Miyakogusa Predicted Gene
- Lj5g3v0615470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0615470.1 CUFF.53448.1
(558 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 642 0.0
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 366 e-101
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 360 1e-99
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 360 2e-99
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 358 8e-99
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 349 4e-96
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 348 4e-96
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 8e-96
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 9e-95
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 5e-93
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 338 5e-93
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 2e-90
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 7e-89
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 320 1e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 319 3e-87
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 318 5e-87
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 1e-86
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 316 4e-86
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 7e-86
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 8e-84
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 9e-84
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 306 2e-83
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 306 3e-83
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 306 3e-83
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 9e-83
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 8e-82
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 301 1e-81
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 301 1e-81
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 299 3e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 299 4e-81
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 5e-81
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 298 7e-81
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 4e-80
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 9e-80
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 293 2e-79
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 293 2e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 3e-79
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 5e-78
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 9e-77
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 283 2e-76
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 3e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 278 6e-75
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 278 8e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 4e-74
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 276 4e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 273 2e-73
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 270 2e-72
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 5e-72
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 264 1e-70
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 256 3e-68
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 250 2e-66
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 244 2e-64
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 6e-63
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 8e-63
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 237 2e-62
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 9e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 5e-52
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 9e-51
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 194 1e-49
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 188 8e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 114 1e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 114 2e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 111 1e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 108 7e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 107 2e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 100 3e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 1e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 95 2e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 91 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 88 1e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 83 5e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 83 6e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 81 2e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 7e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 8e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 5e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 8e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 3e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 9e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 4e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 51 2e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/562 (57%), Positives = 406/562 (72%), Gaps = 9/562 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFAS-------SVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVK 52
+LIAY+ +Y LF S S DA PDS +++ VLKA++ F +
Sbjct: 94 LLIAYTSREMYFDAFSLFLSWIGSSCYSSDAA-RPDSISISCVLKALSGCDDFWLGSLAR 152
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ H FV+R G ++D+FV N ++T Y +C I ARKVFD M ERD VSWNSMI GYSQ G
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+E+CK++Y ML+ P+GVT++SV QACGQS DL+ G+EVH + E+ I++DL LC
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
NAVI YAKCGSLDYAR LF+EMSEKD V+YG+IISGYMA+G V +A +F ME+ GL
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
TWNA+ISG++QNN E I+ REM G +PN VTL+S +P +Y SNL+GGKE+HA+A
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
IR D NIYV T+IID YAKLGF+ GA++VFD + RSL+ WTAIITAYA HGD+ A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
L+ QM G +PD VTLTAVL+A AHSG D A IF++M +KY I+P VE YACMV V
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
LSRAGKLS+A +FIS+MPI+P AK WGALLNGASV GD+E +FACD LFE+EPE++GNY
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
IMANLY+ AGRWEEA VR +M+ IG+ KI G+SWIE L +FIAKD S ERS E+Y
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 533 TYLEGLFCMMREEGYILQEELD 554
+EGL M ++ YI ++ELD
Sbjct: 633 EIIEGLVESMSDKEYIRKQELD 654
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 199/449 (44%), Gaps = 83/449 (18%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
V + H ++ ++ D F+ + L++ Y R A VFD + R+ S+N+++ Y+
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 111 CGFYEECKRLYMEML-----SVGSVVPDGVTIVSVMQACGQSKDLVLG---MEVHGFVNE 162
Y + L++ + S + PD ++I V++A D LG +VHGFV
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 163 SGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDV 222
G + D+ + N +I Y KC +++ AR++F+EMSE+D VS+ S+ISGY G + +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 223 FRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
++ M + S KPN VT+ S S+L
Sbjct: 221 YKAM------------------------------LACSDFKPNGVTVISVFQACGQSSDL 250
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAY 342
G EVH I ++ + A+I YAK G + AR +FD+ + V + AII+ Y
Sbjct: 251 IFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGY 310
Query: 343 AAHGDASLALGLYA-------------------------------QMLDSGIQPDQVTLT 371
AHG A+ L++ +M+ G +P+ VTL+
Sbjct: 311 MAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLS 370
Query: 372 AVLTACAHS-----GLVDEAWKIFNTMHSK-YGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
++L + +S G A+ I N + Y +++ YA +G L A ++ + K
Sbjct: 371 SLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA-KLGFLLGAQRVFDNCK- 428
Query: 426 ISEMPIEPSAKAWGALLNGASVYGDVETG 454
+ S AW A++ +V+GD ++
Sbjct: 429 ------DRSLIAWTAIITAYAVHGDSDSA 451
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 328/582 (56%), Gaps = 36/582 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ Y G Y + + V GI P FT+T+VL ++A+ + K+ H F+++
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRC--METGKKVHSFIVK 174
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFD----------------------------- 91
GL ++ V N+L+ Y +CG+ +A+ VFD
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 92 --GMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKD 149
M ERD V+WNSMI G++Q G+ ++ +ML + PD T+ SV+ AC +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 150 LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV--SYGSII 207
L +G ++H + +G ++ + NA+I+MY++CG ++ AR L E+ KD + +++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
GY+ G + +A+++F +++ + W A+I G Q+ + AI+L R M G G +PN+
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
TLA+ + + S ++L GK++H A++ ++ V+ A+I YAK G I A + FD
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 328 R-SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
R R V WT++I A A HG A AL L+ ML G++PD +T V +AC H+GLV++
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 387 WKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGAS 446
+ F+ M I P + YACMV + RAG L EA +FI +MPIEP WG+LL+
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 447 VYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGS 506
V+ +++ GK A + L +EPE+SG Y +ANLYS G+WEEA+++RK M++ V K +G
Sbjct: 595 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 507 SWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
SWIE+ ++ F +D ++ +EIY ++ ++ +++ GY+
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 215/463 (46%), Gaps = 67/463 (14%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP-------------------- 94
HC V++ GL +++ N L+ Y + G ARK+FD MP
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 95 -----------ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
+RD+VSW +MI GY G Y + R+ +M+ G + P T+ +V+ +
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPTQFTLTNVLAS 155
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
++ + G +VH F+ + G+ ++ + N+++ MYAKCG A+ +F+ M +D S+
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM-QGSGL 262
++I+ +M G + A F M + TWN++ISG Q + A+D+ +M + S L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAI---------------------------RR 295
P+ TLAS + + L GK++H++ + RR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 296 CYDQ------NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
+Q I TA++D Y KLG ++ A+ +F + R +V WTA+I Y HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A+ L+ M+ G +P+ TL A+L+ + + +I + K G V +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA-VKSGEIYSVSVSNAL 454
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
+ + ++AG ++ A++ + E +W +++ + +G E
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 154/338 (45%), Gaps = 44/338 (13%)
Query: 156 VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGF 215
VH V +SG+ + L N ++ +Y+K G +AR+LF+EM + S+ +++S Y G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 216 VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
+ + F + +W +I G + AI ++ +M G++P TL + +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD---------- 325
+ + GK+VH++ ++ N+ V+ ++++ YAK G A+ VFD
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 326 ---------------------QARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGI 363
Q R +V W ++I+ + G AL ++++ML DS +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK-----YGIQPLVEQYACMVGVLSRAGK 418
PD+ TL +VL+ACA+ E I +HS + I +V ++ + SR G
Sbjct: 276 SPDRFTLASVLSACANL----EKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGG 329
Query: 419 LSEAAKFISEMPIEP-SAKAWGALLNGASVYGDVETGK 455
+ A + I + + + + ALL+G GD+ K
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 301/521 (57%), Gaps = 4/521 (0%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR 87
P+ +T ++KA A S + H ++ + +D+FV N+L+ CY CG++ A
Sbjct: 129 PNKYTFPFLIKAAAE--VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC 186
Query: 88 KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
KVF + E+D VSWNSMI G+ Q G ++ L+ +M S V VT+V V+ AC +
Sbjct: 187 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES-EDVKASHVTMVGVLSACAKI 245
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
++L G +V ++ E+ + V+L L NA++ MY KCGS++ A+ LF+ M EKD+V++ +++
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ-GSGLKPNA 266
GY AR+V M + WNALIS QN A+ + E+Q +K N
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 365
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+TL ST+ + L G+ +H+Y + N +V +A+I Y+K G + +R+VF+
Sbjct: 366 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
R + +W+A+I A HG + A+ ++ +M ++ ++P+ VT T V AC+H+GLVDEA
Sbjct: 426 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 485
Query: 387 WKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGAS 446
+F+ M S YGI P + YAC+V VL R+G L +A KFI MPI PS WGALL
Sbjct: 486 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 545
Query: 447 VYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGS 506
++ ++ + AC L E+EP + G +++++N+Y+ G+WE S +RK M G+ K G
Sbjct: 546 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 605
Query: 507 SWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
S IE+ G + F++ D ++ S+++Y L + ++ GY
Sbjct: 606 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 221/486 (45%), Gaps = 74/486 (15%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENAL--VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIG 106
+ +K+ H ++R G +D + + L + + ARKVFD +P+ ++ +WN++I
Sbjct: 44 RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103
Query: 107 GYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
Y+ +++M+S P+ T +++A + L LG +HG +S +
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 167 VDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
D+ + N++I Y CG LD A ++F + EKD VS+ S+I+G++ G KA ++F+ M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
E+ +K + VT+ + + NL G+
Sbjct: 224 ES-------------------------------EDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 287 EVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWT---------- 336
+V +Y + N+ +A A++D Y K G I A+++FD + V WT
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 337 ---------------------AIITAYAAHGDASLALGLYAQM-LDSGIQPDQVTLTAVL 374
A+I+AY +G + AL ++ ++ L ++ +Q+TL + L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
+ACA G + E + ++ K+GI+ + ++ + S+ G L ++ + + + +
Sbjct: 373 SACAQVGAL-ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRD 430
Query: 435 AKAWGALLNGASVYGDVETGKFACDHLFEI-EPESSGNYIIMANLY---SCAGRWEEASR 490
W A++ G +++G G A D +++ E N + N++ S G +EA
Sbjct: 431 VFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 491 VRKRME 496
+ +ME
Sbjct: 488 LFHQME 493
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/525 (37%), Positives = 295/525 (56%), Gaps = 3/525 (0%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR 87
PD FT + K A S + H LR LE V NA + + CG++ AR
Sbjct: 154 PDHFTYPVLFKVCADLRLSSLGHMILGHVLKLR--LELVSHVHNASIHMFASCGDMENAR 211
Query: 88 KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
KVFD P RD VSWN +I GY + G E+ +Y M S G V PD VT++ ++ +C
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG-VKPDDVTMIGLVSSCSML 270
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
DL G E + +V E+G+ + +PL NA++ M++KCG + AR +F+ + ++ VS+ ++I
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
SGY G + +R +F ME + WNA+I G VQ + A+ L +EMQ S KP+ +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T+ + S L G +H Y + N+ + T+++D YAK G I A VF
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
++R+ + +TAII A HGDAS A+ + +M+D+GI PD++T +L+AC H G++
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
F+ M S++ + P ++ Y+ MV +L RAG L EA + + MP+E A WGALL G +
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 448 YGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
+G+VE G+ A L E++P SG Y+++ +Y A WE+A R R+ M E GV KI G S
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Query: 508 WIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEE 552
IE++G + FI +D S S++IY L L MR +L E
Sbjct: 631 SIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVLFSE 675
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 216/522 (41%), Gaps = 115/522 (22%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGE---IGLARKVFDGMPERDTVSWNSMIGG 107
+K+ ++ GL D F + L+ +C E + + K+ G+ + SWN I G
Sbjct: 69 LKQIQAQMIINGLILDPFASSRLIA-FCALSESRYLDYSVKILKGIENPNIFSWNVTIRG 127
Query: 108 YSQCGFYEECKRLYMEMLSVGSV--VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
+S+ +E LY +ML G PD T + + C + LG + G V + +
Sbjct: 128 FSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRL 187
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
E+ + NA I M+A CG ++ AR++F+E +D VS+ +I+GY G KA V++
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
ME+ G+KP+ VT+ + S +L G
Sbjct: 248 MES-------------------------------EGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
KE + Y I + A++D ++K G IH AR++FD R++V WT +I+ YA
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 346 G---------------DASL----------------ALGLYAQMLDSGIQPDQVTLTAVL 374
G D L AL L+ +M S +PD++T+ L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 375 TACAHSGLVD-----------------------------------EAWKIFNTMHSKYGI 399
+AC+ G +D EA +F+ + ++ +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGKF 456
Y ++G L+ G S A + +EM I P + LL+ G ++TG+
Sbjct: 457 -----TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 511
Query: 457 ACDHL---FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
+ F + P+ +Y IM +L AG EEA R+ + M
Sbjct: 512 YFSQMKSRFNLNPQLK-HYSIMVDLLGRAGLLEEADRLMESM 552
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 308/547 (56%), Gaps = 46/547 (8%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG-LETDIFVENAL 73
L+ V G+ PD FT++SVL A + + KE H + L+ G L+ + FV +AL
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSH--LEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
V YC C ++ R+VFDGM +R WN+MI GYSQ +E L++ M ++ +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
T+ V+ AC +S +HGFV + G++ D + N ++ MY++ G +D A +F
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG 464
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
+M ++D L TWN +I+G V + E A+ L
Sbjct: 465 KMEDRD-------------------------------LVTWNTMITGYVFSEHHEDALLL 493
Query: 254 VREMQG-----------SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+ +MQ LKPN++TL + +P + S L GKE+HAYAI+ ++
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
V +A++D YAK G + +R+VFDQ ++++ W II AY HG+ A+ L M+ G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
++P++VT +V AC+HSG+VDE +IF M YG++P + YAC+V +L RAG++ EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 423 AKFISEMPIE-PSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSC 481
+ ++ MP + A AW +LL + ++ ++E G+ A +L ++EP + +Y+++AN+YS
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 482 AGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCM 541
AG W++A+ VR+ M+E GV K G SWIE + F+A D S+ +S+++ YLE L+
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 542 MREEGYI 548
MR+EGY+
Sbjct: 794 MRKEGYV 800
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 209/445 (46%), Gaps = 47/445 (10%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETD- 66
+ L R + + + GI PD++ ++LKA+A + K+ H V + G D
Sbjct: 75 SNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVAD--LQDMELGKQIHAHVYKFGYGVDS 132
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF--YEECKRLYMEM 124
+ V N LV Y +CG+ G KVFD + ER+ VSWNS+I S C F +E + M
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS--SLCSFEKWEMALEAFRCM 190
Query: 125 LSVGSVVPDGVTIVSVMQACGQ---SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
L +V P T+VSV+ AC + L++G +VH + G E++ + N ++AMY K
Sbjct: 191 LD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGK 248
Query: 182 CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGM 241
G L ++ L +D L TWN ++S +
Sbjct: 249 LGKLASSKVLLGSFGGRD-------------------------------LVTWNTVLSSL 277
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR-CYDQN 300
QN A++ +REM G++P+ T++S +P S+ LR GKE+HAYA++ D+N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+V +A++D Y + R+VFD R + +W A+I Y+ + AL L+ M +
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 361 S-GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
S G+ + T+ V+ AC SG I + K G+ ++ + SR GK+
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV-VKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 420 SEAAKFISEMPIEPSAKAWGALLNG 444
A + +M + W ++ G
Sbjct: 457 DIAMRIFGKME-DRDLVTWNTMITG 480
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
W L+ V++N A+ +M G+KP+ + + + ++ GK++HA+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 294 RRCYD-QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+ Y ++ VA +++ Y K G +VFD+ R+ V W ++I++ + +AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAH 379
+ MLD ++P TL +V+TAC++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 357 bits (915), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 320/586 (54%), Gaps = 42/586 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ A + L+ + +F+ G+ PDS + ++ K A S +K K+ HC
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE--LSAFKVGKQIHCVSCV 144
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTV--------------------- 99
GL+ D FV+ ++ Y RCG +G ARKVFD M ++D V
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRI 204
Query: 100 --------------SWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
SWN ++ G+++ G+++E ++ ++ +G PD VT+ SV+ + G
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG-FCPDQVTVSSVLPSVG 263
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
S+ L +G +HG+V + G+ D + +A+I MY K G + LF + + +
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSG 261
I+G G V KA ++F + ++ +W ++I+G QN A++L REMQ +G
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
+KPN VT+ S +P + L G+ H +A+R N++V +A+ID YAK G I+ ++
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
VF+ +++LV W +++ ++ HG A + ++ ++ + ++PD ++ T++L+AC G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGAL 441
L DE WK F M +YGI+P +E Y+CMV +L RAGKL EA I EMP EP + WGAL
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 442 LNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
LN + +V+ + A + LF +EPE+ G Y++++N+Y+ G W E +R +ME +G+
Sbjct: 564 LNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 502 KIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
K G SWI++ R+ +A D S+ + D+I ++ + MR+ G+
Sbjct: 624 KNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
+AR + + ++ D +I+ Y Y A V + + +P + ++++LI + +
Sbjct: 38 HAR-ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
F +I + M GL P++ L + + + S + GK++H + D + +V +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
+ Y + G + AR+VFD+ + +V +A++ AYA G + + ++M SGI+ +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMH 394
V+ +L+ SG EA +F +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIH 244
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 311/605 (51%), Gaps = 80/605 (13%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV---KEAHCFVLRRGLETDIFVENAL 73
LF + +G+ DS+T + V S SFS + V ++ H F+L+ G V N+L
Sbjct: 182 LFKKMMSSGVEMDSYTFSCV-----SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
V Y + + ARKVFD M ERD +SWNS+I GY G E+ ++++ML V + D
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEID 295
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD------- 186
TIVSV C S+ + LG VH ++ + CN ++ MY+KCG LD
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 187 ----------------YARE--------LFEEMSEK------------------------ 198
YARE LFEEM E+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 199 ----------DDVSYGSIISG-----YMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+D+ + +S Y G + +A VF M + +WN +I G +
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 244 NNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
N + A+ L + + P+ T+A +P + S G+E+H Y +R Y + +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
VA +++D YAK G + A +FD S+ LV WT +I Y HG A+ L+ QM +G
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
I+ D+++ ++L AC+HSGLVDE W+ FN M + I+P VE YAC+V +L+R G L +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
+FI MPI P A WGALL G ++ DV+ + + +FE+EPE++G Y++MAN+Y+ A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMM 542
+WE+ R+RKR+ + G+ K G SWIE+ GR+ F+A D SN ++ I +L + M
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Query: 543 REEGY 547
EEGY
Sbjct: 776 IEEGY 780
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 44/422 (10%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
D T+ SVL+ A K KE F+ G D + + L Y CG++ A +
Sbjct: 93 DPRTLCSVLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
VFD + + WN ++ ++ G + L+ +M+S G V D T V ++ +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLR 209
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
+ G ++HGF+ +SG + N+++A Y K +D AR++F+EM+E+D +S+ SII+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
GY++ G K VF M L+SG+ +
Sbjct: 270 GYVSNGLAEKGLSVFVQM----------LVSGI------------------------EID 295
Query: 269 LASTIPLFSYFSNLR---GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
LA+ + +F+ ++ R G+ VH+ ++ C+ + ++D Y+K G + A+ VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ RS+V +T++I YA G A A+ L+ +M + GI PD T+TAVL CA L+DE
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 386 AWKIFN-TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
++ + G V ++ + ++ G + EA SEM ++ +W ++ G
Sbjct: 416 GKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDII-SWNTIIGG 472
Query: 445 AS 446
S
Sbjct: 473 YS 474
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 11/255 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ GL + LF + GISPD +TVT+VL A + K H ++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR--YRLLDEGKRVHEWIKE 425
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
L DIFV NAL+ Y +CG + A VF M +D +SWN++IGGYS+ + E L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +L PD T+ V+ AC G E+HG++ +G D + N+++ MYA
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNA 236
KCG+L A LF++++ KD VS+ +I+GY +GF +A +F M G++ ++ +
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 237 LI-----SGMVQNNW 246
L+ SG+V W
Sbjct: 606 LLYACSHSGLVDEGW 620
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 167/394 (42%), Gaps = 67/394 (17%)
Query: 95 ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGM 154
+R N+ + + + G E +L + G D T+ SV+Q C SK L G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 155 EVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYG 214
EV F+ +G +D L + + MY CG L A +F+E+
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK------------------ 156
Query: 215 FVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIP 274
+ KA +F WN L++ + ++ F G+I L ++M SG++ ++ T +
Sbjct: 157 -IEKA--LF----------WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
FS ++ GG+++H + ++ + + V +++ Y K + AR+VFD+ R ++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV----------- 383
W +II Y ++G A L ++ QML SGI+ D T+ +V CA S L+
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 384 -------DEAWKIFNTMHSKYG------------IQPLVEQYACMVGVLSRAGKLSEAAK 424
D M+SK G V Y M+ +R G EA K
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 425 FISEMP---IEPSAKAWGALLNGASVYGDVETGK 455
EM I P A+LN + Y ++ GK
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 307/550 (55%), Gaps = 37/550 (6%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
YS N ++ L ++++ A +SPDSFT +LKA + S+ + + H V R G +
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRFVHAQVFRLGFD 151
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDG--MPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
D+FV+N L+ Y +C +G AR VF+G +PER VSW +++ Y+Q G E ++
Sbjct: 152 ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
+M + V PD V +VSV+ A +DL G +H V + G+E++ L ++ MYAKC
Sbjct: 212 QMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G + A+ LF++M + + + ++ISGY G+ AR+
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGY---ARE--------------------- 306
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
AID+ EM ++P+ +++ S I + +L + ++ Y R Y +++
Sbjct: 307 -------AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+++A+ID +AK G + GAR VFD+ R +V+W+A+I Y HG A A+ LY M G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
+ P+ VT +L AC HSG+V E W FN M + + I P + YAC++ +L RAG L +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
+ I MP++P WGALL+ + VE G++A LF I+P ++G+Y+ ++NLY+ A
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMM 542
W+ + VR RM+E G++K G SW+E+ GRL AF D S+ R +EI +E + +
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRL 598
Query: 543 REEGYILQEE 552
+E G++ ++
Sbjct: 599 KEGGFVANKD 608
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 216/431 (50%), Gaps = 44/431 (10%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
++GI DSF + + S ++ +K+ H +L GL+ F+ L+ G
Sbjct: 14 TNSGIHSDSFYASLI------DSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVM 141
+I AR+VFD +P WN++I GYS+ +++ +Y M + V PD T ++
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLL 126
Query: 142 QACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE--EMSEKD 199
+AC L +G VH V G + D+ + N +IA+YAKC L AR +FE + E+
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
VS+ +I+S Y G ++A ++F M R+M
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQM----------------------------RKMD- 217
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
+KP+ V L S + F+ +L+ G+ +HA ++ + + ++ YAK G +
Sbjct: 218 --VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
A+ +FD+ +S +L++W A+I+ YA +G A A+ ++ +M++ ++PD +++T+ ++ACA
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 380 SGLVDEAWKIFNTM-HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
G +++A ++ + S Y + + ++ + ++ G + E A+ + + ++ W
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTLDRDVVVW 392
Query: 439 GALLNGASVYG 449
A++ G ++G
Sbjct: 393 SAMIVGYGLHG 403
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 22/302 (7%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
AY+ NG L++F+ + PD + SVL A K + H V++ GL
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC--LQDLKQGRSIHASVVKMGL 253
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E + + +L T Y +CG++ A+ +FD M + + WN+MI GY++ G+ E ++ E
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M++ V PD ++I S + AC Q L ++ +V S D+ + +A+I M+AKCG
Sbjct: 314 MIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALI- 238
S++ AR +F+ ++D V + ++I GY +G +A ++R ME G+ T+ L+
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 239 ----SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
SGMV+ W+ M + P A I L R G AY +
Sbjct: 433 ACNHSGMVREGWW-----FFNRMADHKINPQQQHYACVIDLLG-----RAGHLDQAYEVI 482
Query: 295 RC 296
+C
Sbjct: 483 KC 484
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 152/319 (47%), Gaps = 10/319 (3%)
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+I ++G + AR VF + P + WNA+I G +NN F+ A+ + MQ + + P+
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
+ T + S S+L+ G+ VHA R +D +++V +I YAK + AR VF+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 326 --QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV 383
R++V WTAI++AYA +G+ AL +++QM ++PD V L +VL A +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 384 DEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLN 443
+ I ++ K G++ + + + ++ G+++ A +M P+ W A+++
Sbjct: 239 KQGRSIHASV-VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMIS 296
Query: 444 GASVYGDVETGKFACDHLFE-IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHK 502
G Y + A D E I + + I + + S + + R E +G
Sbjct: 297 G---YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 503 IRGSSWIEMSGRLIAFIAK 521
R +I S LI AK
Sbjct: 354 YRDDVFI--SSALIDMFAK 370
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ NG R +D+F ++ + PD+ ++TS + A A + + + +V R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA--QVGSLEQARSMYEYVGR 351
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
D+F+ +AL+ + +CG + AR VFD +RD V W++MI GY G E L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y M G V P+ VT + ++ AC S + G + + I VI +
Sbjct: 412 YRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 181 KCGSLDYARELFEEMSEKDDVS-YGSIISG 209
+ G LD A E+ + M + V+ +G+++S
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 198/584 (33%), Positives = 310/584 (53%), Gaps = 39/584 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +S N ++LF G PD+FT SVL +A + K + H L+
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVA-DDEKQCVQFHAAALK 177
Query: 61 RGLETDIFVENALVTCYCRCGE----IGLARKVFDGMPERDTVSW--------------- 101
G V NALV+ Y +C + ARKVFD + E+D SW
Sbjct: 178 SGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDL 237
Query: 102 -----------------NSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
N+MI GY GFY+E + M+S G + D T SV++AC
Sbjct: 238 GEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-IELDEFTYPSVIRAC 296
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
+ L LG +VH +V + N+++++Y KCG D AR +FE+M KD VS+
Sbjct: 297 ATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
+++SGY++ G + +A+ +F+ M+ + +W +ISG+ +N + E + L M+ G +P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
+ I + G++ HA ++ +D ++ A+I YAK G + ARQVF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
V W A+I A HG + A+ +Y +ML GI+PD++TL VLTAC+H+GLVD
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVD 535
Query: 385 EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ K F++M + Y I P + YA ++ +L R+GK S+A I +P +P+A+ W ALL+G
Sbjct: 536 QGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Query: 445 ASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIR 504
V+G++E G A D LF + PE G Y++++N+++ G+WEE +RVRK M + GV K
Sbjct: 596 CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 505 GSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
SWIEM ++ F+ D S+ ++ +Y YL+ L MR GY+
Sbjct: 656 ACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 183/346 (52%), Gaps = 15/346 (4%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMP--ERDTVSWNSMIGGYSQCGFYEECKRLY 121
E D +V+ YC G+I LAR VF+ P RDTV +N+MI G+S L+
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQ-SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+M G PD T SV+ + D ++ H +SG + NA++++Y+
Sbjct: 137 CKMKHEG-FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYS 195
Query: 181 KCGS----LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM-ENPGLDTWN 235
KC S L AR++F+E+ EKD+ S+ ++++GY+ G+ ++ GM +N L +N
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
A+ISG V +++ A+++VR M SG++ + T S I + L+ GK+VHAY +RR
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLY 355
D + + +++ Y K G AR +F++ ++ LV W A+++ Y + G A ++
Sbjct: 316 -EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 356 AQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+M + I ++ +++ A +G +E K+F+ M + G +P
Sbjct: 375 KEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCM-KREGFEP 415
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 42/346 (12%)
Query: 150 LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
L L VHG + G + + N +I +Y K L+YAR+LF+E+SE D ++ +++SG
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 210 YMAYGFVVKARDVFRGMENPGLDT--WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
Y A G + AR VF DT +NA+I+G NN AI+L +M+ G KP+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 268 TLASTIPLFSYFS-NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG----FIHGARQ 322
T AS + + + + + + HA A++ V+ A++ Y+K +H AR+
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 323 VFDQARSRSLVIWTAIITAYAAHGDASL-------------------------------- 350
VFD+ + WT ++T Y +G L
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
AL + +M+ SGI+ D+ T +V+ ACA +GL+ ++ + + + +V
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLV 327
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKF 456
+ + GK EA +MP + +W ALL+G G + K
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLV-SWNALLSGYVSSGHIGEAKL 372
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 304/580 (52%), Gaps = 70/580 (12%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
++ L+ L F +G PD SVLK+ + + H F++R G++
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTM--MMDLRFGESVHGFIVRLGMD 137
Query: 65 TDIFVENALVTCYCRCGEIGL------------------------------------ARK 88
D++ NAL+ Y + +G R+
Sbjct: 138 CDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR 197
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
VF+ MP +D VS+N++I GY+Q G YE+ R+ EM + PD T+ SV+ +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYV 256
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
D++ G E+HG+V GI+ D+ + ++++ MYAK ++ + +F + +D +S
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS------ 310
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
WN+L++G VQN + A+ L R+M + +KP AV
Sbjct: 311 -------------------------WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 269 LASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR 328
+S IP ++ + L GK++H Y +R + NI++A+A++D Y+K G I AR++FD+
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 329 SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWK 388
V WTAII +A HG A+ L+ +M G++P+QV AVLTAC+H GLVDEAW
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 389 IFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVY 448
FN+M YG+ +E YA + +L RAGKL EA FIS+M +EP+ W LL+ SV+
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Query: 449 GDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
++E + + +F ++ E+ G Y++M N+Y+ GRW+E +++R RM + G+ K SW
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585
Query: 509 IEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
IEM + F++ D S+ D+I +L+ + M +EGY+
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 137/234 (58%), Gaps = 9/234 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV---KEAHCF 57
++ Y+ +G+Y L + + PDSFT++SVL P FS Y V KE H +
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL-----PIFSEYVDVIKGKEIHGY 267
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
V+R+G+++D+++ ++LV Y + I + +VF + RD +SWNS++ GY Q G Y E
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
RL+ +M++ V P V SV+ AC L LG ++HG+V G ++ + +A++
Sbjct: 328 LRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
MY+KCG++ AR++F+ M+ D+VS+ +II G+ +G +A +F M+ G+
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 158/406 (38%), Gaps = 87/406 (21%)
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS---IISGYMAYGFVVKARDVFRGME 227
L +I + S A++L + +S+ S +IS Y + +A +F+ ++
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+P + W ++I + F A+ EM+ SG P+ S + + +LR G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAK-LGF------------------------------ 316
VH + +R D ++Y A+++ YAK LG
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 317 -----IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
I R+VF+ + +V + II YA G AL + +M + ++PD TL+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 372 AVLTAC-----------------------------------AHSGLVDEAWKIFNTMHSK 396
+VL A S ++++ ++F+ ++ +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVET 453
GI + +V + G+ +EA + +M ++P A A+ +++ + +
Sbjct: 307 DGI-----SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 454 GKFACDHLFEIEPESSGNYII---MANLYSCAGRWEEASRVRKRME 496
GK H + + N I + ++YS G + A ++ RM
Sbjct: 362 GKQL--HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 294/520 (56%), Gaps = 3/520 (0%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
D F+ +LKA++ S + E H + D FVE + Y CG I AR
Sbjct: 110 DQFSFLPILKAVSKVSALFEG--MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARN 167
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
VFD M RD V+WN+MI Y + G +E +L+ EM +V+PD + + +++ ACG++
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGRTG 226
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
++ ++ F+ E+ + +D L A++ MYA G +D ARE F +MS ++ +++S
Sbjct: 227 NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVS 286
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
GY G + A+ +F E L W +IS V++++ + A+ + EM SG+KP+ V+
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
Query: 269 LASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR 328
+ S I + L K VH+ + + + A+I+ YAK G + R VF++
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 329 SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWK 388
R++V W+++I A + HG+AS AL L+A+M ++P++VT VL C+HSGLV+E K
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 389 IFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVY 448
IF +M +Y I P +E Y CMV + RA L EA + I MP+ + WG+L++ ++
Sbjct: 467 IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH 526
Query: 449 GDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
G++E GKFA + E+EP+ G ++M+N+Y+ RWE+ +R+ MEE V K +G S
Sbjct: 527 GELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSR 586
Query: 509 IEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
I+ +G+ F+ D +++S+EIY L+ + ++ GY+
Sbjct: 587 IDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYV 626
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY + + L +F +GI PD ++ SV+ A A + K H +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA--NLGILDKAKWVHSCIHV 372
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLE+++ + NAL+ Y +CG + R VF+ MP R+ VSW+SMI S G + L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG-FVNESGIEVDLPLCNAVIAMY 179
+ M +V P+ VT V V+ C S + G ++ +E I L ++ ++
Sbjct: 433 FARM-KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 491
Query: 180 AKCGSLDYARELFEEMSEKDDVS-YGSIISGYMAYG 214
+ L A E+ E M +V +GS++S +G
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 290/522 (55%), Gaps = 2/522 (0%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
L+ + + G++PDS T +L + + K+ HC V++ GL ++++V+NALV
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGAL-ACGKKLHCHVVKFGLGSNLYVQNALVKM 179
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y CG + +AR VFD + D SWN MI GY++ YEE L +EM V P VT
Sbjct: 180 YSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVT 238
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
++ V+ AC + KD L VH +V+E E L L NA++ YA CG +D A +F M
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
+D +S+ SI+ GY+ G + AR F M +W +I G ++ F ++++ RE
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
MQ +G+ P+ T+ S + ++ +L G+ + Y + ++ V A+ID Y K G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
A++VF R WTA++ A +G A+ ++ QM D IQPD +T VL+A
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
C HSG+VD+A K F M S + I+P + Y CMV +L RAG + EA + + +MP+ P++
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 437 AWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRME 496
WGALL + ++ D + A + E+EP++ Y ++ N+Y+ RW++ VR+++
Sbjct: 539 VWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIV 598
Query: 497 EIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
++ + K G S IE++G F+A D S+ +S+EIY LE L
Sbjct: 599 DVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEEL 640
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVL 59
M+ Y G + L++F AG+ PD FT+ SVL A A S + +K ++
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK---TYID 395
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ ++ D+ V NAL+ Y +CG A+KVF M +RD +W +M+ G + G +E +
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ +M + S+ PD +T + V+ AC S
Sbjct: 456 VFFQMQDM-SIQPDDITYLGVLSACNHS-------------------------------- 482
Query: 180 AKCGSLDYARELFEEMS-----EKDDVSYGSIISGYMAYGFVVKARDVFRGME-NPGLDT 233
G +D AR+ F +M E V YG ++ G V +A ++ R M NP
Sbjct: 483 ---GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV 539
Query: 234 WNALISGMVQNN 245
W AL+ +N
Sbjct: 540 WGALLGASRLHN 551
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 292/541 (53%), Gaps = 38/541 (7%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
+ ++ H ++ L + + L+ Y ++ ARKVFD +PER+ + N MI Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
GFY E +++ M +V PD T V++AC S +V+G ++HG + G+
Sbjct: 116 VNNGFYGEGVKVFGTMCGC-NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY------------------ 210
L + N +++MY KCG L AR + +EMS +D VS+ S++ GY
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 211 ---------MAYGF----------VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
MA V+ +D+F M L +WN +I ++N A+
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
+L M+ G +P+AV++ S +P S L GK++H Y R+ N+ + A+ID Y
Sbjct: 295 ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
AK G + AR VF+ +SR +V WTA+I+AY G A+ L++++ DSG+ PD +
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
L AC+H+GL++E F M Y I P +E ACMV +L RAGK+ EA +FI +M +
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
EP+ + WGALL V+ D + G A D LF++ PE SG Y++++N+Y+ AGRWEE + +
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 534
Query: 492 RKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQE 551
R M+ G+ K G+S +E++ + F+ D S+ +SDEIY L+ L M+E GY+
Sbjct: 535 RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Query: 552 E 552
E
Sbjct: 595 E 595
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 190/475 (40%), Gaps = 123/475 (25%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +Y NG Y + +F + + PD +T VLKA + ++ H +
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG--RKIHGSATK 168
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL + +FV N LV+ Y +CG + AR V D M RD VSWNS++ GY+Q +++ +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQS--------KDLVLGM------------------ 154
EM SV + D T+ S++ A + KD+ M
Sbjct: 229 CREMESV-KISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 155 -------EVHGFVNESGIEVD-------LPLC---------------------------- 172
E++ + G E D LP C
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
NA+I MYAKCG L+ AR++FE M +D VS+ ++IS AYGF + D
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS---AYGFSGRGCD----------- 393
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
A+ L ++Q SGL P+++ +T+ S+ L G
Sbjct: 394 -----------------AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG------- 429
Query: 293 IRRCYD--QNIYVATA-------IIDTYAKLGFIHGA-RQVFDQARSRSLVIWTAIITAY 342
R C+ + Y T ++D + G + A R + D + + +W A++ A
Sbjct: 430 -RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC-AHSGLVDEAWKIFNTMHSK 396
H D + L ++ + P+Q +L+ A +G +E I N M SK
Sbjct: 489 RVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
+ + ++R + VH+ I N + ++ YA L + AR+VFD+ R+++I
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH 394
+I +Y +G + ++ M ++PD T VL AC+ SG + KI +
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA- 166
Query: 395 SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+K G+ + +V + + G LSEA + EM +W +L+ G
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVG 215
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 302/554 (54%), Gaps = 35/554 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y +GL L F + +G+ PD+ T +S+L +++ F + K+ HC+++R
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK--FENLEYCKQIHCYIMR 368
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ DIF+ +AL+ Y +C + +A+ +F D V + +MI GY G Y + +
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ ++ V + P+ +T+VS++ G L LG E+HGF+ + G + + AVI MYA
Sbjct: 429 FRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG ++ A E+FE +S++D VS WN++I+
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVS-------------------------------WNSMITR 516
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
Q++ AID+ R+M SG+ + V++++ + + + GK +H + I+ +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+Y + +ID YAK G + A VF + +++V W +II A HG +L L+ +M++
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 361 -SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
SGI+PDQ+T ++++C H G VDE + F +M YGIQP E YAC+V + RAG+L
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+EA + + MP P A WG LL ++ +VE + A L +++P +SG Y++++N +
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAH 756
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ A WE ++VR M+E V KI G SWIE++ R F++ DV++ S IY+ L L
Sbjct: 757 ANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLL 816
Query: 540 CMMREEGYILQEEL 553
+R EGYI Q L
Sbjct: 817 GELRLEGYIPQPYL 830
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 245/537 (45%), Gaps = 82/537 (15%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML Y+ G ++ F+ ISP++ T VL AS + H V+
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL--IDLGVQLHGLVVV 267
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G++ + ++N+L++ Y +CG A K+F M DTV+WN MI GY Q G EE
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ EM+S G V+PD +T S++ + + ++L ++H ++ I +D+ L +A+I Y
Sbjct: 328 FYEMISSG-VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC + A+ +F + + D V + ++ISGY+ G + + ++FR W
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR---------W------ 431
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
LV+ + PN +TL S +P+ L+ G+E+H + I++ +D
Sbjct: 432 ------------LVK----VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ A+ID YAK G ++ A ++F++ R +V W ++IT A + S A+ ++ QM
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 361 SGIQPDQVTLTAVLTACAH--------------------------SGLVD---------E 385
SGI D V+++A L+ACA+ S L+D
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP----IEPSAKAWGAL 441
A +F TM K + + ++ GKL ++ EM I P + +
Sbjct: 596 AMNVFKTMKEKN-----IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 442 LNGASVYGDVETGKFACDHLFE---IEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
++ GDV+ G + E I+P+ +Y + +L+ AGR EA K M
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE-HYACVVDLFGRAGRLTEAYETVKSM 706
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 34/367 (9%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
NGL L + + G+SPD T ++KA + +K + V G++ +
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA--LKNFKGIDFLSDTVSSLGMDCNE 173
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
FV ++L+ Y G+I + K+FD + ++D V WN M+ GY++CG + + + ++ +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF-SVMRM 232
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
+ P+ VT V+ C + LG+++HG V SG++ + + N++++MY+KCG D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
A +LF MS D V++ +ISGY VQ+
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGY-------------------------------VQSGLM 321
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E ++ EM SG+ P+A+T +S +P S F NL K++H Y +R +I++ +A+
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
ID Y K + A+ +F Q S +V++TA+I+ Y +G +L ++ ++ I P++
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 368 VTLTAVL 374
+TL ++L
Sbjct: 442 ITLVSIL 448
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 133/349 (38%), Gaps = 62/349 (17%)
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKD 199
++QAC L G +VH F+ + I D ++ MYA CGS ++F +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL---- 96
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
D+ R P WN++IS V+N A+ +M
Sbjct: 97 ---------------------DLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKMLC 131
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
G+ P+ T + N +G + D N +VA+++I Y + G I
Sbjct: 132 FGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV 191
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
++FD+ + VIW ++ YA G + ++ M I P+ VT VL+ CA
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 380 SGLVDEAWKIFN------------------TMHSKYG------------IQPLVEQYACM 409
L+D ++ +M+SK G + + CM
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 410 VGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGK 455
+ ++G + E+ F EM + P A + +LL S + ++E K
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 288/549 (52%), Gaps = 34/549 (6%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
YS NG+ R L++ S + + P T+ SVL A+++ KE H + +R G +
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA--LRLISVGKEIHGYAMRSGFD 268
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
+ + + ALV Y +CG + AR++FDGM ER+ VSWNSMI Y Q +E ++ +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
L G V P V+++ + AC DL G +H E G++ ++ + N++I+MY KC
Sbjct: 329 LDEG-VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
+D A +F ++ + VS WNA+I G QN
Sbjct: 388 VDTAASMFGKLQSRTLVS-------------------------------WNAMILGFAQN 416
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
A++ +M+ +KP+ T S I + S K +H +R C D+N++V
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
TA++D YAK G I AR +FD R + W A+I Y HG AL L+ +M I+
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
P+ VT +V++AC+HSGLV+ K F M Y I+ ++ Y MV +L RAG+L+EA
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 425 FISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGR 484
FI +MP++P+ +GA+L ++ +V + A + LFE+ P+ G ++++AN+Y A
Sbjct: 597 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 656
Query: 485 WEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMRE 544
