHMWRR 140
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 696 VDQNKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVRQSS--NE 753
V NK +R+ AL CF KK+RY +RKRLAE+RPR +GQFVR+ + N
Sbjct: 525 VRVNKLDRREEALLKFRRKRNQR---CFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNV 581
Query: 754 NASGATDS 761
+ +G DS
Sbjct: 582 DLNGQPDS 589
>AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 |
chr3:5756113-5759139 FORWARD LENGTH=690
Length = 690
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
L+VL+V+ D I+ +LR C YEV + A +L + D+++++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G LL + ++P+IMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 211 RR 212
R+
Sbjct: 154 RK 155
>AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 |
chr3:5756113-5758853 FORWARD LENGTH=669
Length = 669
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
L+VL+V+ D I+ +LR C YEV + A +L + D+++++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G LL + ++P+IMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 211 RR 212
R+
Sbjct: 154 RK 155
>AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 |
chr4:9112979-9115785 FORWARD LENGTH=664
Length = 664
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 90 SLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGL 149
+L+VL+V+ D I+ +L C Y V + A +L N D+++++V MP +
Sbjct: 27 NLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDM 86
Query: 150 SGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 209
G LL + ++P+IMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 87 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 210 WRR 212
R+
Sbjct: 144 VRK 146
>AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 |
chr2:10724490-10726961 REVERSE LENGTH=596
Length = 596
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
++VL V+ D I+ +LLR+C Y V +A ++L + N DL++++V MP +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G LL + ++P+IM+S+H V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 211 R 211
R
Sbjct: 134 R 134
>AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 |
chr2:333041-334514 FORWARD LENGTH=382
Length = 382
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
L++L+V+ D FI+ +L Y+V + A IL + + DL+L++V MPG++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G LL ++ ++P+IMMS V ++ GA D+L+KPIR ELKN+WQHV
Sbjct: 71 GYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVV 128
Query: 211 RR 212
RR
Sbjct: 129 RR 130
>AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 |
chr4:15444290-15446766 REVERSE LENGTH=552
Length = 552
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
++VL V+ D I+ LL+ C Y V A ++L + N DL++++V MP +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G LL + ++P+IM+S+H V K + GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 211 R 211
R
Sbjct: 134 R 134
>AT1G67710.1 | Symbols: ARR11 | response regulator 11 |
chr1:25376994-25378905 REVERSE LENGTH=521
Length = 521
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
L+VL+V+ D I+ +L+ CSYEV +A ++L + + D+++++V MP +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 151 GIGLLYKIMSH-KTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 209
G +K++ H ++P+IMMS V K + GA D+L+KPIR ELK +WQHV
Sbjct: 71 G----FKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 210 WRR 212
R+
Sbjct: 127 LRK 129
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19233422-19234901 FORWARD LENGTH=351
Length = 351
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 172 MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 212
MSS DS+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWRR
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 702 SQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVR 748
SQR+AAL CF KKVRYQSRK+LAEQRPR +GQFVR
Sbjct: 298 SQREAALMKFRLKRKDR---CFDKKVRYQSRKKLAEQRPRVKGQFVR 341
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regulator
4 | chr1:3442624-3443759 REVERSE LENGTH=259
Length = 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 46 VKCNGVAEEVKVGQGGNVESSSVQQPMPQLQPQGVCWERFLHIRSLKVLLVEYDDCTRFI 105
V C +E + VG G +ES+ L + + VL V+ R +
Sbjct: 7 VSCLRRSEMMSVGGIGGIESAP------------------LDLDEVHVLAVDDSLVDRIV 48
Query: 106 VTALLRNCSYEVIEAANGLQAWKILEDLTNH----------IDLILTEVAMPGLSGIGLL 155
+ LLR S +V +G +A + L L N +DLI+T+ MPG++G LL
Sbjct: 49 IERLLRITSCKVTAVDSGWRALEFL-GLDNEKASAEFDRLKVDLIITDYCMPGMTGYELL 107
Query: 156 YKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 211
KI + +P+++MSS + + + +CL +GA DFL+KP++ ++K L H+ +
Sbjct: 108 KKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTK 163
>AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 |
chr5:23501785-23504099 REVERSE LENGTH=618
Length = 618
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