WE+ +VR M G+ K G S +E+ + +F + ++ S +IY +LE L C ++E
Sbjct: 657 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Query: 545 EGYILQEEL 553
GY+ L
Sbjct: 717 AGYVPDTNL 725
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 202/404 (50%), Gaps = 34/404 (8%)
Query: 46 SYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMI 105
S K +++ V + GL + F + LV+ +CR G + A +VF+ + + V +++M+
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
G+++ ++ + ++ M V P +++ CG +L +G E+HG + +SG
Sbjct: 108 KGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
+DL + MYAKC ++ AR++F+ M E+D VS
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS----------------------- 203
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
WN +++G QN A+++V+ M LKP+ +T+ S +P S + G
Sbjct: 204 --------WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
KE+H YA+R +D + ++TA++D YAK G + ARQ+FD R++V W ++I AY +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
+ A+ ++ +MLD G++P V++ L ACA G ++ + + + + G+ V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSV 374
Query: 406 YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
++ + + ++ AA ++ + +W A++ G + G
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNG 417
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 300/550 (54%), Gaps = 16/550 (2%)
Query: 18 FASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCY 77
FA G + ++ SVL A + + K V + H + + +D+++ +ALV Y
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLN-DMNKGV-QVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 78 CRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
+CG + A++VFD M +R+ VSWNS+I + Q G E ++ ML V PD VT+
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEPDEVTL 256
Query: 138 VSVMQACGQSKDLVLGMEVHG-FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
SV+ AC + +G EVHG V + D+ L NA + MYAKC + AR +F+ M
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
++ ++ S+ISGY AR +F M + +WNALI+G QN E A+ L
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY------DQNIYVATAIIDT 310
++ + P + A+ + + + L G + H + ++ + + +I+V ++ID
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
Y K G + VF + R V W A+I +A +G + AL L+ +ML+SG +PD +T+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
VL+AC H+G V+E F++M +G+ PL + Y CMV +L RAG L EA I EMP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 431 IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASR 490
++P + WG+LL V+ ++ GK+ + L E+EP +SG Y++++N+Y+ G+WE+
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 491 VRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREE----- 545
VRK M + GV K G SWI++ G F+ KD S+ R +I++ L+ L MR E
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676
Query: 546 -GYILQEELD 554
G + EE+D
Sbjct: 677 IGSLSSEEMD 686
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMY 179
++++ + S D ++ +C +SK + + VH V +SG ++ + N +I Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
+KCGSL+ R++F++M +++ ++ S+++G GF+ +A +FR M TWN+++S
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G Q++ E A+ M G N + AS + S +++ G +VH+ + +
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++Y+ +A++D Y+K G ++ A++VFD+ R++V W ++IT + +G A AL ++ ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+S ++PD+VTL +V++ACA + ++ + ++ + V + ++ ++
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 420 SEAAKFISEMPI 431
EA MPI
Sbjct: 306 KEARFIFDSMPI 317
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 177/371 (47%), Gaps = 66/371 (17%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
V+ H V++ G +IF++N L+ Y +CG + R+VFD MP+R+ +WNS++ G ++
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 111 CGFYEECKRL------------------------------YMEMLSVGSVVPDGVTIVSV 140
GF +E L Y M+ V + + SV
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
+ AC D+ G++VH + +S D+ + +A++ MY+KCG+++ A+ +F+EM +++
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
VS+ S+I+ + G V+A DVF+ M S
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLE-------------------------------S 247
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN-IYVATAIIDTYAKLGFIHG 319
++P+ VTLAS I + S ++ G+EVH ++ +N I ++ A +D YAK I
Sbjct: 248 RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKE 307
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
AR +FD R+++ T++I+ YA A ++ +M + + V+ A++
Sbjct: 308 ARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQ 363
Query: 380 SGLVDEAWKIF 390
+G +EA +F
Sbjct: 364 NGENEEALSLF 374
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 183/410 (44%), Gaps = 86/410 (20%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ + NG LD+F +++ + PD T+ SV+ A A S S K +E H V++
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA--SLSAIKVGQEVHGRVVK 281
Query: 61 RG-LETDIFVENALVTCYCRCGEIGLARKVFDGMP------------------------- 94
L DI + NA V Y +C I AR +FD MP
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 95 ------ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
ER+ VSWN++I GY+Q G EE L+ +L SV P + ++++AC
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLA 400
Query: 149 DLVLGMEV------HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
+L LGM+ HGF +SG E D+ + N++I MY KCG ++ +F +M E+D VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL 262
+ ++I G+ QN + A++L REM SG
Sbjct: 461 WNAMIIGF-------------------------------AQNGYGNEALELFREMLESGE 489
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA------TAIIDTYAKLGF 316
KP+ +T+ + + + G+ + R + VA T ++D + GF
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTR-----DFGVAPLRDHYTCMVDLLGRAGF 544
Query: 317 IHGARQVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
+ A+ + ++ + VIW +++ A H + +L + ++L+ ++P
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE--VEP 592
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 310/599 (51%), Gaps = 75/599 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ +Y+ N L+ ++ + V GI PD+FT SVLKA + V H +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV--VHGSIEV 172
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
++ ++V NAL++ Y R +G+AR++FD M ERD VSWN++I Y+ G + E L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 121 YMEM-------------------LSVGSVVP---------------DGVTIVSVMQACGQ 146
+ +M L G+ V D V ++ ++AC
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSL 292
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
+ LG E+HG S + + N +I MY+KC L +A +
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHA-----------------L 335
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
I VFR E L TWN++ISG Q N E A L+REM +G +PN+
Sbjct: 336 I--------------VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNS 381
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
+TLAS +PL + +NL+ GKE H Y +RR C+ + +++D YAK G I A+QV D
Sbjct: 382 ITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSD 441
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
R V +T++I Y G+ +AL L+ +M SGI+PD VT+ AVL+AC+HS LV E
Sbjct: 442 LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
++F M +YGI+P ++ ++CMV + RAG L++A I MP +PS W LLN
Sbjct: 502 GERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNAC 561
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
++G+ + GK+A + L E++PE+ G Y+++AN+Y+ AG W + + VR M ++GV K G
Sbjct: 562 HIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPG 621
Query: 506 SSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREE-GYILQ------EELDCEM 557
+WI+ F D S+ + Y L+GL +M++ GY + EEL EM
Sbjct: 622 CAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINKVQSSDEELLQEM 680
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 231/483 (47%), Gaps = 25/483 (5%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
AHC + G+E + LVT Y A+ + + + WN +I Y++
Sbjct: 66 HAHC--ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+EE Y M+S G + PD T SV++ACG++ D+ G VHG + S + L +C
Sbjct: 124 LFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
NA+I+MY + ++ AR LF+ M E+D VS+ ++I+ Y + G +A ++F M G++
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 233 ----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
TWN + G +Q + GA+ L+ M+ + V + + S +R GKE+
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H AI YD V +I Y+K + A VF Q SL W +II+ YA +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A L +ML +G QP+ +TL ++L CA + + + + + +
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE----- 463
+V V +++GK+ AAK +S++ + + +L++G YG+ G A E
Sbjct: 423 LVDVYAKSGKIV-AAKQVSDLMSKRDEVTYTSLIDG---YGNQGEGGVALALFKEMTRSG 478
Query: 464 IEPESSGNYIIMANLYSCAGRW--EEASRVRKRME-EIGVHKI--RGSSWIEMSGRLIAF 518
I+P+ + ++A L +C+ E R+ +M+ E G+ S +++ GR F
Sbjct: 479 IKPD---HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR-AGF 534
Query: 519 IAK 521
+AK
Sbjct: 535 LAK 537
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 34/276 (12%)
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTI---VSVMQACGQSKDLVLGMEVHGFVNESGI 165
S ++ K + L S V D + + S++ AC + + G++VH SG+
Sbjct: 15 SHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGV 74
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
E L ++ Y+ + A+ + E D+
Sbjct: 75 EYHSVLVPKLVTFYSAFNLHNEAQSIIEN-------------------------SDILHP 109
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
+ WN LI+ +N FE I + M G++P+A T S + ++ G
Sbjct: 110 LP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
+ VH Y ++YV A+I Y + + AR++FD+ R V W A+I YA+
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
G S A L+ +M SG++ +T + C +G
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 286/521 (54%), Gaps = 37/521 (7%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ P T +LKA+ S P + H +++ GL++D FV N+L++ Y G
Sbjct: 99 GVIPSRHTFPPLLKAVFKLRDS--NPF-QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD 155
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
A ++FDG ++D V+W +MI G+ + G E ++EM G V + +T+VSV++A
Sbjct: 156 FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTG-VAANEMTVVSVLKAA 214
Query: 145 GQSKDLVLGMEVHGFVNESG-IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
G+ +D+ G VHG E+G ++ D+ + ++++ MY KC D A+++F+EM ++ V
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV-- 272
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
TW ALI+G VQ+ F+ + + EM S +
Sbjct: 273 -----------------------------TWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
PN TL+S + ++ L G+ VH Y I+ + N T +ID Y K G + A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV 383
F++ +++ WTA+I +AAHG A A L+ ML S + P++VT AVL+ACAH GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 384 DEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLN 443
+E ++F +M ++ ++P + YACMV + R G L EA I MP+EP+ WGAL
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 444 GASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKI 503
++ D E GK+A + +++P SG Y ++ANLYS + W+E +RVRK+M++ V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 504 RGSSWIEMSGRLIAFIAKDVSNE-RSDEIYTYLEGLFCMMR 543
G SWIE+ G+L FIA D SD++Y L+ + MR
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 206/460 (44%), Gaps = 58/460 (12%)
Query: 47 YYKPVKEAHCFVLRRGL---ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNS 103
++ +K+ HC +L + D+F+ L C + AR++ + W+S
Sbjct: 13 HFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDS 72
Query: 104 MIGGYSQCGFYEECKRL----YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGF 159
+IG +S G +RL Y M G V+P T +++A + +D + H
Sbjct: 73 LIGHFS--GGITLNRRLSFLAYRHMRRNG-VIPSRHTFPPLLKAVFKLRD-SNPFQFHAH 128
Query: 160 VNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKA 219
+ + G++ D + N++I+ Y+ G D+A LF+ +KD V++ ++I G+
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGF--------- 179
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
V+N A+ EM+ +G+ N +T+ S +
Sbjct: 180 ----------------------VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKV 217
Query: 280 SNLRGGKEVHAYAIR----RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
++R G+ VH + +C ++++ ++++D Y K A++VFD+ SR++V W
Sbjct: 218 EDVRFGRSVHGLYLETGRVKC---DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTW 274
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
TA+I Y + ++ +ML S + P++ TL++VL+ACAH G + ++ M
Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM-I 333
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGK 455
K I+ ++ + + G L EA + E E + W A++NG + +G +
Sbjct: 334 KNSIEINTTAGTTLIDLYVKCGCLEEAI-LVFERLHEKNVYTWTAMINGFAAHG---YAR 389
Query: 456 FACDHLFEIEPE--SSGNYIIMANLYSCA--GRWEEASRV 491
A D + + S MA L +CA G EE R+
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 314/554 (56%), Gaps = 18/554 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAG-ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
++ Y+ N + LF + V G +SPDS T+ S+L A + KE H ++L
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQ--LTDLASGKEIHSYIL 357
Query: 60 RRG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS----QCGFY 114
R L D V NAL++ Y R G+ A F M +D +SWN+++ ++ Q F
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI---EVDLPL 171
L E +++ D VTI+S+++ C + + EVHG+ ++G+ E + L
Sbjct: 418 NLLHHLLNEAITL-----DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKL 472
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDD-VSYGSIISGYMAYGFVVKARDVFRGMENPG 230
NA++ YAKCG+++YA ++F +SE+ VSY S++SGY+ G A+ +F M
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTD 532
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
L TW+ ++ ++ AI + RE+Q G++PN VT+ + +P+ + ++L ++ H
Sbjct: 533 LTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHG 592
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
Y IR +I + ++D YAK G + A VF R LV++TA++ YA HG
Sbjct: 593 YIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
AL +Y+ M +S I+PD V +T +LTAC H+GL+ + +I++++ + +G++P +EQYAC V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG 470
+++R G+L +A F+++MP+EP+A WG LL + Y ++ G +HL + E + +G
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 471 NYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDE 530
N+++++N+Y+ +WE +R M++ + K G SW+E+ G+ F++ D S+ R D
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDS 831
Query: 531 IYTYLEGLFCMMRE 544
I+ + L+ M+E
Sbjct: 832 IFDLVNALYLQMKE 845
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 39/356 (10%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEI-GLA 86
P S T VL SY K H ++++ GLE D V NALV+ Y + G I A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNG--KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
FDG+ ++D VSWN++I G+S+ + R + ML P+ TI +V+ C
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCAS 236
Query: 147 -SKDLVL--GMEVHGF-VNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
K++ G ++H + V S ++ + +CN++++ Y + G ++ A LF M KD VS
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL 262
+ +I+GY + KA +F + + G +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKG------------------------------DV 326
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY-DQNIYVATAIIDTYAKLGFIHGAR 321
P++VT+ S +P+ + ++L GKE+H+Y +R Y ++ V A+I YA+ G A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
F ++ ++ W AI+ A+A L L +L+ I D VT+ ++L C
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 164/363 (45%), Gaps = 42/363 (11%)
Query: 24 AGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEI 83
+G D V+KA AS S + H V + G V +++ Y +C +
Sbjct: 15 SGFGTDHRVFLDVVKACAS--VSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 84 GLARKVFDGMPERDTVSWNSMIGGYS-QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+K+F M D V WN ++ G S CG E R + M P VT V+
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL-DYARELFEEMSEKDDV 201
C + D G +H ++ ++G+E D + NA+++MYAK G + A F+ +++KD V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
S WNA+I+G +NN A M
Sbjct: 191 S-------------------------------WNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 262 LKPNAVTLASTIPLFSYFSN---LRGGKEVHAYAIRRCYDQ-NIYVATAIIDTYAKLGFI 317
+PN T+A+ +P+ + R G+++H+Y ++R + Q +++V +++ Y ++G I
Sbjct: 220 TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQVTLTAVLTA 376
A +F + S+ LV W +I YA++ + A L+ ++ G + PD VT+ ++L
Sbjct: 280 EEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPV 339
Query: 377 CAH 379
CA
Sbjct: 340 CAQ 342
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 71/418 (16%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYY-KPVKEAHCFVL 59
++ +S N + F + P+ T+ +VL AS + + ++ H +V+
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 60 RRG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY-SQCGFYEEC 117
+R L+T +FV N+LV+ Y R G I A +F M +D VSWN +I GY S C +++
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAF 314
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV-NESGIEVDLPLCNAVI 176
+ L+ ++ G V PD VTI+S++ C Q DL G E+H ++ S + D + NA+I
Sbjct: 315 Q-LFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
+ YA+ G A F MS KD +S WNA
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKDIIS-------------------------------WNA 402
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
++ + ++L+ + + ++VT+ S + + KEVH Y+++
Sbjct: 403 ILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAG 462
Query: 297 Y---DQNIYVATAIIDTYAKLGFIHGARQVF-DQARSRSLVIWTAIITAY---AAHGDAS 349
++ + A++D YAK G + A ++F + R+LV + ++++ Y +H DA
Sbjct: 463 LLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQ 522
Query: 350 L----------------------------ALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
+ A+G++ ++ G++P+ VT+ +L CA
Sbjct: 523 MLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 127/312 (40%), Gaps = 57/312 (18%)
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D + V++AC DL G +HG V + G + +V+ MYAKC +D +++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
+M D V + +++G V R+ R F A+
Sbjct: 80 RQMDSLDPVVWNIVLTGLS----VSCGRETMR----------------------FFKAMH 113
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
E KP++VT A +PL + GK +H+Y I+ +++ V A++ YA
Sbjct: 114 FADEP-----KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA 168
Query: 313 KLGFIH-GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
K GFI A FD + +V W AII ++ + + A + ML +P+ T+
Sbjct: 169 KFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIA 228
Query: 372 AVLTACA--------------HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
VL CA HS +V +W +Q V +V R G
Sbjct: 229 NVLPVCASMDKNIACRSGRQIHSYVVQRSW-----------LQTHVFVCNSLVSFYLRVG 277
Query: 418 KLSEAAKFISEM 429
++ EAA + M
Sbjct: 278 RIEEAASLFTRM 289
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 282/496 (56%), Gaps = 32/496 (6%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K H ++R LE D+ + N L+ Y +CG + LAR+VFDGM ER VSWN+MIG Y++
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
E +++EM + G + TI SV+ ACG + D + ++H ++ I+++L +
Sbjct: 141 RMESEALDIFLEMRNEGFKFSE-FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
A++ +YAKCG + A ++FE M +K V++ S+++GY
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY--------------------- 238
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
VQN +E A+ L R Q L+ N TL+S I S + L GK++HA
Sbjct: 239 ----------VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
+ + N++VA++ +D YAK G + + +F + + ++L +W II+ +A H
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
+ L+ +M G+ P++VT +++L+ C H+GLV+E + F M + YG+ P V Y+CMV
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
+L RAG LSEA + I +P +P+A WG+LL VY ++E + A + LFE+EPE++GN
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGN 468
Query: 472 YIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEI 531
+++++N+Y+ +WEE ++ RK + + V K+RG SWI++ ++ F + + R EI
Sbjct: 469 HVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREI 528
Query: 532 YTYLEGLFCMMREEGY 547
+ L+ L R+ GY
Sbjct: 529 CSTLDNLVIKFRKFGY 544
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 46/358 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ N + LD+F + G FT++SVL A + K+ HC ++
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL--ECKKLHCLSVK 190
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
++ +++V AL+ Y +CG I A +VF+ M ++ +V+W+SM+ GY Q YEE L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y + S+ + T+ SV+ AC L+ G ++H + +SG ++ + ++ + MYA
Sbjct: 251 YRRAQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCGSL + +F E+ EK+ L+ WN +ISG
Sbjct: 310 KCGSLRESYIIFSEVQEKN-------------------------------LELWNTIISG 338
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY--D 298
++ + + L +MQ G+ PN VT +S + + + + G+ +R Y
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLS 397
Query: 299 QNIYVATAIIDTYAKLGFIHGARQV-----FDQARSRSLVIWTAIITAYAAHGDASLA 351
N+ + ++D + G + A ++ FD S IW +++ + + + LA
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS----IWGSLLASCRVYKNLELA 451
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 35/306 (11%)
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKD 199
++Q C ++ ++ HG + +E D+ L N +I Y+KCG ++ AR++F+ M E+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
VS+ ++I GL T N + S A+D+ EM+
Sbjct: 127 LVSWNTMI----------------------GLYTRNRMES---------EALDIFLEMRN 155
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
G K + T++S + + K++H +++ C D N+YV TA++D YAK G I
Sbjct: 156 EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD 215
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
A QVF+ + +S V W++++ Y + + AL LY + ++ +Q TL++V+ AC++
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 380 SGLVDEAWKIFNTM-HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
+ E ++ + S +G V A V + ++ G L E+ SE+ E + + W
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELW 332
Query: 439 GALLNG 444
+++G
Sbjct: 333 NTIISG 338
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 325 bits (832), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 319/613 (52%), Gaps = 71/613 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ ++ GLY + ++ V AG+ D+FT V+K++A S + K+ H V++
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG--ISSLEEGKKIHAMVIK 158
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +D++V N+L++ Y + G A KVF+ MPERD VSWNSMI GY G L
Sbjct: 159 LGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLML 218
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV-DLPLCNAVIAMY 179
+ EML G PD + +S + AC +G E+H S IE D+ + +++ MY
Sbjct: 219 FKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 180 AKCGSLDYARELF-------------------------------EEMSEKDDVS------ 202
+K G + YA +F ++MSE++ +
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 203 ----------YGSIISGY-MAYGFV-------------------VKARDVFRGMENPGLD 232
G I GY M GF+ A +F M +
Sbjct: 338 INLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVI 397
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+WN++I+ VQN A++L +E+ S L P++ T+AS +P ++ +L G+E+HAY
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
++ Y N + +++ YA G + AR+ F+ + +V W +II AYA HG +++
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
L+++M+ S + P++ T ++L AC+ SG+VDE W+ F +M +YGI P +E Y CM+ +
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
+ R G S A +F+ EMP P+A+ WG+LLN + + D+ +FA + +F++E +++G Y
Sbjct: 578 IGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCY 637
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
+++ N+Y+ AGRWE+ +R++ ME G+ + S +E G+ F D S+ +++IY
Sbjct: 638 VLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY 697
Query: 533 TYLEGLFCMMREE 545
L+ + M+ EE
Sbjct: 698 EVLDVVSRMVGEE 710
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 46/362 (12%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
A ++FD M + D WN MI G++ CG Y E + Y M+ G V D T V+++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG-VKADTFTYPFVIKSVA 141
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
L G ++H V + G D+ +CN++I++Y K G A ++FEEM E+D VS+ S
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+ISGY+A G D +++L+ L +EM G KP+
Sbjct: 202 MISGYLALG-----------------DGFSSLM--------------LFKEMLKCGFKPD 230
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIR-RCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
+ S + S+ + + GKE+H +A+R R ++ V T+I+D Y+K G + A ++F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD-SGIQPDQVTLTAVLTACAHSGLV 383
+ R++V W +I YA +G + A + +M + +G+QPD +T +L A A +
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----I 346
Query: 384 DEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
E T+H + G P + ++ + G+L A M E + +W +
Sbjct: 347 LEG----RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNS 401
Query: 441 LL 442
++
Sbjct: 402 II 403
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 15/287 (5%)
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
R+ ++ + +D + + G+ + A +F M WN +I G +
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
A+ M +G+K + T I + S+L GK++HA I+ + ++YV ++I
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
Y KLG A +VF++ R +V W ++I+ Y A GD +L L+ +ML G +PD+
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV-----GVLSRAGKLSEAA 423
+ + L AC+H + K+ +H + ++ +E MV + S+ G++S A
Sbjct: 233 STMSALGACSHV----YSPKMGKEIHC-HAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 424 KFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG 470
+ + M I+ + AW ++ + G V T F C F+ E +G
Sbjct: 288 RIFNGM-IQRNIVAWNVMIGCYARNGRV-TDAFLC---FQKMSEQNG 329
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 286/548 (52%), Gaps = 34/548 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML+AY R+ +F I P+ +T S+LK + ++ H +++
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR--LGDLELGEQIHSQIIK 518
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ + +V + L+ Y + G++ A + +D VSW +MI GY+Q F ++
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +ML G + D V + + + AC + L G ++H SG DLP NA++ +Y+
Sbjct: 579 FRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
+CG ++ + FE+ D+++ WNAL+SG
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIA-------------------------------WNALVSG 666
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
Q+ E A+ + M G+ N T S + S +N++ GK+VHA + YD
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
V A+I YAK G I A + F + +++ V W AII AY+ HG S AL + QM+
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
S ++P+ VTL VL+AC+H GLVD+ F +M+S+YG+ P E Y C+V +L+RAG LS
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 846
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
A +FI EMPI+P A W LL+ V+ ++E G+FA HL E+EPE S Y++++NLY+
Sbjct: 847 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
+ +W+ R++M+E GV K G SWIE+ + +F D ++ +DEI+ Y + L
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966
Query: 541 MMREEGYI 548
E GY+
Sbjct: 967 RASEIGYV 974
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 213/456 (46%), Gaps = 44/456 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ S N + LF GI P + +SVL A + ++ H VL+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA--CKKIESLEIGEQLHGLVLK 316
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +D +V NALV+ Y G + A +F M +RD V++N++I G SQCG+ E+ L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M + + PD T+ S++ AC L G ++H + + G + + A++ +YA
Sbjct: 377 FKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC ++ A + F E ++ V + ++ +AYG + R+ FR
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVML---VAYGLLDDLRNSFR---------------- 476
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ R+MQ + PN T S + +L G+++H+ I+ + N
Sbjct: 477 ------------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
YV + +ID YAKLG + A + + + +V WT +I Y + AL + QMLD
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK---YGIQPLVEQYACMVGVLSRAG 417
GI+ D+V LT ++ACA GL +A K +H++ G + +V + SR G
Sbjct: 585 RGIRSDEVGLTNAVSACA--GL--QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 418 KLSEAAKFISEMPIEPSAK-AWGALLNGASVYGDVE 452
K+ E+ +++ E AW AL++G G+ E
Sbjct: 641 KIEES--YLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 200/408 (49%), Gaps = 38/408 (9%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
LF V ++P+ T + VL+A S ++ V++ H +L +GL V N L+
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y R G + LAR+VFDG+ +D SW +MI G S+ E RL+ +M +G ++P
Sbjct: 232 YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG-IMPTPYA 290
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
SV+ AC + + L +G ++HG V + G D +CNA++++Y G+L A +F MS
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
++D V+Y ++I+G G+ KA ++F+ M LD
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMH---LD------------------------ 383
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
GL+P++ TLAS + S L G+++HAY + + N + A+++ YAK
Sbjct: 384 ----GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
I A F + ++V+W ++ AY D + ++ QM I P+Q T ++L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC--MVGVLSRAGKLSEA 422
C G ++ +I + + K Q + Y C ++ + ++ GKL A
Sbjct: 500 CIRLGDLELGEQIHSQI-IKTNFQ--LNAYVCSVLIDMYAKLGKLDTA 544
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 200/475 (42%), Gaps = 70/475 (14%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
+ GI P+ T+ +L+ + S + ++ H +L+ GL+++ + L Y G+
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEG-RKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ A KVFD MPER +WN MI + E L++ M+S +V P+ T V++
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLE 194
Query: 143 AC-GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV 201
AC G S + ++H + G+ +CN +I +Y++ G +D AR +F+ + KD
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
S W A+ISG+ +N AI L +M G
Sbjct: 255 S-------------------------------WVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
+ P +S + +L G+++H ++ + + YV A++ Y LG + A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
+F R V + +I + G A+ L+ +M G++PD TL +++ AC+
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD- 402
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGAL 441
G L R +L + +++ + K GAL
Sbjct: 403 -----------------------------GTLFRGQQLH---AYTTKLGFASNNKIEGAL 430
Query: 442 LNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRME 496
LN + D+ET A D+ E E E+ + +M Y + R+ ++M+
Sbjct: 431 LNLYAKCADIET---ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 254 VREMQGSGLKPNAVTLASTIP-LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
+ ++ G++PN TL + +L G+++H+ ++ D N ++ + D Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
G ++GA +VFD+ R++ W +I A+ GL+ +M+ + P++ T +
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC---MVGVLSRAGKLSEAAKFISEM 429
VL AC + A+ + +H++ Q L + ++ + SR G + A + +
Sbjct: 192 VLEACRGGSV---AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 430 PIEPSAKAWGALLNGASVYG-DVETGKFACD 459
++ + +W A+++G S + E + CD
Sbjct: 249 RLKDHS-SWVAMISGLSKNECEAEAIRLFCD 278
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 297/546 (54%), Gaps = 20/546 (3%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG-LETDIFVENALVT 75
L++S + +SPD T ++KA S+ VK+ HC ++ G L ++ N+LV
Sbjct: 120 LYSSMIRHRVSPDRQTFLYLMKAS-----SFLSEVKQIHCHIIVSGCLSLGNYLWNSLVK 174
Query: 76 CYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGV 135
Y G G+A KVF MP D S+N MI GY++ GF E +LY +M+S G + PD
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG-IEPDEY 233
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESG--IEVDLPLCNAVIAMYAKCGSLDYARELFE 193
T++S++ CG D+ LG VHG++ G +L L NA++ MY KC A+ F+
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFD 293
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI-D 252
M +KD S+ +++ G++ G + A+ VF M L +WN+L+ G + + + +
Sbjct: 294 AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRE 353
Query: 253 LVREMQ-GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
L EM +KP+ VT+ S I + L G+ VH IR + ++++A+ID Y
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
K G I A VF A + + +WT++IT A HG+ AL L+ +M + G+ P+ VTL
Sbjct: 414 CKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI-SEMP 430
AVLTAC+HSGLV+E +FN M K+G P E Y +V +L RAG++ EA + +MP
Sbjct: 474 AVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMP 533
Query: 431 IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASR 490
+ PS WG++L+ D+ET + A L ++EPE G Y++++N+Y+ GRW + +
Sbjct: 534 MRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDK 593
Query: 491 VRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNE-RSDEIYTYLEGLFCMMREEGYIL 549
R+ ME GV K G S + L F+A + N R EI L+ L+ M+
Sbjct: 594 TREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK------ 647
Query: 550 QEELDC 555
+LDC
Sbjct: 648 -PKLDC 652
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 41/327 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ Y+ G L L+ V GI PD +TV S+L + S + K H ++ R
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL--VCCGHLSDIRLGKGVHGWIER 260
Query: 61 RG--LETDIFVENALVTCYCRCGEIGLARK------------------------------ 88
RG +++ + NAL+ Y +C E GLA++
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 89 -VFDGMPERDTVSWNSMIGGYSQCGFYEECKR-LYMEMLSVGSVVPDGVTIVSVMQACGQ 146
VFD MP+RD VSWNS++ GYS+ G + R L+ EM V V PD VT+VS++
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
+ +L G VHG V ++ D L +A+I MY KCG ++ A +F+ +EKD + S+
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSM 440
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWN----ALISGMVQNNWFEGAIDLVREMQGS-G 261
I+G +G +A +F M+ G+ N A+++ + E + + M+ G
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFG 500
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEV 288
P S + L + K++
Sbjct: 501 FDPETEHYGSLVDLLCRAGRVEEAKDI 527
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 289/549 (52%), Gaps = 39/549 (7%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G R + F V +G D FT++SV A A K+ H + +R GL D
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE--LENLSLGKQLHSWAIRSGLVDD-- 303
Query: 69 VENALVTCYCRC---GEIGLARKVFDGMPERDTVSWNSMIGGY-SQCGFYEECKRLYMEM 124
VE +LV Y +C G + RKVFD M + +SW ++I GY C E L+ EM
Sbjct: 304 VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
++ G V P+ T S +ACG D +G +V G + G+ + + N+VI+M+ K
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
++ A+ FE +SEK+ VSY N + G +N
Sbjct: 424 MEDAQRAFESLSEKNLVSY-------------------------------NTFLDGTCRN 452
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
FE A L+ E+ L +A T AS + + ++R G+++H+ ++ N V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
A+I Y+K G I A +VF+ +R+++ WT++IT +A HG A L + QM++ G++
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
P++VT A+L+AC+H GLV E W+ FN+M+ + I+P +E YACMV +L RAG L++A +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 425 FISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGR 484
FI+ MP + W L V+ + E GK A + E++P YI ++N+Y+CAG+
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGK 692
Query: 485 WEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMRE 544
WEE++ +R++M+E + K G SWIE+ ++ F D ++ + +IY L+ L ++
Sbjct: 693 WEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Query: 545 EGYILQEEL 553
GY+ +L
Sbjct: 753 CGYVPDTDL 761
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 252/547 (46%), Gaps = 99/547 (18%)
Query: 15 LDLFASSVDAGISP-DSFTVTSVLKA-IASPSFSYYKPVKEAHCFVLRRGLETDIFVENA 72
LDL A GI P DS T +S+LK+ I + F K V H ++ +E D + N+
Sbjct: 49 LDLMARD---GIRPMDSVTFSSLLKSCIRARDFRLGKLV---HARLIEFDIEPDSVLYNS 102
Query: 73 LVTCYCRCGEIGLARKVFDGMP---ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
L++ Y + G+ A VF+ M +RD VSW++M+ Y G + ++++E L +G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG- 161
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG-IEVDLPLCNAVIAMYAKC-GSLDY 187
+VP+ +V++AC S + +G GF+ ++G E D+ + ++I M+ K S +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
A ++F++MSE + V TW +I+ +Q +
Sbjct: 222 AYKVFDKMSELNVV-------------------------------TWTLMITRCMQMGFP 250
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
AI +M SG + + TL+S + NL GK++H++AIR + V ++
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 308 IDTYAKL---GFIHGARQVFDQARSRSLVIWTAIITAYAAHGD-ASLALGLYAQMLDSG- 362
+D YAK G + R+VFD+ S++ WTA+IT Y + + A+ A+ L+++M+ G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 363 IQPDQVTLTAVLTACAH-------SGLVDEAWK--------IFNTMHSKY---------- 397
++P+ T ++ AC + ++ +A+K + N++ S +
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 398 -GIQPLVEQ----YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYG 449
+ L E+ Y + R +A K +SE+ + SA + +LL+G + G
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 450 DVETGKFACDHLFEI-----EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIR 504
+ G+ + ++ +P + + ++YS G + ASRV ME V
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNA----LISMYSKCGSIDTASRVFNFMENRNV---- 540
Query: 505 GSSWIEM 511
SW M
Sbjct: 541 -ISWTSM 546
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 298/567 (52%), Gaps = 67/567 (11%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L L+ + G+ P+S+T VLK+ A +K ++ H VL+ G + D++V +L+
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFVLKSCAKSK--AFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVS-------------------------------WNS 103
+ Y + G + A KVFD P RD VS WN+
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 104 MIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES 163
MI GY++ G Y+E L+ +M+ +V PD T+V+V+ AC QS + LG +VH ++++
Sbjct: 237 MISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 164 GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVF 223
G +L + NA+I +Y+KCG L+ A LFE + KD +S
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS--------------------- 334
Query: 224 RGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
WN LI G N ++ A+ L +EM SG PN VT+ S +P ++ +
Sbjct: 335 ----------WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 284 GGKEVHAYAIRRC--YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
G+ +H Y +R + T++ID YAK G I A QVF+ +SL W A+I
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+A HG A + L+++M GIQPD +T +L+AC+HSG++D IF TM Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+E Y CM+ +L +G EA + I+ M +EP W +LL ++G+VE G+ ++L
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 462 FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAK 521
+IEPE+ G+Y++++N+Y+ AGRW E ++ R + + G+ K+ G S IE+ + FI
Sbjct: 565 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 522 DVSNERSDEIYTYLEGLFCMMREEGYI 548
D + R+ EIY LE + ++ + G++
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAGFV 651
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 198/365 (54%), Gaps = 3/365 (0%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
A VF + E + + WN+M G++ +LY+ M+S+G ++P+ T V+++C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLKSCA 145
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+SK G ++HG V + G ++DL + ++I+MY + G L+ A ++F++ +D VSY +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+I GY + G++ A+ +F + + +WNA+ISG + ++ A++L ++M + ++P+
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
T+ + + + ++ G++VH + + N+ + A+ID Y+K G + A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ + ++ W +I Y AL L+ +ML SG P+ VT+ ++L ACAH G +D
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 386 AWKIFNTMHSKY-GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
I + + G+ ++ + ++ G + EAA + + S +W A++ G
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI-EAAHQVFNSILHKSLSSWNAMIFG 444
Query: 445 ASVYG 449
+++G
Sbjct: 445 FAMHG 449
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 137/259 (52%), Gaps = 5/259 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ G Y+ L+LF + + PD T+ +V+ A A + ++ H ++
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS--GSIELGRQVHLWIDD 294
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +++ + NAL+ Y +CGE+ A +F+ +P +D +SWN++IGGY+ Y+E L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE--SGIEVDLPLCNAVIAM 178
+ EML G P+ VT++S++ AC + +G +H ++++ G+ L ++I M
Sbjct: 355 FQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
YAKCG ++ A ++F + K S+ ++I G+ +G + D+F M G+ +
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 239 SGMVQNNWFEGAIDLVREM 257
G++ G +DL R +
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 304/593 (51%), Gaps = 82/593 (13%)
Query: 4 AYSFNGLYRHLLDLFASSVDA-GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG 62
+Y+ G + L++F+ + G PD+ T+ +VL AS + K+ HCF +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS--LGTHSLGKQLHCFAVTSE 259
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLY- 121
+ ++FV N LV Y +CG + A VF M +D VSWN+M+ GYSQ G +E+ RL+
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 122 ----------------------------------MEMLSVGSVVPDGVTIVSVMQACGQS 147
+MLS G + P+ VT++SV+ C
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASV 378
Query: 148 KDLVLGMEVHGFVNESGIEV-------DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
L+ G E+H + + I++ + + N +I MYAKC +D AR +F+ +S K+
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE- 437
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM--Q 258
RDV TW +I G Q+ A++L+ EM +
Sbjct: 438 -------------------RDVV---------TWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN---IYVATAIIDTYAKLG 315
+PNA T++ + + + LR GK++HAYA+R QN ++V+ +ID YAK G
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCG 527
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
I AR VFD +++ V WT+++T Y HG ALG++ +M G + D VTL VL
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
AC+HSG++D+ + FN M + +G+ P E YAC+V +L RAG+L+ A + I EMP+EP
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 436 KAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
W A L+ ++G VE G++A + + E+ G+Y +++NLY+ AGRW++ +R+R M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 496 EEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
GV K G SW+E F D ++ + EIY L +++ GY+
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 253/517 (48%), Gaps = 25/517 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ +Y NG L LF +PD++T V KA S + + AH L
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE--ISSVRCGESAHALSLV 155
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +++FV NALV Y RC + ARKVFD M D VSWNS+I Y++ G + +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M + PD +T+V+V+ C LG ++H F S + ++ + N ++ MYA
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNA 236
KCG +D A +F MS KD VS+ ++++GY G A +F M+ + TW+A
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
ISG Q A+ + R+M SG+KPN VTL S + + L GKE+H YAI+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 297 Y--------DQNIYVATAIIDTYAKLGFIHGARQVFD--QARSRSLVIWTAIITAYAAHG 346
D+N+ V +ID YAK + AR +FD + R +V WT +I Y+ HG
Sbjct: 396 IDLRKNGHGDENM-VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 347 DASLALGLYAQMLDSGIQ--PDQVTLTAVLTACAHSGLVDEAWKIFN-TMHSKYGIQPLV 403
DA+ AL L ++M + Q P+ T++ L ACA + +I + ++ PL
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
C++ + ++ G +S+A M + + W +L+ G ++G E D +
Sbjct: 515 VS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 464 IEPESSGNYIIMANLYSC--AGRWEEASRVRKRMEEI 498
I + G +++ LY+C +G ++ RM+ +
Sbjct: 573 IGFKLDGVTLLVV-LYACSHSGMIDQGMEYFNRMKTV 608
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 206 IISGYMAYGFVVKARDVFRGM--ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
+IS Y++ G + A + R + G+ WN+LI N + L M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
P+ T S++R G+ HA ++ + N++V A++ Y++ + AR+V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS-GIQPDQVTLTAVLTACAHSGL 382
FD+ +V W +II +YA G +AL ++++M + G +PD +TL VL CA G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 383 VDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALL 442
++ + IQ + C+V + ++ G + EA S M ++ +W A++
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 443 NGASVYGDVE 452
G S G E
Sbjct: 303 AGYSQIGRFE 312
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 313/582 (53%), Gaps = 47/582 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+++ Y NG + LF+ G+ P TV++ L A S + + K++H +
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA--SANMGGVEEGKQSHAIAIV 302
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G+E D + +L+ YC+ G I A VFD M E+D V+WN +I GY Q G E+ +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA--I 360
Query: 121 YM-EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
YM +++ + + D VT+ ++M A ++++L LG EV + E D+ L + V+ MY
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGF------------------------ 215
AKCGS+ A+++F+ EKD + + ++++ Y G
Sbjct: 421 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN 480
Query: 216 -----------VVKARDVFRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
V +A+D+F M++ P L +W +++GMVQN E AI +R+MQ S
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN-IYVATAIIDTYAKLGFIHG 319
GL+PNA ++ + ++ ++L G+ +H Y IR + + + T+++D YAK G I+
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
A +VF L + A+I+AYA +G+ A+ LY + G++PD +T+T VL+AC H
Sbjct: 601 AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH 660
Query: 380 SGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWG 439
+G +++A +IF + SK ++P +E Y MV +L+ AG+ +A + I EMP +P A+
Sbjct: 661 AGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQ 720
Query: 440 ALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIG 499
+L+ + E + L E EPE+SGNY+ ++N Y+ G W+E ++R+ M+ G
Sbjct: 721 SLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKG 780
Query: 500 VHKIRGSSWIEMSGR--LIAFIAKDVSNERSDEIYTYLEGLF 539
+ K G SWI+++G + F+A D ++ R +EI L L
Sbjct: 781 LKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 34/331 (10%)
Query: 52 KEAHCFVLRRG--LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS 109
K+ H +L+ G + ++E LV Y +C + +A +F + R+ SW ++IG
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
+ G E ++EML + PD + +V +ACG K G VHG+V +SG+E +
Sbjct: 150 RIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
+ +++ MY KCG LD A ++F+E+ +++ V++ +++ GY
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY------------------- 249
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
VQN E AI L +M+ G++P VT+++ + + + GK+ H
Sbjct: 250 ------------VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
A AI + + + T++++ Y K+G I A VFD+ + +V W II+ Y G
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE 357
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
A+ + M ++ D VTL +++A A +
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAART 388
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 59/360 (16%)
Query: 140 VMQACGQSKDLVLGMEVHGFVNESG--------IEVDLPLCNAVIAMYAKCGSLDYAREL 191
++Q C +DL G ++H + ++G IE L + YAKC +L+ A L
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKL------VIFYAKCDALEIAEVL 129
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F ++ + R+VF +W A+I + EGA+
Sbjct: 130 FSKL----------------------RVRNVF---------SWAAIIGVKCRIGLCEGAL 158
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
EM + + P+ + + R G+ VH Y ++ + ++VA+++ D Y
Sbjct: 159 MGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY 218
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
K G + A +VFD+ R+ V W A++ Y +G A+ L++ M G++P +VT++
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 372 AVLTACAHSGLVDE-----AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI 426
L+A A+ G V+E A I N M + + + C VG++ E A+ +
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI-------EYAEMV 331
Query: 427 SEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
+ E W +++G G VE + C L +E + + + +A L S A R E
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLE-KLKYDCVTLATLMSAAARTE 389
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 271/494 (54%), Gaps = 33/494 (6%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H +L+ DI + N L+ Y +CG + ARKVF+ MP+RD V+W ++I GYSQ
Sbjct: 83 HAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+ + +ML G P+ T+ SV++A + G ++HGF + G + ++ + +A
Sbjct: 143 CDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
++ +Y + YG + A+ VF +E+ +W
Sbjct: 202 LLDLYTR-------------------------------YGLMDDAQLVFDALESRNDVSW 230
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
NALI+G + + E A++L + M G +P+ + AS S L GK VHAY I+
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
+ ++D YAK G IH AR++FD+ R +V W +++TAYA HG A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ +M GI+P++++ +VLTAC+HSGL+DE W + M K GI P Y +V +L
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLG 409
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYII 474
RAG L+ A +FI EMPIEP+A W ALLN ++ + E G +A +H+FE++P+ G ++I
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 475 MANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTY 534
+ N+Y+ GRW +A+RVRK+M+E GV K SW+E+ + F+A D + + +EI
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 535 LEGLFCMMREEGYI 548
E + ++E GY+
Sbjct: 530 WEEVLAKIKELGYV 543
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 38/325 (11%)
Query: 128 GSVVP-DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
GS +P D ++++ C K L+ G VH + +S D+ + N ++ MYAKCGSL+
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
AR++FE+M ++D V++ ++ISGY Q++
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGY-------------------------------SQHDR 141
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG--GKEVHAYAIRRCYDQNIYVA 304
A+ +M G PN TL+S I + + RG G ++H + ++ +D N++V
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
+A++D Y + G + A+ VFD SR+ V W A+I +A AL L+ ML G +
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
P + ++ AC+ +G +++ K + K G + + ++ + +++G + +A K
Sbjct: 260 PSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 425 FISEMPIEPSAKAWGALLNGASVYG 449
+ + +W +LL + +G
Sbjct: 319 IFDRLA-KRDVVSWNSLLTAYAQHG 342
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 37/368 (10%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L F + G SP+ FT++SV+KA A+ + H F ++ G ++++ V +AL+
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG--HQLHGFCVKCGFDSNVHVGSALL 203
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y R G + A+ VFD + R+ VSWN++I G+++ E+ L+ ML G P
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-FRPSH 262
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
+ S+ AC + L G VH ++ +SG ++ N ++ MYAK GS+ AR++F+
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
++++D VS+ S+++ Y +GF +A W WFE
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEA-------------VW-----------WFE------ 352
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
EM+ G++PN ++ S + S+ L G + + + ++D +
Sbjct: 353 -EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 315 GFIHGA-RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G ++ A R + + + IW A++ A H + LG YA + PD +
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAAEHVFELDPDDPGPHVI 469
Query: 374 LTACAHSG 381
L SG
Sbjct: 470 LYNIYASG 477
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 52/288 (18%)
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+++GS + + + + + F L G+ VHA+ ++ + +I + +++ YAK G
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
+ AR+VF++ R V WT +I+ Y+ H AL + QML G P++ TL++V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 376 A--------CAHS---------------------------GLVDEAWKIFNTMHSKYGIQ 400
A C H GL+D+A +F+ + S+
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-- 227
Query: 401 PLVEQYACMVGVLSRAG--KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
V A + G R+G K E + + PS ++ +L S G +E GK+
Sbjct: 228 --VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV- 284
Query: 459 DHLFEIEPESSGNYII------MANLYSCAGRWEEASRVRKRMEEIGV 500
H + I+ SG ++ + ++Y+ +G +A ++ R+ + V
Sbjct: 285 -HAYMIK---SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 278/501 (55%), Gaps = 6/501 (1%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
KP+ C V + +++ N +V+ Y + G + AR VFD MPERD VSWN+M+ GY
Sbjct: 97 KPIDA--CKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGY 154
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
+Q G E Y E G + + + ++ AC +S+ L L + HG V +G +
Sbjct: 155 AQDGNLHEALWFYKEFRRSG-IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN 228
+ L ++I YAKCG ++ A+ F+EM+ KD + ++ISGY G + A +F M
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE 273
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
+W ALI+G V+ A+DL R+M G+KP T +S + + ++LR GKE+
Sbjct: 274 KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGD 347
H Y IR N V +++ID Y+K G + + +VF + V W +I+A A HG
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL 393
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
AL + M+ +QP++ TL +L AC+HSGLV+E + F +M ++GI P E YA
Sbjct: 394 GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA 453
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
C++ +L RAG E + I EMP EP W A+L ++G+ E GK A D L +++PE
Sbjct: 454 CLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPE 513
Query: 468 SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVS--N 525
SS YI+++++Y+ G+WE ++R M++ V+K + SWIE+ ++ AF D S +
Sbjct: 514 SSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAH 573
Query: 526 ERSDEIYTYLEGLFCMMREEG 546
R +EIY L L ++ EE
Sbjct: 574 ARKEEIYFILHNLAAVIEEEA 594
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 182/388 (46%), Gaps = 36/388 (9%)
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIE-VDLPLCNAVIAMYAKCGSLDYARELFEEM 195
+ S++Q CG +K L G +H + +G + + L N +I MY KCG A ++F++M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 196 SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVR 255
++ S+ +++SGY+ G +V+AR VF M + +WN ++ G Q+ A+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH--------------------AYA--- 292
E + SG+K N + A + L+ ++ H AYA
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 293 ----IRRCYDQ----NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
+RC+D+ +I++ T +I YAKLG + A ++F + ++ V WTA+I Y
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
G + AL L+ +M+ G++P+Q T ++ L A A + +I M + ++P
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAI 347
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL--F 462
+ ++ + S++G L + + + W +++ + +G D + F
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 463 EIEPESSGNYIIMANLYSCAGRWEEASR 490
++P + +++ N S +G EE R
Sbjct: 408 RVQPNRT-TLVVILNACSHSGLVEEGLR 434
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 155/384 (40%), Gaps = 68/384 (17%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+I Y+ +G L + +GI + F+ +L A + ++AH VL
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR--QLQLNRQAHGQVLV 207
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +++ + +++ Y +CG++ A++ FD M +D W ++I GY++ G E ++L
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 121 YMEM---------------LSVGS---------------VVPDGVTIVSVMQACGQSKDL 150
+ EM + GS V P+ T S + A L
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 151 VLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY 210
G E+HG++ + + + + +++I MY+K GSL+ + +F +K D +
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF------- 380
Query: 211 MAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLA 270
WN +IS + Q+ A+ ++ +M ++PN TL
Sbjct: 381 -----------------------WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 271 STIPLFSYFSNLRGG-KEVHAYAIRR--CYDQNIYVATAIIDTYAKLG-FIHGARQVFDQ 326
+ S+ + G + + ++ DQ Y +ID + G F R++ +
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY--ACLIDLLGRAGCFKELMRKIEEM 475
Query: 327 ARSRSLVIWTAIITAYAAHGDASL 350
IW AI+ HG+ L
Sbjct: 476 PFEPDKHIWNAILGVCRIHGNEEL 499
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 293/555 (52%), Gaps = 44/555 (7%)
Query: 6 SFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV--KEAHCFVLRRGL 63
++ L+ + L+ S + +G SPD+F+ +LK+ AS S PV ++ HC V + G
Sbjct: 29 AYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSL----PVSGQQLHCHVTKGGC 84
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERD--TVSWNSMIGGYSQCGFYEECKRLY 121
ET+ FV AL++ YC+CG + ARKVF+ P+ +V +N++I GY+ + ++
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
M G V D VT++ ++ C + L LG +HG + G++ ++ + N+ I MY K
Sbjct: 145 RRMKETGVSV-DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 182 CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGM 241
CGS++ R +F M GL TWNA+ISG
Sbjct: 204 CGSVE-------------------------------AGRRLFDEMPVKGLITWNAVISGY 232
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
QN ++L +M+ SG+ P+ TL S + ++ + G EV + N+
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
+V+ A I YA+ G + AR VFD +SLV WTA+I Y HG + L L+ M+
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 362 GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE 421
GI+PD VL+AC+HSGL D+ ++F M +Y ++P E Y+C+V +L RAG+L E
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 422 AAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSC 481
A +FI MP+EP WGALL ++ +V+ + A + E EP + G Y++M+N+YS
Sbjct: 413 AMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSD 472
Query: 482 AGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCM 541
+ E R+R M E K G S++E GR+ F+A D S+E+++E++ L+ L
Sbjct: 473 SKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETS 532
Query: 542 MREEGYILQEELDCE 556
+ E L +DC+
Sbjct: 533 VME----LAGNMDCD 543
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 100/205 (48%), Gaps = 5/205 (2%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
YS NGL +L+L+ +G+ PD FT+ SVL + A K E V G
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA--HLGAKKIGHEVGKLVESNGFV 289
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
++FV NA ++ Y RCG + AR VFD MP + VSW +MIG Y G E L+ +M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAMYAKCG 183
+ G + PDG V V+ AC S G+E+ E +E + ++ + + G
Sbjct: 350 IKRG-IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 184 SLDYARELFEEMS-EKDDVSYGSII 207
LD A E E M E D +G+++
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALL 433
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 10/221 (4%)
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
WN + + + F +I L R M SG P+A + + + S G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ--ARSRSLVIWTAIITAYAAHGDASLA 351
+ + +V TA+I Y K G + AR+VF++ S+ V + A+I+ Y A+ + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQYAC 408
++ +M ++G+ D VT+ ++ C V E + ++H K G+ V
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT----VPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+ + + G + + EMP++ W A+++G S G
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNG 236
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 273/528 (51%), Gaps = 62/528 (11%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K+ H + G I + N L+ Y +CG + ARKVFD MP RD SWN M+ GY++
Sbjct: 105 KKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV 164
Query: 112 GFYEECKRLYMEM----------LSVGSVVPD----GVTIVSVMQACGQSKDLVL----- 152
G EE ++L+ EM + G V D + + S+MQ S+ +
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 153 ------------GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
G E+HG + +G++ D L ++++ MY KCG +D AR +F+++ EKD
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
VS+ S+I Y + W EG L E+ GS
Sbjct: 285 VSWTSMIDRYFK------------------------------SSRWREG-FSLFSELVGS 313
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
+PN T A + + + GK+VH Y R +D + +++++D Y K G I A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+ V D LV WT++I A +G AL + +L SG +PD VT VL+AC H+
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
GLV++ + F ++ K+ + + Y C+V +L+R+G+ + ISEMP++PS W +
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 441 LLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
+L G S YG+++ + A LF+IEPE+ Y+ MAN+Y+ AG+WEE ++RKRM+EIGV
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 501 HKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
K GSSW E+ + FIA D S+ ++I +L L M+EEGY+
Sbjct: 554 TKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 166/319 (52%), Gaps = 3/319 (0%)
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P T +++Q C Q++ L G +VH + SG + + N ++ MYAKCGSL AR++
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F+EM +D S+ +++GY G + +AR +F M +W A+++G V+ + E A+
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 252 DLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
L MQ +PN T++ + + +R GKE+H + +R D + + ++++D
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
Y K G I AR +FD+ + +V WT++I Y L+++++ S +P++ T
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
VL ACA +E K + ++ G P + +V + ++ G + E+AK + +
Sbjct: 323 AGVLNACA-DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI-ESAKHVVDGC 380
Query: 431 IEPSAKAWGALLNGASVYG 449
+P +W +L+ G + G
Sbjct: 381 PKPDLVSWTSLIGGCAQNG 399
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 23/274 (8%)
Query: 228 NPGLDTWNALISGMVQNNWFEGAID------LVRE---MQGSGLKPNAVTLASTIPLFSY 278
NP + ++ + + N F AID L+RE + G KP A T + I + S
Sbjct: 38 NPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQ 97
Query: 279 FSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI 338
L GK+VH + + I + ++ YAK G + AR+VFD+ +R L W +
Sbjct: 98 TRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVM 157
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
+ YA G A L+ +M + D + TA++T +EA +++ M
Sbjct: 158 VNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPN 213
Query: 399 IQPLVEQYACMVGVLS-----RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVET 453
+P + + V + R GK E I ++ W +L++ G ++
Sbjct: 214 SRPNIFTVSIAVAAAAAVKCIRRGK--EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 454 GKFACDHLFEIEPESSGNYIIMANLYSCAGRWEE 487
+ D + E + S + M + Y + RW E
Sbjct: 272 ARNIFDKIVEKDVVS---WTSMIDRYFKSSRWRE 302
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 303/547 (55%), Gaps = 8/547 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML + + + +L LF G+ PD+FT+ VLK+I ++ H + ++
Sbjct: 17 MLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGR--LRKVIEGEKVHGYAVK 74
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLE D +V N+L+ Y G+I + KVFD MP+RD VSWN +I Y G +E+ +
Sbjct: 75 AGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGV 134
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M ++ D TIVS + AC K+L +G ++ FV + E+ + + NA++ M+
Sbjct: 135 FKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFC 193
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG LD AR +F+ M +K+ + S++ GY++ G + +AR +F + W A+++G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
VQ N F+ A++L R MQ +G++P+ L S + + L GK +H Y +
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
V TA++D YAK G I A +VF + + R WT++I A +G + AL LY +M +
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
G++ D +T AVLTAC H G V E KIF++M ++ +QP E +C++ +L RAG L
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 421 EAAKFISEMPIEPS---AKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMAN 477
EA + I +M E + +LL+ A YG+V+ + + L ++E S + ++A+
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493
Query: 478 LYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKD--VSNERSDEIYTYL 535
+Y+ A RWE+ + VR++M+++G+ K G S IE+ G FI D +S+ + DEI + L
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Query: 536 EGLFCMM 542
+M
Sbjct: 554 HQTTNLM 560
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 50/330 (15%)
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
++ P L +N ++ + F + L E++G GL P+ TL + + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
++VH YA++ + + YV+ +++ YA LG I +VFD+ R +V W +I++Y +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 346 GDASLALGLYAQM-LDSGIQPDQVTLTAVLTACA-------------------------- 378
G A+G++ +M +S ++ D+ T+ + L+AC+
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 379 --------HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
G +D+A +F++M K V+ + MV G++ EA P
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKN-----VKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 431 IEPSAKAWGALLNGASVYG--DVETGKFACDHLFEIEPESSGNYIIMANLYSCA--GRWE 486
++ W A++NG + D F C I P+ N+++++ L CA G E
Sbjct: 241 VKDVV-LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD---NFVLVSLLTGCAQTGALE 296
Query: 487 EASRVRKRMEE--IGVHKIRGSSWIEMSGR 514
+ + + E + V K+ G++ ++M +
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAK 326
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 282/532 (53%), Gaps = 35/532 (6%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
+F ++D PD TV+SVL+A K + ++L+ G + V N L+
Sbjct: 295 MFLENLDQ-FKPDLLTVSSVLRACGH--LRDLSLAKYIYNYMLKAGFVLESTVRNILIDV 351
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y +CG++ AR VF+ M +DTVSWNS+I GY Q G E +L+ +M+ + D +T
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHIT 410
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
+ ++ + DL G +H +SGI +DL + NA+I MYAKCG + + ++F M
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
D V TWN +IS V+ F + + +
Sbjct: 471 TGDTV-------------------------------TWNTVISACVRFGDFATGLQVTTQ 499
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M+ S + P+ T T+P+ + + R GKE+H +R Y+ + + A+I+ Y+K G
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
+ + +VF++ R +V WT +I AY +G+ AL +A M SGI PD V A++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
C+HSGLVDE F M + Y I P++E YAC+V +LSR+ K+S+A +FI MPI+P A
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 437 AWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRME 496
W ++L GD+ET + + E+ P+ G I+ +N Y+ +W++ S +RK ++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 497 EIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
+ + K G SWIE+ + F + D S +S+ IY LE L+ +M +EGYI
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 791
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 220/454 (48%), Gaps = 43/454 (9%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
A+S NGL+ L+ + ++ +SPD +T SV+KA A + + +L G
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ--ILDMGF 137
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E+D+FV NALV Y R G + AR+VFD MP RD VSWNS+I GYS G+YEE +Y E
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
L +VPD T+ SV+ A G + G +HGF +SG+ + + N ++AMY K
Sbjct: 198 -LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
AR +F+EM +D VSY ++I GY+ V ++ +F +EN LD +
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LEN--LDQF--------- 303
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
KP+ +T++S + + +L K ++ Y ++ + V
Sbjct: 304 -------------------KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
+ID YAK G + AR VF+ + V W +II+ Y GD A+ L+ M+
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRAGKLS 420
Q D +T +++ L D K +HS K GI + ++ + ++ G++
Sbjct: 405 QADHITYLMLISVSTR--LAD--LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETG 454
++ K S M + W +++ +GD TG
Sbjct: 461 DSLKIFSSMGTGDTV-TWNTVISACVRFGDFATG 493
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 239/490 (48%), Gaps = 54/490 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA---HCF 57
++ YS +G Y L+++ ++ I PDSFTV+SVL P+F VK+ H F
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL-----PAFGNLLVVKQGQGLHGF 232
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
L+ G+ + + V N LV Y + AR+VFD M RD+VS+N+MI GY + EE
Sbjct: 233 ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES 292
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
R+++E L PD +T+ SV++ACG +DL L ++ ++ ++G ++ + N +I
Sbjct: 293 VRMFLENLD--QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
+YAKCG + AR++F M KD VS+ SIISGY+ G +++A +F+ M
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM----------- 399
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
++ E Q + +T I + + ++L+ GK +H+ I+
Sbjct: 400 ---------------MIMEEQA-----DHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
++ V+ A+ID YAK G + + ++F + V W +I+A GD + L + Q
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLS 414
M S + PD T L CA A ++ +H ++G + ++ ++ + S
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLA----AKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETG--KFACDHLFEIEPESSGNY 472
+ G L +++ M W ++ +YG+ E FA I P+S
Sbjct: 556 KCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS---V 611
Query: 473 IIMANLYSCA 482
+ +A +Y+C+
Sbjct: 612 VFIAIIYACS 621
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT--WNALISGMVQNNWFEGAIDLV 254
+ D G +I Y + + VFR + +P + WN++I +N F A++
Sbjct: 36 DSSDFFSGKLIDKYSHFREPASSLSVFRRV-SPAKNVYLWNSIIRAFSKNGLFPEALEFY 94
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
+++ S + P+ T S I + + G V+ + ++ +++V A++D Y+++
Sbjct: 95 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 154
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
G + ARQVFD+ R LV W ++I+ Y++HG AL +Y ++ +S I PD T+++VL
Sbjct: 155 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
Query: 375 TA 376
A
Sbjct: 215 PA 216
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 21/306 (6%)
Query: 26 ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGL 85
+ PD T L AS + + KE HC +LR G E+++ + NAL+ Y +CG +
Sbjct: 505 VVPDMATFLVTLPMCAS--LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
+ +VF+ M RD V+W MI Y G E+ + +M G +VPD V ++++ AC
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG-IVPDSVVFIAIIYACS 621
Query: 146 QSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS-Y 203
S + G+ I+ + V+ + ++ + A E + M K D S +
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIW 681
Query: 204 GSIISGYMAYGFVVKARDVFRGM--ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
S++ G + A V R + NP ++ L S + L+R+
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRK----S 737
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI---RRCYDQNIYVATAII-DTYAKLGFI 317
LK +T P +S+ + GK VH ++ + IY + I+ AK G+I
Sbjct: 738 LKDKHIT---KNPGYSW---IEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 791
Query: 318 HGARQV 323
R+V
Sbjct: 792 PDPREV 797
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 280 SNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAI 338
SNL + +HA I D + + + +ID Y+ + VF + + ++++ +W +I
Sbjct: 18 SNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSI 77
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD-EAWKIFNTMHSKY 397
I A++ +G AL Y ++ +S + PD+ T +V+ ACA GL D E +
Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAEMGDLVYEQILDM 135
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
G + + +V + SR G L+ A + EMP+ +W +L++G S +G
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV-SWNSLISGYSSHG 186
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 290/548 (52%), Gaps = 41/548 (7%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
DLF GI D + S LKA Y K+ HC ++ GL+ D+ ++L+
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG--KQVHCLSVKCGLDRDLHTGSSLI 571
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +CG I ARKVF +PE VS N++I GYSQ EE L+ EML+ G V P
Sbjct: 572 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG-VNPSE 629
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP-LCNAVIAMYAKCGSLDYARELFE 193
+T ++++AC + + L LG + HG + + G + L +++ MY + A LF
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
E+S S SI+ W ++SG QN ++E A+
Sbjct: 690 ELS-----SPKSIV-------------------------LWTGMMSGHSQNGFYEEALKF 719
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK 313
+EM+ G+ P+ T + + + S S+LR G+ +H+ +D + + +ID YAK
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 779
Query: 314 LGFIHGARQVFDQARSRSLVI-WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
G + G+ QVFD+ R RS V+ W ++I YA +G A AL ++ M S I PD++T
Sbjct: 780 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 839
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
VLTAC+H+G V + KIF M +YGI+ V+ ACMV +L R G L EA FI ++
Sbjct: 840 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 899
Query: 433 PSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVR 492
P A+ W +LL ++GD G+ + + L E+EP++S Y++++N+Y+ G WE+A+ +R
Sbjct: 900 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 959
Query: 493 KRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY----- 547
K M + GV K+ G SWI++ R F A D S+ +I +LE L+ +M+++
Sbjct: 960 KVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPDI 1019
Query: 548 ILQEELDC 555
+ Q LDC
Sbjct: 1020 VEQGSLDC 1027
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 201/440 (45%), Gaps = 40/440 (9%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K H L G++++ + NA+V Y +C ++ A K FD + E+D +WNSM+ YS
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G + R ++ + + P+ T V+ C + ++ G ++H + + G+E +
Sbjct: 139 GKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 172 CNAVIAMYAKCGSLDYARELFE-----------------------------------EMS 196
A++ MYAKC + AR +FE E
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
D +++ ++I+ Y+ G + AR +F M +P + WN +ISG + AI+
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M+ S +K TL S + +NL G VHA AI+ NIYV ++++ Y+K
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
+ A +VF+ ++ V W A+I YA +G++ + L+ M SG D T T++L+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
CA S ++ + + + K + L A +V + ++ G L +A + M +
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNA-LVDMYAKCGALEDARQIFERM-CDRDNV 495
Query: 437 AWGALLNGASVYGDVETGKF 456
W ++ G+ V + E+ F
Sbjct: 496 TWNTII-GSYVQDENESEAF 514
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 42/379 (11%)
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM---LSVG 128
++ Y R G++ AR +F M D V+WN MI G+ + G C+ + +E +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG----CETVAIEYFFNMRKS 321
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
SV T+ SV+ A G +L LG+ VH + G+ ++ + +++++MY+KC ++ A
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
++FE + EK+DV WNA+I G N
Sbjct: 382 AKVFEALEEKNDV-------------------------------FWNAMIRGYAHNGESH 410
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
++L +M+ SG + T S + + +L G + H+ I++ +N++V A++
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
D YAK G + ARQ+F++ R V W II +Y + S A L+ +M GI D
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 369 TLTAVLTACAH-SGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
L + L AC H GL K + + K G+ + + ++ + S+ G + +A K S
Sbjct: 531 CLASTLKACTHVHGLYQ--GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 428 EMPIEPSAKAWGALLNGAS 446
+P E S + AL+ G S
Sbjct: 589 SLP-EWSVVSMNALIAGYS 606
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 181/420 (43%), Gaps = 65/420 (15%)
Query: 85 LARKVFDG-MPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
L R+++ +P D + + QC ++ ++++ EM P + + +
Sbjct: 29 LGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKS-RKVFDEM-------PQRLALALRIGK 80
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
SK L+LG++ G L NA++ +YAKC + YA + F+ + EKD ++
Sbjct: 81 AVHSKSLILGIDSEG-----------RLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAW 128
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
S++S Y + G PG + +S + +N F
Sbjct: 129 NSMLSMYSSIG-------------KPG-KVLRSFVS-LFENQIF---------------- 157
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
PN T + + + +N+ G+++H I+ ++N Y A++D YAK I AR+V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV 383
F+ + V WT + + Y G A+ ++ +M D G +PD + V+ G +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 384 DEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGA 440
+A +F M S P V + M+ + G + A ++ M ++ + G+
Sbjct: 278 KDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 441 LLNGASVYGDVETGKFACDHLFEIEPESSGNYII---MANLYSCAGRWEEASRVRKRMEE 497
+L+ + +++ G H I+ + N + + ++YS + E A++V + +EE
Sbjct: 333 VLSAIGIVANLDLGLVV--HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 5/211 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +S NG Y L + G+ PD T +VL+ + S + + H +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV--LSSLREGRAIHSLIFH 760
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER-DTVSWNSMIGGYSQCGFYEECKR 119
+ D N L+ Y +CG++ + +VFD M R + VSWNS+I GY++ G+ E+ +
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAM 178
++ M ++PD +T + V+ AC + + G ++ + + GIE + ++ +
Sbjct: 821 IFDSMRQ-SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
+ G L A + E + K D S + G
Sbjct: 880 LGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 301/546 (55%), Gaps = 38/546 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L Y N L++ ++LF S G+ PD + +S+L + AS + + H + ++
Sbjct: 321 LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGT--QVHAYTIK 378
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF---YEEC 117
L D +V N+L+ Y +C + ARKVFD D V +N+MI GYS+ G E
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
++ +M + P +T VS+++A L L ++HG + + G+ +D+ +A+I
Sbjct: 439 LNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
+Y+ C L +R +F+EM KD L WN++
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKD-------------------------------LVIWNSM 526
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
+G VQ + E A++L E+Q S +P+ T A+ + ++++ G+E H ++R
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
+ N Y+ A++D YAK G A + FD A SR +V W ++I++YA HG+ AL + +
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
M+ GI+P+ +T VL+AC+H+GLV++ K F M ++GI+P E Y CMV +L RAG
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAG 705
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMAN 477
+L++A + I +MP +P+A W +LL+G + G+VE + A + +P+ SG++ +++N
Sbjct: 706 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 478 LYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEG 537
+Y+ G W EA +VR+RM+ GV K G SWI ++ + F++KD S+ ++++IY L+
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDD 825
Query: 538 LFCMMR 543
L +R
Sbjct: 826 LLVQIR 831
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 237/517 (45%), Gaps = 69/517 (13%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L LF ++ + PD + +++VL A + F + K+ H +LR GLE D + N L+
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPF--LEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +CG + A K+F+GMP ++ +SW +++ GY Q ++E L+ M G + PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDM 350
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
S++ +C L G +VH + ++ + D + N++I MYAKC L AR++F+
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
+ D V + ++I GY G W A+++
Sbjct: 411 FAAADVVLFNAMIEGYSRLG-----------------TQWE-----------LHEALNIF 442
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
R+M+ ++P+ +T S + + ++L K++H + + +I+ +A+ID Y+
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
+ +R VFD+ + + LVIW ++ Y + AL L+ ++ S +PD+ T ++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQ-------PLVEQYA-------------------- 407
TA + V + + F+ K G++ L++ YA
Sbjct: 563 TAAGNLASV-QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 408 -CMVGVLSRAGKLSEAAKFISEMP------IEPSAKAWGALLNGASVYGDVETG--KFAC 458
C V+S E K + + IEP+ + +L+ S G VE G +F
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 459 DHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
F IEPE+ +Y+ M +L AGR +A + ++M
Sbjct: 682 MLRFGIEPETE-HYVCMVSLLGRAGRLNKARELIEKM 717
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 172/347 (49%), Gaps = 39/347 (11%)
Query: 36 VLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPE 95
+L+ AS +Y+ V H ++ GLE D ++ N L+ Y R G + ARKVF+ MPE
Sbjct: 50 LLQLRASDDLLHYQNV--VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 96 RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC----GQSKDLV 151
R+ VSW++M+ + G YEE +++E P+ + S +QAC G+ + +V
Sbjct: 108 RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV 167
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
++ F+ +SG + D+ + +I Y K G++DYAR +F+ + EK V
Sbjct: 168 F--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV---------- 215
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
TW +ISG V+ ++ L ++ + P+ L++
Sbjct: 216 ---------------------TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
+ S L GGK++HA+ +R + + + +ID+Y K G + A ++F+ +++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
++ WT +++ Y + A+ L+ M G++PD +++LT+CA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 289/570 (50%), Gaps = 73/570 (12%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
++ H +VLR GLE+++ + N+L+ Y R G++ L+RKVF+ M +R+ SWNS++ Y++
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
Query: 112 GFYEECKRLYMEM----------------------------------LSVGSVVPDGVTI 137
G+ ++ L EM + + + P +I
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
S++QA + L LG +HG++ + + D+ + +I MY K G L YAR +F+ M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 198 K-----------------------------------DDVSYGSIISGYMAYGFVVKARDV 222
K D +++ S+ SGY G KA DV
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 223 FRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSY 278
M+ P + +W A+ SG +N F A+ + +MQ G+ PNA T+++ + +
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 279 FSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI 338
S L GKEVH + +R+ + YVATA++D Y K G + A ++F +++SL W +
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCM 468
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
+ YA G + ++ ML++G++PD +T T+VL+ C +SGLV E WK F+ M S+YG
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
I P +E +CMV +L R+G L EA FI M ++P A WGA L+ ++ D+E + A
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAW 588
Query: 459 DHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAF 518
L +EP +S NY++M NLYS RWE+ R+R M V SWI++ + F
Sbjct: 589 KRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIF 648
Query: 519 IAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
A+ ++ +IY L L M++ GY+
Sbjct: 649 YAEGKTHPDEGDIYFELYKLVSEMKKSGYV 678
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 220/423 (52%), Gaps = 20/423 (4%)
Query: 55 HCFVLRRGLE-TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF 113
H +++RGL+ +D V +A + Y RC +G A K+FD MP+RD ++WN ++ + G
Sbjct: 10 HGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGN 69
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+E+ L+ EM G+ D T+V ++Q C + G ++HG+V G+E ++ +CN
Sbjct: 70 WEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NP 229
++I MY++ G L+ +R++F M +++ S+ SI+S Y G+V A + ME P
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ TWN+L+SG + AI +++ MQ +GLKP+ +++S + + +L+ GK +H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
Y +R ++YV T +ID Y K G++ AR VFD ++++V W ++++ +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A L +M GI+PD +T ++ + A G ++A + M K G+ P V + +
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAI 367
Query: 410 VGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALL----------NGASVYGDVETGKF 456
S+ G A K +M E P+A LL +G V+G
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 457 ACD 459
CD
Sbjct: 428 ICD 430
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 286/520 (55%), Gaps = 36/520 (6%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
D T+T VL +P F K H + G + +I V N L+T Y +CG R
Sbjct: 154 DHATLTIVLSVCDTPEFCLV--TKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
VFDGM R+ ++ ++I G + +E+ RL+ ++ G V P+ VT +S + AC S+
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
+V G ++H + + GIE +L + +A++ MY+KCGS++ A +FE +E D+VS
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM----- 325
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
++ G+ QN E AI M +G++ +A
Sbjct: 326 --------------------------TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 269 LASTIPLFSYFSNLRG-GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
+++ + + S+ N G GK++H+ I+R + N +V +I+ Y+K G + ++ VF +
Sbjct: 360 VSAVLGV-SFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
R+ V W ++I A+A HG AL LY +M ++P VT ++L AC+H GL+D+
Sbjct: 419 PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGR 478
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
++ N M +GI+P E Y C++ +L RAG L EA FI +P++P K W ALL S
Sbjct: 479 ELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSF 538
Query: 448 YGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
+GD E G++A + LF+ P+SS +I++AN+YS G+W+E ++ KRM+ +GV K G S
Sbjct: 539 HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Query: 508 WIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
IE+ + +F+ +D + +++ IY L GLF +M +EGY
Sbjct: 599 SIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGY 638
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 170/388 (43%), Gaps = 45/388 (11%)
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
+ V N+L++ Y +CG++ A K+FD MP RD +S N + G+ + E L ML
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 127 VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
G D T+ V+ C + ++ +H SG + ++ + N +I Y KCG
Sbjct: 150 SGGF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC-- 205
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
V R VF GM + + T A+ISG+++N
Sbjct: 206 -----------------------------SVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
E + L M+ + PN+VT S + S + G+++HA + + + + +A
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
++D Y+K G I A +F+ V T I+ A +G A+ + +ML +G++ D
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHS-----KYGIQPLVEQYACMVGVLSRAGKLSE 421
++AVL +D + + +HS K+ V ++ + S+ G L++
Sbjct: 357 ANVVSAVLGV----SFIDNSLGLGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTD 410
Query: 422 AAKFISEMPIEPSAKAWGALLNGASVYG 449
+ MP + + +W +++ + +G
Sbjct: 411 SQTVFRRMP-KRNYVSWNSMIAAFARHG 437
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 162/380 (42%), Gaps = 58/380 (15%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
N L+ L LF+ + P+S T S L A + ++ H + + G+E+++
Sbjct: 234 NELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ--RIVEGQQIHALLWKYGIESEL 291
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+E+AL+ Y +CG I A +F+ E D VS ++ G +Q G EE + ++ ML
Sbjct: 292 CIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G V D + +V+ L LG ++H V + + + N +I MY+KCG L
Sbjct: 352 G-VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTD 410
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
++ +F M +++ VS+ S+I+ + +G GL
Sbjct: 411 SQTVFRRMPKRNYVSWNSMIAAFARHGH--------------GL---------------- 440
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG-------KEVHAYAIRRCYDQN 300
A+ L EM +KP VT S + S+ + G KEVH R +
Sbjct: 441 -AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH--- 496
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQML 359
T IID + G + A+ D + IW A++ A + HGD +G YA
Sbjct: 497 ---YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE--VGEYA--- 548
Query: 360 DSGIQPDQVTLTAVLTACAH 379
+Q+ TA ++ AH
Sbjct: 549 -----AEQLFQTAPDSSSAH 563
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSF--SYYKPVKEAHCFV 58
+L+ + NG + F + AG+ D+ V++VL SF + K+ H V
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV----SFIDNSLGLGKQLHSLV 383
Query: 59 LRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECK 118
++R + FV N L+ Y +CG++ ++ VF MP+R+ VSWNSMI +++ G
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE-SGIEVDLPLCNAVIA 177
+LY EM ++ V P VT +S++ AC + G E+ + E GIE +I
Sbjct: 444 KLYEEMTTL-EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502
Query: 178 MYAKCGSLDYARELFEEMSEKDD 200
M + G L A+ + + K D
Sbjct: 503 MLGRAGLLKEAKSFIDSLPLKPD 525
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 274/527 (51%), Gaps = 46/527 (8%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
+F+ G+ D+FT +LKA + S + VK H + + GL +DI+V NAL+ C
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQS--WLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 77 YCRCGEIGL--ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y RCG +G+ A K+F+ M ERDTVSWNSM+GG + G + +RL+ EM
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM---------- 211
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
+ DL N ++ YA+C + A ELFE+
Sbjct: 212 ------------------------------PQRDLISWNTMLDGYARCREMSKAFELFEK 241
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD--TWNALISGMVQNNWFEGAID 252
M E++ VS+ +++ GY G + AR +F M P + TW +I+G + + A
Sbjct: 242 MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
LV +M SGLK +A + S + + L G +H+ R N YV A++D YA
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA 361
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
K G + A VF+ + LV W ++ HG A+ L+++M GI+PD+VT A
Sbjct: 362 KCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
VL +C H+GL+DE F +M Y + P VE Y C+V +L R G+L EA K + MP+E
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 433 PSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVR 492
P+ WGALL ++ +V+ K D+L +++P GNY +++N+Y+ A WE + +R
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIR 541
Query: 493 KRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+M+ +GV K G+S +E+ + F D S+ +SD+IY L L
Sbjct: 542 SKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 60/418 (14%)
Query: 43 PSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWN 102
P + VK+ H ++RR L D+ + L++ C + LA +VF+ + E + N
Sbjct: 27 PKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCN 86
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC-GQSKDLVLGMEVHGFVN 161
S+I ++Q + ++ EM G + D T +++AC GQS V+ M +H +
Sbjct: 87 SLIRAHAQNSQPYQAFFVFSEMQRFG-LFADNFTYPFLLKACSGQSWLPVVKM-MHNHIE 144
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDY--ARELFEEMSEKDDVSYGSIISGYMAYGFVVKA 219
+ G+ D+ + NA+I Y++CG L A +LFE+MSE+D VS+ S++ G + G + A
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
R +F M L +WN ++ G + A +L +M
Sbjct: 205 RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP--------------------- 243
Query: 280 SNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA--RSRSLVIWTA 337
++N + ++ Y+K G + AR +FD+ ++++V WT
Sbjct: 244 ------------------ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI 285
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH--- 394
II YA G A L QM+ SG++ D + ++L AC SGL+ +I + +
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 395 ---SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+ Y + L++ YA + G L +A +++P + +W +L+G V+G
Sbjct: 346 LGSNAYVLNALLDMYA-------KCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHG 395
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ GL + L V +G+ D+ V S+L A H + R
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG--MRIHSILKR 343
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
L ++ +V NAL+ Y +CG + A VF+ +P++D VSWN+M+ G G +E L
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN---AVIA 177
+ M G + PD VT ++V+ +C + + G++ F + + +P ++
Sbjct: 404 FSRMRREG-IRPDKVTFIAVLCSCNHAGLIDEGIDY--FYSMEKVYDLVPQVEHYGCLVD 460
Query: 178 MYAKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKARDVFRGME--NPGLDTW 234
+ + G L A ++ + M E + V +G+++ + V A++V + +P
Sbjct: 461 LLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGN 520
Query: 235 NALISGM--VQNNWFEGAIDLVREMQGSGL-KP---NAVTLASTIPLFSYF 279
+L+S + +W EG D+ +M+ G+ KP ++V L I F+ F
Sbjct: 521 YSLLSNIYAAAEDW-EGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVF 570
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 48/254 (18%)
Query: 280 SNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAII 339
+NL K++HA IRR +++++A +I + + A +VF+Q + ++ + ++I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA--------------------- 378
A+A + A ++++M G+ D T +L AC+
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 379 -----HSGLVD-----------EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
+ L+D +A K+F M + + + M+G L +AG+L +A
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV-----SWNSMLGGLVKAGELRDA 204
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE-SSGNYIIMANLYSC 481
+ EMP + +W +L+G Y A + LFE PE ++ ++ M YS
Sbjct: 205 RRLFDEMP-QRDLISWNTMLDG---YARCREMSKAFE-LFEKMPERNTVSWSTMVMGYSK 259
Query: 482 AGRWEEASRVRKRM 495
AG E A + +M
Sbjct: 260 AGDMEMARVMFDKM 273
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 287/546 (52%), Gaps = 34/546 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY+ N LDLF + PDSFT+++V+ + Y K H + +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV--LGLYNYGKSVHAELFK 401
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
R +++ +E+AL+T Y +CG A VF M E+D V+W S+I G + G ++E ++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 121 YMEMLSVG-SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ +M S+ PD + SV AC + L G++VHG + ++G+ +++ + +++I +Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
+KCG + A ++F MS ++ V+ WN++IS
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVA-------------------------------WNSMIS 550
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
+NN E +IDL M G+ P++V++ S + S ++L GK +H Y +R
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 610
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ ++ A+ID Y K GF A +F + + +SL+ W +I Y +HGD AL L+ +M
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK 670
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+G PD VT ++++AC HSG V+E IF M YGI+P +E YA MV +L RAG L
Sbjct: 671 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 730
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA FI MPIE + W LL+ + + +VE G + + L +EPE Y+ + NLY
Sbjct: 731 EEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLY 790
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
AG EA+++ M+E G+HK G SWIE+S R F + S+ EI+ L L
Sbjct: 791 MEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLK 850
Query: 540 CMMREE 545
M +E
Sbjct: 851 SNMVDE 856
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 196/425 (46%), Gaps = 43/425 (10%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ PD+F+++ V+ + + K+ H F+LR L+TD F++ AL+ Y + G
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 85 LARKVFDGMPER-DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
A +VF + ++ + V WN MI G+ G E LYM + SV + + A
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGA 281
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
C QS++ G ++H V + G+ D +C ++++MY+KCG
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG-------------------- 321
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
V +A VF + + L+ WNA+++ +N++ A+DL M+ +
Sbjct: 322 -----------MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
P++ TL++ I S GK VHA +R + +A++ Y+K G A V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML--DSGIQPDQVTLTAVLTACAHSG 381
F + +V W ++I+ +G AL ++ M D ++PD +T+V ACA G
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA--G 488
Query: 382 LVDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
L EA + +H K G+ V + ++ + S+ G A K + M E + AW
Sbjct: 489 L--EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAW 545
Query: 439 GALLN 443
++++
Sbjct: 546 NSMIS 550
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 216/499 (43%), Gaps = 72/499 (14%)
Query: 9 GLYRHLLDLFASSVDAGISP---DSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLE 64
G Y L L+ S G SP FT S+LKA ++ + SY K + H V+ G
Sbjct: 38 GEYLQALHLY--SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI---HGSVVVLGWR 92
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPE-------RDTVSWNSMIGGYSQCGFYEEC 117
D F+ +LV Y +CG + A +VFDG + RD WNSMI GY + ++E
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 118 KRLYMEMLSVGSVVPDGVT---IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+ ML G V PD + +VSVM G + G ++HGF+ + ++ D L A
Sbjct: 153 VGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGNFRR-EEGKQIHGFMLRNSLDTDSFLKTA 210
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
+I MY K G A +F E+ +K +V W
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVL------------------------------W 240
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
N +I G + E ++DL + + +K + + + S N G+++H ++
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
+ YV T+++ Y+K G + A VF + L IW A++ AYA + AL L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ M + PD TL+ V++ C+ GL + + + K IQ + ++ + S
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF-KRPIQSTSTIESALLTLYS 419
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNG----------ASVYGDVETGKFACDHLFEI 464
+ G +A M E AWG+L++G V+GD++ D +
Sbjct: 420 KCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMK------DDDDSL 472
Query: 465 EPESSGNYIIMANLYSCAG 483
+P+S I+ + +CAG
Sbjct: 473 KPDSD---IMTSVTNACAG 488
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 173/392 (44%), Gaps = 45/392 (11%)
Query: 100 SWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGF 159
S NS I Q G Y + LY + T S+++AC +L G +HG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 160 VNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKA 219
V G D + +++ MY KCG LDYA ++F+ S+ SG V A
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ--------SG-------VSA 130
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
RDV WN++I G + F+ + R M G++P+A +L+ + +
Sbjct: 131 RDV---------TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 280 SNLRG--GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIWT 336
N R GK++H + +R D + ++ TA+ID Y K G A +VF + +S +V+W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 337 AIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS- 395
+I + G +L LY ++ ++ + T L AC+ S E +H
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS----ENSGFGRQIHCD 297
Query: 396 --KYGIQPLVEQYAC--MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
K G+ + Y C ++ + S+ G + EA S + ++ + W A++ + Y +
Sbjct: 298 VVKMGLHN--DPYVCTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMV---AAYAEN 351
Query: 452 ETGKFACDHLFEIEPESS--GNYIIMANLYSC 481
+ G A D LF + S + ++N+ SC
Sbjct: 352 DYGYSALD-LFGFMRQKSVLPDSFTLSNVISC 382
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 304/589 (51%), Gaps = 46/589 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L A +GLY + L+L+ G++ D + + +L+A + + H V++
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRY--LGRFGLCRAFHTQVIQ 186
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ---------- 110
GL+ ++ V N L+T Y + G +G A +F MP R+ +SWN MI G+SQ
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 111 -------------------------CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
CG +E+ + + M G+ V G + C
Sbjct: 247 FEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV-SGEALAVFFSVCA 305
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+ + L + +VHG+V + G E LP NA+I +Y K G + A LF ++ K S+ S
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 206 IISGYMAYGFVVKARDVFRGME--------NPGLDTWNALISGMVQNNWFEGAIDLVREM 257
+I+ ++ G + +A +F +E + TW ++I G + +++ R+M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 258 QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI 317
Q S + N+VT+ + + + L G+E+H + IR +NI V A+++ YAK G +
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
VF+ R + L+ W +II Y HG A AL ++ +M+ SG PD + L AVL+AC
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
+H+GLV++ +IF +M ++G++P E YAC+V +L R G L EA++ + MP+EP
Sbjct: 546 SHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCV 605
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEE 497
GALLN ++ +V+ + L +EPE +G+Y++++N+YS GRWEE++ VR ++
Sbjct: 606 LGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKK 665
Query: 498 IGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEG 546
+ K+ GSSWIE+ + F + + + IY LE L M ++G
Sbjct: 666 KDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 38/399 (9%)
Query: 27 SPDSFTVTSVLKAIASPS---FSYY----------KPVKEAHCFVLRRGLETDIFVENAL 73
SPD+ +V+S ++ F Y+ + ++ H VL L IF +L
Sbjct: 35 SPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVL---LSDFIFRSGSL 91
Query: 74 ----VTCYCRCGEIGLARKVFDGMPE---RDTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
++ Y R G + AR VF+ + D WNS++ G YE LY M
Sbjct: 92 AANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQ 151
Query: 127 VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
G + DG + +++AC L H V + G++ +L + N ++ +Y K G +
Sbjct: 152 RG-LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMV 242
A LF EM ++ +S+ +I G+ A +F M+ P TW +++S
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG---GKEVHAYAIRRCYDQ 299
Q FE + M+ SG NAV+ + FS + L ++VH Y I+ +++
Sbjct: 271 QCGKFEDVLKYFHLMRMSG---NAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE 327
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ A+I Y K G + A +F Q R++ + W ++IT++ G AL L++++
Sbjct: 328 YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 360 D----SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH 394
+ ++ + VT T+V+ C G D++ + F M
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 12/303 (3%)
Query: 204 GSIISGYMAYGFVVKARDVFRGMEN---PGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
++IS Y G ++ AR+VF + L WN+++ V + +E A++L R M+
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
GL + L + Y + H I+ +N++V ++ Y K G + A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+F + R+ + W +I ++ D A+ ++ M +PD+VT T+VL+ +
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK---FISEMPIEPSAKA 437
G ++ K F+ M G E A V + LS A K ++ + E +
Sbjct: 273 GKFEDVLKYFHLMRMS-GNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS 331
Query: 438 WGALLNGASVYGDVETGKFACDHLF-EIEPESSGNYIIMANLYSCAGRWEEASRVRKRME 496
AL++ VYG K A +HLF +I + ++ + + AG+ +EA + +E
Sbjct: 332 RNALIH---VYGKQGKVKDA-EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 497 EIG 499
E+
Sbjct: 388 EMN 390
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 285/544 (52%), Gaps = 40/544 (7%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV--KEAHCFVLRRGLET 65
NG + L F G+ P+ FT KA+AS PV K+ H ++ G
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL----PVTGKQIHALAVKCGRIL 141
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D+FV + YC+ ARK+FD +PER+ +WN+ I G E ++E
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
+ P+ +T + + AC L LGM++HG V SG + D+ +CN +I Y KC +
Sbjct: 202 RIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 186 DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
+ +F EM K+ VS+ S+++ Y VQN+
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAY-------------------------------VQNH 289
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
E A L + ++ + ++S + + + L G+ +HA+A++ C ++ I+V +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI-- 363
A++D Y K G I + Q FD+ ++LV ++I YA G +AL L+ +M G
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAA 423
P+ +T ++L+AC+ +G V+ KIF++M S YGI+P E Y+C+V +L RAG + A
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Query: 424 KFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAG 483
+FI +MPI+P+ WGAL N ++G + G A ++LF+++P+ SGN+++++N ++ AG
Sbjct: 470 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 529
Query: 484 RWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMR 543
RW EA+ VR+ ++ +G+ K G SWI + ++ AF AKD S+ + EI T L L M
Sbjct: 530 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 589
Query: 544 EEGY 547
GY
Sbjct: 590 AAGY 593
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 187/425 (44%), Gaps = 50/425 (11%)
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
F+ N L+ Y + AR V P R+ VSW S+I G +Q G + + EM
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G VVP+ T +A + V G ++H + G +D+ + + MY K D
Sbjct: 103 G-VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
AR+LF+E+ E++ L+TWNA IS V +
Sbjct: 162 ARKLFDEIPERN-------------------------------LETWNAFISNSVTDGRP 190
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
AI+ E + PN++T + + S + +L G ++H +R +D ++ V +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
ID Y K I + +F + +++ V W +++ AY + + A LY + ++
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 368 VTLTAVLTACA-HSGLVDEAWKIFNTMHSKYGIQPLVEQY----ACMVGVLSRAGKLSEA 422
+++VL+ACA +GL ++ ++H+ + ++ VE+ + +V + + G + ++
Sbjct: 311 FMISSVLSACAGMAGL-----ELGRSIHA-HAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG---NYIIMANLY 479
+ EMP E + +L+ G + G V+ A E+ P G NY+ +L
Sbjct: 365 EQAFDEMP-EKNLVTRNSLIGGYAHQGQVD---MALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 480 SCAGR 484
S R
Sbjct: 421 SACSR 425
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 288/570 (50%), Gaps = 69/570 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ NG + ++ + S I P SFT+ S L + AS + K ++ H L+
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS--LKWAKLGQQIHGESLK 443
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G++ ++ V NAL+T Y G + RK+F MPE D VSWNS+IG ++
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE-------- 495
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLV----------------LGMEVHGFVNESG 164
+P+ V Q GQ + + LG ++HG ++
Sbjct: 496 --------RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 165 IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFR 224
I + NA+IA Y KCG +D ++F M+E+ D
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV---------------------- 585
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
TWN++ISG + N A+DLV M +G + ++ A+ + F+ + L
Sbjct: 586 --------TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
G EVHA ++R C + ++ V +A++D Y+K G + A + F+ R+ W ++I+ YA
Sbjct: 638 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 697
Query: 345 HGDASLALGLYAQM-LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLV 403
HG AL L+ M LD PD VT VL+AC+H+GL++E +K F +M YG+ P +
Sbjct: 698 HGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRI 757
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD---VETGKFACDH 460
E ++CM VL RAG+L + FI +MP++P+ W +L GA + E GK A +
Sbjct: 758 EHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL-GACCRANGRKAELGKKAAEM 816
Query: 461 LFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIA 520
LF++EPE++ NY+++ N+Y+ GRWE+ + RK+M++ V K G SW+ M + F+A
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 521 KDVSNERSDEIYTYLEGLFCMMREEGYILQ 550
D S+ +D IY L+ L MR+ GY+ Q
Sbjct: 877 GDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 212/450 (47%), Gaps = 47/450 (10%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
YS G R +F+S G P +T S++ S + + +++ C + + GL
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
TD+FV + LV+ + + G + ARKVF+ M R+ V+ N ++ G + + EE +L+M+M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 125 LSVGSVVPDGVTIV-------SVMQACGQSKDLVLGMEVHGFVNESG-IEVDLPLCNAVI 176
S+ V P+ I+ S+ + G K G EVHG V +G ++ + + N ++
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKK----GREVHGHVITTGLVDFMVGIGNGLV 356
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
MYAKCGS+ AR +F M++KD V +WN+
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSV-------------------------------SWNS 385
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
+I+G+ QN F A++ + M+ + P + TL S++ + + G+++H +++
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL--ALGL 354
D N+ V+ A++ YA+ G+++ R++F V W +II A A + SL A+