++VL V+ + + LL C Y V + +A ++L + +N DL++++V MP
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
G +K++ ++P+IM+S+H V K + GA D+LVKP+ EL+N+W HV
Sbjct: 61 G----FKLLEIGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 116
Query: 211 RR 212
++
Sbjct: 117 KK 118
>AT1G59940.1 | Symbols: ARR3 | response regulator 3 |
chr1:22065894-22066895 REVERSE LENGTH=231
Length = 231
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDL------------TNHID 138
+ VL V+ R ++ LLR S +V +G W+ LE L +D
Sbjct: 33 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSG---WRALEFLGLDDDKAAVEFDRLKVD 89
Query: 139 LILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIR 198
LI+T+ MPG++G LL KI + K +P+++MSS + M + +CL +GA DFL+KP++
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVK 149
Query: 199 KNELKNLWQHVWR 211
++K L ++ R
Sbjct: 150 LADVKRLRSYLTR 162
>AT1G19050.1 | Symbols: ARR7 | response regulator 7 |
chr1:6577919-6579078 REVERSE LENGTH=206
Length = 206
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKIL-----------EDLTNHIDL 139
L VL V+ R ++ LLR S +V +G +A + L +DL ++L
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDL--KVNL 81
Query: 140 ILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 199
I+T+ +MPGLSG LL KI + +P+++MSS + + + +CL +GA +FL+KP++
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 200 NELKNLWQHVWR 211
++K + Q + R
Sbjct: 142 ADVKRIKQLIMR 153
>AT5G62920.1 | Symbols: ARR6 | response regulator 6 |
chr5:25252745-25254158 REVERSE LENGTH=186
Length = 186
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 83 ERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILT 142
ER L + S KV +V D TR L+ +V E + G EDL ++LI+T
Sbjct: 41 ERLLRVSSCKVTVV--DSATR-----ALQYLGLDVEEKSVGF------EDLK--VNLIMT 85
Query: 143 EVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 202
+ +MPG++G LL KI + +P+++MSS + + + +CL +GA DFL+KP++ +++
Sbjct: 86 DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDV 145
Query: 203 KNL 205
K L
Sbjct: 146 KRL 148
>AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 |
chr1:18191342-18193598 FORWARD LENGTH=608
Length = 608
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 93 VLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGI 152
VL+V+ + T + +++ +Y+V + +A L + I++++ + MPG+ G+
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 153 GLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 212
L I S + ++P+++MS + V K GA D++VKP+++ + N+WQH+ R+
Sbjct: 96 QALKSITS---KLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
>AT1G49190.2 | Symbols: RR19 | response regulator 19 |
chr1:18191342-18193598 FORWARD LENGTH=622
Length = 622
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 93 VLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGI 152
VL+V+ + T + +++ +Y+V + +A L + I++++ + MPG+ G+
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 153 GLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 212
L I S + ++P+++MS + V K GA D++VKP+++ + N+WQH+ R+
Sbjct: 96 QALKSITS---KLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
>AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 |
chr3:20905480-20906368 FORWARD LENGTH=153
Length = 153
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKIL--------EDLTN--HIDLI 140
L VL V+ + R +V +L+ S +V A NGL+A + L + LTN ++LI
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 141 LTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 200
+T+ MPG++G LL K+ K +P++++SS + + KCL+ GA F+ KP++ +
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139
Query: 201 ELKNLWQHVW 210
+++ L H+
Sbjct: 140 DVEKLKCHLL 149
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator
5 | chr3:17759112-17760740 REVERSE LENGTH=184
Length = 184
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 14/123 (11%)
Query: 83 ERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILT 142
ER L + S KV +V D TR + Y ++ N EDL I+LI+T
Sbjct: 41 ERLLRVSSCKVTVV--DSATRAL--------QYLGLDGENNSSVG--FEDLK--INLIMT 86
Query: 143 EVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 202
+ +MPG++G LL KI + IP+++MSS + + + +CL +GA DFL+KP++ ++
Sbjct: 87 DYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADV 146
Query: 203 KNL 205
K L
Sbjct: 147 KRL 149
>AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 |
chr3:21110059-21111228 FORWARD LENGTH=234
Length = 234
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 136 HIDLILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVK 195
++LI+T+ MPG++G LL K+ ++IP+++MSS + + +CL +GA +F +K
Sbjct: 73 EVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLK 132
Query: 196 PIRKNELKNLWQHVWR 211
P+R +L L H+ +
Sbjct: 133 PVRLADLNKLKPHMMK 148
>AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |