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL-ARSERSLPEAVVC 504
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ +G + +++T ++VL+A + E K + + K I ++
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSF-GELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ G++ K S M W ++++G
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 198/450 (44%), Gaps = 50/450 (11%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
YS NG ++ L V GI + + SVL+A ++ H + +
Sbjct: 77 YSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYA 136
Query: 65 TDIFVENALVTCYCRC-GEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
D V N L++ Y +C G +G A F + +++VSWNS+I YSQ G R++
Sbjct: 137 VDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSS 196
Query: 124 MLSVGSVVPDGVTIVS-VMQACGQSK-DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
M GS P T S V AC ++ D+ L ++ + +SG+ DL + + +++ +AK
Sbjct: 197 MQYDGS-RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 182 CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGM 241
GSL YAR++F +M ++ V T N L+ G+
Sbjct: 256 SGSLSYARKVFNQMETRNAV-------------------------------TLNGLMVGL 284
Query: 242 VQNNWFEGAIDLVREMQGS-GLKPNA-VTLASTIPLFSYFSN--LRGGKEVHAYAIRR-C 296
V+ W E A L +M + P + V L S+ P +S L+ G+EVH + I
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
D + + +++ YAK G I AR+VF + V W ++IT +G A+ Y
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAW-KIFNTMHS---KYGIQPLVEQYACMVGV 412
M I P TL + L++CA W K+ +H K GI V ++ +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCA-----SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALL 442
+ G L+E K S MP E +W +++
Sbjct: 460 YAETGYLNECRKIFSSMP-EHDQVSWNSII 488
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 42/326 (12%)
Query: 157 HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFV 216
H + ++ ++ D+ LCN +I Y + G AR++F+EM ++ VS+ I+SGY G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 217 VKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
+A R M + G+ N + + ++R Q G S LF
Sbjct: 84 KEALVFLRDM----------VKEGIFSNQY--AFVSVLRACQEIG---------SVGILF 122
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK-LGFIHGARQVFDQARSRSLVIW 335
G+++H + Y + V+ +I Y K +G + A F ++ V W
Sbjct: 123 --------GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL-TAVLTACAHSGLVDEAWKIFNTMH 394
+II+ Y+ GD A +++ M G +P + T + V TAC+ L + ++ +
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIM 231
Query: 395 ---SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
K G+ + + +V +++G LS A K ++M + G ++
Sbjct: 232 CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 452 ETGKFACD--HLFEIEPESSGNYIIM 475
E K D + ++ PES Y+I+
Sbjct: 292 EATKLFMDMNSMIDVSPES---YVIL 314
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 278/506 (54%), Gaps = 17/506 (3%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
+ G+S D F+++ VLKA + F K + H F+ + GL +D+F++N L+ Y +CG
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGF--VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGC 171
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLY----MEMLSVGSVVPDGVTIV 138
+GL+R++FD MP+RD+VS+NSMI GY +CG + L+ MEM ++ ++
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNL-------ISWN 224
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK 198
S++ Q+ D G+++ + E DL N++I Y K G ++ A+ LF+ M +
Sbjct: 225 SMISGYAQTSD---GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR 281
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ 258
D V++ ++I GY GFV A+ +F M + + +N++++G VQN + A+++ +M+
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 259 G-SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI 317
S L P+ TL +P + L ++H Y + + + + A+ID Y+K G I
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
A VF+ ++S+ W A+I A HG A + Q+ ++PD +T VL AC
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
+HSGLV E F M K+ I+P ++ Y CMV +LSR+G + A I EMP+EP+
Sbjct: 462 SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI 521
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEE 497
W L S + + ETG+ HL + +Y++++N+Y+ G W++ RVR M+E
Sbjct: 522 WRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKE 581
Query: 498 IGVHKIRGSSWIEMSGRLIAFIAKDV 523
+ KI G SWIE+ GR+ F +
Sbjct: 582 RKIEKIPGCSWIELDGRVHEFFVDSI 607
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS---LDYARELF 192
+ + V+ +C S D+ ++HG + ++GI + L ++ +A D+AR +F
Sbjct: 14 STIHVLGSCKTSDDV---NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
E Y F F +E+P L WNA+I A+
Sbjct: 71 HE---------------YHVCSFS------FGEVEDPFL--WNAVIKSHSHGKDPRQALL 107
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
L+ M +G+ + +L+ + S ++GG ++H + + ++++ +I Y
Sbjct: 108 LLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYL 167
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
K G + +RQ+FD+ R V + ++I Y G A L+ M + ++ +
Sbjct: 168 KCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNS 225
Query: 373 VLTACAH-SGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
+++ A S VD A K+F M K I + M+ + G++ +A MP
Sbjct: 226 MISGYAQTSDGVDIASKLFADMPEKDLI-----SWNSMIDGYVKHGRIEDAKGLFDVMP- 279
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHL 461
W +++G + G V K D +
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQM 309
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 278/497 (55%), Gaps = 1/497 (0%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K+ + ++ GL F+ +V + ++ A ++F+ + + +NS+I Y+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
Y + R+Y ++L +PD T + ++C LG +VHG + + G +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
NA+I MY K L A ++F+EM E+D +S+ S++SGY G + KA+ +F M + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
+W A+ISG + A+D REMQ +G++P+ ++L S +P + +L GK +H Y
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
A RR + + V A+I+ Y+K G I A Q+F Q + ++ W+ +I+ YA HG+A A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
+ + +M + ++P+ +T +L+AC+H G+ E + F+ M Y I+P +E Y C++
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
VL+RAGKL A + MP++P +K WG+LL+ G+++ A DHL E+EPE GN
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 472 YIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEI 531
Y+++AN+Y+ G+WE+ SR+RK + + K G S IE++ + F++ D S EI
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Query: 532 YTYLEGLFCMMREEGYI 548
L+ LF +++ I
Sbjct: 507 SIVLQ-LFTSHQDQDVI 522
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ G Y +D F AGI PD ++ SVL + A + K H + R
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA--QLGSLELGKWIHLYAER 269
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
RG V NAL+ Y +CG I A ++F M +D +SW++MI GY+ G
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIET 329
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ EM V P+G+T + ++ AC G+ + + IE + +I +
Sbjct: 330 FNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL 388
Query: 180 AKCGSLDYARELFEEMSEKDDVS-YGSIIS 208
A+ G L+ A E+ + M K D +GS++S
Sbjct: 389 ARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
IP + K+++A I Q+ ++ T ++D K+ + A ++F+Q + ++
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 333 VIWTAIITAYAAHGDASLALGLYAQMLDSGIQ-PDQVTLTAVLTACAHSGLVDEAWKIFN 391
++ +II AY + + +Y Q+L + PD+ T + +CA G ++
Sbjct: 74 FLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHG 133
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+ K+G + V ++ + + L +A K EM E +W +LL+G + G +
Sbjct: 134 HL-CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGYARLGQM 191
Query: 452 ETGKFACDHLFEIEPESS-GNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
+ K LF + + + ++ M + Y+ G + EA + M+ G+
Sbjct: 192 KKAK----GLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 304 bits (779), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 295/540 (54%), Gaps = 43/540 (7%)
Query: 18 FASSVDAGISPDSFTVTSVLKAIAS--PSFSYYKPVKEAHCFVLRRGLETDIFVENALVT 75
F+S + P + +KA +S FS + ++A F G ++DIFV +AL+
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVF----GYQSDIFVSSALIV 119
Query: 76 CYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML-----SVGSV 130
Y CG++ ARKVFD +P+R+ VSW SMI GY G + L+ ++L ++
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS--LDYA 188
D + +VSV+ AC + L +H FV + G + + + N ++ YAK G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
R++F+++ +KD VSY SI+S Y G +A +VFR + + T+NA
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA------------ 287
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
+TL++ + S+ LR GK +H IR + ++ V T+II
Sbjct: 288 ------------------ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
D Y K G + AR+ FD+ +++++ WTA+I Y HG A+ AL L+ M+DSG++P+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
T +VL AC+H+GL E W+ FN M ++G++P +E Y CMV +L RAG L +A I
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
M ++P + W +LL ++ +VE + + LFE++ + G Y++++++Y+ AGRW++
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
RVR M+ G+ K G S +E++G + F+ D + + ++IY +L L + E GY+
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 174/363 (47%), Gaps = 47/363 (12%)
Query: 1 MLIAYSFNG-------LYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVK 52
M+ Y NG L++ LL + + D + DS + SV+ A + P+ + +
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI- 205
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGE--IGLARKVFDGMPERDTVSWNSMIGGYSQ 110
H FV++RG + + V N L+ Y + GE + +ARK+FD + ++D VS+NS++ Y+Q
Sbjct: 206 --HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
G E ++ ++ V + +T+ +V+ A S L +G +H V G+E D+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+ ++I MY KCG ++ AR+ F+ M K+ S+ ++I+GY +G KA ++F M
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM---- 379
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS-NLRGGKEVH 289
ID SG++PN +T S + S+ ++ G + +
Sbjct: 380 --------------------ID-------SGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDA 348
A R + + ++D + GF+ A + + + + +IW++++ A H +
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
Query: 349 SLA 351
LA
Sbjct: 473 ELA 475
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 174/359 (48%), Gaps = 37/359 (10%)
Query: 97 DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV 156
D SWNS+I ++ G E + M + S+ P + ++AC D+ G +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 157 HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFV 216
H G + D+ + +A+I MY+ CG L+ AR++F+E+ +++ VS+ S+I GY G
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 217 VKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
+ A +F+ + +V N + A+ L +++ L S I
Sbjct: 159 LDAVSLFKDL--------------LVDENDDDDAMFL-----------DSMGLVSVISAC 193
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK--LGFIHGARQVFDQARSRSLVI 334
S + +H++ I+R +D+ + V ++D YAK G + AR++FDQ + V
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQP-DQVTLTAVLTACAHSGLVDEAWKIFNTM 393
+ +I++ YA G ++ A ++ +++ + + + +TL+ VL A +HSG A +I +
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG----ALRIGKCI 309
Query: 394 HS---KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
H + G++ V ++ + + G++ A K M + ++W A++ G ++G
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 142/333 (42%), Gaps = 52/333 (15%)
Query: 224 RGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
R ++ + +WN++I+ + ++ A+ M+ L P + I S ++
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 284 GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
GK+ H A Y +I+V++A+I Y+ G + AR+VFD+ R++V WT++I Y
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 344 AHGDASLALGLYAQML------DSGIQPDQVTLTAVLTACA-----------HSGLV--- 383
+G+A A+ L+ +L D + D + L +V++AC+ HS ++
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 384 -DEAWKIFNTMHSKYG-------------IQPLVEQ----YACMVGVLSRAGKLSEA--- 422
D + NT+ Y +V++ Y ++ V +++G +EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 423 -AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS---GNYIIMANL 478
+ + + +A +L S G + GK D + + E G II ++
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII--DM 331
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
Y GR E A + RM+ V SW M
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVR-----SWTAM 359
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 269/518 (51%), Gaps = 44/518 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV---KEAHCF 57
M+ Y NG L +F V+ + D T+ S+L P + K + + H
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML-----PVCGHLKDLEMGRNVHKL 243
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
V + L I V+NALV Y +CG + AR VFD M RD ++W MI GY++ G E
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L ++ V P+ VTI S++ CG + + G +HG+ + D+ + ++I+
Sbjct: 304 LEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MYAKC +D VF G W+A+
Sbjct: 363 MYAKCKRVDLCFR-------------------------------VFSGASKYHTGPWSAI 391
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
I+G VQN A+ L + M+ ++PN TL S +P ++ ++LR +H Y + +
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFD----QARSRSLVIWTAIITAYAAHGDASLALG 353
++ AT ++ Y+K G + A ++F+ + +S+ +V+W A+I+ Y HGD AL
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL 413
++ +M+ SG+ P+++T T+ L AC+HSGLV+E +F M Y Y C+V +L
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 414 SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYI 473
RAG+L EA I+ +P EP++ WGALL + +V+ G+ A + LFE+EPE++GNY+
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 474 IMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
++AN+Y+ GRW++ +VR ME +G+ K G S IE+
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 220/451 (48%), Gaps = 40/451 (8%)
Query: 5 YSFNGLYRHLLDLFASSVDAGIS--PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG 62
Y GLY + +F V G+ PD +T V KA + K H +LR
Sbjct: 90 YVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA--AGELKSMKLGLVVHGRILRSW 147
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
D +V+NAL+ Y G++ +AR VFD M RD +SWN+MI GY + G+ + ++
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
M++ SV D TIVS++ CG KDL +G VH V E + + + NA++ MY KC
Sbjct: 208 WMVN-ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKC 266
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G +D AR +F+ M +D +++ +I+GY G V
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDV-------------------------- 300
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
E A++L R MQ G++PNAVT+AS + + + GK +H +A+R+ +I
Sbjct: 301 -----ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ T++I YAK + +VF A W+AII + S ALGL+ +M
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
++P+ TL ++L A A + +A I + +K G ++ +V V S+ G L A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYL-TKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 423 AKFISEMPIEPSAK---AWGALLNGASVYGD 450
K + + + +K WGAL++G ++GD
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 175/364 (48%), Gaps = 39/364 (10%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
K HC V+ G + + VT Y CG I ARK+F+ MP+ +S+N +I Y +
Sbjct: 34 TKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 111 CGFYEECKRLYMEMLSVG-SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
G Y + +++ M+S G VPDG T V +A G+ K + LG+ VHG + S D
Sbjct: 93 EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
+ NA++AMY G ++ AR++F+ M +D +S+ ++ISGY G++ A +F M N
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+D +A T+ S +P+ + +L G+ VH
Sbjct: 213 SVDLDHA-------------------------------TIVSMLPVCGHLKDLEMGRNVH 241
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
+ I V A+++ Y K G + AR VFD+ R ++ WT +I Y GD
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE-----AWKIFNTMHSKYGIQP-LV 403
AL L M G++P+ VT+ ++++ C + V++ W + ++S I+ L+
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 404 EQYA 407
YA
Sbjct: 362 SMYA 365
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 285/523 (54%), Gaps = 37/523 (7%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L+LF +G P+S ++T + A + + + KE H +++G E D +V +ALV
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSR--LLWLERGKEIHRKCVKKGFELDEYVNSALV 250
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +C + +AR+VF MP + V+WNSMI GY G + C + M+ G+ P
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR-PSQ 309
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T+ S++ AC +S++L+ G +HG+V S + D+ + ++I +Y KCG + A +F +
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK 369
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ-NNWFEGAIDL 253
+ DV+ ++WN +IS + NWF+ A+++
Sbjct: 370 T--QKDVA-----------------------------ESWNVMISSYISVGNWFK-AVEV 397
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK 313
+M G+KP+ VT S +P S + L GK++H + + + +A++D Y+K
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 314 LGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G A ++F+ + +V WT +I+AY +HG AL + +M G++PD VTL AV
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP-IE 432
L+AC H+GL+DE K F+ M SKYGI+P++E Y+CM+ +L RAG+L EA + I + P
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Query: 433 PSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVR 492
+A+ L + ++ + G L E P+ + Y+++ NLY+ W+ A RVR
Sbjct: 578 DNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVR 637
Query: 493 KRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYL 535
+M+E+G+ K G SWIEMS ++ F A+D S+ R++ +Y L
Sbjct: 638 LKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 182/370 (49%), Gaps = 42/370 (11%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
+S + S+L+ + + S + +K H +L GL D+ + +L+ Y C + AR
Sbjct: 2 ESSKLLSLLRECTNSTKSL-RRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 89 VFDGMPER-DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
VF+ R D WNS++ GYS+ + + ++ +L+ VPD T +V++A G
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
LG +H V +SG D+ + ++++ MYAK + + ++F+EM E+D
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERD-------- 172
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
+ +WN +IS Q+ E A++L M+ SG +PN+V
Sbjct: 173 -----------------------VASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
+L I S L GKE+H +++ ++ + YV +A++D Y K + AR+VF +
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
+SLV W ++I Y A GD+ + + +M+ G +P Q TLT++L AC+ S
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR------ 323
Query: 388 KIFNTMHSKY 397
N +H K+
Sbjct: 324 ---NLLHGKF 330
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 13/298 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y G + +++ + G P T+TS+L A + + K H +V+R
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG--KFIHGYVIR 337
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ DI+V +L+ Y +CGE LA VF + SWN MI Y G + + +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y +M+SVG V PD VT SV+ AC Q L G ++H ++ES +E D L +A++ MY+
Sbjct: 398 YDQMVSVG-VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 456
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNA 236
KCG+ A +F + +KD VS+ +IS Y ++G +A F M+ GL T A
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 237 LISGMVQNNWFEGAIDLVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
++S + + +M+ G++P + I + R G+ + AY I
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILG-----RAGRLLEAYEI 569
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +Y G + ++++ V G+ PD T TSVL A + + + K+ H +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS--QLAALEKGKQIHLSISE 438
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
LETD + +AL+ Y +CG A ++F+ +P++D VSW MI Y G E
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ 498
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ EM G + PDGVT+++V+ ACG + + G++ + GIE + + +I +
Sbjct: 499 FDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 180 AKCGSLDYARELFEEMSEKDD 200
+ G L A E+ ++ E D
Sbjct: 558 GRAGRLLEAYEIIQQTPETSD 578
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 312/617 (50%), Gaps = 74/617 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L +YS +G L+LF G +P+S+T+ S L A FSY K KE H VL+
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL--TACDGFSYAKLGKEIHASVLK 312
Query: 61 RGLET-DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ +++V NAL+ Y RCG++ A ++ M D V+WNS+I GY Q Y+E
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ +M++ G D V++ S++ A G+ +L+ GME+H +V + G + +L + N +I MY
Sbjct: 373 FFSDMIAAGHK-SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 431
Query: 180 AKCGSLDY-------------------------------ARELFEEMSEK----DDVSYG 204
+KC Y A ELF ++++K D++ G
Sbjct: 432 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 491
Query: 205 SII--SGYMAYGFVVK--------------------------------ARDVFRGMENPG 230
SI+ S + +VK A VF ++
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
+ +W ++IS N A++L R M +GL ++V L + + S L G+E+H
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
Y +R+ + +A A++D YA G + A+ VFD+ + L+ +T++I AY HG
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
A+ L+ +M + PD ++ A+L AC+H+GL+DE M +Y ++P E Y C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG 470
+L RA + EA +F+ M EP+A+ W ALL + + E G+ A L E+EP++ G
Sbjct: 732 DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG 791
Query: 471 NYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDE 530
N ++++N+++ GRW + +VR +M+ G+ K G SWIEM G++ F A+D S+ S E
Sbjct: 792 NLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKE 851
Query: 531 IYTYL-EGLFCMMREEG 546
IY L E + RE+G
Sbjct: 852 IYEKLSEVTRKLEREKG 868
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 178/378 (47%), Gaps = 36/378 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY NG L L+ + G+ + ++LKA A + E H +++
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK--LRDIRSGSELHSLLVK 210
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER-DTVSWNSMIGGYSQCGFYEECKR 119
G + F+ NALV+ Y + ++ AR++FDG E+ D V WNS++ YS G E
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE-VDLPLCNAVIAM 178
L+ EM G P+ TIVS + AC LG E+H V +S +L +CNA+IAM
Sbjct: 271 LFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
Y +CG + A + +M+ D V++ S+I GY
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGY---------------------------- 361
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
VQN ++ A++ +M +G K + V++ S I SNL G E+HAY I+ +D
Sbjct: 362 ---VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
N+ V +ID Y+K + F + + L+ WT +I YA + AL L+ +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 359 LDSGIQPDQVTLTAVLTA 376
++ D++ L ++L A
Sbjct: 479 AKKRMEIDEMILGSILRA 496
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 152/312 (48%), Gaps = 36/312 (11%)
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
F+ LV Y +CG + A KVFD MP+R +WN+MIG Y G LY M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 128 GSVVPDGV-TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
G VP G+ + ++++AC + +D+ G E+H + + G + NA+++MYAK L
Sbjct: 177 G--VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 234
Query: 187 YARELFEEMSEKDD-VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
AR LF+ EK D V + SI+S Y G L+T
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSG--------------KSLET------------ 268
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR-RCYDQNIYVA 304
++L REM +G PN+ T+ S + FS + GKE+HA ++ + +YV
Sbjct: 269 -----LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC 323
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
A+I Y + G + A ++ Q + +V W ++I Y + AL ++ M+ +G +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 365 PDQVTLTAVLTA 376
D+V++T+++ A
Sbjct: 384 SDEVSMTSIIAA 395
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 50/315 (15%)
Query: 140 VMQACGQSKDLVLGMEVHG--FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
V++ CG+ + + G ++H F E+D L ++ MY KCGSLD A ++F+EM +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 198 KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM 257
R F WN +I V N A+ L M
Sbjct: 145 ----------------------RTAF---------AWNTMIGAYVSNGEPASALALYWNM 173
Query: 258 QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI 317
+ G+ + + + + ++R G E+H+ ++ Y ++ A++ YAK +
Sbjct: 174 RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDL 233
Query: 318 HGARQVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
AR++FD + + V+W +I+++Y+ G + L L+ +M +G P+ T+ + LTA
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 377 C-----AHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC--MVGVLSRAGKLSEAAKFISEM 429
C A G A + ++ HS E Y C ++ + +R GK+ +A + + +M
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSS-------ELYVCNALIAMYTRCGKMPQAERILRQM 346
Query: 430 PIEPSAKAWGALLNG 444
W +L+ G
Sbjct: 347 N-NADVVTWNSLIKG 360
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 279/513 (54%), Gaps = 37/513 (7%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
+G + L + A D + D T+ + + SF +KE HC+ L++ +
Sbjct: 375 HGTFDVLRQMLAGGED--VKADEVTILNAVPVCFHESF--LPSLKELHCYSLKQEFVYNE 430
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
V NA V Y +CG + A++VF G+ + SWN++IGG++Q +++M +
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KI 489
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
++PD T+ S++ AC + K L LG EVHGF+ + +E DL +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV---------------- 533
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
Y S++S Y+ G + + +F ME+ L +WN +I+G +QN +
Sbjct: 534 ---------------YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
+ A+ + R+M G++ +++ S +LR G+E HAYA++ + + ++A ++
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
ID YAK G I + +VF+ + +S W A+I Y HG A A+ L+ +M +G PD
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
+T VLTAC HSGL+ E + + M S +G++P ++ YAC++ +L RAG+L +A + ++
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 428 -EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
EM E W +LL+ ++ ++E G+ LFE+EPE NY++++NLY+ G+WE
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 487 EASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFI 519
+ +VR+RM E+ + K G SWIE++ ++ +F+
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 851
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 205/381 (53%), Gaps = 39/381 (10%)
Query: 4 AYSFNGLYRHLLDLFASSVDA-GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG 62
+YS N LY +L+ F + + PD FT V+KA A S H V++ G
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG--MSDVGIGLAVHGLVVKTG 217
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
L D+FV NALV+ Y G + A ++FD MPER+ VSWNSMI +S GF EE L
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 123 EMLSV---GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
EM+ G+ +PD T+V+V+ C + +++ LG VHG+ + ++ +L L NA++ MY
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
+KCG + A+ +F+ + K+ VS+ +++ G+ A G DT
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG-----------------DT------ 374
Query: 240 GMVQNNWFEGAIDLVREMQGSG--LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
G D++R+M G +K + VT+ + +P+ + S L KE+H Y++++ +
Sbjct: 375 --------HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
N VA A + +YAK G + A++VF RS+++ W A+I +A D L+L + Q
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 358 MLDSGIQPDQVTLTAVLTACA 378
M SG+ PD T+ ++L+AC+
Sbjct: 487 MKISGLLPDSFTVCSLLSACS 507
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 41/395 (10%)
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
L D + ++T Y CG +R VFD + ++ WN++I YS+ Y+E ++
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
EM+S ++PD T V++AC D+ +G+ VHG V ++G+ D+ + NA+++ Y
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G + A +LF+ M E++ VS WN++I
Sbjct: 236 GFVTDALQLFDIMPERNLVS-------------------------------WNSMIRVFS 264
Query: 243 QNNWFEGAIDLVREM---QGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
N + E + L+ EM G G P+ TL + +P+ + + GK VH +A++ D
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
+ + + A++D Y+K G I A+ +F ++++V W ++ ++A GD + QM
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 359 LDSG--IQPDQVTLTAVLTACAHSGLVDEAWKIF-NTMHSKYGIQPLVEQYACMVGVLSR 415
L G ++ D+VT+ + C H + ++ ++ ++ LV V ++
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAK 442
Query: 416 AGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
G LS A + + + +W AL+ G + D
Sbjct: 443 CGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSND 476
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 267/509 (52%), Gaps = 37/509 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ ++S + + LF + G+ D F+V S+L + + K+ H + L+
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG-----KQVHGYTLK 478
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL D+ V ++L T Y +CG + + K+F G+P +D W SMI G+++ G+ E L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ EML G+ PD T+ +V+ C L G E+HG+ +GI+ + L +A++ MY+
Sbjct: 539 FSEMLDDGTS-PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCGSL AR++++ + E D VS S+ISGY +G
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHG-------------------------- 631
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
++Q+ + L R+M SG ++ ++S + + G +VHAY +
Sbjct: 632 LIQDGFL-----LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE 686
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
V ++++ Y+K G I + F Q L+ WTA+I +YA HG A+ AL +Y M +
Sbjct: 687 PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
G +PD+VT VL+AC+H GLV+E++ N+M YGI+P Y CMV L R+G+L
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
EA FI+ M I+P A WG LL ++G+VE GK A E+EP +G YI ++N+ +
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILA 866
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
G W+E RK M+ GV K G S +
Sbjct: 867 EVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 166/340 (48%), Gaps = 36/340 (10%)
Query: 51 VKEAHCFVLRRGL-ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS 109
+ +AH +LRR L D+F+ +L++ Y G + A K+FD +P+ D VS N MI GY
Sbjct: 69 ILQAH--LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
Q +EE R + +M +G + ++ SV+ AC + + +L
Sbjct: 127 QHRLFEESLRFFSKMHFLG-FEANEISYGSVISACSALQAPLFS--------------EL 171
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
C+ + Y F E+ E ++I + A VFR +
Sbjct: 172 VCCHTIKMGY-----------FFYEVVE------SALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ WN +I+G ++N + DL EM KP++ T +S + + LR GK V
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
A I +C ++++V TAI+D YAK G + A +VF + + S+V WT +++ Y DA
Sbjct: 275 ARVI-KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKI 389
AL ++ +M SG++ + T+T+V++AC +V EA ++
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 205/457 (44%), Gaps = 55/457 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKA---IASPSFSYYKPVKEAHCF 57
M+ Y + L+ L F+ G + + SV+ A + +P FS + C
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS-----ELVCCH 175
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
++ G VE+AL+ + + A KVF + WN++I G + Y
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L+ EM VG PD T SV+ AC + L G V V + G E D+ +C A++
Sbjct: 236 FDLFHEM-CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
+YAKCG + +A +VF + NP + +W +
Sbjct: 294 LYAKCGHM-------------------------------AEAMEVFSRIPNPSVVSWTVM 322
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
+SG ++N A+++ +EM+ SG++ N T+ S I S + +VHA+ + +
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVF---DQARSRSLVIWTAIITAYAAHGDASLALGL 354
+ VA A+I Y+K G I + QVF D + +++V +IT+++ A+ L
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 355 YAQMLDSGIQPDQVTLTAVLTA--CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
+ +ML G++ D+ ++ ++L+ C + G + + K G+ + + + +
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTL 494
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
S+ G L E+ K +P + +A W ++++G + YG
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 129/299 (43%), Gaps = 24/299 (8%)
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
S++S Y G + A +F + P + + N +ISG Q+ FE ++ +M G +
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
N ++ S I S + V + I+ Y V +A+ID ++K A +VF
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF 208
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA-----H 379
+ S ++ W II + + L+ +M +PD T ++VL ACA
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 380 SGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWG 439
G V +A I + +V+ YA + G ++EA + S +P PS +W
Sbjct: 269 FGKVVQARVIKCGAEDVFVCTAIVDLYA-------KCGHMAEAMEVFSRIP-NPSVVSWT 320
Query: 440 ALLNGASVYGDVETGKFACDHLFEIEPESSG---NYIIMANLYSCAGRWE---EASRVR 492
+L+G + D F+ +F+ E SG N + ++ S GR EAS+V
Sbjct: 321 VMLSGYTKSNDA----FSALEIFK-EMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 271/502 (53%), Gaps = 34/502 (6%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H +L G + D F+ L+ Y G + ARKVFD +R WN++ + G
Sbjct: 100 HRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK----DLVLGMEVHGFVNESGIEVDLP 170
EE LY +M +G V D T V++AC S+ L+ G E+H + G +
Sbjct: 160 EEVLGLYWKMNRIG-VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+ ++ MYA+ G +DYA +F M ++ VS+ ++I+ Y G +A FR
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR------ 272
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
+++RE + S PN+VT+ S + + + L GK +H
Sbjct: 273 ---------------------EMMRETKDSS--PNSVTMVSVLQACASLAALEQGKLIHG 309
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
Y +RR D + V +A++ Y + G + ++VFD+ R +V W ++I++Y HG
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
A+ ++ +ML +G P VT +VL AC+H GLV+E ++F TM +GI+P +E YACMV
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV 429
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG 470
+L RA +L EAAK + +M EP K WG+LL ++G+VE + A LF +EP+++G
Sbjct: 430 DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 471 NYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDE 530
NY+++A++Y+ A W+E RV+K +E G+ K+ G W+E+ ++ +F++ D N ++
Sbjct: 490 NYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQ 549
Query: 531 IYTYLEGLFCMMREEGYILQEE 552
I+ +L L M+E+GYI Q +
Sbjct: 550 IHAFLVKLAEDMKEKGYIPQTK 571
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 17/295 (5%)
Query: 5 YSFNGLYRHL---------LDLFASSVDAGISPDSFTVTSVLKA-IASP-SFSYYKPVKE 53
Y +N L+R L L L+ G+ D FT T VLKA +AS + ++ KE
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 54 AHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF 113
H + RRG + +++ LV Y R G + A VF GMP R+ VSW++MI Y++ G
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 114 YEECKRLYMEML-SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
E R + EM+ P+ VT+VSV+QAC L G +HG++ G++ LP+
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM----EN 228
+A++ MY +CG L+ + +F+ M ++D VS+ S+IS Y +G+ KA +F M +
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNL 282
P T+ +++ E L M + G+KP A + L + L
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL 438
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 39/324 (12%)
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P T ++ CG L + VH + ++G + D L +I MY+ GS+DYAR++
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F++ + R ++ WNAL + E +
Sbjct: 135 FDK----------------------TRKRTIY---------VWNALFRALTLAGHGEEVL 163
Query: 252 DLVREMQGSGLKPNAVT----LASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
L +M G++ + T L + + ++L GKE+HA+ RR Y ++Y+ T +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML--DSGIQP 365
+D YA+ G + A VF R++V W+A+I YA +G A AL + +M+ P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 366 DQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
+ VT+ +VL ACA +++ K+ + + G+ ++ + +V + R GKL +
Sbjct: 284 NSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 426 ISEMPIEPSAKAWGALLNGASVYG 449
M + +W +L++ V+G
Sbjct: 343 FDRMH-DRDVVSWNSLISSYGVHG 365
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 11/232 (4%)
Query: 1 MLIAYSFNG----LYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHC 56
M+ Y+ NG R ++ + D+ SP+S T+ SVL+A AS + + K H
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDS--SPNSVTMVSVLQACAS--LAALEQGKLIHG 309
Query: 57 FVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEE 116
++LRRGL++ + V +ALVT Y RCG++ + ++VFD M +RD VSWNS+I Y G+ ++
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV-NESGIEVDLPLCNAV 175
+++ EML+ G+ P VT VSV+ AC + G + + + GI+ + +
Sbjct: 370 AIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 176 IAMYAKCGSLDYARELFEEM-SEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
+ + + LD A ++ ++M +E +GS++ +G V A R +
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
N LI + + + AI ++ + P+ T I + S+L VH + +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
DQ+ ++AT +I Y+ LG + AR+VFD+ R R++ +W A+ A G LGL
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH---SKYGIQPLVEQYACMVG 411
Y +M G++ D+ T T VL AC S +H ++ G V +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
+ +R G + A+ MP+ + +W A++ + G + +SS N
Sbjct: 226 MYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 472 YIIMAN-LYSCA 482
+ M + L +CA
Sbjct: 285 SVTMVSVLQACA 296
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/558 (30%), Positives = 298/558 (53%), Gaps = 41/558 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY+ G+ + LF+ + +G P S T++LK++ +P + ++ H V+R
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG--RQIHAHVIR 212
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL ++ +E +V Y +CG + A++VFD M + V+ ++ GY+Q G + +L
Sbjct: 213 AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
++++++ G V D V++AC ++L LG ++H V + G+E ++ + ++ Y
Sbjct: 273 FVDLVTEG-VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC S + A F+E+ E +DVS W+A+ISG
Sbjct: 332 KCSSFESACRAFQEIREPNDVS-------------------------------WSAIISG 360
Query: 241 MVQNNWFEGAIDLVREMQGSGLKP-NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
Q + FE A+ + ++ N+ T S S ++ G +VHA AI+R
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ Y +A+I Y+K G + A +VF+ + +V WTA I+ +A +G+AS AL L+ +M+
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
G++P+ VT AVLTAC+H+GLV++ +TM KY + P ++ Y CM+ + +R+G L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA KF+ MP EP A +W L+G + ++E G+ A + L +++PE + Y++ NLY
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ AG+WEEA+ + K M E + K SWI+ G++ FI D + ++ EIY L+
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF- 659
Query: 540 CMMREEGYILQEELDCEM 557
+G++ + C M
Sbjct: 660 -----DGFMEGDMFQCNM 672
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 223/516 (43%), Gaps = 86/516 (16%)
Query: 24 AGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLET-DIFVENALVTCYCRCG 81
AG+S S++ + +A S S+ + + + +R G+E + ++N ++ YC C
Sbjct: 77 AGVSVSSYSYQCLFEACRELRSLSHGRLLHDR----MRMGIENPSVLLQNCVLQMYCECR 132
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVM 141
+ A K+FD M E + VS +MI Y++ G ++ L+ ML+ G P + +++
Sbjct: 133 SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLL 191
Query: 142 QACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV 201
++ + L G ++H V +G+ + + ++ MY KCG L A+ +F++M+ K V
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
+ ++ GY G +ARD + +DLV E G
Sbjct: 252 ACTGLMVGYTQAG---RARDALKLF------------------------VDLVTE----G 280
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
++ ++ + + + L GK++HA + + + V T ++D Y K A
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 322 QVFDQARSRSLVIWTAIITAY------------------------------------AAH 345
+ F + R + V W+AII+ Y +
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
D ++ ++A + + Q +A++T + G +D+A ++F +M + P +
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN-----PDIVA 455
Query: 406 YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHL- 461
+ + + G SEA + +M ++P++ + A+L S G VE GK D +
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 462 --FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
+ + P + +Y M ++Y+ +G +EA + K M
Sbjct: 516 RKYNVAP-TIDHYDCMIDIYARSGLLDEALKFMKNM 550
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 274/510 (53%), Gaps = 4/510 (0%)
Query: 46 SYYKPVKEAHCFVLRRGLETDIF-VENALVTCYCRCGE--IGLARKVFDGMPERDTVSWN 102
S + +K+ H +L+ GL D + + L C + A+ VFDG DT WN
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE 162
MI G+S E LY ML S + T S+++AC ++H + +
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRML-CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Query: 163 SGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDV 222
G E D+ N++I YA G+ A LF+ + E DDVS+ S+I GY+ G + A +
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 223 FRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
FR M +W +ISG VQ + + A+ L EMQ S ++P+ V+LA+ + + L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAY 342
GK +H+Y + + + +ID YAK G + A +VF + +S+ WTA+I+ Y
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPL 402
A HG A+ + +M GI+P+ +T TAVLTAC+++GLV+E IF +M Y ++P
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 403 VEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLF 462
+E Y C+V +L RAG L EA +FI EMP++P+A WGALL ++ ++E G+ + L
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 463 EIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKD 522
I+P G Y+ AN+++ +W++A+ R+ M+E GV K+ G S I + G F+A D
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 503
Query: 523 VSNERSDEIYTYLEGLFCMMREEGYILQEE 552
S+ ++I + + + E GY+ + E
Sbjct: 504 RSHPEIEKIQSKWRIMRRKLEENGYVPELE 533
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 69/356 (19%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
+++T S+LKA ++ S ++ + H + + G E D++ N+L+ Y G LA
Sbjct: 114 NAYTFPSLLKACSN--LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHL 171
Query: 89 VFDGMPERDTVSWNS-------------------------------MIGGYSQCGFYEEC 117
+FD +PE D VSWNS MI GY Q +E
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEA 231
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
+L+ EM + V PD V++ + + AC Q L G +H ++N++ I +D L +I
Sbjct: 232 LQLFHEMQN-SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MYAKCG ++ A E+F+ + +K ++ ++ISGY +G G E
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG---------HGRE---------- 331
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
AI EMQ G+KPN +T + + SY + GK + Y++ R Y
Sbjct: 332 ------------AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDY 378
Query: 298 DQNIYVAT--AIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDASL 350
+ + I+D + G + A++ + + + VIW A++ A H + L
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 278/548 (50%), Gaps = 35/548 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y +GLY + LF +G P FT + VLKA+ + ++ H +
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG--LHDFALGQQLHALSVT 278
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D V N ++ Y + + R +FD MPE D VS+N +I YSQ YE
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ EM +G +++ L +G ++H + + L + N+++ MYA
Sbjct: 339 FREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC E+FEE A +F+ + +W ALISG
Sbjct: 398 KC-------EMFEE------------------------AELIFKSLPQRTTVSWTALISG 426
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
VQ + L +M+GS L+ + T A+ + + F++L GK++HA+ IR +N
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
++ + ++D YAK G I A QVF++ R+ V W A+I+A+A +GD A+G +A+M++
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
SG+QPD V++ VLTAC+H G V++ + F M YGI P + YACM+ +L R G+ +
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEP-ESSGNYIIMANLY 479
EA K + EMP EP W ++LN ++ + + A + LF +E + Y+ M+N+Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ AG WE+ V+K M E G+ K+ SW+E++ ++ F + D ++ DEI + L
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 540 CMMREEGY 547
+ EGY
Sbjct: 727 AEIEREGY 734
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 211/467 (45%), Gaps = 59/467 (12%)
Query: 28 PDSFTVTSVLKAI--ASPSFSYYKPVKEAHCFVLRRGLETDIF--VENALVTCYCRCGEI 83
PD T T++L A P V + H F ++ G +T+ F V N L+ YC +
Sbjct: 145 PDHVTFTTLLPGCNDAVPQ----NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 84 GLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
LA +F+ +PE+D+V++N++I GY + G Y E L+++M G P T V++A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKA 259
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
D LG ++H +G D + N ++ Y+K + R LF+EM E D VSY
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
+IS Y Q + +E ++ REMQ G
Sbjct: 320 NVVISSY-------------------------------SQADQYEASLHFFREMQCMGFD 348
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
A+ + + + S+L+ G+++H A+ D ++V +++D YAK A +
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH--SG 381
F R+ V WTA+I+ Y G L L+ +M S ++ DQ T VL A A S
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 382 LVDEAWKIF----NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
L+ + F + + + LV+ YA + G + +A + EMP + +A +
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYA-------KCGSIKDAVQVFEEMP-DRNAVS 520
Query: 438 WGALLNGASVYGDVETGKFACDHLFE--IEPESSGNYIIMANLYSCA 482
W AL++ + GD E A + E ++P+S I+ L +C+
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS---ILGVLTACS 564
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 160/379 (42%), Gaps = 65/379 (17%)
Query: 35 SVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP 94
+ L+ + PS + + + +++ G +TD N +V R G++ ARKV+D MP
Sbjct: 16 ATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP 75
Query: 95 ERDTVSWNSMIGGYSQCG-------------------------------FYEECKRLYME 123
++TVS N+MI G+ + G ++E +L+ +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 124 MLSVGS-VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD--LPLCNAVIAMYA 180
M S +PD VT +++ C + +VH F + G + + L + N ++ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
+ LD A LFEE+ EKD V++ ++I+GY E GL
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGY----------------EKDGL--------- 230
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ +I L +M+ SG +P+ T + + + G+++HA ++ + ++
Sbjct: 231 ------YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
V I+D Y+K + R +FD+ V + +I++Y+ +L + +M
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 361 SGIQPDQVTLTAVLTACAH 379
G +L+ A+
Sbjct: 345 MGFDRRNFPFATMLSIAAN 363
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 285/519 (54%), Gaps = 34/519 (6%)
Query: 33 VTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDG 92
VT +L A A + + ++ H FV + E I + N+L+ Y RCG + + VF
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 93 MPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVL 152
M ERD VSWN+MI + Q G +E L EM G + D +T+ +++ A ++ +
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI-DYITVTALLSAASNLRNKEI 437
Query: 153 GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMA 212
G + H F+ GI+ + + + +I MY+K G + +++LFE SGY
Sbjct: 438 GKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG-------------SGY-- 481
Query: 213 YGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
RD TWN++ISG QN E + R+M ++PNAVT+AS
Sbjct: 482 -----AERD---------QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
+P S ++ GK++H ++IR+ DQN++VA+A++D Y+K G I A +F Q + R+
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 333 VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNT 392
V +T +I Y HG A+ L+ M +SGI+PD +T AVL+AC++SGL+DE KIF
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 393 MHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS-AKAWGALLNGASVYGDV 451
M Y IQP E Y C+ +L R G+++EA +F+ + E + A+ WG+LL ++G++
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 452 ETGKFACDHL--FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
E + + L F+ SG ++++N+Y+ +W+ +VR+ M E G+ K G S I
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Query: 510 EMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
E++G + F+++D + S EIY ++GL MR + ++
Sbjct: 768 EIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFL 806
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 253/533 (47%), Gaps = 77/533 (14%)
Query: 43 PSFSYYKPVKEAHCF---VLRRGLE--TDIFVENALVTCYCRCGEIGLARKVFDGMPERD 97
P+ S + +K+A+ F +L+ G E D+FV ++ ++ Y G+I +R+VFD ER+
Sbjct: 222 PAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN 281
Query: 98 TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVH 157
WN+MIG Y Q E L++E + +V D VT + A + + LG + H
Sbjct: 282 IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 158 GFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVV 217
GFV+++ E+ + + N+++ MY++CGS+ + +F M E+D VS
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS--------------- 386
Query: 218 KARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
WN +IS VQN + + LV EMQ G K + +T+ + + S
Sbjct: 387 ----------------WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 278 YFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA--RSRSLVIW 335
N GK+ HA+ IR+ Q + + +ID Y+K G I ++++F+ + R W
Sbjct: 431 NLRNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
++I+ Y +G ++ +ML+ I+P+ VT+ ++L AC+ G VD ++
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGK 455
+Y Q + A +V + S+AG + A S+ E ++ + ++ G YG G+
Sbjct: 550 QYLDQNVFVASA-LVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILG---YGQHGMGE 604
Query: 456 FACDHLFE-----IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS--- 507
A I+P++ ++ + + S +G +E ++ + M E V+ I+ SS
Sbjct: 605 RAISLFLSMQESGIKPDAI-TFVAVLSACSYSGLIDEGLKIFEEMRE--VYNIQPSSEHY 661
Query: 508 --WIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEELDCEMW 558
+M GR+ R +E Y +++GL EEG I E+W
Sbjct: 662 CCITDMLGRV----------GRVNEAYEFVKGL----GEEGNI------AELW 694
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 177/359 (49%), Gaps = 46/359 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ A+ NGL L L G D TVT++L A+ + + K+ H F++R
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS--AASNLRNKEIGKQTHAFLIR 447
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFD--GMPERDTVSWNSMIGGYSQCGFYEECK 118
+G++ + + + L+ Y + G I +++K+F+ G ERD +WNSMI GY+Q G E+
Sbjct: 448 QGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
++ +ML ++ P+ VT+ S++ AC Q + LG ++HGF ++ ++ + +A++ M
Sbjct: 507 LVFRKMLE-QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDM 565
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
Y+K G++ YA ++F + E++ V+Y ++I GY +G
Sbjct: 566 YSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGM----------------------- 602
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
E AI L MQ SG+KP+A+T + + SY + G ++ +R Y
Sbjct: 603 --------GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE-EMREVY- 652
Query: 299 QNIYVAT----AIIDTYAKLGFIHGARQVFDQARSRSLV--IWTAIITAYAAHGDASLA 351
NI ++ I D ++G ++ A + + +W +++ + HG+ LA
Sbjct: 653 -NIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 215/501 (42%), Gaps = 82/501 (16%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRC------GE 82
D++T +S LKA A K K HC ++R + V N+L+ Y C E
Sbjct: 106 DAYTYSSTLKACAETK--NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ RKVFD M ++ V+WN++I Y + G E R + M+ + V P V+ V+V
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFP 222
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEV--DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
A S+ + +G + + G E DL + ++ I+MYA+ G ++ +R +F+ E++
Sbjct: 223 AVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN- 281
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
++ WN +I VQN+ +I+L E GS
Sbjct: 282 ------------------------------IEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 261 G-LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
+ + VT S + G++ H + + + I + +++ Y++ G +H
Sbjct: 312 KEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHK 371
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA- 378
+ VF R R +V W +I+A+ +G L L +M G + D +T+TA+L+A +
Sbjct: 372 SFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Query: 379 ----------HSGLVDEAWKI--FNT----MHSKYGI----QPLVE----------QYAC 408
H+ L+ + + N+ M+SK G+ Q L E +
Sbjct: 432 LRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 409 MVGVLSRAGKLSEA---AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIE 465
M+ ++ G + + + E I P+A ++L S G V+ GK H F I
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL--HGFSIR 549
Query: 466 PESSGNYII---MANLYSCAG 483
N + + ++YS AG
Sbjct: 550 QYLDQNVFVASALVDMYSKAG 570
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 160/377 (42%), Gaps = 43/377 (11%)
Query: 78 CRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP-DGVT 136
C+ G LAR++FD +P+ TV WN++I G+ E Y M D T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS------LDYARE 190
S ++AC ++K+L G VH + + N+++ MY C + D R+
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F+ M K+ V++ ++IS Y+ G +A F G+
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQF------GI------------------- 204
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC--YDQNIYVATAII 308
M +KP+ V+ + P S +++ + ++ Y ++++V ++ I
Sbjct: 205 ------MMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAI 258
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQ 367
YA+LG I +R+VFD R++ +W +I Y + ++ L+ + + S I D+
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
VT +A + V+ + + + P+V + MV + SR G + ++
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFL 377
Query: 428 EMPIEPSAKAWGALLNG 444
M E +W +++
Sbjct: 378 SMR-ERDVVSWNTMISA 393
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 219 ARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN--AVTLASTIPLF 276
AR +F + P WN +I G + NN A+ M+ + N A T +ST+
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY-----AKLGFIHGA-RQVFDQARSR 330
+ NL+ GK VH + IR + + V ++++ Y A F + R+VFD R +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
++V W +I+ Y G + A + M+ ++P V+ V A + S + +A +F
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA-NVF 236
Query: 391 NTMHSKYGIQPLVEQY--ACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVY 448
+ K G + + + + + + + + G + E+++ + + +E + + W ++ G V
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDI-ESSRRVFDSCVERNIEVWNTMI-GVYVQ 294
Query: 449 GD 450
D
Sbjct: 295 ND 296
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 292/538 (54%), Gaps = 5/538 (0%)
Query: 1 MLIAYSFNGLYRHLLDLFASSV-DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ Y+ + +DLF V D ++P+S T+ V+ A A + ++ + F+
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK--LEDLETGEKVYAFIR 263
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G+E + + +ALV Y +C I +A+++FD + N+M Y + G E
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ M+ G V PD ++++S + +C Q ++++ G HG+V +G E +CNA+I MY
Sbjct: 324 VFNLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KC D A +F+ MS K V++ SI++GY+ G V A + F M + +WN +IS
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 240 GMVQNNWFEGAIDLVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
G+VQ + FE AI++ MQ G+ + VT+ S + L K ++ Y +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
++ + T ++D +++ G A +F+ +R + WTA I A A G+A A+ L+ M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 359 LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
++ G++PD V LTAC+H GLV + +IF +M +G+ P Y CMV +L RAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
L EA + I +MP+EP+ W +LL V G+VE +A + + + PE +G+Y++++N+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
Y+ AGRW + ++VR M+E G+ K G+S I++ G+ F + D S+ I L+
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 46/460 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ +GL + LF +++GISPD +T L A A S + + + H +++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGNGI-QIHGLIVK 162
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D+FV+N+LV Y CGE+ ARKVFD M ER+ VSW SMI GY++ F ++ L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M+ V P+ VT+V V+ AC + +DL G +V+ F+ SGIEV+ + +A++ MY
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC ++D A+ LF+E YG+ LD NA+ S
Sbjct: 283 KCNAIDVAKRLFDE--------YGA-----------------------SNLDLCNAMASN 311
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
V+ A+ + M SG++P+ +++ S I S N+ GK H Y +R ++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ A+ID Y K A ++FD+ ++++V W +I+ Y +G+ A + M +
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
I V+ +++ L +EA ++F +M S+ G+ M+ + S G L
Sbjct: 432 KNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA---DGVTMMSIASACGHLG 484
Query: 421 --EAAK----FISEMPIEPSAKAWGALLNGASVYGDVETG 454
+ AK +I + I+ + L++ S GD E+
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 177/359 (49%), Gaps = 39/359 (10%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFVENALVTCYCRCG--- 81
P + KA S S K + E F + ++GL+ D+ LV C G
Sbjct: 23 PSLLNQSKCTKATPS-SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE 81
Query: 82 EIGLARKVFDGMPERDTV-SWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
+ A++VF+ T +NS+I GY+ G E L++ M++ G + PD T
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSG-ISPDKYTFPFG 140
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
+ AC +S+ G+++HG + + G DL + N+++ YA+CG LD AR++F+EMSE++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
VS+ S+I GY F A D+F R ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRDE 230
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
+ PN+VT+ I + +L G++V+A+ + N + +A++D Y K I A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
+++FD+ + +L + A+ + Y G ALG++ M+DSG++PD++++ + +++C+
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGF---IHGARQVFDQARSR-SLVIWTAIITA 341
K H ++ D ++ T ++ +LG + A++VF+ + S + ++ ++I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
YA+ G + A+ L+ +M++SGI PD+ T L+ACA S +I + +
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
L Q + +V + G+L A K EM E + +W +++ G Y + K A D
Sbjct: 169 LFVQNS-LVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAKDAVDLF 223
Query: 462 FEI--EPESSGNYIIMANLYSCAGRWEE 487
F + + E + N + M + S + E+
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLED 251
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 292/538 (54%), Gaps = 5/538 (0%)
Query: 1 MLIAYSFNGLYRHLLDLFASSV-DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ Y+ + +DLF V D ++P+S T+ V+ A A + ++ + F+
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK--LEDLETGEKVYAFIR 263
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G+E + + +ALV Y +C I +A+++FD + N+M Y + G E
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ M+ G V PD ++++S + +C Q ++++ G HG+V +G E +CNA+I MY
Sbjct: 324 VFNLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KC D A +F+ MS K V++ SI++GY+ G V A + F M + +WN +IS
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 240 GMVQNNWFEGAIDLVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
G+VQ + FE AI++ MQ G+ + VT+ S + L K ++ Y +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
++ + T ++D +++ G A +F+ +R + WTA I A A G+A A+ L+ M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 359 LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
++ G++PD V LTAC+H GLV + +IF +M +G+ P Y CMV +L RAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
L EA + I +MP+EP+ W +LL V G+VE +A + + + PE +G+Y++++N+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
Y+ AGRW + ++VR M+E G+ K G+S I++ G+ F + D S+ I L+
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 46/460 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ +GL + LF +++GISPD +T L A A S + + + H +++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGNGI-QIHGLIVK 162
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D+FV+N+LV Y CGE+ ARKVFD M ER+ VSW SMI GY++ F ++ L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M+ V P+ VT+V V+ AC + +DL G +V+ F+ SGIEV+ + +A++ MY
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC ++D A+ LF+E YG+ LD NA+ S
Sbjct: 283 KCNAIDVAKRLFDE--------YGA-----------------------SNLDLCNAMASN 311
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
V+ A+ + M SG++P+ +++ S I S N+ GK H Y +R ++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ A+ID Y K A ++FD+ ++++V W +I+ Y +G+ A + M +
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
I V+ +++ L +EA ++F +M S+ G+ M+ + S G L
Sbjct: 432 KNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA---DGVTMMSIASACGHLG 484
Query: 421 --EAAK----FISEMPIEPSAKAWGALLNGASVYGDVETG 454
+ AK +I + I+ + L++ S GD E+
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 177/359 (49%), Gaps = 39/359 (10%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFVENALVTCYCRCG--- 81
P + KA S S K + E F + ++GL+ D+ LV C G
Sbjct: 23 PSLLNQSKCTKATPS-SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE 81
Query: 82 EIGLARKVFDGMPERDTV-SWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
+ A++VF+ T +NS+I GY+ G E L++ M++ G + PD T
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSG-ISPDKYTFPFG 140
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
+ AC +S+ G+++HG + + G DL + N+++ YA+CG LD AR++F+EMSE++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
VS+ S+I GY F A D+F R ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRDE 230
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
+ PN+VT+ I + +L G++V+A+ + N + +A++D Y K I A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH 379
+++FD+ + +L + A+ + Y G ALG++ M+DSG++PD++++ + +++C+
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGF---IHGARQVFDQARSR-SLVIWTAIITA 341
K H ++ D ++ T ++ +LG + A++VF+ + S + ++ ++I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
YA+ G + A+ L+ +M++SGI PD+ T L+ACA S +I + +
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
L Q + +V + G+L A K EM E + +W +++ G Y + K A D
Sbjct: 169 LFVQNS-LVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAKDAVDLF 223
Query: 462 FEI--EPESSGNYIIMANLYSCAGRWEEASRVRK-----RMEEIGVHKIRGSSWIEM 511
F + + E + N + M + S + E+ K R I V+ + S+ ++M
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 279/546 (51%), Gaps = 34/546 (6%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
N L+ LDLF S G+ FT VLKA S K + H V++ G D+
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRA--SSRKLGIDLHSLVVKCGFNHDV 146
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+L++ Y G + A K+FD +P+R V+W ++ GY+ G + E L+ +M+ +
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G V PD IV V+ AC DL G + ++ E ++ + + ++ +YAKCG ++
Sbjct: 207 G-VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
AR +F+ M EKD V++ ++I GY + N++
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYAS-------------------------------NSFP 294
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
+ I+L +M LKP+ ++ + + L G+ + R + N+++A A+
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
ID YAK G + +VF + + + +VI A I+ A +G L+ ++ Q GI PD
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
T +L C H+GL+ + + FN + Y ++ VE Y CMV + RAG L +A + I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEE 487
+MP+ P+A WGALL+G + D + + L +EP ++GNY+ ++N+YS GRW+E
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 488 ASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
A+ VR M + G+ KI G SWIE+ G++ F+A D S+ SD+IY LE L MR G+
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGF 594
Query: 548 ILQEEL 553
+ E
Sbjct: 595 VPTTEF 600
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 156/334 (46%), Gaps = 32/334 (9%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
+K+ H ++ L D F+ N L+ + + +F + +NS+I G+
Sbjct: 29 LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
+ E L++ + G + G T V++AC ++ LG+++H V + G D+
Sbjct: 89 NHLFHETLDLFLSIRKHG-LYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+++++Y+ G L+ A +LF+E+ ++ V++ ++ SGY G + R+
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG---RHRE--------- 195
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
AIDL ++M G+KP++ + + + +L G+ +
Sbjct: 196 -------------------AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
Y +N +V T +++ YAK G + AR VFD + +V W+ +I YA++
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
+ L+ QML ++PDQ ++ L++CA G +D
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 67/410 (16%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPS--------FSYYKPVKEAH 55
Y+ +G +R +DLF V+ G+ PDS+ + VL A Y + ++
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME--- 242
Query: 56 CFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYE 115
++ + FV LV Y +CG++ AR VFD M E+D V+W++MI GY+ F +
Sbjct: 243 -------MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 116 ECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAV 175
E L+++ML ++ PD +IV + +C L LG ++ +L + NA+
Sbjct: 296 EGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 176 IAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL---- 231
I MYAKCG++ E+F+EM EKD V + ISG G V + VF E G+
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
T+ L+ G V +GL + + + I Y
Sbjct: 415 STFLGLLCGCVH----------------AGLIQDGLRFFNAISC--------------VY 444
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGA-RQVFDQARSRSLVIWTAIITAYAAHGDASL 350
A++R + ++D + + G + A R + D + ++W A+++ D L
Sbjct: 445 ALKRTVEH----YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 351 ALGLYAQMLDSGIQP----DQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
A + +++ ++P + V L+ + + G DEA ++ + M+ K
Sbjct: 501 AETVLKELI--ALEPWNAGNYVQLSNIYSV---GGRWDEAAEVRDMMNKK 545
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN 281
+F + P + +N+LI+G V N+ F +DL ++ GL + T + + S+
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
+ G ++H+ ++ ++ ++ T+++ Y+ G ++ A ++FD+ RS+V WTA+ +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
Y G A+ L+ +M++ G++PD + VL+AC H G +D I M + +Q
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQK 245
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+V + ++ GK+ +A M +E W ++ G
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 7/238 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ N + ++LF + + PD F++ L + A S + + R
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA--SLGALDLGEWGISLIDR 341
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
T++F+ NAL+ Y +CG + +VF M E+D V N+ I G ++ G + +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN-ESGIEVDLPLCNAVIAMY 179
+ + +G + PDG T + ++ C + + G+ ++ ++ + ++ ++
Sbjct: 402 FGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 180 AKCGSLDYARELFEEMSEKDD-VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
+ G LD A L +M + + + +G+++SG A V + E L+ WNA
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK--ELIALEPWNA 516
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 268/485 (55%), Gaps = 22/485 (4%)
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECK-----RLYMEMLSVGSVVPDGVT 136
++ A K+F+ MP+R+ SWN++I G+S+ +E K L+ EM+S V P+ T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSES---DEDKALIAITLFYEMMSDEFVEPNRFT 130
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF-EEM 195
SV++AC ++ + G ++HG + G D + + ++ MY CG + AR LF + +
Sbjct: 131 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 196 SEKDDVS-------------YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
EKD V + +I GYM G AR +F M + +WN +ISG
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
N +F+ A+++ REM+ ++PN VTL S +P S +L G+ +H YA +
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ +A+ID Y+K G I A VF++ +++ W+A+I +A HG A A+ + +M +G
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
++P V +LTAC+H GLV+E + F+ M S G++P +E Y CMV +L R+G L EA
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
+FI MPI+P W ALL + G+VE GK + L ++ P SG Y+ ++N+Y+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMM 542
G W E S +R RM+E + K G S I++ G L F+ +D S+ ++ EI + L + +
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 543 REEGY 547
R GY
Sbjct: 551 RLAGY 555
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 9/215 (4%)
Query: 25 GISPDSFTVTSVLKAIASPSFS------YYKPVKEAHCFVL--RRGLETDIFVENALVTC 76
G D F ++++++ F +YK + E V+ RR + +I + N ++
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y R G+ AR +FD M +R VSWN+MI GYS GF+++ ++ EM G + P+ VT
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKGDIRPNYVT 276
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
+VSV+ A + L LG +H + +SGI +D L +A+I MY+KCG ++ A +FE +
Sbjct: 277 LVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
++ +++ ++I+G+ +G A D F M G+
Sbjct: 337 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS NG ++ +++F I P+ T+ SVL AI+ + + H +
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAIS--RLGSLELGEWLHLYAED 302
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G+ D + +AL+ Y +CG I A VF+ +P + ++W++MI G++ G +
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG-FVNESGIEVDLPLCNAVIAMY 179
+ +M G V P V ++++ AC + G V+ G+E + ++ +
Sbjct: 363 FCKMRQAG-VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 180 AKCGSLDYARELFEEMSEK-DDVSYGSIISGYMAYGFVVKARDV 222
+ G LD A E M K DDV + +++ G V + V
Sbjct: 422 GRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 280/546 (51%), Gaps = 34/546 (6%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
NGL + LF + G+ PD +T+TSVLKA AS K+ H ++ +D
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA-ASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
FV AL+ Y R + A +F+ D V+WN+M+ GY+Q + +L+ M
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G D T+ +V + CG + G +VH + +SG ++DL + + ++ MY KCG +
Sbjct: 512 GER-SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
A+ F+ + DDV+ W +ISG ++N
Sbjct: 571 AQFAFDSIPVPDDVA-------------------------------WTTMISGCIENGEE 599
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E A + +M+ G+ P+ T+A+ S + L G+++HA A++ + +V T++
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSL 659
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
+D YAK G I A +F + ++ W A++ A HG+ L L+ QM GI+PD+
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
VT VL+AC+HSGLV EA+K +MH YGI+P +E Y+C+ L RAG + +A I
Sbjct: 720 VTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEE 487
M +E SA + LL V GD ETGK L E+EP S Y++++N+Y+ A +W+E
Sbjct: 780 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 839
Query: 488 ASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
R M+ V K G SWIE+ ++ F+ D SN +++ IY ++ + +++EGY
Sbjct: 840 MKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGY 899
Query: 548 ILQEEL 553
+ + +
Sbjct: 900 VPETDF 905
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 208/452 (46%), Gaps = 42/452 (9%)
Query: 2 LIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVL-KAIASPSFSYYKPVKEAHCFVLR 60
L Y +G Y LL FA V++ + D T +L A+ S + + V HC L+
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV---HCMALK 343
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL+ + V N+L+ YC+ + G AR VFD M ERD +SWNS+I G +Q G E L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQ-SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+M++L G + PD T+ SV++A + L L +VH + D + A+I Y
Sbjct: 404 FMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
++ + A LFE N L WNA+++
Sbjct: 463 SRNRCMKEAEILFER--------------------------------HNFDLVAWNAMMA 490
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G Q++ + L M G + + TLA+ + + GK+VHAYAI+ YD
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+++V++ I+D Y K G + A+ FD V WT +I+ +G+ A +++QM
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIF-NTMHSKYGIQPLVEQYACMVGVLSRAGK 418
G+ PD+ T+ + A + +++ +I N + P V +V + ++ G
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGS 668
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
+ +A + + + AW A+L G + +G+
Sbjct: 669 IDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K H +L + F+ N L++ Y +CG + AR+VFD MP+RD VSWNS++ Y+Q
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 112 G--FYEECKRLYM--EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
E ++ ++ +L V +T+ +++ C S + HG+ + G++
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
D + A++ +Y K G + + LFEEM +D V + ++ Y+ GF +A D+
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 228 NPGLDT--------------------------------------WNALISGMVQNNWFEG 249
+ GL+ N +S + + +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
+ +M S ++ + VT + +L G++VH A++ D + V+ ++I+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y KL AR VFD R L+ W ++I A +G A+ L+ Q+L G++PDQ T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 370 LTAVLTACA 378
+T+VL A +
Sbjct: 419 MTSVLKAAS 427
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 156/353 (44%), Gaps = 38/353 (10%)
Query: 102 NSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN 161
N + Y G Y + + +M+ V D VT + ++ + L LG +VH
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVE-SDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARD 221
+ G+++ L + N++I MY K +AR +F+ MSE+D
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD---------------------- 380
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN 281
L +WN++I+G+ QN A+ L ++ GLKP+ T+ S + S
Sbjct: 381 ---------LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 282 -LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
L K+VH +AI+ + +V+TA+ID Y++ + A +F++ + LV W A++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMA 490
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN-TMHSKYGI 399
Y D L L+A M G + D TL V C +++ ++ + S Y +
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
V + ++ + + G +S A +P+ P AW +++G G+ E
Sbjct: 551 DLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE 600
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
S DL+LG H + + L N +I+MY+KCGSL YA
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYA------------------ 93
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW-----FEGAIDLVREMQGSG 261
R VF M + L +WN++++ Q++ + A L R ++
Sbjct: 94 -------------RRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
+ + +TL+ + L + + + H YA + D + +VA A+++ Y K G + +
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 200
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
+F++ R +V+W ++ AY G A+ L + SG+ P+++TL
Sbjct: 201 VLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 275/521 (52%), Gaps = 38/521 (7%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
+ A ++ D+ T +L + P F +K+ H VL+ GL+ +I + NA+++ Y CG
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFC--NLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 82 EIGLARKVFDGMP-ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
+ A++VFDG+ +D +SWNSMI G+S+ E L+++M V D T +
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGL 311
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK--CGSLDYARELFEEMSEK 198
+ AC + + G +HG V + G+E NA+I+MY + G+++ A LFE + K
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ 258
D +S WN++I+G Q E A+ ++
Sbjct: 372 DLIS-------------------------------WNSIITGFAQKGLSEDAVKFFSYLR 400
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
S +K + ++ + S + L+ G+++HA A + + N +V +++I Y+K G I
Sbjct: 401 SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIE 460
Query: 319 GARQVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
AR+ F Q S+ S V W A+I YA HG ++L L++QM + ++ D VT TA+LTAC
Sbjct: 461 SARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
+H+GL+ E ++ N M Y IQP +E YA V +L RAG +++A + I MP+ P
Sbjct: 521 SHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMV 580
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEE 497
L G++E +HL EIEPE Y+ ++++YS +WEE + V+K M+E
Sbjct: 581 LKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Query: 498 IGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
GV K+ G SWIE+ ++ AF A+D SN +IY ++ L
Sbjct: 641 RGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 172/334 (51%), Gaps = 36/334 (10%)
Query: 48 YKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGG 107
++ + HC+ ++ G +DI+V N ++ Y + G +G A +FD MP+RD+VSWN+MI G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 108 YSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
Y+ CG E+ L+ M GS V DG + +++ K LG +VHG V + G E
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDV-DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
++ + ++++ MYAKC ++ A E F+E+SE + VS+ ++I+G+ V+ RD+
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF------VQVRDIKTAF- 187
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS--YFSNLRGG 285
W G +++ + + +A T A + L F NL
Sbjct: 188 ------------------WLLGLMEM-----KAAVTMDAGTFAPLLTLLDDPMFCNLL-- 222
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD-QARSRSLVIWTAIITAYAA 344
K+VHA ++ I + A+I +YA G + A++VFD S+ L+ W ++I ++
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
H A L+ QM ++ D T T +L+AC+
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 144/296 (48%), Gaps = 11/296 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +S + L +LF + D +T T +L A + + K H V++
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFG--KSLHGMVIK 333
Query: 61 RGLETDIFVENALVTCYCR--CGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECK 118
+GLE NAL++ Y + G + A +F+ + +D +SWNS+I G++Q G E+
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
+ + L + D +++++C L LG ++H +SG + + +++I M
Sbjct: 394 KFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 179 YAKCGSLDYARELFEEMSEKDD-VSYGSIISGYMAYGFVVKARDVFRGM--ENPGLD--T 233
Y+KCG ++ AR+ F+++S K V++ ++I GY +G + D+F M +N LD T
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEV 288
+ A+++ + ++L+ M+ ++P A+ + L + KE+
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 289/545 (53%), Gaps = 41/545 (7%)
Query: 3 IAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG 62
+ + F L HL ++ + V P+ + S LKA +S Y + H ++
Sbjct: 247 LGFEFEAL-SHLKEMLSFGV---FHPNEYIFGSSLKACSSLLRPDYG--SQIHGLCIKSE 300
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
L + +L Y RCG + AR+VFD + DT SWN +I G + G+ +E ++
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVL--GMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+M S G +PD +++ S++ C Q+K + L GM++H ++ + G DL +CN+++ MY
Sbjct: 361 QMRSSG-FIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYT 417
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
C L LFE+ FR N +WN +++
Sbjct: 418 FCSDLYCCFNLFED----------------------------FRN--NADSVSWNTILTA 447
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+Q+ + L + M S +P+ +T+ + + S+L+ G +VH Y+++
Sbjct: 448 CLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPE 507
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
++ +ID YAK G + AR++FD +R +V W+ +I YA G AL L+ +M
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
+GI+P+ VT VLTAC+H GLV+E K++ TM +++GI P E +C+V +L+RAG+L+
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
EA +FI EM +EP W LL+ G+V + A +++ +I+P +S ++++ ++++
Sbjct: 628 EAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHA 687
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
+G WE A+ +R M++ V KI G SWIE+ ++ F A+D+ + D+IYT L ++
Sbjct: 688 SSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWS 747
Query: 541 MMREE 545
M +E
Sbjct: 748 QMLDE 752
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 156/325 (48%), Gaps = 31/325 (9%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
++ H +L + D + N +++ Y +CG + AR+VFD MPER+ VS+ S+I GYSQ
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQN 146
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G E RLY++ML +VPD S+++AC S D+ LG ++H V + L
Sbjct: 147 GQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
NA+IAMY + + A +F + KD +S+ SII+G+ GF +A + M + G+
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
PN S++ S G ++H
Sbjct: 266 ------------------------------FHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
I+ N ++ D YA+ GF++ AR+VFDQ W II A +G A A
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTA 376
+ +++QM SG PD ++L ++L A
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 206/455 (45%), Gaps = 46/455 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ YS NG + L+ + + PD F S++KA AS S K+ H V++
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG--KQLHAQVIK 196
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ + +NAL+ Y R ++ A +VF G+P +D +SW+S+I G+SQ GF E
Sbjct: 197 LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
EMLS G P+ S ++AC G ++HG +S + + ++ MYA
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
+CG L+ AR +F+++ D S+ II+G
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAG------------------------------- 345
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ N + + A+ + +M+ SG P+A++L S + + L G ++H+Y I+ + +
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD 405
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIWTAIITAYAAHGDASLALGLYAQML 359
+ V +++ Y ++ +F+ R+ + V W I+TA H L L+ ML
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML 465
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQY--ACMVGVLS 414
S +PD +T+ +L C + K+ + +H K G+ P EQ+ ++ + +
Sbjct: 466 VSECEPDHITMGNLLRGCVEIS----SLKLGSQVHCYSLKTGLAP--EQFIKNGLIDMYA 519
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+ G L +A + M +W L+ G + G
Sbjct: 520 KCGSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSG 553
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 235 NALISGMVQNNWFEGAIDLVREMQ-GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
N I+ + ++N++ A++ Q S K T S I S +L G+++H + +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALG 353
+ + I+ Y K G + AR+VFD R+LV +T++IT Y+ +G + A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL 413
LY +ML + PDQ +++ ACA S V ++ + L+ Q A ++ +
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA-LIAMY 213
Query: 414 SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
R ++S+A++ +P++ +W +++ G S G
Sbjct: 214 VRFNQMSDASRVFYGIPMK-DLISWSSIIAGFSQLG 248
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 283/518 (54%), Gaps = 21/518 (4%)
Query: 46 SYYKPVKEAHCFVLRRGLET--DIFVENALVTCYCRCGEIGLARKVFDGMP--ERDTVSW 101
S+ +P KE H + GL+ ++ NAL Y GE+ A+K+FD +P E+D V W
Sbjct: 20 SFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDW 79
Query: 102 NSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN 161
+++ +S+ G +L++EM V D V++V + C + +DL + HG
Sbjct: 80 TTLLSSFSRYGLLVNSMKLFVEMRR-KRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARD 221
+ G+ + +CNA++ MY KCG + + +FEE+ EK VS+ ++ + + + + R+
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ---GSGLKPNAVTLASTIPLFSY 278
VF M W +++G + + ++L+ EM G GL N VTL S + +
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQ 256
Query: 279 FSNLRGGKEVHAYAIRR--------CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR 330
NL G+ VH YA+++ YD ++ V TA++D YAK G I + VF R R
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
++V W A+ + A HG + + ++ QM+ ++PD +T TAVL+AC+HSG+VDE W+ F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
+++ YG++P V+ YACMV +L RAG + EA + EMP+ P+ G+LL SV+G
Sbjct: 375 HSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK 433
Query: 451 VETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
VE + L ++ P ++ I+M+N+Y GR + A +R + + G+ KI G S I
Sbjct: 434 VEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIY 493
Query: 511 MSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
++ + F + D S+ R+ EIY L + +R GY+
Sbjct: 494 VNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYV 531
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 275/493 (55%), Gaps = 6/493 (1%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
K +K++HC+++ GL D + G + A VF P +T N+MI
Sbjct: 29 KTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRAL 88
Query: 109 S---QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
S + + +Y ++ ++ PD T V++ + D+ G ++HG V G
Sbjct: 89 SLLDEPNAHSIAITVYRKLWAL-CAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
+ + + +I MY CG L AR++F+EM KD + ++++GY G + +AR +
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 226 MENPGLD--TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
M + +W +ISG ++ AI++ + M ++P+ VTL + + + +L
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 284 GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
G+ + +Y R ++ + + A+ID YAK G I A VF+ R++V WT II A
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLV 403
HG + AL ++ +M+ +G++P+ VT A+L+AC+H G VD ++FN+M SKYGI P +
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNI 387
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
E Y CM+ +L RAGKL EA + I MP + +A WG+LL ++V+ D+E G+ A L +
Sbjct: 388 EHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK 447
Query: 464 IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDV 523
+EP +SGNY+++ANLYS GRW+E+ +R M+ IGV K+ G S IE+ R+ FI+ D+
Sbjct: 448 LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDL 507
Query: 524 SNERSDEIYTYLE 536
++ + + I+ L+
Sbjct: 508 THPQVERIHEILQ 520
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 277/559 (49%), Gaps = 67/559 (11%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLY 121
G ++++ + + +V Y + + ARKVFD MPE+DT+ WN+MI GY + Y E +++
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI---------------- 165
++++ D T++ ++ A + ++L LGM++H ++G
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 166 ---------------EVDLPLCNAVIAMYAKCGSLDYARELFEEM-------SEKDDVSY 203
+ D+ NA+I Y G + + LF+E+ VS
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 204 ----GSIISGYMAYGFVVK-------------------------ARDVFRGMENPGLDTW 234
G ++ Y +G+ +K AR +F L +W
Sbjct: 329 VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
NA+ISG QN E AI L REMQ S PN VT+ + + L GK VH
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
++ +IYV+TA+I YAK G I AR++FD ++ V W +I+ Y HG AL +
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ +ML+SGI P VT VL AC+H+GLV E +IFN+M +YG +P V+ YACMV +L
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYII 474
RAG L A +FI M IEP + W LL ++ D + + LFE++P++ G +++
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVL 628
Query: 475 MANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTY 534
++N++S + +A+ VR+ ++ + K G + IE+ F + D S+ + EIY
Sbjct: 629 LSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEK 688
Query: 535 LEGLFCMMREEGYILQEEL 553
LE L MRE GY + EL
Sbjct: 689 LEKLEGKMREAGYQPETEL 707
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 277/515 (53%), Gaps = 11/515 (2%)
Query: 27 SPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL-ETDIFVENAL-VTCYCRCGEIG 84
S S S+L+ YK H ++ GL E + FV L + G++
Sbjct: 4 SSSSLVAKSILRHQCKSMSELYK----IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVD 59
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
A K + + WN +I G+S E+ +Y++ML G ++PD +T +M++
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG-LLPDHMTYPFLMKSS 118
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
+ + LG +H V +SG+E DL +CN +I MY AR+LF+EM K+ V++
Sbjct: 119 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 178
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL-K 263
SI+ Y G VV AR VF M + TW+++I G V+ + A+++ +M G K
Sbjct: 179 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 238
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
N VT+ S I ++ L GK VH Y + + + T++ID YAK G I A V
Sbjct: 239 ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 324 FDQA--RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
F +A + ++W AII A+HG +L L+ +M +S I PD++T +L AC+H G
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGAL 441
LV EAW F ++ + G +P E YACMV VLSRAG + +A FISEMPI+P+ GAL
Sbjct: 359 LVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGAL 417
Query: 442 LNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
LNG +G++E + L E++P + G Y+ +AN+Y+ ++ A +R+ ME+ GV
Sbjct: 418 LNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVK 477
Query: 502 KIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
KI G S +++ G FIA D ++ SD+IY L+
Sbjct: 478 KIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 271/496 (54%), Gaps = 9/496 (1%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
E C + + + N L+ + + +I AR+ FD M RD VSWN++I GY+Q G
Sbjct: 205 EEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSG 264
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+E ++L+ E S V D T +++ Q++ + E+ + E EV
Sbjct: 265 KIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN-EVSW--- 315
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
NA++A Y + ++ A+ELF+ M ++ ++ ++I+GY G + +A+++F M
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+W A+I+G Q+ A+ L +M+ G + N + +S + + L GK++H
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
++ Y+ +V A++ Y K G I A +F + + +V W +I Y+ HG +AL
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
+ M G++PD T+ AVL+AC+H+GLVD+ + F TM YG+ P + YACMV +
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
L RAG L +A + MP EP A WG LL + V+G+ E + A D +F +EPE+SG Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
++++NLY+ +GRW + ++R RM + GV K+ G SWIE+ + F D + DEI+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 533 TYLEGLFCMMREEGYI 548
+LE L M++ GY+
Sbjct: 676 AFLEELDLRMKKAGYV 691
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 168/390 (43%), Gaps = 66/390 (16%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
++DI N ++ Y R G A +VF MP +VS+N MI GY + G +E ++L+ E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M E DL N +I Y +
Sbjct: 121 M----------------------------------------PERDLVSWNVMIKGYVRNR 140
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+L ARELFE M E+D S+ +++SGY G V AR VF M +WNAL+S VQ
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD----Q 299
N+ E A L + + L L + K+ R+ +D +
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFV------------KKKKIVEARQFFDSMNVR 248
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ II YA+ G I ARQ+FD++ + + WTA+++ Y + A L+ +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+ ++V+ A+L ++ A ++F+ M + V + M+ ++ GK+
Sbjct: 309 ER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKI 359
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYG 449
SEA +MP +W A++ G S G
Sbjct: 360 SEAKNLFDKMPKRDPV-SWAAMIAGYSQSG 388
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS +G L LF G + + +S L A + K+ H +++
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD--VVALELGKQLHGRLVK 437
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G ET FV NAL+ YC+CG I A +F M +D VSWN+MI GYS+ GF E R
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMY 179
+ M G + PD T+V+V+ AC + + G + + + G+ + ++ +
Sbjct: 498 FESMKREG-LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 180 AKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYG 214
+ G L+ A L + M E D +G+++ +G
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 284/554 (51%), Gaps = 49/554 (8%)
Query: 7 FNGLYRHLL---DLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
F LYR F S+DA +S ++ + +K+ S + HC V++
Sbjct: 12 FRFLYRRRFLSQSSFVHSLDANVS----SLIAAVKSCVSIEL-----CRLLHCKVVKSVS 62
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC-KRLYM 122
F+ + LV CY R G A K+FD MPERD VSWNS+I GYS G+ +C + L
Sbjct: 63 YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSR 122
Query: 123 EMLSVGSVVPDGVTIVSVMQAC--GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
M+S P+ VT +S++ AC G SK+ G +HG V + G+ ++ + NA I Y
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEE--GRCIHGLVMKFGVLEEVKVVNAFINWYG 180
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
K G L + +LFE++S K+ VS WN +I
Sbjct: 181 KTGDLTSSCKLFEDLSIKNLVS-------------------------------WNTMIVI 209
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+QN E + + G +P+ T + + +R + +H + + N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ TA++D Y+KLG + + VF + S + WTA++ AYA HG A+ + M+
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
GI PD VT T +L AC+HSGLV+E F TM +Y I P ++ Y+CMV +L R+G L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
+A I EMP+EPS+ WGALL VY D + G A + LFE+EP NY++++N+YS
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
+G W++ASR+R M++ G+ + G S+IE ++ F+ D S+ S++I L+ +
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 509
Query: 541 MMREE-GYILQEEL 553
M+ E GY + E
Sbjct: 510 KMKSEMGYKSKTEF 523
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ + NGL L F S G PD T +VL+ + + + H ++
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLR--SCEDMGVVRLAQGIHGLIMF 263
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + + AL+ Y + G + + VF + D+++W +M+ Y+ GF + +
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQS 147
+ M+ G + PD VT ++ AC S
Sbjct: 324 FELMVHYG-ISPDHVTFTHLLNACSHS 349
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 287/599 (47%), Gaps = 82/599 (13%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
+ +G++PD T SVLKA + + HC L+ G D++V +L+ Y R
Sbjct: 145 LSSGLTPDYRTFPSVLKACRT-----VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVM 141
+G AR +FD MP RD SWN+MI GY Q G +E LS G D VT+VS++
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLL 254
Query: 142 QACGQSKDLVLGMEVHG-----------FVNESGIEV--------------------DLP 170
AC ++ D G+ +H FV+ I++ DL
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEK-------------------------------- 198
N++I Y A LF+EM
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 199 -------DDVSYGS-IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+D++ G+ ++ Y G V AR VF + N + +WN +ISG QN + A
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 251 IDLVREMQGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
I++ M+ G + N T S +P S LR G ++H ++ +++V T++ D
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y K G + A +F Q + V W +I + HG A+ L+ +MLD G++PD +T
Sbjct: 495 MYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
+L+AC+HSGLVDE F M + YGI P ++ Y CMV + RAG+L A KFI M
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEAS 489
++P A WGALL+ V+G+V+ GK A +HLFE+EPE G +++++N+Y+ AG+WE
Sbjct: 615 SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVD 674
Query: 490 RVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
+R G+ K G S +E+ ++ F + ++ +E+Y L L ++ GY+
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYV 733
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 210/495 (42%), Gaps = 101/495 (20%)
Query: 45 FSYYKPVKEAHCFVLRRGLET---DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSW 101
F Y ++ A C R + ++ + LV YC G + LAR FD + RD +W
Sbjct: 61 FRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 102 NSMIGGYSQCGFYEECKRLY-MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV 160
N MI GY + G E R + + MLS G + PD T SV++AC + ++ G ++H
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSG-LTPDYRTFPSVLKAC---RTVIDGNKIHCLA 176
Query: 161 NESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKAR 220
+ G D+ + ++I +Y++ ++ AR LF+EM +D S+ ++ISGY G +A
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 221 DVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
+ G+ R M ++VT+ S + +
Sbjct: 237 TLSNGL----------------------------RAM-------DSVTVVSLLSACTEAG 261
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
+ G +H+Y+I+ + ++V+ +ID YA+ G + ++VFD+ R L+ W +II
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTL------------------------------ 370
AY + A+ L+ +M S IQPD +TL
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 371 ------TAVLTACAHSGLVDEAWKIF-----------NTMHSKYGIQPLVEQYACMVGVL 413
AV+ A GLVD A +F NT+ S Y + M ++
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 414 SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYI 473
G++ AA + + + P+ GAL G ++G + D +F +
Sbjct: 442 EEEGEI--AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD-VFVVTS------- 491
Query: 474 IMANLYSCAGRWEEA 488
+A++Y GR E+A
Sbjct: 492 -LADMYGKCGRLEDA 505
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 175/391 (44%), Gaps = 64/391 (16%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ AY N + LF + I PD T+ S+ ++ + + F LR
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ--LGDIRACRSVQGFTLR 376
Query: 61 RG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+G DI + NA+V Y + G + AR VF+ +P D +SWN++I GY+Q GF E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+Y M G + + T VSV+ AC Q+ L GM++HG + ++G+ +D+ + ++ MY
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIIS--GYMAYGFVVKARDVFRGMENPGLDTWNAL 237
KCG L+ A LF ++ + V + ++I+ G+ +G
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG----------------------- 533
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
E A+ L +EM G+KP+ +T + + S+ + G+ C+
Sbjct: 534 ----------EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ--------WCF 575
Query: 298 D--QNIYVAT-------AIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAA 344
+ Q Y T ++D Y + G + A + +S SL IW A+++A
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI---KSMSLQPDASIWGALLSACRV 632
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
HG+ L + + ++P+ V +L+
Sbjct: 633 HGNVDLGKIASEHLFE--VEPEHVGYHVLLS 661
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
LF Y +NL+ K +HA + QN+ ++ +++ Y LG + AR FD ++R +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 335 WTAIITAYAAHGDASLALGLYAQ-MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM 393
W +I+ Y G++S + ++ ML SG+ PD T +VL AC V + KI + +
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI-HCL 175
Query: 394 HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
K+G V A ++ + SR + A EMP+ +W A+++G G+ +
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISGYCQSGNAK 233
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/615 (29%), Positives = 296/615 (48%), Gaps = 71/615 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ N + +L LF + G P+SFT + L +A + H V++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL--QVHTVVVK 222
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL+ I V N+L+ Y +CG + AR +FD + V+WNSMI GY+ G E +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M + V + SV++ C K+L ++H V + G D + A++ Y+
Sbjct: 283 FYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 181 KCGSL--------------------------------DYARELFEEMSEK----DDVSYG 204
KC ++ + A +LF EM K ++ +Y
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 205 SIISG-------------------------------YMAYGFVVKARDVFRGMENPGLDT 233
I++ Y+ G V +A VF G+++ +
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG-GKEVHAYA 292
W+A+++G Q E AI + E+ G+KPN T +S + + + + G GK+ H +A
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
I+ D ++ V++A++ YAK G I A +VF + R + LV W ++I+ YA HG A AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
++ +M ++ D VT V AC H+GLV+E K F+ M I P E +CMV +
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
SRAG+L +A K I MP + W +L V+ E G+ A + + ++PE S Y
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 701
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
++++N+Y+ +G W+E ++VRK M E V K G SWIE+ + +F+A D S+ D+IY
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 761
Query: 533 TYLEGLFCMMREEGY 547
LE L +++ GY
Sbjct: 762 MKLEDLSTRLKDLGY 776
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 221/462 (47%), Gaps = 59/462 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L +S +G + LF + G+ D +SVLK A+ + ++ HC ++
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG--RQLHCQCIK 121
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D+ V +LV Y + RKVFD M ER+ V+W ++I GY++ +E L
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+M M + G+ P+ T + + + G++VH V ++G++ +P+ N++I +Y
Sbjct: 182 FMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG++ AR LF++ K V++ S+ISGY A G ++A +F M
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR------------- 287
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR--CYD 298
++ VR + S AS I L + LR +++H ++ +D
Sbjct: 288 ----------LNYVRLSESS--------FASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARS-RSLVIWTAIITAYAAHGDASLALGLYAQ 357
QNI TA++ Y+K + A ++F + ++V WTA+I+ + + A+ L+++
Sbjct: 330 QNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 358 MLDSGIQPDQVTLTAVLTAC-------AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
M G++P++ T + +LTA H+ +V ++ +T+ + L++ Y
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT-----ALLDAYV--- 439
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
+ GK+ EAAK S + + AW A+L G + G+ E
Sbjct: 440 ----KLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 173/365 (47%), Gaps = 45/365 (12%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
A +FD P RD S+ S++ G+S+ G +E KRL++ + +G + D SV++
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCSIFSSVLKVSA 104
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
D + G ++H + G D+ + +++ Y K + R++F+EM E++ V++ +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+ISGY +N+ + + L MQ G +PN
Sbjct: 165 LISGY-------------------------------ARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
+ T A+ + + + G +VH ++ D+ I V+ ++I+ Y K G + AR +FD
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ +S+V W ++I+ YAA+G ALG++ M + ++ + + +V+ CA+ +
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL----K 309
Query: 386 AWKIFNTMHS---KYGIQPLVEQ---YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWG 439
+ +H KYG L +Q A MV S+ + +A + E+ + +W
Sbjct: 310 ELRFTEQLHCSVVKYGF--LFDQNIRTALMVA-YSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 440 ALLNG 444
A+++G
Sbjct: 367 AMISG 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 113/229 (49%), Gaps = 5/229 (2%)
Query: 227 ENPGLD--TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
++PG D ++ +L+ G ++ + A L + G++ + +S + + + +
Sbjct: 52 KSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF 111
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
G+++H I+ + ++ V T+++DTY K R+VFD+ + R++V WT +I+ YA
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
+ L L+ +M + G QP+ T A L A G+ ++ +T+ K G+ +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIP 230
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG-DVE 452
++ + + G + +A + ++ S W ++++G + G D+E
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLE 278
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 269/527 (51%), Gaps = 48/527 (9%)
Query: 5 YSFNGLYRHL----------LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA 54
YSFN + R L L L+ +G+ PD FT V IA +
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVF--IACAKLEEIGVGRSV 154
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H + + GLE D+ + ++L+ Y +CG++G ARK+FD + ERDTVSWNSMI GYS+ G+
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
++ L+ +M G PD T+VS++ AC DL G + I + L +
Sbjct: 215 KDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
+I+MY KCG LD AR +F +M +KD V+ W
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVA-------------------------------W 302
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
A+I+ QN A L EM+ +G+ P+A TL++ + L GK++ +A
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
NIYVAT ++D Y K G + A +VF+ ++ W A+ITAYA G A AL L
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ +M + P +T VL+AC H+GLV + + F+ M S +G+ P +E Y ++ +LS
Sbjct: 423 FDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEI-EPESSGNYI 473
RAG L EA +F+ P +P A+L DV + A L E+ E +++GNY+
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 474 IMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIA 520
I +N+ + W+E++++R M + GV K G SWIE+ G L+ F+A
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 35/392 (8%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC-GFYEECKRLYMEMLSVGS 129
N L+ G+ + +F E + S+N MI G + +E LY M G
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSG- 127
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
+ PD T V AC + +++ +G VH + + G+E D+ + +++I MYAKCG + YAR
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 190 ELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEG 249
+LF+E++E+D VS+ S+ISGY G+ A D+FR ME G +
Sbjct: 188 KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE----------------- 230
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
P+ TL S + S+ +LR G+ + AI + + ++ + +I
Sbjct: 231 --------------PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y K G + AR+VF+Q + V WTA+IT Y+ +G +S A L+ +M +G+ PD T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
L+ VL+AC G + E K T S+ +Q + +V + + G++ EA + M
Sbjct: 337 LSTVLSACGSVGAL-ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
P++ A W A++ + G + D +
Sbjct: 396 PVKNEA-TWNAMITAYAHQGHAKEALLLFDRM 426
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 5/279 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS G + +DLF + G PD T+ S+L A + + E +
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL T F+ + L++ Y +CG++ AR+VF+ M ++D V+W +MI YSQ G E +L
Sbjct: 264 IGLST--FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ EM G V PD T+ +V+ ACG L LG ++ +E ++ ++ + ++ MY
Sbjct: 322 FFEMEKTG-VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD-TWNALIS 239
KCG ++ A +FE M K++ ++ ++I+ Y G +A +F M P D T+ ++S
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLS 440
Query: 240 GMVQNNWFEGAIDLVREMQGS-GLKPNAVTLASTIPLFS 277
V EM GL P + I L S
Sbjct: 441 ACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS NG LF G+SPD+ T+++VL A S E H L
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL- 363
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
L+ +I+V LV Y +CG + A +VF+ MP ++ +WN+MI Y+ G +E L
Sbjct: 364 -SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMY 179
+ M SV P +T + V+ AC + + G H + G+ + +I +
Sbjct: 423 FDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLL 478
Query: 180 AKCGSLDYARELFEEMSEKDD 200
++ G LD A E E K D
Sbjct: 479 SRAGMLDEAWEFMERFPGKPD 499
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 290/546 (53%), Gaps = 37/546 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y NG+ L+LF + + PD T+TSV+ A + ++ H +V+
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA--CELLGDRRLGRDIHAYVIT 325
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G DI V N+L Y G A K+F M +D VSW +MI GY ++
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y M+ SV PD +T+ +V+ AC DL G+E+H ++ + + + N +I MY+
Sbjct: 386 Y-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC +D KA D+F + + +W ++I+G
Sbjct: 445 KCKCID-------------------------------KALDIFHNIPRKNVISWTSIIAG 473
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ NN A+ +R+M+ + L+PNA+TL + + + L GKE+HA+ +R +
Sbjct: 474 LRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
++ A++D Y + G ++ A F+ ++ + + W ++T Y+ G S+ + L+ +M+
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
S ++PD++T ++L C+ S +V + F+ M YG+ P ++ YAC+V +L RAG+L
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQ 650
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
EA KFI +MP+ P WGALLN ++ ++ G+ + H+FE++ +S G YI++ NLY+
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYA 710
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
G+W E ++VR+ M+E G+ G SW+E+ G++ AF++ D + ++ EI T LEG +
Sbjct: 711 DCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYE 770
Query: 541 MMREEG 546
M E G
Sbjct: 771 KMSEVG 776