chr2:17222280-17223536 FORWARD LENGTH=225
Length = 225
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 136 HIDLILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVK 195
I+LI+T+ MPG++G LL K+ ++IP+++MSS + + +CL +GA +F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 196 PIRKNELKNLWQHVWR 211
P++ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>AT1G74890.1 | Symbols: ARR15 | response regulator 15 |
chr1:28131590-28132710 REVERSE LENGTH=206
Length = 206
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 15/129 (11%)
Query: 83 ERFLHIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILT 142
ER L I + KV VE + R Y ++ NG K L+ ++LI+T
Sbjct: 34 ERLLKISACKVTTVE----------SGTRALQYLGLDGDNGSSGLKDLK-----VNLIVT 78
Query: 143 EVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 202
+ +MPGL+G LL KI + IP+++MSS + + +C+ +GA +FL+KP++ ++
Sbjct: 79 DYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADV 138
Query: 203 KNLWQHVWR 211
K L + + R
Sbjct: 139 KRLKELIMR 147
>AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 |
chr2:16970258-16971120 FORWARD LENGTH=164
Length = 164
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 87 HIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILE--DLTNHID------ 138
H L VL V+ + R +V LL+ +V A N L+A + L D HID
Sbjct: 25 HDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNV 84
Query: 139 ----LILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLV 194
LI+T+ MPG++G LL K+ + +P+++MSS + + KCL+ GA F+
Sbjct: 85 MKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQ 144
Query: 195 KPIRKNELKNLWQHVW 210
KP++ +++ L H+
Sbjct: 145 KPLKLADVEKLKCHLM 160
>AT2G46670.1 | Symbols: | CCT motif family protein |
chr2:19164589-19165233 REVERSE LENGTH=183
Length = 183
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 702 SQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEQRPRFRGQFVR 748
SQR+AAL CF KKVRYQSRK+LAEQRPR +GQFVR
Sbjct: 130 SQREAAL---MKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>AT2G40670.2 | Symbols: RR16 | response regulator 16 |
chr2:16970258-16971120 FORWARD LENGTH=165
Length = 165
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 87 HIRSLKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILE--DLTNHID------ 138
H L VL V+ + R +V LL+ +V A N L+A + L D HID
Sbjct: 25 HDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNV 84
Query: 139 ----LILTEVAMPGLSGIGLLYKIMSHKTR-KNIPIIMMSSHDSMGLVFKCLSKGAVDFL 193
LI+T+ MPG++G LL K+ + + +P+++MSS + + KCL+ GA F+
Sbjct: 85 MKVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFM 144
Query: 194 VKPIRKNELKNLWQHVW 210
KP++ +++ L H+
Sbjct: 145 QKPLKLADVEKLKCHLM 161
>AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 20 |
chr3:23176556-23177922 REVERSE LENGTH=352
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 137 IDLILTEVAMPGLSGIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKP 196
IDL++ + MP ++G+ L I + ++P+++MS V + + GA DFLVKP
Sbjct: 11 IDLVIWDFHMPDINGLDALNII---GKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKP 67
Query: 197 IRKNELKNLWQHVWRR 212
+ K + LW+HV+R+
Sbjct: 68 VSKEVIAVLWRHVYRK 83
>AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6 |
chr1:25565983-25569302 FORWARD LENGTH=755
Length = 755
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
+ +LL+++D + +T++L+ S V+ +A ++E I LI+ + MP +
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 151 GIGLLYKIMSHKTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 210
L ++ K+IP+I+++ L+K A L KPI +++KN+WQHV+
Sbjct: 73 SHSFLNALL----LKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVF 128
Query: 211 RR 212
+
Sbjct: 129 SK 130
>AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4 |
chr5:19962934-19964351 FORWARD LENGTH=292
Length = 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 91 LKVLLVEYDDCTRFIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLS 150
L+VL+ + D I+ L+ Y+V +A L + N DL + +V +
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVN----N 97
Query: 151 GIGLLYKIMSH-KTRKNIPIIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 209
G +++ +S + ++PII++S DS+ V K + GA D+L+KPIR +L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 210 WRR 212
++
Sbjct: 158 VKK 160
>AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8 |
chr4:327236-328955 REVERSE LENGTH=336
Length = 336
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 109 LLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIGLLYKIMSHKTRKNIP 168
++R C Y+V+ I+ + IDL+L E + ++ LL KI ++ IP
Sbjct: 1 MIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKYELLEKI---RSICEIP 57
Query: 169 IIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 212
+++ +H +V +CL +GA L KP+ +N+ K LWQ R
Sbjct: 58 VVVSGAHVKDAIV-ECLCRGAKLCLEKPLMENDFKILWQFTVSR 100