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 221/512 (43%), Gaps = 82/512 (16%)
Query: 24 AGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
G+ PD +T VL+ P + K E H V+R G E DI V NAL+T Y +CG+
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGK---EVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ AR +FD MP RD +SWN+MI GY + G E L+ M + SV PD +T+ SV+
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVIS 305
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
AC D LG ++H +V +G VD+ +CN++ MY GS A +LF M KD VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL 262
+ ++ISGY Y F+ + AID R M +
Sbjct: 366 WTTMISGY-EYNFLP------------------------------DKAIDTYRMMDQDSV 394
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQ 322
KP+ +T+A+ + + +L G E+H AI+ + VA +I+ Y+K I A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 323 VFDQARSRSLVIWTAIITAYAAHGDASLAL------------------------------ 352
+F ++++ WT+II + AL
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 353 ----GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
++A +L +G+ D A+L G ++ AW FN+ V +
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKD------VTSWNI 568
Query: 409 MVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETG--KFACDHLFE 463
++ S G+ S + M + P + +LL G S V G F+ +
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYG 628
Query: 464 IEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
+ P +Y + +L AG +EA + ++M
Sbjct: 629 VTPNLK-HYACVVDLLGRAGELQEAHKFIQKM 659
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 182/378 (48%), Gaps = 41/378 (10%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
NA + + R G + A VF M ER+ SWN ++GGY++ G+++E LY ML VG V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD T V++ CG DL G EVH V G E+D+ + NA+I MY KCG + AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
LF+ M +D +S+ ++ISGY GM + GL+ + A
Sbjct: 253 LFDRMPRRDIISWNAMISGYFE-----------NGMCHEGLELFFA-------------- 287
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
M+G + P+ +TL S I + R G+++HAY I + +I V ++
Sbjct: 288 ------MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
Y G A ++F + + +V WT +I+ Y + A+ Y M ++PD++T+
Sbjct: 342 YLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC----MVGVLSRAGKLSEAAKFI 426
AVL+ACA G +D ++ K I+ + Y ++ + S+ + +A
Sbjct: 402 AAVLSACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 427 SEMPIEPSAKAWGALLNG 444
+P + +W +++ G
Sbjct: 457 HNIP-RKNVISWTSIIAG 473
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 5/209 (2%)
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
+ G+ N E A+ L+ MQ + + + + L + G +V++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
+ + A + + + G + A VF + R+L W ++ YA G A+ LY +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 358 ML-DSGIQPDQVTLTAVLTACAHSGLVDEAW-KIFNTMHSKYGIQPLVEQYACMVGVLSR 415
ML G++PD T VL C G+ D A K + +YG + ++ ++ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 416 AGKLSEAAKFISEMPIEPSAKAWGALLNG 444
G + A MP +W A+++G
Sbjct: 244 CGDVKSARLLFDRMP-RRDIISWNAMISG 271
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 261/496 (52%), Gaps = 40/496 (8%)
Query: 18 FASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCY 77
+ + V G SPD FT V KA FS + K+ H V + G DI+V+N+LV Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGK--FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFY 151
Query: 78 CRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
CGE A KVF MP RD VSW +I G+++ G Y+E + +M V P+ T
Sbjct: 152 GVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATY 207
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
V V+ + G+ L LG +HG + + + L NA+I MY KC L A +F E+ +
Sbjct: 208 VCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK 267
Query: 198 KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM 257
KD VS WN++ISG+V + AIDL M
Sbjct: 268 KDKVS-------------------------------WNSMISGLVHCERSKEAIDLFSLM 296
Query: 258 Q-GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
Q SG+KP+ L S + + + G+ VH Y + + ++ TAI+D YAK G+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGY 356
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
I A ++F+ RS+++ W A++ A HG +L + +M+ G +P+ VT A L A
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 377 CAHSGLVDEAWKIFNTMHSK-YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
C H+GLVDE + F+ M S+ Y + P +E Y CM+ +L RAG L EA + + MP++P
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Query: 436 KAWGALLNGASVYGDV-ETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKR 494
+ GA+L+ G + E K D +IE E SG Y++++N+++ RW++ +R+R+
Sbjct: 477 RICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRL 536
Query: 495 MEEIGVHKIRGSSWIE 510
M+ G+ K+ GSS+IE
Sbjct: 537 MKVKGISKVPGSSYIE 552
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 162/392 (41%), Gaps = 76/392 (19%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ ++ GLY+ LD F S +D + P+ T VL ++S K H +L+
Sbjct: 178 IITGFTRTGLYKEALDTF-SKMD--VEPNLATYVCVL--VSSGRVGCLSLGKGIHGLILK 232
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
R + NAL+ Y +C ++ A +VF + ++D VSWNSMI G C +E L
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDL 292
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M + + PDG + SV+ AC + G VH ++ +GI+ D + A++ MYA
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG ++ A E+F +++++VF TWNAL+ G
Sbjct: 353 KCGYIETALEIFNG----------------------IRSKNVF---------TWNALLGG 381
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ + ++ EM G KPN VT
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTF------------------------------- 410
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
A ++ G + R+ F + +SR ++ + Y D GL + L+
Sbjct: 411 ----LAALNACCHTGLVDEGRRYFHKMKSREYNLFPK-LEHYGCMIDLLCRAGLLDEALE 465
Query: 361 ----SGIQPDQVTLTAVLTACAHSGLVDEAWK 388
++PD A+L+AC + G + E K
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTLMELPK 497
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 142/337 (42%), Gaps = 32/337 (9%)
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN 228
LP + ++ + ++C SL +++ ++ +D + II+ + F+ K+ D F +
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVT--FLGKSAD-FASYSS 59
Query: 229 PGLDTWNALISGMVQNNWFEG---------AIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
L + +++S N I + +G P+ T F
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 280 SNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAII 339
S +R GK++H + + +IYV +++ Y G A +VF + R +V WT II
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGI 399
T + G AL +++M ++P+ T VL + G + I + + +
Sbjct: 180 TGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACD 459
L E ++ + + +LS+A + E+ + +W ++++G E K A D
Sbjct: 237 ISL-ETGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISGLV---HCERSKEAID 291
Query: 460 HLFEIEPESSG----NYIIMANLYSCA-------GRW 485
LF + SSG +I+ + L +CA GRW
Sbjct: 292 -LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRW 327
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 276/539 (51%), Gaps = 36/539 (6%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
LF G D FT++ ++ A +K+ HCF + G ++ V NA VT
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDR----VDLIKQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 77 YCRCGEIGLARKVFDGMPE-RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGV 135
Y + G + A VF GM E RD VSWNSMI Y Q + LY EM+ G + D
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI-DMF 241
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM 195
T+ SV+ A L+ G + HG + ++G + + + +I Y+KCG D +
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD----- 296
Query: 196 SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF-EGAIDLV 254
SEK VF+ + +P L WN +ISG N E A+
Sbjct: 297 SEK-----------------------VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN-IYVATAIIDTYAK 313
R+MQ G +P+ + S S+ K++H AI+ N I V A+I Y K
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYK 393
Query: 314 LGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G + AR VFD+ + V + +I YA HG + AL LY +MLDSGI P+++T AV
Sbjct: 394 SGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEP 433
L+ACAH G VDE + FNTM + I+P E Y+CM+ +L RAGKL EA +FI MP +P
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKP 513
Query: 434 SAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRK 493
+ AW ALL + ++ + A + L ++P ++ Y+++AN+Y+ A +WEE + VRK
Sbjct: 514 GSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRK 573
Query: 494 RMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEE 552
M + K G SWIE+ + F+A+D S+ E+ YLE + M++ GY++ ++
Sbjct: 574 SMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKK 632
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 215/512 (41%), Gaps = 108/512 (21%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGE----------------------------- 82
K H ++ + + ++ N V Y +CG
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 83 --IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
I +AR++FD +P+ DTVS+N++I GY+ L+ M +G V DG T+ +
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV-DGFTLSGL 146
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE-KD 199
+ AC DL+ ++H F G + + NA + Y+K G L A +F M E +D
Sbjct: 147 IAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
+VS WN++I Q+ A+ L +EM
Sbjct: 205 EVS-------------------------------WNSMIVAYGQHKEGAKALALYKEMIF 233
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
G K + TLAS + + +L GG++ H I+ + QN +V + +ID Y+K G G
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 320 ---ARQVFDQARSRSLVIWTAIITAYAAHGDAS-LALGLYAQMLDSGIQPDQVTLTAVLT 375
+ +VF + S LV+W +I+ Y+ + + S A+ + QM G +PD + V +
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 376 ACA---------------------------HSGLVDEAWKIFNTMHSKYGIQPLVE---- 404
AC+ ++ L+ +K N +++ + E
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 405 QYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+ CM+ ++ G +EA M I P+ + A+L+ + G V+ G+ + +
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 462 ---FEIEPESSGNYIIMANLYSCAGRWEEASR 490
F+IEPE+ +Y M +L AG+ EEA R
Sbjct: 474 KETFKIEPEAE-HYSCMIDLLGRAGKLEEAER 504
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
+DL G +H +S + L N + +Y+KCG L YAR F E + SY I+
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
Y + AR +F + P ++N LISG A+ L + M+ G + +
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF--- 324
TL+ I +L K++H +++ +D V A + Y+K G + A VF
Sbjct: 142 TLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
D+ R V W ++I AY H + + AL LY +M+ G + D TL +VL A
Sbjct: 200 DELRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 157/359 (43%), Gaps = 43/359 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++AY + L L+ + G D FT+ SVL A+ S + ++ H +++
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT--SLDHLIGGRQFHGKLIK 268
Query: 61 RGLETDIFVENALVTCYCRCGEI-GL--ARKVFDGMPERDTVSWNSMIGGYSQC-GFYEE 116
G + V + L+ Y +CG G+ + KVF + D V WN+MI GYS EE
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD-LPLCNAV 175
+ + +M +G PD + V V AC ++HG +S I + + + NA+
Sbjct: 329 AVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 176 IAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWN 235
I++Y K G+L AR +F+ M E + VS+ +I GY +G G E
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG---------HGTE-------- 430
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
A+ L + M SG+ PN +T + + ++ + G+E + ++
Sbjct: 431 --------------ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNTMKE 475
Query: 296 CY--DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIWTAIITAYAAHGDASLA 351
+ + + +ID + G + A + D + V W A++ A H + +LA
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 296/549 (53%), Gaps = 35/549 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ ++ +G L L S + +G S + T TS L A +P F ++ + H V+
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF--FEKGRILHGLVVV 373
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL + + NALV+ Y + GE+ +R+V MP RD V+WN++IGGY++ ++
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLV-LGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ M V V + +T+VSV+ AC DL+ G +H ++ +G E D + N++I MY
Sbjct: 434 FQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 492
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
AKCG L ++D+F G++N + TWNA+++
Sbjct: 493 AKCGDLS-------------------------------SSQDLFNGLDNRNIITWNAMLA 521
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
+ E + LV +M+ G+ + + + + + + L G+++H A++ ++
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ ++ A D Y+K G I ++ + +RSL W +I+A HG + +ML
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+ GI+P VT ++LTAC+H GLVD+ ++ + +G++P +E C++ +L R+G+L
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+EA FIS+MP++P+ W +LL ++G+++ G+ A ++L ++EPE Y++ +N++
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 761
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ GRWE+ VRK+M + K + SW+++ ++ +F D ++ ++ EIY LE +
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 821
Query: 540 CMMREEGYI 548
+++E GY+
Sbjct: 822 KLIKESGYV 830
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 230/472 (48%), Gaps = 37/472 (7%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
GLY ++ F D GI P SF + S++ A S S ++ + H FV + GL +D++
Sbjct: 20 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR-SGSMFREGVQVHGFVAKSGLLSDVY 78
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
V A++ Y G + +RKVF+ MP+R+ VSW S++ GYS G EE +Y M G
Sbjct: 79 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG 138
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V + ++ V+ +CG KD LG ++ G V +SG+E L + N++I+M G++DYA
Sbjct: 139 -VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 197
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
+F++MSE+D +S+ SI + Y G + ++ +F
Sbjct: 198 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF------------------------- 232
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
L+R + N+ T+++ + + + + + G+ +H ++ +D + V ++
Sbjct: 233 ---SLMRRFHD---EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 286
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
YA G A VF Q ++ L+ W +++ ++ G + ALGL M+ SG + V
Sbjct: 287 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 346
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
T T+ L AC ++ +I + + G+ +V + + G++SE+ + + +
Sbjct: 347 TFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
MP AW AL+ G + D + A +E SS NYI + ++ S
Sbjct: 406 MP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSS-NYITVVSVLS 454
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 229/529 (43%), Gaps = 72/529 (13%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
AY+ NG +F+ +S TV+++L + + K + H V++ G
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH--VDHQKWGRGIHGLVVKMGF 275
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
++ + V N L+ Y G A VF MP +D +SWNS++ + G + L
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M+S G V + VT S + AC G +HG V SG+ + + NA+++MY K G
Sbjct: 336 MISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+ +R + +M +D V+ WNALI G +
Sbjct: 395 EMSESRRVLLQMPRRDVVA-------------------------------WNALIGGYAE 423
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN-LRGGKEVHAYAIRRCYDQNIY 302
+ + A+ + M+ G+ N +T+ S + + L GK +HAY + ++ + +
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
V ++I YAK G + ++ +F+ +R+++ W A++ A A HG L L ++M G
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWK---------------IFNT---MHSKYG------ 398
+ DQ + + L+A A +++E + IFN M+SK G
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603
Query: 399 --IQPLVEQ----YACMVGVLSRAGKLSEA-AKF--ISEMPIEPSAKAWGALLNGASVYG 449
+ P V + + ++ L R G E A F + EM I+P + +LL S G
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Query: 450 DVETGKFACDHL---FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
V+ G D + F +EP + I + +L +GR EA +M
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIE-HCICVIDLLGRSGRLAEAETFISKM 711
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 57/362 (15%)
Query: 93 MPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVL 152
MP R+ VSWN+M+ G + G Y E + +M +G + P I S++ ACG+S +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFR 59
Query: 153 -GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
G++VHGFV +SG+ D+ + A++ +Y
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYG------------------------------- 88
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
YG V +R VF M + + +W +L+ G E ID+ + M+G G+ N +++
Sbjct: 89 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
I + G+++ ++ + + V ++I +G + A +FDQ R
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
+ W +I AYA +G + +++ M + + T++ +L+ H VD
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VD------- 258
Query: 392 TMHSKY--GIQPLV-----EQYACMVGVLSR----AGKLSEAAKFISEMPIEPSAKAWGA 440
H K+ GI LV + C+ L R AG+ EA +MP + +W +
Sbjct: 259 --HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNS 315
Query: 441 LL 442
L+
Sbjct: 316 LM 317
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 296/549 (53%), Gaps = 35/549 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ ++ +G L L S + +G S + T TS L A +P F ++ + H V+
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF--FEKGRILHGLVVV 390
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL + + NALV+ Y + GE+ +R+V MP RD V+WN++IGGY++ ++
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLV-LGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ M V V + +T+VSV+ AC DL+ G +H ++ +G E D + N++I MY
Sbjct: 451 FQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
AKCG L ++D+F G++N + TWNA+++
Sbjct: 510 AKCGDLS-------------------------------SSQDLFNGLDNRNIITWNAMLA 538
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
+ E + LV +M+ G+ + + + + + + L G+++H A++ ++
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ ++ A D Y+K G I ++ + +RSL W +I+A HG + +ML
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+ GI+P VT ++LTAC+H GLVD+ ++ + +G++P +E C++ +L R+G+L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+EA FIS+MP++P+ W +LL ++G+++ G+ A ++L ++EPE Y++ +N++
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 778
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ GRWE+ VRK+M + K + SW+++ ++ +F D ++ ++ EIY LE +
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 838
Query: 540 CMMREEGYI 548
+++E GY+
Sbjct: 839 KLIKESGYV 847
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 230/472 (48%), Gaps = 37/472 (7%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
GLY ++ F D GI P SF + S++ A S S ++ + H FV + GL +D++
Sbjct: 37 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR-SGSMFREGVQVHGFVAKSGLLSDVY 95
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
V A++ Y G + +RKVF+ MP+R+ VSW S++ GYS G EE +Y M G
Sbjct: 96 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG 155
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V + ++ V+ +CG KD LG ++ G V +SG+E L + N++I+M G++DYA
Sbjct: 156 -VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
+F++MSE+D +S+ SI + Y G + ++ +F
Sbjct: 215 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF------------------------- 249
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
L+R + N+ T+++ + + + + + G+ +H ++ +D + V ++
Sbjct: 250 ---SLMRRFHD---EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
YA G A VF Q ++ L+ W +++ ++ G + ALGL M+ SG + V
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
T T+ L AC ++ +I + + G+ +V + + G++SE+ + + +
Sbjct: 364 TFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
MP AW AL+ G + D + A +E SS NYI + ++ S
Sbjct: 423 MP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSS-NYITVVSVLS 471
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 230/529 (43%), Gaps = 72/529 (13%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
AY+ NG +F+ +S TV+++L + + K + H V++ G
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH--VDHQKWGRGIHGLVVKMGF 292
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
++ + V N L+ Y G A VF MP +D +SWNS++ + G + L
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M+S G V + VT S + AC G +HG V SG+ + + NA+++MY K G
Sbjct: 353 MISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+ +R + +M +D V+ WNALI G +
Sbjct: 412 EMSESRRVLLQMPRRDVVA-------------------------------WNALIGGYAE 440
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN-LRGGKEVHAYAIRRCYDQNIY 302
+ + A+ + M+ G+ N +T+ S + + L GK +HAY + ++ + +
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
V ++I YAK G + ++ +F+ +R+++ W A++ A A HG L L ++M G
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWK---------------IFNT---MHSKYG------ 398
+ DQ + + L+A A +++E + IFN M+SK G
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620
Query: 399 --IQPLVEQ----YACMVGVLSRAGKLSEA-AKF--ISEMPIEPSAKAWGALLNGASVYG 449
+ P V + + ++ L R G E A F + EM I+P + +LL S G
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680
Query: 450 DVETGKFACDHL---FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
V+ G D + F +EP + + I + +L +GR EA +M
Sbjct: 681 LVDKGLAYYDMIARDFGLEP-AIEHCICVIDLLGRSGRLAEAETFISKM 728
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 57/378 (15%)
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y + G + AR +FD MP R+ VSWN+M+ G + G Y E + +M +G + P
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFV 60
Query: 137 IVSVMQACGQSKDLVL-GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM 195
I S++ ACG+S + G++VHGFV +SG+ D+ + A++ +Y
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG--------------- 105
Query: 196 SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVR 255
YG V +R VF M + + +W +L+ G E ID+ +
Sbjct: 106 ----------------VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 149
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
M+G G+ N +++ I + G+++ ++ + + V ++I +G
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
+ A +FDQ R + W +I AYA +G + +++ M + + T++ +L+
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 376 ACAHSGLVDEAWKIFNTMHSKY--GIQPLV-----EQYACMVGVLSR----AGKLSEAAK 424
H VD H K+ GI LV + C+ L R AG+ EA
Sbjct: 270 VLGH---VD---------HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 425 FISEMPIEPSAKAWGALL 442
+MP + +W +L+
Sbjct: 318 VFKQMPTK-DLISWNSLM 334
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MY K G + AR LF+ M +++VS+ +++SG + G ++ + FR M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM----------- 49
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL-RGGKEVHAYAIRRC 296
DL G+KP++ +AS + ++ R G +VH + +
Sbjct: 50 -------------CDL-------GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSG 89
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
++YV+TAI+ Y G + +R+VF++ R++V WT+++ Y+ G+ + +Y
Sbjct: 90 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 149
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAW--KIFNTMHSKYGIQPLVEQYACMVGVLS 414
M G+ ++ +++ V+++C L DE+ +I + K G++ + ++ +L
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQV-VKSGLESKLAVENSLISMLG 206
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
G + + A +I + E +W ++ + G +E
Sbjct: 207 SMGNV-DYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 266/522 (50%), Gaps = 44/522 (8%)
Query: 27 SPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLA 86
+PD+FT T++ K+ S S Y+ + + H + R G D++V +V Y + G++G A
Sbjct: 75 APDNFTFTTLTKS-CSLSMCVYQGL-QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
R FD MP R VSW ++I GY +CG + +L+ +M V VV
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV--------------- 177
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
+ NA++ + K G + AR LF+EM+ K +++ ++
Sbjct: 178 ------------------------IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTM 213
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS-GLKPN 265
I GY + AR +F M L +WN +I G QN + I L +EMQ + L P+
Sbjct: 214 IHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD 273
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
VT+ S +P S L G+ H + R+ D+ + V TAI+D Y+K G I A+++FD
Sbjct: 274 DVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ + + W A+I YA +G+A AL L+ M+ +PD++T+ AV+TAC H GLV+E
Sbjct: 334 EMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEE 392
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
K F+ M + G+ +E Y CMV +L RAG L EA I+ MP EP+ + L+
Sbjct: 393 GRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSAC 451
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
Y D+E + E+EP++ GNY+++ NLY+ RW++ V+ M + K G
Sbjct: 452 GQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVG 511
Query: 506 SSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
S IE++ + FI+ D ++ I+ L L M EE Y
Sbjct: 512 CSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 24 AGISPDSFTVTSVLKAIASP---SFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRC 80
+ PD T+ SVL AI+ S + HCFV R+ L+ + V A++ Y +C
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEW-----CHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 81 GEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
GEI A+++FD MPE+ SWN+MI GY+ G L++ M+ PD +T+++V
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK--PDEITMLAV 380
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS-EKD 199
+ AC + G + + E G+ + ++ + + GSL A +L M E +
Sbjct: 381 ITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPN 440
Query: 200 DVSYGSIISGYMAYGFVVKARDVFR 224
+ S +S Y + +A + +
Sbjct: 441 GIILSSFLSACGQYKDIERAERILK 465
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 284/540 (52%), Gaps = 57/540 (10%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
+ +I N LV+ Y + GEI ARKVFD MPER+ VSW +++ GY G + + L+ +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 124 MLSVGSVVPDGVTIVSVMQ------ACG------QSKDLVLGMEVHGFVNESGI------ 165
M V V ++ +Q AC ++ +HG E +
Sbjct: 136 MPEKNKV-SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 166 -----EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKAR 220
E + ++ Y + +D AR++F+ M EK +VS+ S++ GY+ G + A
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 221 DVFRGMENPGLDTWNALISGMVQN------------------------------NWFE-G 249
++F M + NA+ISG+ Q N FE
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
A+DL MQ G++P TL S + + + ++L GK+VHA +R +D ++YVA+ ++
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQV 368
Y K G + ++ +FD+ S+ +++W +II+ YA+HG AL ++ +M SG +P++V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
T A L+AC+++G+V+E KI+ +M S +G++P+ YACMV +L RAG+ +EA + I
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
M +EP A WG+LL + ++ +F L EIEPE+SG YI+++N+Y+ GRW +
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDV-SNERSDEIYTYLEGLFCMMREEGY 547
+ +RK M+ V K G SW E+ ++ AF + S+ + I L+ L ++RE GY
Sbjct: 555 AELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 206/495 (41%), Gaps = 74/495 (14%)
Query: 57 FVLRRGLETDIF--VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
+LRR T I N +T R G+I ARK+FD + SWNSM+ GY
Sbjct: 5 ILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP 64
Query: 115 EECKRLYMEMLSVGSVVPDGVT-----------IVSVMQACGQSKDLVLGMEVHGFVNES 163
+ ++L+ EM + +G+ V + + V G+V+
Sbjct: 65 RDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG 124
Query: 164 GIEV------DLPLCNAV-----IAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMA 212
++V +P N V + + + G +D A +L+E + +KD+++ S+I G
Sbjct: 125 KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 213 YGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
G V +AR++F M + TW +++G QNN + A + M P ++ T
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEVSWT 238
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
L Y N R + + + + A+I + G I AR+VFD + R+
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPV--KPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 333 VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA-----------HSG 381
W +I + +G AL L+ M G++P TL ++L+ CA H+
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 382 LVDEAW-------KIFNTMHSKYGIQPLVEQ--------------YACMVGVLSRAGKLS 420
LV + + TM+ K G LV+ + ++ + G
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCG--ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 421 EAAKFISEMPI----EPSAKAWGALLNGASVYGDVETGKF---ACDHLFEIEPESSGNYI 473
EA K EMP+ +P+ + A L+ S G VE G + + +F ++P + +Y
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP-ITAHYA 473
Query: 474 IMANLYSCAGRWEEA 488
M ++ AGR+ EA
Sbjct: 474 CMVDMLGRAGRFNEA 488
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 4/205 (1%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
+ NG LDLF G+ P T+ S+L AS + ++ K+ H ++R +
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG--KQVHAQLVRCQFD 363
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
D++V + L+T Y +CGE+ ++ +FD P +D + WNS+I GY+ G EE +++ EM
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCG 183
GS P+ VT V+ + AC + + G++++ + G++ ++ M + G
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 184 SLDYARELFEEMS-EKDDVSYGSII 207
+ A E+ + M+ E D +GS++
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLL 508
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 248/470 (52%), Gaps = 41/470 (8%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E D F N +++CY R A+ FD MP +D SWN+MI GY++ G E+ + L+
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M+ V NA+I+ Y +CG
Sbjct: 181 MMEKNEVS----------------------------------------WNAMISGYIECG 200
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME-NPGLDTWNALISGMV 242
L+ A F+ + V++ ++I+GYM V A +F+ M N L TWNA+ISG V
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+N+ E + L R M G++PN+ L+S + S S L+ G+++H + ++
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
T++I Y K G + A ++F+ + + +V W A+I+ YA HG+A AL L+ +M+D+
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNK 380
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
I+PD +T AVL AC H+GLV+ F +M Y ++P + Y CMV +L RAGKL EA
Sbjct: 381 IRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
K I MP P A +G LL V+ +VE +FA + L ++ +++ Y+ +AN+Y+
Sbjct: 441 LKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASK 500
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
RWE+ +RVRKRM+E V K+ G SWIE+ ++ F + D + D I+
Sbjct: 501 NRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y N L LF + ++ GI P+S ++S L + S + ++ H V +
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL--LGCSELSALQLGRQIHQIVSK 312
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
L D+ +L++ YC+CGE+G A K+F+ M ++D V+WN+MI GY+Q G ++ L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMY 179
+ EM+ + PD +T V+V+ AC + + +GM V + +E ++ +
Sbjct: 373 FREMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 180 AKCGSLDYARELFEEM 195
+ G L+ A +L M
Sbjct: 432 GRAGKLEEALKLIRSM 447
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 275/539 (51%), Gaps = 43/539 (7%)
Query: 14 LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
+ +LF + G D + T+VL ++A+ Y ++ HC ++ GL + + NAL
Sbjct: 206 VFNLFLREKEEGSDSD-YVFTAVLSSLAATI--YVGLGRQIHCITIKNGLLGFVALSNAL 262
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
VT Y +C + A K+FD +R++++W++M+ GYSQ G E +L+ M S G + P
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPS 321
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
TIV V+ AC L G ++H F+ + G E L A++ MYAK G L AR+ F+
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
+ E+D + W +LISG VQN+ E A+ L
Sbjct: 382 CLQERD-------------------------------VALWTSLISGYVQNSDNEEALIL 410
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK 313
R M+ +G+ PN T+AS + S + L GK+VH + I+ + + + +A+ Y+K
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 314 LGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G + VF + ++ +V W A+I+ + +G AL L+ +ML G++PD VT +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEP 433
++AC+H G V+ W FN M + G+ P V+ YACMV +LSRAG+L EA +FI I+
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDH 590
Query: 434 SAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRK 493
W LL+ +G E G +A + L + S Y+ ++ +Y+ GR + RV K
Sbjct: 591 GLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Query: 494 RMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCM----MREEGYI 548
M GV K G SWIE+ + F+ D + +E + L C+ M EEG++
Sbjct: 651 HMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET----KDLVCLVSRQMIEEGFV 705
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 250/528 (47%), Gaps = 74/528 (14%)
Query: 1 MLIAYSFNGLYRH---LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF 57
++ YS NG ++ LF I P+++T+ + KA +S S ++AH
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG--RQAHAL 143
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
V++ DI+V+ +LV YC+ G + KVF MPER+T +W++M+ GY+ G EE
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 118 KRLYMEMLSVGSVVPDG-VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
+++ L D +V+ + + + LG ++H ++G+ + L NA++
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALV 263
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
MY+KC SL+ A ++F+ +++ +++ ++++GY
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY-------------------------- 297
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
QN A+ L M +G+KP+ T+ + S L GK++H++ ++
Sbjct: 298 -----SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
++++++ TA++D YAK G + AR+ FD + R + +WT++I+ Y + D AL LY
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 357 QMLDSGIQPDQVTLTAVLTACA-----------HSGLVDEAWKI-------FNTMHSKYG 398
+M +GI P+ T+ +VL AC+ H + + + +TM+SK G
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 472
Query: 399 I------------QPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLN 443
V + M+ LS G+ EA + EM +EP + +++
Sbjct: 473 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 444 GASVYGDVETGKFACDHLFE---IEPESSGNYIIMANLYSCAGRWEEA 488
S G VE G F + + + ++P+ +Y M +L S AG+ +EA
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVD-HYACMVDLLSRAGQLKEA 579
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 191/396 (48%), Gaps = 35/396 (8%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
+ H ++R G T I N LV Y +CG++ A +F+ + +D VSWNS+I GYSQ
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 112 GFYEE---CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
G +L+ EM ++P+ T+ + +A + +G + H V + D
Sbjct: 94 GGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN 228
+ + +++ MY K G ++ ++F M E++ ++ +++SGY G V +A VF
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF----- 207
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
N F L + +GS + S++ Y G+++
Sbjct: 208 ----------------NLF-----LREKEEGSDSDYVFTAVLSSLAATIYVGL---GRQI 243
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H I+ + ++ A++ Y+K ++ A ++FD + R+ + W+A++T Y+ +G++
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A+ L+++M +GI+P + T+ VL AC+ ++E K ++ K G + +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTA 362
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+V + ++AG L++A K + E W +L++G
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 140/322 (43%), Gaps = 34/322 (10%)
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P T++ + Q ++LV G VHG + +G + N ++ YAKCG L A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F + KD VS+ S+I+GY G + + V +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ--------------------------- 104
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
L REM+ + PNA TLA S + G++ HA ++ +IYV T+++ Y
Sbjct: 105 -LFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY 163
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML---DSGIQPDQV 368
K G + +VF R+ W+ +++ YA G A+ ++ L + G D V
Sbjct: 164 CKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV 223
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
TAVL++ A + V +I + + K G+ V +V + S+ L+EA K
Sbjct: 224 -FTAVLSSLAATIYVGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 429 MPIEPSAKAWGALLNGASVYGD 450
+ ++ W A++ G S G+
Sbjct: 282 SG-DRNSITWSAMVTGYSQNGE 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
L P+ TL + S NL G+ VH IR I A +++ YAK G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDAS---LALGLYAQMLDSGIQPDQVTLTAVLTA-- 376
+F+ + +V W ++IT Y+ +G S + L+ +M I P+ TL + A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
S V S +G + +VG+ +AG + + K + MP E +
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGD---IYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 437 AWGALLNGASVYGDVETG-KFACDHLFEIEPESSGNYIIMANLYSCA 482
W +++G + G VE K L E E S +Y+ A L S A
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 278/492 (56%), Gaps = 11/492 (2%)
Query: 24 AGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEI 83
+ +SP + ++ + I SP+ K K+ H +++ G + D+ + L+ + +CG +
Sbjct: 29 SSLSPAKYIAGALQEHINSPA---PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCL 85
Query: 84 GLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
AR+VFD +P+ ++N MI GY + G +E L ++ +S DG T+ V++A
Sbjct: 86 SYARQVFDELPKPTLSAYNYMISGYLKHGLVKEL-LLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 144 CG-QSKDLVLGME----VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK 198
+ ++L VH + + +E+D L A++ Y K G L+ AR +FE M ++
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN-NWFEGAIDLVREM 257
+ V S+ISGYM GFV A ++F + + +NA++ G ++ + ++D+ M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 258 QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI 317
Q +G PN T AS I S ++ G++VHA ++ +I + ++++D YAK G I
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
+ AR+VFDQ + +++ WT++I Y +G+ AL L+ +M + I+P+ VT L+AC
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
+HSGLVD+ ++IF +M Y ++P +E YAC+V ++ RAG L++A +F MP P +
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI 444
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPES-SGNYIIMANLYSCAGRWEEASRVRKRME 496
W ALL+ +++G+VE A LF++ + G Y+ ++N+Y+ +W+ S++R+ M+
Sbjct: 445 WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMK 504
Query: 497 EIGVHKIRGSSW 508
+ K G SW
Sbjct: 505 RRRISKTIGRSW 516
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 168/392 (42%), Gaps = 77/392 (19%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKP---VKEAHCF 57
M+ Y +GL + LL L +G D +T++ VLKA S + P + H
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
+++ +E D + ALV Y + G++ AR VF+ M + + V SMI GY GF E+
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 118 KR--------------------------------LYMEMLSVGSVVPDGVTIVSVMQACG 145
+ +Y+ M G P+ T SV+ AC
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG-FHPNISTFASVIGACS 284
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+G +VH + +SG+ + + ++++ MYAKCG ++ AR +F++M EK+ S+ S
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+I GY G NP E A++L M+ ++PN
Sbjct: 345 MIDGYGKNG-------------NP------------------EEALELFTRMKEFRIEPN 373
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA--TAIIDTYAKLGFIHGARQV 323
VT + S+ + G E+ +++R Y + I+D + G ++ A
Sbjct: 374 YVTFLGALSACSHSGLVDKGYEIFE-SMQRDYSMKPKMEHYACIVDLMGRAGDLNKA--- 429
Query: 324 FDQARSRSLV----IWTAIITAYAAHGDASLA 351
F+ AR+ IW A++++ HG+ LA
Sbjct: 430 FEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 279/555 (50%), Gaps = 39/555 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCFVL 59
ML + +G LF I+PDS TV ++ I S SF + EA H +
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL---IQSASFEKSLKLLEAMHAVGI 180
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP--ERDTVSWNSMIGGYSQCGFYEEC 117
R G++ + V N ++ Y +CG++ A+ VF+ + +R VSWNSM YS G +
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
LY ML PD T +++ +C + L G +H G + D+ N I+
Sbjct: 241 FGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MY+K AR LF+ M+ + VS W +
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVS-------------------------------WTVM 328
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA-IRRC 296
ISG + + A+ L M SG KP+ VTL S I F +L GK + A A I C
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
N+ + A+ID Y+K G IH AR +FD +++V WT +I YA +G AL L++
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRA 416
+M+D +P+ +T AVL ACAHSG +++ W+ F+ M Y I P ++ Y+CMV +L R
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMA 476
GKL EA + I M +P A WGALLN ++ +V+ + A + LF +EP+ + Y+ MA
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 477 NLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
N+Y+ AG W+ +R+R M++ + K G S I+++G+ +F + + ++ IY L
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Query: 537 GLFCMMREEGYILQE 551
GL +++ + ++
Sbjct: 629 GLSLFAKDKHVLYKD 643
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 200/438 (45%), Gaps = 39/438 (8%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L LF G P++FT V KA A + + H +++ +D+FV A V
Sbjct: 37 LLLFREMKRGGFEPNNFTFPFVAKACAR--LADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
+ +C + A KVF+ MPERD +WN+M+ G+ Q G ++ L+ EM + + PD
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM-RLNEITPDS 153
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
VT+++++Q+ K L L +H G++V + + N I+ Y KCG LD A+ +FE
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 195 MSEKDD--VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
+ D VS+ S+ Y +G +A D F L M++ +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFG---EAFDAF------------GLYCLMLREEF------ 252
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
KP+ T + L G+ +H++AI DQ+I I Y+
Sbjct: 253 ----------KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
K AR +FD SR+ V WT +I+ YA GD AL L+ M+ SG +PD VTL +
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQ-PLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
+++ C G + E K + YG + V ++ + S+ G + EA P
Sbjct: 363 LISGCGKFGSL-ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP- 420
Query: 432 EPSAKAWGALLNGASVYG 449
E + W ++ G ++ G
Sbjct: 421 EKTVVTWTTMIAGYALNG 438
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 36/335 (10%)
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
L+ EM G P+ T V +AC + D+ VH + +S D+ + A + M+
Sbjct: 39 LFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF 97
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KC S+DYA ++FE M E+D ++ +++SG+ G KA +F
Sbjct: 98 VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLF---------------- 141
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
REM+ + + P++VT+ + I S+ +L+ + +HA IR D
Sbjct: 142 ---------------REMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQAR--SRSLVIWTAIITAYAAHGDASLALGLYAQ 357
+ VA I TY K G + A+ VF+ R++V W ++ AY+ G+A A GLY
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
ML +PD T + +C + + + ++ ++ G +E + + S++
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
+A+ + ++ + +W +++G + GD++
Sbjct: 306 DTC-SARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
R ++R ++ WN I V N ++ L REM+ G +PN T +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 280 SNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAII 339
+++ + VHA+ I+ + +++V TA +D + K + A +VF++ R W A++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---K 396
+ + G A L+ +M + I PD VT+ ++ S +++ K+ MH+ +
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMHAVGIR 181
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI--EPSAKAWGALLNGASVYGD 450
G+ V + + G L ++AK + E + + +W ++ SV+G+
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDL-DSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 266/512 (51%), Gaps = 37/512 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y N L L LF + + + +T +++ +A S K H +++
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI--MACTKLSALHQGKWFHGCLVK 270
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G+E + +L+ Y +CG+I AR+VF+ D V W +MI GY+ G E L
Sbjct: 271 SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSL 330
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +M V + P+ VTI SV+ CG ++L LG VHG + GI D + NA++ MYA
Sbjct: 331 FQKMKGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYA 388
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC A+ +FE SEKD V+ WN++ISG
Sbjct: 389 KCYQNRDAKYVFEMESEKDIVA-------------------------------WNSIISG 417
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY--D 298
QN A+ L M + PN VT+AS + +L G +HAY+++ +
Sbjct: 418 FSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLAS 477
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
+++V TA++D YAK G AR +FD ++ + W+A+I Y GD +L L+ +M
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM 537
Query: 359 LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
L +P++ T T++L+AC H+G+V+E K F++M+ Y P + Y CMV +L+RAG+
Sbjct: 538 LKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGE 597
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
L +A I +MPI+P + +GA L+G ++ + G+ + ++ P+ + Y++++NL
Sbjct: 598 LEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL 657
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
Y+ GRW +A VR M++ G+ KI G S +E
Sbjct: 658 YASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 206/457 (45%), Gaps = 48/457 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML Y N ++ L+ + G D + LKA K+ HC +++
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE--LQDLDNGKKIHCQLVK 170
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
D V L+ Y +CGEI A KVF+ + R+ V W SMI GY + EE L
Sbjct: 171 VP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M +V+ + T +++ AC + L G HG + +SGIE+ L +++ MY
Sbjct: 230 FNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG + AR +F E S D V + ++I GY G V +A +F
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF----------------- 331
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR-RCYDQ 299
++M+G +KPN VT+AS + NL G+ VH +I+ +D
Sbjct: 332 --------------QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT 377
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
N VA A++ YAK A+ VF+ + +V W +II+ ++ +G AL L+ +M
Sbjct: 378 N--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGI--QPLVEQYACMVGVLS 414
+ P+ VT+ ++ +ACA G + + +++H+ K G V ++ +
Sbjct: 436 SESVTPNGVTVASLFSACASLG----SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 415 RAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+ G ++A+ I + E + W A++ G GD
Sbjct: 492 KCGD-PQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 223/506 (44%), Gaps = 68/506 (13%)
Query: 34 TSVLKAIASPSF------SYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR 87
+S+ A +SP F + ++++H + GL DI + LV+ Y G AR
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 88 KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
VFD +PE D W M+ Y E +LY ++L D + ++AC +
Sbjct: 97 LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTEL 155
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
+DL G ++H + + D + ++ MYAKCG + A ++F +++ ++ V
Sbjct: 156 QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVV------ 208
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
W ++I+G V+N+ E + L M+ + + N
Sbjct: 209 -------------------------CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY 243
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T + I + S L GK H ++ + + + T+++D Y K G I AR+VF++
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD--E 385
LV+WTA+I Y +G + AL L+ +M I+P+ VT+ +VL+ C GL++ E
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIENLE 360
Query: 386 AWKIFNTMHSKYGI------QPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWG 439
+ + + K GI LV YA + AK++ EM E AW
Sbjct: 361 LGRSVHGLSIKVGIWDTNVANALVHMYA--------KCYQNRDAKYVFEMESEKDIVAWN 412
Query: 440 ALLNGASVYGDVETGKFACDHLFEIEPES-SGNYIIMANLYS-CA--GRWEEASRVRKRM 495
++++G S G + F + ES + N + +A+L+S CA G S +
Sbjct: 413 SIISGFSQNGSIHEALFL---FHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 496 EEIGVHKIRGSSWIEMSGRLIAFIAK 521
++G SS + + L+ F AK
Sbjct: 470 VKLG---FLASSSVHVGTALLDFYAK 492
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
L E GS L A + L S +N+ ++ H +I +AT ++ Y
Sbjct: 30 LTEENDGSSLHYAASS--PCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYG 87
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
G+ AR VFDQ +W ++ Y + ++ + LY ++ G + D + +
Sbjct: 88 FFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSK 147
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL---SRAGKLSEAAKFISEM 429
L AC +D KI H + P + + G+L ++ G++ A K +++
Sbjct: 148 ALKACTELQDLDNGKKI----HCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVFNDI 202
Query: 430 PIEPSAKAWGALLNG 444
+ + W +++ G
Sbjct: 203 TLR-NVVCWTSMIAG 216
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 274/503 (54%), Gaps = 7/503 (1%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEI--GLARKVFDGMPERDTVSWNSMIGGY 108
+K+ H VLR+GL+ ++ L+ + G AR+V + + R+ W ++I GY
Sbjct: 65 IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
+ G ++E +Y M + P T ++++ACG KDL LG + H
Sbjct: 125 AIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN 228
+ + N +I MY KC S+D AR++F+EM E+D +S+ +I+ Y G + A ++F +
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
+ W A+++G QN + A++ M+ SG++ + VT+A I + +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 289 HAYAIRRCYD--QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
A + Y ++ + +A+ID Y+K G + A VF ++++ ++++I A HG
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 347 DASLALGLYAQML-DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
A AL L+ M+ + I+P+ VT L AC+HSGLVD+ ++F++M+ +G+QP +
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 406 YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIE 465
Y CMV +L R G+L EA + I M +EP WGALL ++ + E + A +HLFE+E
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
Query: 466 PESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW-IEMSGRLIAFIAKDVS 524
P+ GNYI+++N+Y+ AG W RVRK ++E G+ K SW ++ +G++ F +++
Sbjct: 484 PDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLN 543
Query: 525 NERSDEIYTYLEGLFCMMREEGY 547
+ S++I LE L + GY
Sbjct: 544 HPMSNKIQDKLEELVERLTVLGY 566
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 24/360 (6%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
Y+ G + + ++ I+P SFT +++LKA + A F L RG
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL-RGF- 181
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
++V N ++ Y +C I ARKVFD MPERD +SW +I Y++ G E L+ +
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
+ D V +++ Q+ +E + +SGI D I+ A+ G+
Sbjct: 242 PT-----KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 185 LDYARELFE-----EMSEKDDVSYGS-IISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
YA + S D V GS +I Y G V +A +VF M N + T++++I
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 239 SGMVQNNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEV-----HAYA 292
G+ + + A+ L M + +KPN VT + S+ + G++V +
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL-VIWTAIITAYAAHGDASLA 351
++ D T ++D + G + A ++ +W A++ A H + +A
Sbjct: 417 VQPTRDH----YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG--ARQVFDQARSRSLVIWTAI 338
NL K++H + +R+ DQ+ Y+ T +I T KLG AR+V + + R+ +WTA+
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
I YA G A+ +Y M I P T +A+L AC ++ + G
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
V M+ + + + A K EMP E +W L+ + G++E
Sbjct: 181 F-CFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAYARVGNMECAA--- 235
Query: 459 DHLFEIEPESSG-NYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
LFE P + M ++ + +EA RME+ G+
Sbjct: 236 -ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 278/512 (54%), Gaps = 10/512 (1%)
Query: 32 TVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFD 91
T+ SVL++ + + V H ++R + D FV L+ + A VF
Sbjct: 31 TLISVLRSCKNIAH-----VPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 92 GMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLV 151
+ + + +MI G+ G + LY M+ SV+PD I SV++AC DL
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIH-NSVLPDNYVITSVLKAC----DLK 140
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
+ E+H V + G + ++ +Y K G L A+++F+EM ++D V+ +I+ Y
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
GF+ +A ++F+ ++ W A+I G+V+N A++L REMQ + N T
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
+ S L G+ VH++ + + + +V A+I+ Y++ G I+ AR+VF R +
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
++ + +I+ A HG + A+ + M++ G +P+QVTL A+L AC+H GL+D ++FN
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+M + ++P +E Y C+V +L R G+L EA +FI +PIEP G LL+ ++G++
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 452 ETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
E G+ LFE E SG Y++++NLY+ +G+W+E++ +R+ M + G+ K G S IE+
Sbjct: 441 ELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 512 SGRLIAFIAKDVSNERSDEIYTYLEGLFCMMR 543
++ F+ D+++ + IY L+ L ++R
Sbjct: 501 DNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 181/412 (43%), Gaps = 72/412 (17%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+ L+ + + PD++ +TSVLKA K +E H VL+ G + V ++
Sbjct: 112 VSLYHRMIHNSVLPDNYVITSVLKACD------LKVCREIHAQVLKLGFGSSRSVGLKMM 165
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM---------- 124
Y + GE+ A+K+FD MP+RD V+ MI YS+CGF +E L+ ++
Sbjct: 166 EIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTA 225
Query: 125 --------------------LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG 164
+ + +V + T V V+ AC L LG VH FV
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR 285
Query: 165 IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFR 224
+E+ + NA+I MY++CG ++ AR +F M +KD +SY ++ISG +G V+A + FR
Sbjct: 286 MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
M N G +PN VTL + + S+ L
Sbjct: 346 DMVN-------------------------------RGFRPNQVTLVALLNACSHGGLLDI 374
Query: 285 GKEVHAYAIRRCYD--QNIYVATAIIDTYAKLGFIHGA-RQVFDQARSRSLVIWTAIITA 341
G EV +++R ++ I I+D ++G + A R + + ++ +++A
Sbjct: 375 GLEVFN-SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSA 433
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM 393
HG+ L + ++ +S PD T + A SG E+ +I +M
Sbjct: 434 CKIHGNMELGEKIAKRLFESE-NPDSGTYVLLSNLYASSGKWKESTEIRESM 484
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 283/530 (53%), Gaps = 9/530 (1%)
Query: 14 LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETD-IFVENA 72
+L +V A S S + + L+ I + S + +K+ H +++ GL +D +
Sbjct: 5 ILSFSGVTVPAMPSSGSLSGNTYLRLIDTQC-STMRELKQIHASLIKTGLISDTVTASRV 63
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML-SVGSVV 131
L C ++ A VF + ++ WN++I G+S+ F E ++++ML S SV
Sbjct: 64 LAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVK 123
Query: 132 PDGVTIVSVMQA---CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
P +T SV +A GQ++D G ++HG V + G+E D + N ++ MY CG L A
Sbjct: 124 PQRLTYPSVFKAYGRLGQARD---GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
+F M D V++ S+I G+ G + +A+++F M +WN++ISG V+N F+
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
A+D+ REMQ +KP+ T+ S + +Y G+ +H Y +R ++ N V TA+I
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
D Y K G I VF+ A + L W ++I A +G A+ L++++ SG++PD V
Sbjct: 301 DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV 360
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
+ VLTACAHSG V A + F M KY I+P ++ Y MV VL AG L EA I
Sbjct: 361 SFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN 420
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
MP+E W +LL+ G+VE K A L +++P+ + Y++++N Y+ G +EEA
Sbjct: 421 MPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
R M+E + K G S IE+ + FI+ ++ +S EIY+ L+ L
Sbjct: 481 VEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ + NG ++ LD+F + + PD FT+ S+L A A S + + H +++R
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS--EQGRWIHEYIVR 286
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
E + V AL+ YC+CG I VF+ P++ WNSMI G + GF E L
Sbjct: 287 NRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDL 346
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ E+ G + PD V+ + V+ AC S ++ E + E IE + ++ +
Sbjct: 347 FSELERSG-LEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Query: 180 AKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKAR 220
G L+ A L + M E+D V + S++S G V A+
Sbjct: 406 GGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 265/495 (53%), Gaps = 40/495 (8%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H ++ G+ + LVT Y CG++ ARKVFD MP+RD MIG ++ G+Y
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYY 98
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+E + EM G + D + S+++A D G +H V + E D + ++
Sbjct: 99 QESLDFFREMYKDG-LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPG 230
+I MY+K G + AR++F ++ E+D V + ++ISGY +A ++ + M+ P
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 231 LDTWNALISG-----------------------------------MVQNNWFEGAIDLVR 255
+ TWNALISG +V N E A D +
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+M GL PN+ T+ + +P + + ++ GKE+H Y++ + + +V +A++D Y K G
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
FI A +F + ++ V + ++I YA HG A A+ L+ QM +G + D +T TA+LT
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
AC+H+GL D +F M +KY I P +E YACMV +L RAGKL EA + I M +EP
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 436 KAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
WGALL +G++E + A HL E+EPE+SGN +++ +LY+ AG WE R++K +
Sbjct: 458 FVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMI 517
Query: 496 EEIGVHKIRGSSWIE 510
++ + GSSW+E
Sbjct: 518 KKKRFRRFLGSSWVE 532
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
+LS+GS V +++A G+ + G +H + SGI + ++ Y +C
Sbjct: 12 RLLSIGSYV-------ELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVEC 64
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G + AR++F+EM ++D ISG + +I
Sbjct: 65 GKVLDARKVFDEMPKRD-------ISGCV------------------------VMIGACA 93
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+N +++ ++D REM GLK +A + S + + GK +H ++ Y+ + +
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ +++ID Y+K G + AR+VF + LV++ A+I+ YA + A AL L M G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 363 IQPDQVTLTAVLTACAH 379
I+PD +T A+++ +H
Sbjct: 214 IKPDVITWNALISGFSH 230
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 56/398 (14%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ A + NG Y+ LD F G+ D+F V S+LKA S + + K HC VL+
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA--SRNLLDREFGKMIHCLVLK 145
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
E+D F+ ++L+ Y + GE+G ARKVF + E+D V +N+MI GY+ +E L
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 121 YMEMLSVGSVVPDGVT-------------------IVSVMQACGQSKDLV-----LGMEV 156
+M +G + PD +T I+ +M G D+V + V
Sbjct: 206 VKDMKLLG-IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLV 264
Query: 157 HGFVNESGIEV--------DLPLCNAVIAMYAKCGSLDYARELFEEMS-------EKDDV 201
H F NE + P +I + C +L Y + E E
Sbjct: 265 HNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGF 324
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
+++ Y GF+ +A +FR T+N++I + + A++L +M+ +G
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATG 384
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA-------KL 314
K + +T + + S+ G+ + QN Y ++ YA +
Sbjct: 385 EKLDHLTFTAILTACSHAGLTDLGQNLFLLM------QNKYRIVPRLEHYACMVDLLGRA 438
Query: 315 GFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDASLA 351
G + A ++ R L +W A++ A HG+ LA
Sbjct: 439 GKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/584 (30%), Positives = 285/584 (48%), Gaps = 76/584 (13%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY+ N LDL+ +++G+ P +T VLKA A K H V
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAG--LRAIDDGKLIHSHVNC 131
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
TD++V ALV Y +CGE+ +A KVFD MP+RD V+WN+MI G+S + L
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+++M + + P+ TIV + A G++ L G VHG+ G DL + ++ +YA
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 181 --KC-------GSLDYAR----------------------ELFEEMSEKDDVS------- 202
KC LD+ + E+F +M D+V+
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 203 ---------YGSIISGYMAYGFVVKAR----------------------DVFRGMENPGL 231
+G + G + + VKA D FR GL
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 232 D---TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
++N+LI+G V N E + L EM+ SG++P+ TL + S+ + L G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H Y + Y N + A++D Y K G + A++VFD R +V W ++ + HG
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM-HSKYGIQPLVEQYA 407
AL L+ M ++G+ PD+VTL A+L+AC+HSGLVDE ++FN+M + + P ++ Y
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
CM +L+RAG L EA F+++MP EP + G LL+ Y + E G + + E
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GE 610
Query: 468 SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
++ + ++++N YS A RWE+A+R+R ++ G+ K G SW+++
Sbjct: 611 TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 154/335 (45%), Gaps = 42/335 (12%)
Query: 55 HCFVLRRGL---ETDIFVENALVTCYCRCGEIGLARKVFDGMPER--DTVSWNSMIGGYS 109
H +L+R L + + V L Y C E+ LAR VFD +P + ++W+ MI Y+
Sbjct: 22 HQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYA 79
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
F E+ LY +ML+ G V P T V++AC + + G +H VN S D+
Sbjct: 80 SNDFAEKALDLYYKMLNSG-VRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDM 138
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
+C A++ YAKCG L+ A ++F+EM ++D V+
Sbjct: 139 YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA--------------------------- 171
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
WNA+ISG + I L +M+ GL PN T+ P LR GK V
Sbjct: 172 ----WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H Y R + ++ V T I+D YAK I AR+VFD ++ V W+A+I Y +
Sbjct: 228 HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 349 SLALGLYAQML--DSGIQPDQVTLTAVLTACAHSG 381
A ++ QML D+ V + +L CA G
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFG 322
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 167/404 (41%), Gaps = 70/404 (17%)
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVD--LPLCNAVIAMYAKCGSLDYARELFEEM 195
+S+++ C +S++LVLG +H + + + + L N + +YA C ++ AR +F+E+
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEI 61
Query: 196 SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVR 255
NP W+ +I N++ E A+DL
Sbjct: 62 PHPR---------------------------INP--IAWDLMIRAYASNDFAEKALDLYY 92
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+M SG++P T + + + GK +H++ + ++YV TA++D YAK G
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD-SGIQPDQVTLTAVL 374
+ A +VFD+ R +V W A+I+ ++ H + +GL+ M G+ P+ T+ +
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMF 212
Query: 375 TACAHSGLVDEAWKIF---------NTMHSKYGIQPLVEQYAC----------------- 408
A +G + E + N + K GI + + C
Sbjct: 213 PALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEV 272
Query: 409 ----MVGVLSRAGKLSEAAKFISEMPIEPSAK-----AWGALLNGASVYGDVETGKFACD 459
M+G + EA + +M + + A G +L G + +GD+ G+ C
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR--CV 330
Query: 460 HLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKI 503
H + ++ + + + S ++ ++ EIG+ +
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 284/557 (50%), Gaps = 35/557 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ + NG + L LF+ GI P+ FT ++ LKA + + + H F L+
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL--LNALEKGLQIHGFCLK 135
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G E + V N+LV Y +CG I A KVF + +R +SWN+MI G+ G+ +
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 121 YMEMLSVG-SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ M PD T+ S+++AC + + G ++HGF+ SG +A I
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP---SSATIT-- 250
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
GS++ Y+ G++ AR F ++ + +W++LI
Sbjct: 251 ------------------------GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G Q F A+ L + +Q + ++ L+S I +F+ F+ LR GK++ A A++
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
V +++D Y K G + A + F + + + ++ WT +IT Y HG ++ ++ +ML
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
I+PD+V AVL+AC+HSG++ E ++F+ + +GI+P VE YAC+V +L RAG+L
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA I MPI+P+ W LL+ V+GD+E GK L I+ ++ NY++M+NLY
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
AG W E R+ G+ K G SW+E+ + F + + S+ + I L+
Sbjct: 527 GQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAE 586
Query: 540 CMMREE-GYI--LQEEL 553
+REE GY+ L+ EL
Sbjct: 587 RRLREELGYVYGLKHEL 603
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 225/486 (46%), Gaps = 79/486 (16%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ HC++L+ G ++ N L+ YC+C E +A KVFD MPER+ VSW++++ G+ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+ L+ EM G + P+ T + ++ACG L G+++HGF + G E+ + +
Sbjct: 87 DLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N+++ MY+KCG ++ A ++F + ++ +S+ ++I+G++ G+ KA D F M+ +
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+P+ TL S + S + GK++H +
Sbjct: 206 E-----------------------------RPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 293 IRRCYD--QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
+R + + + +++D Y K G++ AR+ FDQ + ++++ W+++I YA G+
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACA-------------------------------- 378
A+GL+ ++ + Q D L++++ A
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 379 ---HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIE 432
GLVDEA K F M K I + ++ + G ++ + EM IE
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVI-----SWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 433 PSAKAWGALLNGASVYGDVETGKFACDHLFE---IEPESSGNYIIMANLYSCAGRWEEAS 489
P + A+L+ S G ++ G+ L E I+P +Y + +L AGR +EA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE-HYACVVDLLGRAGRLKEAK 470
Query: 490 RVRKRM 495
+ M
Sbjct: 471 HLIDTM 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
G +VH Y ++ N+ + +ID Y K A +VFD R++V W+A+++ +
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
+GD +L L+++M GI P++ T + L AC +++ +I + K G + +VE
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI-HGFCLKIGFEMMVE 143
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+V + S+ G+++EA K + ++ S +W A++ G
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 284/538 (52%), Gaps = 54/538 (10%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E ++ N LV+ Y + I AR VF+ MPER+ VSW +M+ GY Q G E + L+
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 124 M---------LSVGSVVPDG-------VTIVSVMQACGQSKDLVLGMEVHGFVNESGI-- 165
M + G ++ DG + + ++ S +++ G+ G V+E+ +
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 166 ----EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY----------- 210
E ++ +I Y + +D AR+LFE M EK +VS+ S++ GY
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 211 ---------------MAYGF-----VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
M GF + KAR VF ME+ TW +I + + A
Sbjct: 256 FFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEA 315
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+DL +MQ G++P+ +L S + + + ++L+ G++VHA+ +R +D ++YVA+ ++
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
Y K G + A+ VFD+ S+ +++W +II+ YA+HG AL ++ +M SG P++VTL
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
A+LTAC+++G ++E +IF +M SK+ + P VE Y+C V +L RAG++ +A + I M
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 431 IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASR 490
I+P A WGALL + ++ + A LFE EP+++G Y++++++ + +W + +
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAV 555
Query: 491 VRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDE-IYTYLEGLFCMMREEGY 547
VRK M V K G SWIE+ ++ F + N I LE ++RE GY
Sbjct: 556 VRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 151/345 (43%), Gaps = 31/345 (8%)
Query: 57 FVLRRGLETDIFVENAL-VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYE 115
+LRR T V + ++ R G+I ARK FD + + SWNS++ GY G +
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 116 ECKRLYMEMLSVGSVVPDG-----------VTIVSVMQACGQSKDLVLGMEVHGFVNESG 164
E ++L+ EM V +G V +V + + + V G++ E
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 165 I-EVD-----LPLCNAV--IAMYAKC---GSLDYARELFEEMSEKDDVSYGSIISGYMAY 213
+ E + +P N V M+ G +D AR+L++ M KD V+ ++I G
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
G V +AR +F M + TW +I+G QNN + A L M P ++ T
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKTEVSWTS 239
Query: 274 PLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV 333
L Y L G E + + A+I + ++G I AR+VFD R
Sbjct: 240 MLLGY--TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 334 IWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
W +I AY G AL L+AQM G++P +L ++L+ CA
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AY G LDLFA G+ P ++ S+L A+ + Y ++ H ++R
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG--RQVHAHLVR 359
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ D++V + L+T Y +CGE+ A+ VFD +D + WNS+I GY+ G EE ++
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAMY 179
+ EM S G+ +P+ VT+++++ AC + L G+E+ ++ + + + + M
Sbjct: 420 FHEMPSSGT-MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 180 AKCGSLDYARELFEEMSEKDDVS-YGSII 207
+ G +D A EL E M+ K D + +G+++
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALL 507
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 26/276 (9%)
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N++++ Y G AR+LF+EMSE++ VS+ ++SGY+ +V+AR+VF M +
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+W A++ G +Q A L M P ++ T+ + R K
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKA----- 160
Query: 293 IRRCYD----QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
R+ YD +++ +T +I + G + AR +FD+ R R++V WT +IT Y +
Sbjct: 161 -RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
+A L+ M + +V+ T++L SG +++A + F M K P++ A
Sbjct: 220 DVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAM 271
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+VG G++S+A + M +A W ++
Sbjct: 272 IVG-FGEVGEISKARRVFDLMEDRDNA-TWRGMIKA 305
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 266/486 (54%), Gaps = 8/486 (1%)
Query: 44 SFSYYKPVKEAHCFVLRRGLETDIFVENALV-------TCYCRCGEIGLARKVFDGMPER 96
S S + +K H F+LR L +D+FV + L+ T +G A +F +
Sbjct: 21 SCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNP 80
Query: 97 DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV 156
+ +N +I +S + Y +ML + PD +T +++A + + +++G +
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 157 HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFV 216
H + G + D+ + N+++ MYA CG + A +F +M +D VS+ S+++GY G V
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 217 VKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
AR++F M + L TW+ +I+G +NN FE AIDL M+ G+ N + S I
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWT 336
++ L G+ + Y ++ N+ + TA++D + + G I A VF+ + W+
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 337 AIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
+II A HG A A+ ++QM+ G P VT TAVL+AC+H GLV++ +I+ M
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKF 456
+GI+P +E Y C+V +L RAGKL+EA FI +M ++P+A GALL +Y + E +
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 457 ACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLI 516
+ L +++PE SG Y++++N+Y+CAG+W++ +R M+E V K G S IE+ G++
Sbjct: 440 VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKIN 499
Query: 517 AFIAKD 522
F D
Sbjct: 500 KFTMGD 505
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 291/558 (52%), Gaps = 42/558 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ + + F V G SP+ FT++SVLK+ + Y + H V++
Sbjct: 82 MITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGAL--VHGVVVK 139
Query: 61 RGLETDIFVENALVTCYCRCG-EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G+E ++V+NA++ Y C + A +F + ++ V+W ++I G++ G +
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 120 LYMEML-SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
+Y +ML V P +TI ++A + G ++H V + G + +LP+ N+++ +
Sbjct: 200 MYKQMLLENAEVTPYCITIA--VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
Y +CG ++ +A+ F ME+ L TWN LI
Sbjct: 258 YCRCG-------------------------------YLSEAKHYFHEMEDKDLITWNTLI 286
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
S + +++ E A+ + + + G PN T S + + + L G+++H RR ++
Sbjct: 287 SELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
+N+ +A A+ID YAK G I +++VF + R+LV WT+++ Y +HG + A+ L+ +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
M+ SGI+PD++ AVL+AC H+GLV++ K FN M S+YGI P + Y C+V +L RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYG-DVETGKFACDHLFEIEPESSGNYIIMA 476
K+ EA + + MP +P WGA+L + + + A + E++P+ G Y++++
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 477 NLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
+Y+ G+W + +RVRK M +G K G SWI + ++ +F D + +Y+ L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 537 GLFCMMREEGYILQEELD 554
L RE GY+ ELD
Sbjct: 586 LLIEETREAGYV--PELD 601
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 211/442 (47%), Gaps = 51/442 (11%)
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
L+ Y G + AR +FD MP+RD V+W +MI GY+ + + EM+ G+ P
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT-SP 109
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG-SLDYAREL 191
+ T+ SV+++C K L G VHG V + G+E L + NA++ MYA C +++ A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F ++ K+DV++ ++I+G+ G + +++ M
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM------------------------- 204
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
++ + + P +T+A + + ++ GK++HA I+R + N+ V +I+D Y
Sbjct: 205 ----LLENAEVTPYCITIA--VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
+ G++ A+ F + + L+ W +I+ D+S AL ++ + G P+ T T
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFT 317
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
+++ ACA+ ++ ++ + + G VE ++ + ++ G + ++ + E+
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFE------IEPESSGNYIIMANLYSC--AG 483
+ +W +++ G YG G A + LF+ I P+ + MA L +C AG
Sbjct: 377 RRNLVSWTSMMIG---YGSHGYGAEAVE-LFDKMVSSGIRPD---RIVFMAVLSACRHAG 429
Query: 484 RWEEASRVRKRME-EIGVHKIR 504
E+ + ME E G++ R
Sbjct: 430 LVEKGLKYFNVMESEYGINPDR 451
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
+K + ++I Y G V +AR +F M + + W A+I+G +N+ A + E
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M G PN TL+S + L G VH ++ + ++YV A+++ YA
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 317 -IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
+ A +F + ++ V WT +IT + GD L +Y QML + +T +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
A A V +I ++ K G Q + ++ + R G LSEA + EM +
Sbjct: 222 ASASIDSVTTGKQIHASV-IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDL 279
Query: 436 KAWGALLN 443
W L++
Sbjct: 280 ITWNTLIS 287
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 289/577 (50%), Gaps = 63/577 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSV-DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
++ YS +GL + + + + D + T+ ++LK S S + K+ H V+
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKL--SSSNGHVSLGKQIHGQVI 166
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ G E+ + V + L+ Y G I A+KVF G+ +R+TV +NS++GG CG E+ +
Sbjct: 167 KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQ 226
Query: 120 LYMEM-----------------------------LSVGSVVPDGVTIVSVMQACGQSKDL 150
L+ M + V + D SV+ ACG +
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAI 286
Query: 151 VLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY 210
G ++H + + + + + +A+I MY KC L YA+ +F+ M +K+ VS
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-------- 338
Query: 211 MAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLA 270
W A++ G Q E A+ + +MQ SG+ P+ TL
Sbjct: 339 -----------------------WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 271 STIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR 330
I + S+L G + H AI + V+ +++ Y K G I + ++F++ R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
V WTA+++AYA G A + L+ +M+ G++PD VTLT V++AC+ +GLV++ + F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
M S+YGI P + Y+CM+ + SR+G+L EA +FI+ MP P A W LL+ G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 451 VETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
+E GK+A + L E++P Y +++++Y+ G+W+ +++R+ M E V K G SWI+
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Query: 511 MSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
G+L +F A D S+ D+IY LE L + + GY
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGY 652
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 245/504 (48%), Gaps = 54/504 (10%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR 87
P++F +++ A A S Y V R + ++F N L+ Y + G I
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARR------VFDRIPQPNLFSWNNLLLAYSKAGLISEME 92
Query: 88 KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
F+ +P+RD V+WN +I GYS G + Y M+ S VT++++++ +
Sbjct: 93 STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSN 152
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
+ LG ++HG V + G E L + + ++ MYA G + A+++F + +++ V Y S++
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
G +A G + A +FRGME + +W A+I G+ QN + AI+ REM+ GLK +
Sbjct: 213 GGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
S +P + GK++HA IR + +IYV +A+ID Y K +H A+ VFD+
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH-------- 379
+ +++V WTA++ Y G A A+ ++ M SGI PD TL ++ACA+
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 380 --------SGL-------------------VDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
SGL +D++ ++FN M+ + + + MV
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV-----SWTAMVSA 446
Query: 413 LSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGKFACDHL---FEIEP 466
++ G+ E + +M ++P +++ S G VE G+ + + I P
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 467 ESSGNYIIMANLYSCAGRWEEASR 490
S G+Y M +L+S +GR EEA R
Sbjct: 507 -SIGHYSCMIDLFSRSGRLEEAMR 529
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 281/544 (51%), Gaps = 35/544 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ YS +L L+ + I PDS T T +KA S + + C +
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLV--LEKGEAVWCKAVD 144
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + D+FV ++++ Y +CG++ A +F M +RD + W +M+ G++Q G +
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y EM + G D V ++ ++QA G D +G VHG++ +G+ +++ + +++ MYA
Sbjct: 205 YREMQNEG-FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
K G ++ A +F M K VS W +LISG
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVS-------------------------------WGSLISG 292
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
QN A + V EMQ G +P+ VTL + S +L+ G+ VH Y ++R
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR 352
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ ATA++D Y+K G + +R++F+ + LV W +I+ Y HG+ + L+ +M +
Sbjct: 353 V-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
S I+PD T ++L+A +HSGLV++ F+ M +KY IQP + Y C++ +L+RAG++
Sbjct: 412 SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVE 471
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
EA I+ ++ + W ALL+G + ++ G A + + ++ P+S G +++N ++
Sbjct: 472 EALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFA 531
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
A +W+E ++VRK M + K+ G S IE++G L F+ +D+S+ + L L
Sbjct: 532 TANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKT 591
Query: 541 MMRE 544
+R+
Sbjct: 592 EIRD 595
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 47/250 (18%)
Query: 287 EVHAYAIRRCYDQN-IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
++HA+ I N ++ +I + ++G I AR+VFD+ R + ++ ++I Y+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV---------------------- 383
+ L LY QM+ IQPD T T + AC SGLV
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVFV 153
Query: 384 --------------DEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
DEA +F M + I + MV ++AGK +A +F EM
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVI-----CWTTMVTGFAQAGKSLKAVEFYREM 208
Query: 430 PIEPSAK---AWGALLNGASVYGDVETGKFACDHLFEIE-PESSGNYIIMANLYSCAGRW 485
E + LL + GD + G+ +L+ P + + ++Y+ G
Sbjct: 209 QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 486 EEASRVRKRM 495
E ASRV RM
Sbjct: 269 EVASRVFSRM 278
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 266/509 (52%), Gaps = 36/509 (7%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
+ H +++ ++ L+ Y +C + ARKV D MPE++ VSW +MI YSQ
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G E ++ EM+ P+ T +V+ +C ++ L LG ++HG + + + + +
Sbjct: 132 GHSSEALTVFAEMMRSDGK-PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
++++ MYAK G + ARE+FE + E RDV
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPE----------------------RDVV-------- 220
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
+ A+I+G Q E A+++ + G+ PN VT AS + S + L GK+ H +
Sbjct: 221 -SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
+RR + ++ID Y+K G + AR++FD R+ + W A++ Y+ HG
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 352 LGLYAQMLDSG-IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS-KYGIQPLVEQYACM 409
L L+ M D ++PD VTL AVL+ C+H + D IF+ M + +YG +P E Y C+
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
V +L RAG++ EA +FI MP +P+A G+LL V+ V+ G+ L EIEPE++
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENA 459
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSD 529
GNY+I++NLY+ AGRW + + VR M + V K G SWI+ L F A D ++ R +
Sbjct: 460 GNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRRE 519
Query: 530 EIYTYLEGLFCMMREEGYILQEELDCEMW 558
E+ ++ + M++ GY+ +L C ++
Sbjct: 520 EVLAKMKEISIKMKQAGYV--PDLSCVLY 546
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 8/245 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS G L +FA + + P+ FT +VL + S K+ H +++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG--KQIHGLIVK 181
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
++ IFV ++L+ Y + G+I AR++F+ +PERD VS ++I GY+Q G EE +
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ + S G + P+ VT S++ A L G + H V + L N++I MY+
Sbjct: 242 FHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN-----PGLDTWN 235
KCG+L YAR LF+ M E+ +S+ +++ GY +G + ++FR M + P T
Sbjct: 301 KCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Query: 236 ALISG 240
A++SG
Sbjct: 361 AVLSG 365
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 35/312 (11%)
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK 198
+++ AC + L G VH + ++ L ++ Y KC L+ AR++ +EM EK
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ 258
+ VS+ ++IS Y G +A VF EM
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVF-------------------------------AEMM 145
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
S KPN T A+ + S L GK++H ++ YD +I+V ++++D YAK G I
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 319 GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
AR++F+ R +V TAII YA G AL ++ ++ G+ P+ VT ++LTA +
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 379 HSGLVDEAWKIF-NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
L+D + + + + +++ ++ + S+ G LS A + MP E +A +
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAIS 322
Query: 438 WGALLNGASVYG 449
W A+L G S +G
Sbjct: 323 WNAMLVGYSKHG 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
LR G+ VHA+ I+ Y Y+ T ++ Y K + AR+V D+ +++V WTA+I+
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
Y+ G +S AL ++A+M+ S +P++ T VLT+C + + +I + K+
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI-VKWNYDS 186
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+ + ++ + ++AG++ EA + +P E + A++ G Y + + A +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLDEEALEMF 242
Query: 462 FEIEPES-SGNYIIMANLYS 480
+ E S NY+ A+L +
Sbjct: 243 HRLHSEGMSPNYVTYASLLT 262
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 259/511 (50%), Gaps = 44/511 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGIS-PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
++ YS L+ + + + G++ PD +T V+K ++ + H VL
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG--QVRVGSSVHGLVL 137
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
R G + D+ V + V Y +C ++ ARKVF MPER+ VSW +++ Y + G EE K
Sbjct: 138 RIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKS 197
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ ++P E +L NA++
Sbjct: 198 MF-------DLMP---------------------------------ERNLGSWNALVDGL 217
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
K G L A++LF+EM ++D +SY S+I GY G +V ARD+F + W+ALI
Sbjct: 218 VKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALIL 277
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD- 298
G QN A + EM +KP+ + + S ++V +Y +R
Sbjct: 278 GYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF 337
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
+ YV A+ID AK G + A ++F++ R LV + +++ A HG S A+ L+ +M
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 359 LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
+D GI PD+V T +L C S LV+E + F M KY I + Y+C+V +LSR GK
Sbjct: 398 VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGK 457
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
L EA + I MP E A AWG+LL G S++G+ E + HLFE+EP+S+G+Y++++N+
Sbjct: 458 LKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNI 517
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
Y+ RW + + +R +M E G+ KI G SWI
Sbjct: 518 YAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 192/402 (47%), Gaps = 45/402 (11%)
Query: 51 VKEAHCFVLRRGLETDI-FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS 109
+ + H ++R+GLE D + + + + + VF+ +P T WN +I GYS
Sbjct: 26 LNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYS 85
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
+ E + M M+ G PD T VM+ C + + +G VHG V G + D+
Sbjct: 86 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 145
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
+ + + Y KC L AR++F EM E++ VS+ +++ Y+ G + +A+ +F M
Sbjct: 146 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER 205
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
L +WNAL+ G+V++ DLV NA L +P
Sbjct: 206 NLGSWNALVDGLVKSG------DLV----------NAKKLFDEMP--------------- 234
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
++I T++ID YAK G + AR +F++AR + W+A+I YA +G +
Sbjct: 235 --------KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPN 286
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA-- 407
A ++++M ++PD+ + +++AC+ G + K+ + +H + + Y
Sbjct: 287 EAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR--MNKFSSHYVVP 344
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
++ + ++ G + AAK EMP + ++ +++ G +++G
Sbjct: 345 ALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 264/528 (50%), Gaps = 34/528 (6%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G Y+ L F+ + D++T LKA A K K H V+ RG T +
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG--LRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
V N+L T Y CGE+ +F+ M ERD VSW S+I Y + G + +++M +
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN-S 304
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V P+ T S+ AC LV G ++H V G+ L + N+++ MY+ CG+L A
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
LF+ M + RD+ +W+ +I G Q + E
Sbjct: 365 SVLFQGM----------------------RCRDII---------SWSTIIGGYCQAGFGE 393
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
M+ SG KP LAS + + + + GG++VHA A+ +QN V +++I
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
+ Y+K G I A +F + +V TA+I YA HG + A+ L+ + L G +PD V
Sbjct: 454 NMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSV 513
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
T +VLTAC HSG +D + FN M Y ++P E Y CMV +L RAG+LS+A K I+E
Sbjct: 514 TFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINE 573
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
M + W LL GD+E G+ A + + E++P + + +AN+YS G EEA
Sbjct: 574 MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEA 633
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLE 536
+ VRK M+ GV K G S I++ + AF++ D + +S++IY LE
Sbjct: 634 ANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 197/442 (44%), Gaps = 40/442 (9%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
VD +SPD+ ++ VLKA S Y + H + ++ L + ++V ++L+ Y R G
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYG--ESLHAYAVKTSLLSSVYVGSSLLDMYKRVG 157
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVM 141
+I + +VF MP R+ V+W ++I G G Y+E + EM S + D T +
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM-SRSEELSDTYTFAIAL 216
Query: 142 QACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV 201
+AC + + G +H V G L + N++ MY +CG + LFE MSE+D V
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
S+ S+I Y G VKA + F M N S
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRN-------------------------------SQ 305
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
+ PN T AS + S L G+++H + + ++ V+ +++ Y+ G + A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
+F R R ++ W+ II Y G ++ M SG +P L ++L+ +
Sbjct: 366 VLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA 425
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGAL 441
++ E + + + +G++ + ++ + S+ G + EA+ E + + A+
Sbjct: 426 VI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIV-SLTAM 483
Query: 442 LNGASVYGDVETGKFACDHLFE 463
+NG + +G K A D LFE
Sbjct: 484 INGYAEHGK---SKEAID-LFE 501
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 207/480 (43%), Gaps = 72/480 (15%)
Query: 49 KPVKEAHCFVLRRGLETDI-FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGG 107
KPV+E ++R + + F N+ + G + AR+VFD MP D VSW S+I
Sbjct: 24 KPVEEN---IVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKR 80
Query: 108 YSQCGFYEECKRLYMEMLSVG-SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
Y +E L+ M V +V PD + V++ACGQS ++ G +H + ++ +
Sbjct: 81 YVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLL 140
Query: 167 VDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
+ + ++++ MY + G +D + +F EM ++ V
Sbjct: 141 SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV------------------------- 175
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
TW A+I+G+V ++ + EM S + T A + + ++ GK
Sbjct: 176 ------TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 287 EVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
+H + I R + + VA ++ Y + G + +F+ R +V WT++I AY G
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAH-SGLV--------------DEAWKIFN 391
A+ + +M +S + P++ T ++ +ACA S LV +++ + N
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 392 TMHSKYGI-------QPLVEQYAC--------MVGVLSRAGKLSEAAKFISEMP---IEP 433
+M Y L + C ++G +AG E K+ S M +P
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 434 SAKAWGALLNGASVYGDVETGK--FACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
+ A +LL+ + +E G+ A F +E S+ ++ N+YS G +EAS +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI-NMYSKCGSIKEASMI 468
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 181/416 (43%), Gaps = 73/416 (17%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+++AY G ++ F ++ + P+ T S+ A AS S + ++ HC VL
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG--EQLHCNVLS 338
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL + V N+++ Y CG + A +F GM RD +SW+++IGGY Q GF EE +
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M G+ P + S++ G + G +VH G+E + + +++I MY+
Sbjct: 399 FSWMRQSGT-KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCGS+ A +F E D VS ++I+GY +G K+++
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHG---KSKE------------------- 495
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL----------FSYFS------NLRG 284
AIDL + G +P++VT S + F YF+ N+R
Sbjct: 496 ---------AIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYA 343
KE + ++D + G + A ++ ++ + V+WT ++ A
Sbjct: 547 AKEHYG---------------CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC---AHSGLVDEAWKIFNTMHSK 396
A GD ++L + D TA++T + +G ++EA + M +K
Sbjct: 592 AKGDIERGRRAAERIL----ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 262/457 (57%), Gaps = 5/457 (1%)
Query: 98 TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ--SKDLVLGME 155
TVSW S I ++ G E + + +M ++ V P+ +T ++++ CG S LG
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 156 VHGFVNESGIEVD-LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYG 214
+HG+ + G++ + + + A+I MY+K G AR +F+ M +K+ V++ ++I GYM G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 215 FVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIP 274
V A +F M L +W A+I+G V+ + E A+ REMQ SG+KP+ V + + +
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
+ L G VH Y + + + N+ V+ ++ID Y + G + ARQVF R++V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH 394
W ++I +AA+G+A +L + +M + G +PD VT T LTAC+H GLV+E + F M
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 395 SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG-DVET 453
Y I P +E Y C+V + SRAG+L +A K + MP++P+ G+LL S +G ++
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 454 GKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSG 513
+ HL ++ +S NY+I++N+Y+ G+WE AS++R++M+ +G+ K G S IE+
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 514 RLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQ 550
+ F+A D ++ + I LE + +R +G +++
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVE 491
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N ++ Y R G++ A K+FD MPERD +SW +MI G+ + G+ EE + EM + V
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGV 202
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD V I++ + AC L G+ VH +V + ++ + N++I +Y +CG +++AR+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F M ++ VS+ S+I G+ A G N E
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANG------------------------------NAHESL 292
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC---YDQNIYVATAI 307
+ R+MQ G KP+AVT + S+ + G + + I +C I +
Sbjct: 293 V-YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG--LRYFQIMKCDYRISPRIEHYGCL 349
Query: 308 IDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDA-SLALGLYAQMLDSGIQ 364
+D Y++ G + A ++ + + V+ +++ A + HG+ LA L + D ++
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVK 408
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 15/249 (6%)
Query: 24 AGISPDSFTVTSVLKA---IASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRC 80
+G+ PD + + L A + + SF + H +VL + + ++ V N+L+ YCRC
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLW-----VHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 81 GEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
G + AR+VF M +R VSWNS+I G++ G E + +M G PD VT
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGA 313
Query: 141 MQACGQSKDLVLGMEVHGFVN-ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK- 198
+ AC + G+ + + I + ++ +Y++ G L+ A +L + M K
Sbjct: 314 LTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKP 373
Query: 199 DDVSYGSIISGYMAYG-FVVKARDVFRGMENPGLDTWN--ALISGM-VQNNWFEGAIDLV 254
++V GS+++ +G +V A + + + + + + + ++S M + +EGA +
Sbjct: 374 NEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMR 433
Query: 255 REMQGSGLK 263
R+M+G GLK
Sbjct: 434 RKMKGLGLK 442
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 272/542 (50%), Gaps = 38/542 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ N + ++LF + GI + T+ +V+ A + + + ++
Sbjct: 144 LIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIW--DCRMLQSLAIK 201
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
LE +FV L+ YC C + ARK+FD MPER+ V+WN M+ GYS+ G E+ + L
Sbjct: 202 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 121 -------------------------------YMEMLSVGSVVPDGVTIVSVMQACGQSKD 149
Y EML G + P V +V ++ A +S
Sbjct: 262 FDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG-MKPSEVMMVDLLSASARSVG 320
Query: 150 LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
G+++HG + + G + L +I YA + A + FE + S ++I+G
Sbjct: 321 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 380
Query: 210 YMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM-QGSGLKPNAVT 268
++ G V +AR+VF + + +WNA+ISG Q+ + A+ L REM S +KP+A+T
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 269 LASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR 328
+ S S +L GK H Y N + AIID YAK G I A +F Q +
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTK 500
Query: 329 ---SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
S ++ W AII A HG A LAL LY+ + I+P+ +T VL+AC H+GLV+
Sbjct: 501 NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVEL 560
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
F +M S +GI+P ++ Y CMV +L +AG+L EA + I +MP++ WG LL+ +
Sbjct: 561 GKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSAS 620
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
+G+VE + A L I+P G ++++N+Y+ AGRWE+ + VR+ M V R
Sbjct: 621 RTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRA 680
Query: 506 SS 507
S
Sbjct: 681 FS 682
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 239/549 (43%), Gaps = 110/549 (20%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR------------------------ 87
++ HC VL+ GL+++ ++ N+++ Y +C + A
Sbjct: 61 RQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRS 120
Query: 88 -------KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
K+FD MPER VS+ ++I GY+Q + E L+ EM ++G ++ + VT+ +V
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG-IMLNEVTLATV 179
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
+ AC + + + +E + + ++ MY C L AR+LF+EM E++
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 239
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
V++ +++GY G + +A ++F + + +W +I G ++ N + A+ EM
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR---CYD------------------- 298
G+KP+ V + + + G ++H ++R CYD
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 299 ---------QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
+I A+I + K G + AR+VFDQ + + W A+I+ YA
Sbjct: 360 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 419
Query: 350 LALGLYAQMLDSG-IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
LAL L+ +M+ S ++PD +T+ +V +A + G ++E + + ++ I P A
Sbjct: 420 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAA 478
Query: 409 MVGVLSRAGKLSEA------------------------------AKF-------ISEMPI 431
++ + ++ G + A AK + +PI
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538
Query: 432 EPSAKAWGALLNGASVYGDVETGK-----FACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
+P++ + +L+ G VE GK DH IEP+ +Y M +L AGR E
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDH--GIEPDIK-HYGCMVDLLGKAGRLE 595
Query: 487 EASRVRKRM 495
EA + K+M
Sbjct: 596 EAKEMIKKM 604
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
+VS + +C S D+ G ++H V +SG++ + +CN+V+ MYAKC L A +F + +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
+ D S+ ++ GY+ + A +F M ++ LI G QNN + A++L RE
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M+ G+ N VTLA+ I S+ + + + + AI+ + ++V+T ++ Y
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
+ AR++FD+ R+LV W ++ Y+ G A L+ Q+ + D V+ ++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDG 279
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
C +DEA ++ T + G++P MV +LS + +
Sbjct: 280 CLRKNQLDEAL-VYYTEMLRCGMKP---SEVMMVDLLSASAR 317
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 278/537 (51%), Gaps = 30/537 (5%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA---HCFVLRRGLETDIFVEN 71
L LF + +G+ D +++ V +A A K + E + ++ L D+ V N
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACA-----LVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
A + Y +C + A +VFD M RD VSWN++I + Q G E L++ ML +
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIE 480
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
PD T S+++AC L GME+H + +SG+ + + ++I MY+KCG ++ A ++
Sbjct: 481 PDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWF 247
++ +VS G M + M N L +WN++ISG V
Sbjct: 540 HSRFFQRANVS------GTM---------EELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E A L M G+ P+ T A+ + + ++ GK++HA I++ ++Y+ + +
Sbjct: 585 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTL 644
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
+D Y+K G +H +R +F+++ R V W A+I YA HG A+ L+ +M+ I+P+
Sbjct: 645 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
VT ++L ACAH GL+D+ + F M YG+ P + Y+ MV +L ++GK+ A + I
Sbjct: 705 VTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Query: 428 EMPIEPSAKAWGALLNGASVY-GDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
EMP E W LL +++ +VE + A L ++P+ S Y +++N+Y+ AG WE
Sbjct: 765 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 487 EASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMR 543
+ S +R+ M + K G SW+E+ L F+ D ++ R +EIY L ++ M+
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 36/378 (9%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D+ N ++ Y + ++ A F+ MP RD VSWNSM+ GY Q G + ++++M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
G + DG T +++ C +D LGM++HG V G + D+ +A++ MYAK
Sbjct: 173 REG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 186 DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
+ +F+ + EK+ VS W+A+I+G VQNN
Sbjct: 232 VESLRVFQGIPEKNSVS-------------------------------WSAIIAGCVQNN 260
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
A+ +EMQ + AS + + S LR G ++HA+A++ + + V T
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
A +D YAK + A+ +FD + + + + A+IT Y+ AL L+ +++ SG+
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 366 DQVTLTAVLTACAHSGLVDEAWKIFN-TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
D+++L+ V ACA + E +I+ + S + V A + + + L+EA +
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFR 438
Query: 425 FISEMPIEPSAKAWGALL 442
EM A +W A++
Sbjct: 439 VFDEMR-RRDAVSWNAII 455
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 191/430 (44%), Gaps = 42/430 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVK---EAHCF 57
ML Y NG +++F GI D T +LK S+ + + H
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC-----SFLEDTSLGMQIHGI 205
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
V+R G +TD+ +AL+ Y + + +VF G+PE+++VSW+++I G Q
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
+ + EM V + V + SV+++C +L LG ++H +S D + A +
Sbjct: 266 LKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLD 324
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MYAKC ++ A+ LF+ EN ++NA+
Sbjct: 325 MYAKCDNMQDAQILFD-------------------------------NSENLNRQSYNAM 353
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
I+G Q A+ L + SGL + ++L+ + L G +++ AI+
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
++ VA A ID Y K + A +VFD+ R R V W AII A+ +G L L+
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
ML S I+PD+ T ++L AC G + +I +++ K G+ ++ + S+ G
Sbjct: 474 MLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCG 531
Query: 418 KLSEAAKFIS 427
+ EA K S
Sbjct: 532 MIEEAEKIHS 541
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%)
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKD 199
V + C + L LG + H + SG + N ++ +Y A +F++M +D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
VS+ +I+GY + KA F M + +WN+++SG +QN +I++ +M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
G++ + T A + + S+ + G ++H +R D ++ A+A++D YAK
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
+ +VF ++ V W+AII + SLAL + +M Q +VL +CA
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 275/539 (51%), Gaps = 34/539 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L Y NG L LF + S D+ T+T+VLKA A K K+ H +L
Sbjct: 161 LLHGYILNGYAEEALRLFK---ELNFSADAITLTTVLKACAE--LEALKCGKQIHAQILI 215
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G+E D + ++LV Y +CG++ +A + + + E D S +++I GY+ CG E + L
Sbjct: 216 GGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGL 275
Query: 121 Y------------------------MEMLSV-----GSVVPDGVTIVSVMQACGQSKDLV 151
+ ME L + D T+ +V+ AC L
Sbjct: 276 FDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLE 335
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
G ++H + G+ D+ + + ++ MY+KCGS A +LF E+ D + S+I Y
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
+ G + A+ VF +EN L +WN++ +G QN ++ +M L + V+L+S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
I + S+L G++V A A D + V++++ID Y K GF+ R+VFD
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
V W ++I+ YA +G A+ L+ +M +GI+P Q+T VLTAC + GLV+E K+F
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+M +G P E ++CMV +L+RAG + EA + EMP + W ++L G G
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 452 ETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
GK A + + E+EPE+S Y+ ++ +++ +G WE ++ VRK M E V K GSSW +
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 239/519 (46%), Gaps = 91/519 (17%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E D + N +V+ + + GE+ +AR++F+ MPE+D V+ NS++ GY G+ EE RL+ E
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
+ + D +T+ +V++AC + + L G ++H + G+E D + ++++ +YAKCG
Sbjct: 181 L----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
L A + E++ E DD S ++ISGY G V ++R +F N + WN++ISG +
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA 296
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
NN A+ L EM+ + ++ TLA+ I L GK++H +A + +I V
Sbjct: 297 NNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVV 355
Query: 304 ATAIIDTYAKLGF-------------------------------IHGARQVFDQARSRSL 332
A+ ++D Y+K G I A++VF++ ++SL
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 333 VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA-------------- 378
+ W ++ ++ +G L + QM + D+V+L++V++ACA
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 379 ---------------------HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
G V+ ++F+TM ++ + M+ + G
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-----VKSDEVPWNSMISGYATNG 530
Query: 418 KLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGK-----FACDHLFEIEPESS 469
+ EA +M I P+ + +L + G VE G+ DH F + E
Sbjct: 531 QGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKE-- 588
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
++ M +L + AG EEA + + M + GS W
Sbjct: 589 -HFSCMVDLLARAGYVEEAINLVEEMP----FDVDGSMW 622
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 259/503 (51%), Gaps = 42/503 (8%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E ++ ++V YCR G++ A ++F MPER+ VSW +MI G++ Y E L++E
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 124 MLS-VGSVVPDGVTIVSVMQACGQ--SKDLVLGMEVHGFVNESGIEV------------- 167
M V +V P+G T++S+ ACG + LG ++H V +G E
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 168 -------------------DLPLCNAVIAMYAKCGSLDYARELFEEM-SEKDDVSYGSII 207
DL CN +I Y K G L+ A LFE + S D VS+ S+I
Sbjct: 348 MYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
GY+ G V +A +F+ + + TW +ISG+VQN F A L+ +M GLKP
Sbjct: 408 DGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNS 467
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRR--CYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
T + + SNL GK +H + CYD ++ + +++ YAK G I A ++F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ + V W ++I + HG A AL L+ +MLDSG +P+ VT VL+AC+HSGL+
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
++F M Y IQP ++ Y M+ +L RAGKL EA +FIS +P P +GALL
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Query: 446 SVY---GDVE-TGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
+ D E + A L E++P ++ ++ + N+Y+ GR + +RK M GV
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
Query: 502 KIRGSSWIEMSGRLIAFIAKDVS 524
K G SW+ ++GR F++ D S
Sbjct: 708 KTPGCSWVVVNGRANVFLSGDKS 730
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 220/485 (45%), Gaps = 70/485 (14%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
+ +RG + +L++ Y + G + AR +F+ MPER+ V+ N+M+ GY +C E
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA 127
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQAC----GQSKDLVLGME-------------VHGFV 160
L+ EM P V +VM G+S+D V + V G +
Sbjct: 128 WTLFREM-------PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLI 180
Query: 161 NESGIEV-----------DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
+E D+ NA+I Y + ++ A+ LF +MSEK+ V++ S++ G
Sbjct: 181 RNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYG 240
Query: 210 YMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG--SGLKPNAV 267
Y YG V +A +F M + +W A+ISG N + A+ L EM+ + PN
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 268 TLASTI----PLFSYFSNLRGGKEVHAYAIRRCY---DQNIYVATAIIDTYAKLGFIHGA 320
TL S L F L G+++HA I + D + +A +++ YA G I A
Sbjct: 301 TLISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+ + ++ S L II Y +GD A L+ ++ D+V+ T+++ +
Sbjct: 359 QSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEA 413
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKA 437
G V A+ +F +H K G+ + M+ L + +EAA +S+M ++P
Sbjct: 414 GDVSRAFGLFQKLHDKDGV-----TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPESSGNY---IIMAN----LYSCAGRWEEASR 490
+ LL+ A +++ GK H+ + +++ Y +I+ N +Y+ G E+A
Sbjct: 469 YSVLLSSAGATSNLDQGK----HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 491 VRKRM 495
+ +M
Sbjct: 525 IFAKM 529
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG--LET 65
N L+ L + V G+ P + T + +L + + S K HC + + +
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS--NLDQGKHIHCVIAKTTACYDP 501
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D+ ++N+LV+ Y +CG I A ++F M ++DTVSWNSMI G S G ++ L+ EML
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCGS 184
G P+ VT + V+ AC S + G+E+ + E+ I+ + ++I + + G
Sbjct: 562 DSGK-KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGK 620
Query: 185 LDYARELFEEMS-EKDDVSYGSII 207
L A E + D YG+++
Sbjct: 621 LKEAEEFISALPFTPDHTVYGALL 644
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 275/524 (52%), Gaps = 39/524 (7%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ DS T + ++K S + + H + G +F+ N L+ Y + +
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYF--NGHRPMMFLVNVLINMYVKFNLLN 113
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
A ++FD MP+R+ +SW +MI YS+C +++ L + ML +V P+ T SV+++C
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSC 172
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
D+ + +H + + G+E D+ + +A+I ++AK G + A +F+EM D +
Sbjct: 173 NGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI--- 226
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
WN++I G QN+ + A++L + M+ +G
Sbjct: 227 ----------------------------VWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
TL S + + + L G + H + ++ YDQ++ + A++D Y K G + A +VF
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
+Q + R ++ W+ +I+ A +G + AL L+ +M SG +P+ +T+ VL AC+H+GL++
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 385 EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ W F +M YGI P+ E Y CM+ +L +AGKL +A K ++EM EP A W LL
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 445 ASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIR 504
V ++ ++A + ++PE +G Y +++N+Y+ + +W+ +R RM + G+ K
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 496
Query: 505 GSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
G SWIE++ ++ AFI D S+ + E+ L L + GY+
Sbjct: 497 GCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYV 540
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 39/285 (13%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AYS +++ L+L + + P+ +T +SVL++ S V+ HC +++
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS-----DVRMLHCGIIK 187
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLE+D+FV +AL+ + + GE A VFD M D + WNS+IGG++Q + L
Sbjct: 188 EGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALEL 247
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M G + + T+ SV++AC L LGM+ H V+ + DL L NA++ MY
Sbjct: 248 FKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYC 304
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCGSL+ A +F +M E+D +++ ++ISG
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISG------------------------------- 333
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
+ QN + + A+ L M+ SG KPN +T+ + S+ L G
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 264/513 (51%), Gaps = 14/513 (2%)
Query: 51 VKEAHCFVLRRGL-ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS 109
+K+ H LR G+ ET ++ L+ + ARK+FD T +N +I Y
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
E LY +LS + P T + A +H SG E D
Sbjct: 59 VHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
C +I YAK G+L AR +F+EMS++D + ++I+GY G + A ++F M
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
+ +W +ISG QN + A+ + M+ +KPN +T+ S +P + L G+ +
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAIITAYAAHGD 347
YA + NIYV A I+ Y+K G I A+++F++ R+L W ++I + A HG
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
AL L+AQML G +PD VT +L AC H G+V + ++F +M + I P +E Y
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
CM+ +L R GKL EA I MP++P A WG LL S +G+VE + A + LF++EP
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 468 SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW-IEMSGRLIAFIAKDVSNE 526
+ GN +IM+N+Y+ +W+ R+RK M++ + K G S+ +E+ + F +D S+
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHP 477
Query: 527 RSDEIYTYLEGLFCMMREE----GYILQEELDC 555
RS EIY LE +F M+ E +LQ E C
Sbjct: 478 RSYEIYQVLEEIFRRMKLEKSRFDSLLQPEQLC 510
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 152/342 (44%), Gaps = 75/342 (21%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
+P++ H R G E+D F L+T Y + G + AR+VFD M +RD WN+MI GY
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 109 -------------------------------SQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
SQ G Y E ++++ M SV P+ +T+
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
VSV+ AC +L +G + G+ E+G ++ +CNA I MY+KCG +D A+ LFEE+
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN 278
Query: 198 KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM 257
+ + L +WN++I + + + A+ L +M
Sbjct: 279 QRN------------------------------LCSWNSMIGSLATHGKHDEALTLFAQM 308
Query: 258 QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA----K 313
G KP+AVT + + + GG V + + ++ ++ + ++ Y
Sbjct: 309 LREGEKPDAVTFVGLL-----LACVHGGMVVKGQELFKSMEE-VHKISPKLEHYGCMIDL 362
Query: 314 LGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLA 351
LG + ++ +D ++ + V+W ++ A + HG+ +A
Sbjct: 363 LGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 266/508 (52%), Gaps = 39/508 (7%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+++V YC+ G I AR +FD M ER+ ++W +MI GY + GF+E+ L++ M G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
+ T+ + +AC G ++HG V+ +E DL L N++++MY+K G + A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD------------------ 232
+F M KD VS+ S+I+G + + +A ++F M PG D
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM--PGKDMVSWTDMIKGFSGKGEIS 389
Query: 233 ---------------TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
TW A+IS V N ++E A+ +M + PN+ T +S + +
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 278 YFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTA 337
++L G ++H ++ ++ V +++ Y K G + A ++F ++V +
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY 397
+I+ Y+ +G AL L++ + SG +P+ VT A+L+AC H G VD WK F +M S Y
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSY 569
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFA 457
I+P + YACMV +L R+G L +A+ IS MP +P + WG+LL+ + + V+ + A
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELA 629
Query: 458 CDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIA 517
L E+EP+S+ Y++++ LYS G+ + R+ + + K GSSWI + G +
Sbjct: 630 AKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHN 689
Query: 518 FIAKDVSNERSDEIYTYLEGLFCMMREE 545
F+A D S +EI L+ M+R+E
Sbjct: 690 FLAGDESQLNLEEIGFTLK----MIRKE 713
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 198/448 (44%), Gaps = 39/448 (8%)
Query: 37 LKAIASPSFSYYKPV-KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPE 95
L+ ++ + S ++P+ ++ F+ T IF N+ ++ + R G + A +F M
Sbjct: 19 LRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSN 78
Query: 96 RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC--GQSKDLVLG 153
R VSW +MI Y++ G + +++ EM + + + + C G++ +L
Sbjct: 79 RSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCD 138
Query: 154 ME----------VHGFVN------------ESGIEV-DLPLCNAVIAMYAKCGSLDYARE 190
+ + GFV E+ ++ D N +++ Y + G + A
Sbjct: 139 IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVR 198
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F+ M+ K+ VS S++ GY G +V AR +F M + TW A+I G + +FE
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 251 IDLVREMQGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
L M+ G +K N+ TLA F R G ++H R + ++++ +++
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y+KLG++ A+ VF +++ V W ++IT S A L+ +M D V+
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVS 374
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
T ++ + G + + ++F M K I + M+ G EA + +M
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKM 429
Query: 430 ---PIEPSAKAWGALLNGASVYGDVETG 454
+ P++ + ++L+ + D+ G
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEG 457
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ A+ NG Y L F + + P+S+T +SVL A AS + + H V++
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS--LADLIEGLQIHGRVVK 466
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ D+ V+N+LV+ YC+CG A K+F + E + VS+N+MI GYS GF ++ +L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ ML P+GVT ++++ AC + LG + + S IE ++ +
Sbjct: 527 F-SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 180 AKCGSLDYARELFEEMSEKDDVS-YGSIISG 209
+ G LD A L M K +GS++S
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 295/647 (45%), Gaps = 111/647 (17%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AYS +R + LF + G+ PD F +L+ A+ + K H V++
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN--CGDVEAGKVIHSVVIK 209
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNS----------------- 103
G+ + + V N+++ Y +CGE+ A K F M ERD ++WNS
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 104 ------------------MIGGYSQCGFYEECKRLYMEMLSVG----------------- 128
+IGGY+Q G + L +M + G
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 129 -----------------SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
VVP+ VTI+S + AC K + G EVH + G D+ +
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
N+++ MY+KCG L+ AR++F+ + KD ++ S+I+GY G+ KA ++F M++ L
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 232 D----------------------------------------TWNALISGMVQNNWFEGAI 251
TWN +I+G +QN + A+
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
+L R+MQ S PN+VT+ S +P + + +E+H +RR D V A+ DTY
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
AK G I +R +F ++ ++ W ++I Y HG AL L+ QM GI P++ TL+
Sbjct: 570 AKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 629
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
+++ A G VDE K+F ++ + Y I P +E + MV + RA +L EA +FI EM I
Sbjct: 630 SIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI 689
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
+ W + L G ++GD++ A ++LF +EPE++ I++ +Y+ + +
Sbjct: 690 QSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEG 749
Query: 492 RKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
K + + K G SWIE+ + F D S +D +Y +E +
Sbjct: 750 NKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKM 796
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 206/405 (50%), Gaps = 40/405 (9%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E D+FVE L++ Y +CG I ARKVFD M ER+ +W++MIG YS+ + E +L+
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M+ G V+PD ++Q C D+ G +H V + G+ L + N+++A+YAKCG
Sbjct: 172 MMKDG-VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWN---- 235
LD+A + F M E+D +++ S++ Y G +A ++ + ME +PGL TWN
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 236 -------------------------------ALISGMVQNNWFEGAIDLVREMQGSGLKP 264
A+ISG++ N A+D+ R+M +G+ P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
NAVT+ S + S + G EVH+ A++ + ++ V +++D Y+K G + AR+VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
D +++ + W ++IT Y G A L+ +M D+ ++P+ +T +++ +G
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 385 EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
EA +F M +Q + ++ + GK EA + +M
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G + +AR F +E D ++S Y G + AR VF M L TW+A+I
Sbjct: 100 GRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYS 157
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+ N + L R M G+ P+ + + ++ GK +H+ I+ +
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
V+ +I+ YAK G + A + F + R R ++ W +++ AY +G A+ L +M G
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
I P VT ++ G D A + M + +GI V + M+ L G +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQA 336
Query: 423 AKFISEM---PIEPSAKAWGALLNGASVYGDVETG----KFACDHLFEIEPESSGNYIIM 475
+M + P+A + ++ S + G A F I+ GN ++
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLV- 394
Query: 476 ANLYSCAGRWEEASRV 491
++YS G+ E+A +V
Sbjct: 395 -DMYSKCGKLEDARKV 409
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 266/506 (52%), Gaps = 37/506 (7%)
Query: 51 VKEAHCFVLRRGLE-TDIFVENALV---TCYCRCGEIGLARKVFDGMPERDTV-SWNSMI 105
+++ H F +R G+ +D + L+ + A KVF + + V WN++I
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
GY++ G LY EM G V PD T +++A D+ LG +H V SG
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
+ + N+++ +YA CG + A ++F++M EKD V+
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA----------------------- 189
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
WN++I+G +N E A+ L EM G+KP+ T+ S + + L G
Sbjct: 190 --------WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
K VH Y I+ +N++ + ++D YA+ G + A+ +FD+ ++ V WT++I A +
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 346 GDASLALGLYAQMLDS-GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
G A+ L+ M + G+ P ++T +L AC+H G+V E ++ F M +Y I+P +E
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEI 464
+ CMV +L+RAG++ +A ++I MP++P+ W LL +V+GD + +FA + ++
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVS 524
EP SG+Y++++N+Y+ RW + ++RK+M GV K+ G S +E+ R+ F+ D S
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481
Query: 525 NERSDEIYTYLEGLFCMMREEGYILQ 550
+ +SD IY L+ + +R EGY+ Q
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 3/198 (1%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
++ NG L L+ GI PD FT+ S+L A A K H ++++ GL
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA--KIGALTLGKRVHVYMIKVGLT 254
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
++ N L+ Y RCG + A+ +FD M ++++VSW S+I G + GF +E L+ M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCG 183
S ++P +T V ++ AC + G E + E IE + ++ + A+ G
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 184 SLDYARELFEEMSEKDDV 201
+ A E + M + +V
Sbjct: 375 QVKKAYEYIKSMPMQPNV 392
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 262/519 (50%), Gaps = 43/519 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS + L + + G SPD FT VLKA + + H FV++
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC--VHGFVVK 135
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G E +++V L+ Y CGE+ +VF+ +P+ + V+W S+I G+ + +
Sbjct: 136 TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN--------ESGIEVDLPLC 172
+ EM S G V + +V ++ ACG+ KD+V G HGF+ +S + ++ L
Sbjct: 196 FREMQSNG-VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
++I MYAKCG L AR LF+ M E+ VS+ SII+GY
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY---------------------- 292
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
QN E A+ + +M G+ P+ VT S I + G+ +HAY
Sbjct: 293 ---------SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+ + ++ + A+++ YAK G A++ F+ + + WT +I A+HG + AL
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 403
Query: 353 GLYAQMLDSG-IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
++ +M + G PD +T VL AC+H GLV+E + F M +G++P VE Y CMV
Sbjct: 404 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
+LSRAG+ EA + + MP++P+ WGALLNG ++ ++E + E E SG
Sbjct: 464 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGI 523
Query: 472 YIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
Y++++N+Y+ AGRW + +R+ M+ V K+ G S +E
Sbjct: 524 YVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 222/498 (44%), Gaps = 91/498 (18%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGE---IGLARKVFDGMPERDTVSWNSMIGG 107
+ + H +++ + ++ + L+ C E + AR VF+ + WNSMI G
Sbjct: 22 LNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRG 81
Query: 108 YSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
YS ++ Y EML G PD T V++AC +D+ G VHGFV ++G EV
Sbjct: 82 YSNSPNPDKALIFYQEMLRKG-YSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV 140
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
++ + ++ MY CG ++Y +FE++ + + V++GS+ISG+
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF----------------- 183
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
V NN F AI+ REMQ +G+K N + + ++ GK
Sbjct: 184 --------------VNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKW 229
Query: 288 VHAYAIRRCYDQ--------NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAII 339
H + +D N+ +AT++ID YAK G + AR +FD R+LV W +II
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH---SK 396
T Y+ +GDA AL ++ MLD GI PD+VT +V+ A ++ ++ ++H SK
Sbjct: 290 TGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA----SMIQGCSQLGQSIHAYVSK 345
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD------ 450
G +V + ++ G A K ++ + AW ++ G + +G
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALS 404
Query: 451 -----VETGK------------FACDH----------------LFEIEPESSGNYIIMAN 477
E G +AC H L +EP + +Y M +
Sbjct: 405 IFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP-TVEHYGCMVD 463
Query: 478 LYSCAGRWEEASRVRKRM 495
+ S AGR+EEA R+ K M
Sbjct: 464 ILSRAGRFEEAERLVKTM 481
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 270/582 (46%), Gaps = 44/582 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML +YS GL++ + LF + PD ++ T++L AS K ++ V+R
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS--LGNVKFGRKIQSLVIR 98
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGM--------------------------- 93
G + V N+L+ Y +C + A KVF M
Sbjct: 99 SGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAAL 158
Query: 94 ------PERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC-GQ 146
P+R +WN MI G++ CG E C L+ EML PD T S+M AC
Sbjct: 159 DVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE-SEFKPDCYTFSSLMNACSAD 217
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
S ++V G VH + ++G + N+V++ Y K GS D A E + VS+ SI
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
I M G KA +VF + TW +I+G +N E A+ EM SG+ +
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+ + S + L GK +H I + YV A+++ YAK G I A + F
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGD 397
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
++ LV W ++ A+ HG A AL LY M+ SGI+PD VT +LT C+HSGLV+E
Sbjct: 398 IANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Query: 387 WKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE----AAKFISEMPIEPSAKAWGALL 442
IF +M Y I V+ CM+ + R G L+E A + S + + +W LL
Sbjct: 458 CMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Query: 443 NGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHK 502
S + E G+ L EP ++++++NLY GRW+E VR+ M E G+ K
Sbjct: 518 GACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKK 577
Query: 503 IRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMRE 544
G SWIE+ ++ F+ D S+ R +E+ E L C+ E
Sbjct: 578 TPGCSWIEVGNQVSTFVVGDSSHPRLEELS---ETLNCLQHE 616
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 37/405 (9%)
Query: 79 RCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIV 138
+ G I AR+VFDGMPE DTV+WN+M+ YS+ G ++E L+ + L PD +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRFSDAKPDDYSFT 74
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM--S 196
+++ C ++ G ++ V SG LP+ N++I MY KC A ++F +M
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
+++V++ S++ YM A DVF M WN +ISG E + L +E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 257 MQGSGLKPNAVTLASTIPLFSY-FSNLRGGKEVHAYAIRRCYD----------------- 298
M S KP+ T +S + S SN+ G+ VHA ++ +
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 299 ---------QNIYVAT-----AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
++I V T +IID K+G A +VF A +++V WT +IT Y
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
+GD AL + +M+ SG+ D AVL AC+ L+ K+ + G Q
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-KMIHGCLIHCGFQGYAY 373
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+V + ++ G + EA + ++ +W +L V+G
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHG 417
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 139/336 (41%), Gaps = 43/336 (12%)
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDT--WNALISGMVQNNWFEGAIDLVREMQ 258
V S I+ G + AR VF GM P LDT WN +++ + + AI L +++
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGM--PELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
S KP+ + + + + N++ G+++ + IR + ++ V ++ID Y K
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 319 GARQVFDQ--ARSRSLVIWTAIITAYA------------------------------AH- 345
A +VF SR+ V W +++ AY AH
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
G L L+ +ML+S +PD T ++++ AC+ ++ + + K G VE
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 406 YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIE 465
++ ++ G +A + + + + +W ++++ G+ E +F +
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQV-SWNSIIDACMKIGETEKAL----EVFHLA 297
Query: 466 PESS-GNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
PE + + M Y G E+A R M + GV
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV 333
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 271/517 (52%), Gaps = 40/517 (7%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKA-IASPSFSYYKPVKEAHCFVLRRGL 63
Y NG + L L + AG P+++T + LKA I +F + K V H +L+
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV---HGQILKTCY 278
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
D V L+ Y + G++ A KVF+ MP+ D V W+ MI + Q GF E L++
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M VVP+ T+ S++ C K LG ++HG V + G ++D+ + NA+I +YAKC
Sbjct: 339 MRE-AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+D A +LF E+S K++VS+ ++I GY EN G
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGY----------------ENLG------------- 428
Query: 244 NNWFEG--AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
EG A + RE + + VT +S + + +++ G +VH AI+ + +
Sbjct: 429 ----EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
V+ ++ID YAK G I A+ VF++ + + W A+I+ Y+ HG AL + M D
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 362 GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE 421
+P+ +T VL+ C+++GL+D+ + F +M +GI+P +E Y CMV +L R+G+L +
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 422 AAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSC 481
A K I +P EPS W A+L+ + + E + + + + +I P+ Y++++N+Y+
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAG 664
Query: 482 AGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAF 518
A +W + +RK M+E+GV K G SWIE G + F
Sbjct: 665 AKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 27/298 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ + NG +DLF +A + P+ FT++S+L A S ++ H V++
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG--EQLHGLVVK 376
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + DI+V NAL+ Y +C ++ A K+F + ++ VSWN++I GY G + +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ E L V + VT S + AC + LG++VHG ++ + + N++I MYA
Sbjct: 437 FREALRNQVSVTE-VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGF---------VVKARD---------- 221
KCG + +A+ +F EM D S+ ++ISGY +G ++K RD
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 222 VFRGMENPGL-DTWNALISGMVQNNWFEGAID----LVREMQGSGLKPNAVTLASTIP 274
V G N GL D M++++ E ++ +VR + SG A+ L IP
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 193/424 (45%), Gaps = 38/424 (8%)
Query: 26 ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGL 85
++P FT S LK S + P H +++ G +++ FV AL+ Y CG +
Sbjct: 144 LNPHVFT--SFLKLFVSLDKAEICP--WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
AR VF+G+ +D V W ++ Y + G++E+ +L + + + +P+ T + ++A
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL-LSCMRMAGFMPNNYTFDTALKASI 258
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
VHG + ++ +D + ++ +Y + G + A ++F EM + D V +
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+I+ + QN + A+DL M+ + + PN
Sbjct: 319 MIARF-------------------------------CQNGFCNEAVDLFIRMREAFVVPN 347
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
TL+S + + G+++H ++ +D +IYV+ A+ID YAK + A ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ S++ V W +I Y G+ A ++ + L + + +VT ++ L ACA +D
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
++ + + K V ++ + ++ G + A +EM A +W AL++G
Sbjct: 468 GVQV-HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA-SWNALISGY 525
Query: 446 SVYG 449
S +G
Sbjct: 526 STHG 529
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 181/411 (44%), Gaps = 62/411 (15%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS-- 109
K HC +L++G D+F N L+ Y + G A +FD MPER+ VS+ ++ GY+
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ 128
Query: 110 -QCGFYEECKRLYMEMLSVGSVVPDGV--TIVSVMQA--CG--QSKDLVLGMEVHGFVNE 162
G Y RL+ E + V VS+ +A C S + LG + + FV
Sbjct: 129 DPIGLYS---RLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185
Query: 163 SGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDV 222
A+I Y+ CGS+D AR +FE + KD V + I+S Y
Sbjct: 186 -----------ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY------------ 222
Query: 223 FRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
V+N +FE ++ L+ M+ +G PN T + +
Sbjct: 223 -------------------VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAY 342
K VH ++ CY + V ++ Y +LG + A +VF++ +V W+ +I +
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA---HSGLVDEAWKIFNTMHSKYGI 399
+G + A+ L+ +M ++ + P++ TL+++L CA SGL ++ + + K G
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ----LHGLVVKVGF 379
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
+ ++ V ++ K+ A K +E+ + +W ++ G G+
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVGYENLGE 429
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 110 QCGFYEECKRLYMEMLSVGSVVP--DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
QCGF + L +E S S++P D ++++ C Q D + +H + + G +
Sbjct: 25 QCGFSVKTAALDLE--SSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCL 82
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
DL N ++ Y K G A LF+EM E+++VS+ ++ GY +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY--------------ACQ 128
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+P I L + G + N S + LF
Sbjct: 129 DP---------------------IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGD 347
+H+ ++ YD N +V A+I+ Y+ G + AR VF+ + +V+W I++ Y +G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF-NTMHSKYGIQPLVEQY 406
+L L + M +G P+ T L A G D A + + + Y + P V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG-- 285
Query: 407 ACMVGVL---SRAGKLSEAAKFISEMP 430
VG+L ++ G +S+A K +EMP
Sbjct: 286 ---VGLLQLYTQLGDMSDAFKVFNEMP 309
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 252/463 (54%), Gaps = 32/463 (6%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
AR +F+ M E D V +NSM GYS+ E L++E+L G ++PD T S+++AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG-ILPDNYTFPSLLKACA 140
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+K L G ++H + G++ ++ +C +I MY +C +D AR +F+ + E
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE-------- 192
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
P + +NA+I+G + N A+ L REMQG LKPN
Sbjct: 193 -----------------------PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
+TL S + + +L GK +H YA + + + + V TA+ID +AK G + A +F+
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ R + W+A+I AYA HG A ++ ++ +M +QPD++T +L AC+H+G V+E
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEE 349
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
K F+ M SK+GI P ++ Y MV +LSRAG L +A +FI ++PI P+ W LL
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAAC 409
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
S + +++ + + +FE++ G+Y+I++NLY+ +WE +RK M++ K+ G
Sbjct: 410 SSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPG 469
Query: 506 SSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
S IE++ + F + D + +++ L+ + ++ GY+
Sbjct: 470 CSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYV 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 14 LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
+ LF ++ GI PD++T S+LKA A + ++ HC ++ GL+ +++V L
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVA--KALEEGRQLHCLSMKLGLDDNVYVCPTL 170
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
+ Y C ++ AR VFD + E V +N+MI GY++ E L+ EM + P+
Sbjct: 171 INMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPN 229
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
+T++SV+ +C L LG +H + + + + A+I M+AKCGSLD A +FE
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
+M KD ++ ++I Y +G K+ +F M + + G++ G ++
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEE 349
Query: 254 VRE-----MQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
R+ + G+ P+ S + L S NL E
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 27/336 (8%)
Query: 176 IAMYAKCGSLDYARELFEEM-----SEKDDVSYGSIISGY---------MAYGFVVKARD 221
I + +KC SL REL + S +DVS+ + + + M+Y AR
Sbjct: 33 ILLISKCNSL---RELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY-----ARH 84
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN 281
+F M P + +N++ G + L E+ G+ P+ T S + +
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
L G+++H +++ D N+YV +I+ Y + + AR VFD+ +V + A+IT
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
YA + AL L+ +M ++P+++TL +VL++CA G +D K + K+
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCK 263
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
V+ ++ + ++ G L +A +M + + +AW A++ + +G E + +
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 462 F--EIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
++P+ ++ + N S GR EE + +M
Sbjct: 323 RSENVQPDEI-TFLGLLNACSHTGRVEEGRKYFSQM 357
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI-----IDTYAKLGFI 317
K + V + I L S ++LR ++ AYAI+ + +VA I T + + +
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY- 81
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
AR +F+ +VI+ ++ Y+ + L+ ++L+ GI PD T ++L AC
Sbjct: 82 --ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
A + ++E ++ + + K G+ V ++ + + + ++A+ + + +EP
Sbjct: 140 AVAKALEEGRQL-HCLSMKLGLDDNVYVCPTLINMYTECEDV-DSARCVFDRIVEPCVVC 197
Query: 438 WGALLNG 444
+ A++ G
Sbjct: 198 YNAMITG 204
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 264/535 (49%), Gaps = 44/535 (8%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
GI PD +T S+LK + S VK+ H + G ++D +V + LVT Y + +
Sbjct: 156 GILPDKYTFPSLLKGSDAMELS---DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVE 212
Query: 85 LARKVFDGMPERD-TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
A+KVFD +P+RD +V WN+++ GYSQ +E+ ++ +M G V TI SV+ A
Sbjct: 213 DAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRH-TITSVLSA 271
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
S D+ G +HG ++G D+ + NA+I MY K L+ A +FE M E+D
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD---- 327
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
L TWN+++ +G + L M SG++
Sbjct: 328 ---------------------------LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAI------RRCYDQNIYVATAIIDTYAKLGFI 317
P+ VTL + +P ++LR G+E+H Y I R+ N ++ +++D Y K G +
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK--SSNEFIHNSLMDMYVKCGDL 418
Query: 318 HGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
AR VFD R + W +I Y LAL +++ M +G++PD++T +L AC
Sbjct: 419 RDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 478
Query: 378 AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
+HSG ++E M + Y I P + YAC++ +L RA KL EA + PI +
Sbjct: 479 SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 438 WGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEE 497
W ++L+ ++G+ + A L E+EPE G Y++M+N+Y AG++EE VR M +
Sbjct: 539 WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQ 598
Query: 498 IGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEE 552
V K G SWI + + F + ++ I+ +L + M Y+ ++
Sbjct: 599 QNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC-NAVIAMYAKCGSLDYARELFEE 194
T ++ +Q C Q KD V G ++HGF+ G D P +++ MYAKCG + A +F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
SE+D Y ++ISG++ G + A + +
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETY------------------------------- 149
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
REM+ +G+ P+ T S + S L K+VH A + +D + YV + ++ +Y+K
Sbjct: 150 REMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKF 208
Query: 315 GFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
+ A++VFD+ R V+W A++ Y+ AL ++++M + G+ + T+T+V
Sbjct: 209 MSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSV 268
Query: 374 LTACAHSGLVDEAWKI 389
L+A SG +D I
Sbjct: 269 LSAFTVSGDIDNGRSI 284
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 267/539 (49%), Gaps = 37/539 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ G +L L G+ PD T + L S + + + HC +++
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV--SGTMCDLEMGRMLHCQIVK 273
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + D+ ++ AL+T Y +CG+ + +V + +P +D V W MI G + G E+ +
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ EML GS + I SV+ +C Q LG VHG+V G +D P N++I MYA
Sbjct: 334 FSEMLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYA 392
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG LD K+ +F M L +WNA+ISG
Sbjct: 393 KCGHLD-------------------------------KSLVIFERMNERDLVSWNAIISG 421
Query: 241 MVQNNWFEGAIDLVREMQGSGLKP-NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
QN A+ L EM+ ++ ++ T+ S + S L GK +H IR
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
V TA++D Y+K G++ A++ FD + +V W +I Y HG +AL +Y++ L
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
SG++P+ V AVL++C+H+G+V + KIF++M +G++P E AC+V +L RA ++
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+A KF E PS G +L+ G E C+ + E++P +G+Y+ + + +
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSF 661
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
+ RW++ S +M +G+ K+ G S IEM+G+ F S+ SD+ + L+ L
Sbjct: 662 AAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLL 718
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 196/426 (46%), Gaps = 40/426 (9%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
GI P T+ +L + + ++ H F + G + DI V N+++ YC+C +G
Sbjct: 142 GIKPGPVTLLEMLSGVLEIT-----QLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
A+ +FD M +RD VSWN+MI GY+ G E +L M G + PD T + +
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG-LRPDQQTFGASLSVS 255
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
G DL +G +H + ++G +VD+ L A+I MY KCG + + + E + KD V +
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
+ISG M G KA VF M G D + I+ +V + G+ DL
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL----------- 364
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
G VH Y +R Y + ++I YAK G + + +F
Sbjct: 365 --------------------GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP-DQVTLTAVLTACAHSGLV 383
++ R LV W AII+ YA + D AL L+ +M +Q D T+ ++L AC+ +G +
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Query: 384 DEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLN 443
K+ + + + I+P +V + S+ G L A + + + +WG L+
Sbjct: 465 -PVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV-SWGILIA 522
Query: 444 GASVYG 449
G +G
Sbjct: 523 GYGFHG 528
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 213/440 (48%), Gaps = 41/440 (9%)
Query: 6 SFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLE 64
S +G ++ +L F+S + + PD+FT S+LKA AS S+ + H VL G
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI---HQQVLVNGFS 78
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
+D ++ ++LV Y + G + ARKVF+ M ERD V W +MIG YS+ G E L EM
Sbjct: 79 SDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM 138
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
G + P VT++ ++ + L +H F G + D+ + N+++ +Y KC
Sbjct: 139 RFQG-IKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
+ A++LF++M ++D VS+ ++ISGY + G
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVG------------------------------ 224
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
N E + L+ M+G GL+P+ T +++ + +L G+ +H ++ +D ++++
Sbjct: 225 NMSE-ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
TA+I Y K G + +V + ++ +V WT +I+ G A AL ++++ML SG
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
+ +V+ +CA G D + + ++G ++ + ++ G L ++
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYV-LRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 425 FISEMPIEPSAKAWGALLNG 444
M E +W A+++G
Sbjct: 403 IFERMN-ERDLVSWNAIISG 421
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 39/356 (10%)
Query: 98 TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVH 157
T +NS I S G +++ + ML+ ++PD T S+++AC + L G+ +H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLA-NKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 158 GFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVV 217
V +G D + ++++ +YAK G L +AR++FEEM E+D V + ++I Y G V
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 218 KARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
+ A LV EM+ G+KP VTL + + S
Sbjct: 130 E-------------------------------ACSLVNEMRFQGIKPGPVTL---LEMLS 155
Query: 278 YFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTA 337
+ + +H +A+ +D +I V ++++ Y K + A+ +FDQ R +V W
Sbjct: 156 GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNT 215
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD-EAWKIFNTMHSK 396
+I+ YA+ G+ S L L +M G++PDQ T A L+ + D E ++ + K
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG--TMCDLEMGRMLHCQIVK 273
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
G + ++ + + GK + + + +P W +++G G E
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAE 328
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
+N+ I+ + + + + M + L P+ T S + + L G +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALG 353
+ + Y+++++++ YAK G + AR+VF++ R R +V WTA+I Y+ G A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 354 LYAQMLDSGIQPDQVTLTAVLTA--------CAHSGLV----DEAWKIFNTMHSKY---- 397
L +M GI+P VTL +L+ C H V D + N+M + Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 398 ---GIQPLVEQ--------YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLN 443
+ L +Q + M+ + G +SE K + M + P + +GA L+
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 444 GASVYGDVETGK 455
+ D+E G+
Sbjct: 254 VSGTMCDLEMGR 265
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 248/500 (49%), Gaps = 44/500 (8%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFVEN 71
L++F V G+ + FT++S +KA S V+ CF V+ G E + F+ +
Sbjct: 148 LEVFVEMVSFGLDANEFTLSSAVKAC-----SELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
L Y E AR+VFD MPE D + W +++ +S+ YEE L+ M +V
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
PDG T +V+ ACG + L G E+HG + +GI ++ + ++++ MY KCGS
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS------- 315
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
V +AR VF GM +W+AL+ G QN E AI
Sbjct: 316 ------------------------VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
++ REM+ L L + L + +R GKE+H +RR N+ V +A+ID Y
Sbjct: 352 EIFREMEEKDLYCFGTVLKACAGL----AAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
K G I A +V+ + R+++ W A+++A A +G A+ + M+ GI+PD ++
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
A+LTAC H+G+VDE F M YGI+P E Y+CM+ +L RAG EA +
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 432 EPSAKAWGALLNGASVYGDV-ETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASR 490
A WG LL + D + + E+EP+ +Y++++N+Y GR +A
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 491 VRKRMEEIGVHKIRGSSWIE 510
+RK M GV K G SWI+
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 226/512 (44%), Gaps = 86/512 (16%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE-IGLA 86
P + + + L + FS+ + + H V++ GLETD V N+L++ Y + G +
Sbjct: 58 PATPKLYASLLQTCNKVFSFIHGI-QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
R+VFDG +D +SW SM+ GY + + +++EM+S G + + T+ S ++AC +
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLSSAVKACSE 175
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
++ LG HG V G E + + + + +Y AR +F+EM E D +
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVI----- 230
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM-QGSGLKPN 265
W A++S +N+ +E A+ L M +G GL P+
Sbjct: 231 --------------------------CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 264
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
T + + L+ GKE+H I N+ V ++++D Y K G + ARQVF+
Sbjct: 265 GSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN 324
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA------- 378
++ V W+A++ Y +G+ A+ ++ +M + D VL ACA
Sbjct: 325 GMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRL 380
Query: 379 ----------------------------HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
SG +D A +++ SK I+ ++ + M+
Sbjct: 381 GKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY----SKMSIRNMI-TWNAML 435
Query: 411 GVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGK---FACDHLFEI 464
L++ G+ EA F ++M I+P ++ A+L G V+ G+ + I
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRME 496
+P + +Y M +L AG +EEA + +R E
Sbjct: 496 KPGTE-HYSCMIDLLGRAGLFEEAENLLERAE 526
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 49/356 (13%)
Query: 1 MLIAYSFNGLYRHLLDLF-ASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
+L A+S N LY L LF A G+ PD T +VL A + K KE H ++
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN--LRRLKQGKEIHGKLI 292
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G+ +++ VE++L+ Y +CG + AR+VF+GM ++++VSW++++GGY Q G +E+
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ EM D +V++AC + LG E+HG G ++ + +A+I +Y
Sbjct: 353 IFREMEE-----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
K G +D A ++ +MS ++ + TWNA++S
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMI-------------------------------TWNAMLS 436
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE-----VHAYAIR 294
+ QN E A+ +M G+KP+ ++ + + + + G+ +Y I+
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK 496
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIWTAIITAYAAHGDAS 349
+ + +ID + G A + ++A R+ +W ++ AA+ DAS
Sbjct: 497 PGTEH----YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADAS 548
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
AI ++ S + AS + + + G + HA+ ++ + + V +++
Sbjct: 45 AIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 310 TYAKLG-FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
Y KLG + R+VFD + + WT++++ Y + AL ++ +M+ G+ ++
Sbjct: 105 LYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF 164
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ---PLVEQYACMVGVLSRAGKLSEAAKF 425
TL++ + AC+ G V + F+ + +G + + A + GV +A +
Sbjct: 165 TLSSAVKACSELGEV-RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREP---VDARRV 220
Query: 426 ISEMPIEPSAKAWGALLNGAS 446
EMP EP W A+L+ S
Sbjct: 221 FDEMP-EPDVICWTAVLSAFS 240
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 239/458 (52%), Gaps = 33/458 (7%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H ++ GL+ D +V +LV Y + G + A+KVFD +P R++V W ++ GY +
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD 191
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGF-VNESGIEVDLPLCN 173
E RL+ M G + D +T++ +++ACG +G VHG + S I+ L
Sbjct: 192 PEVFRLFCLMRDTG-LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT 233
++I MY KC LD AR+LFE +++ V
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVV-------------------------------M 279
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
W LISG + A DL R+M + PN TLA+ + S +LR GK VH Y I
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALG 353
R + + T+ ID YA+ G I AR VFD R+++ W+++I A+ +G AL
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL 413
+ +M + P+ VT ++L+AC+HSG V E WK F +M YG+ P E YACMV +L
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Query: 414 SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYI 473
RAG++ EA FI MP++P A AWGALL+ ++ +V+ + L +EPE S Y+
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYV 519
Query: 474 IMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
+++N+Y+ AG WE + VR++M G K G S E+
Sbjct: 520 LLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 207/436 (47%), Gaps = 40/436 (9%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP--ERDTVSWNSMIGGYS 109
++ H V+ G E ++ + ++L Y + + A F+ +P +R+ SWN+++ GYS
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 110 QCGF--YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
+ Y + LY M V D +V ++AC L G+ +HG ++G++
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGV-DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDK 142
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
D + +++ MYA+ G+++ A+++F+E+ ++ V +G ++ GY+ Y K +VFR
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS---KDPEVFR--- 196
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
L M+ +GL +A+TL + + GK
Sbjct: 197 -------------------------LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKC 231
Query: 288 VHAYAIRRCY-DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
VH +IRR + DQ+ Y+ +IID Y K + AR++F+ + R++V+WT +I+ +A
Sbjct: 232 VHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE 291
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQY 406
A A L+ QML I P+Q TL A+L +C+ G + + M + GI+ +
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNF 350
Query: 407 ACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEP 466
+ + +R G + A MP E + +W +++N + G E C H + +
Sbjct: 351 TSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFEEA-LDCFHKMKSQN 408
Query: 467 ESSGNYIIMANLYSCA 482
+ ++ L +C+
Sbjct: 409 VVPNSVTFVSLLSACS 424
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
DLF + I P+ T+ ++L ++ S + K H +++R G+E D + +
Sbjct: 297 FDLFRQMLRESILPNQCTLAAIL--VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y RCG I +AR VFD MPER+ +SW+SMI + G +EE + +M S +VVP+
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS-QNVVPNS 413
Query: 135 VTIVSVMQACGQSKDLVLG-MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
VT VS++ AC S ++ G + + G+ + ++ + + G + A+ +
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
Query: 194 EMSEKDDVS-YGSIISG 209
M K S +G+++S
Sbjct: 474 NMPVKPMASAWGALLSA 490
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 164/393 (41%), Gaps = 59/393 (15%)
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS-- 196
+++ Q+K L +VH V G E ++ L +++ Y + LD+A F +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 197 EKDDVSYGSIISGY-----MAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
+++ S+ +I+SGY Y V+ + R G+D++N + +
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMR-RHCDGVDSFNLVFA------------ 115
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
++ G GL N + +H A++ D++ YVA ++++ Y
Sbjct: 116 --IKACVGLGLLENGIL-------------------IHGLAMKNGLDKDDYVAPSLVEMY 154
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
A+LG + A++VFD+ R+ V+W ++ Y + L+ M D+G+ D +TL
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ----YACMVGVLSRAGKLSEAAKFIS 427
++ AC + A K+ +H + ++Q A ++ + + L A K
Sbjct: 215 CLVKACGNVF----AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF- 269
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPES--SGNYIIMANLYSCA--G 483
E ++ + W L++G + E A D ++ ES + A L SC+ G
Sbjct: 270 ETSVDRNVVMWTTLISG---FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 484 RWEEASRVRKRMEEIGVH--KIRGSSWIEMSGR 514
V M G+ + +S+I+M R
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYAR 359
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 278/547 (50%), Gaps = 35/547 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAG-ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ + NG ++ F V A ++PD T+ +++ A S S + + H FV+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS--RLGRCVHGFVI 190
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
RRG D+ + N+L+ CY + A +F + E+D +SW+++I Y Q G E
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
++ +M+ G+ P+ T++ V+QAC + DL G + H G+E ++ + A++ MY
Sbjct: 251 VFNDMMDDGTE-PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KC S + A +F + KD VS+ ++ISG+ G ++ + F M
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM------------- 356
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
+++NN +P+A+ + + S L K H+Y I+ +D
Sbjct: 357 -LLENN----------------TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
N ++ ++++ Y++ G + A +VF+ + V+WT++IT Y HG + AL + M+
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 360 DSG-IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
S ++P++VT ++L+AC+H+GL+ E +IF M + Y + P +E YA +V +L R G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 419 LSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
L A + MP P+ + G LL ++ + E + LFE+E +G Y++M+N+
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNV 579
Query: 479 YSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
Y G WE ++R +++ G+ K S IE+ ++ F+A D + + +Y L+ L
Sbjct: 580 YGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Query: 539 FCMMREE 545
M+E+
Sbjct: 640 DLHMKED 646
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 226/472 (47%), Gaps = 39/472 (8%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRR-GLETDIFVENALVTCYCRCGEIGLA 86
PD+FT+ LKA Y + H FV + L +D++V ++L+ Y +CG + A
Sbjct: 58 PDNFTLPVALKACGELREVNYGEM--IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA 115
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
++FD + + D V+W+SM+ G+ + G + + M+ V PD VT+++++ AC +
Sbjct: 116 LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
+ LG VHGFV G DL L N+++ YAK + A LF+ ++EKD +S+ ++
Sbjct: 176 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
I+ Y+ G +A VF +M G +PN
Sbjct: 236 IACYVQNGAAAEALLVF-------------------------------NDMMDDGTEPNV 264
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
T+ + + +L G++ H AIR+ + + V+TA++D Y K A VF +
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQM-LDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ +V W A+I+ + +G A ++ ++ M L++ +PD + + VL +C+ G +++
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
A K F++ KYG A +V + SR G L A+K + + ++ + W +L+ G
Sbjct: 385 A-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV-VWTSLITGY 442
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSC--AGRWEEASRVRKRM 495
++G +H+ + ++ L +C AG E R+ K M
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 176/365 (48%), Gaps = 34/365 (9%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
AR++F M +R WN+++ S+ +EE + M PD T+ ++ACG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACG 71
Query: 146 QSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
+ +++ G +HGFV + + DL + +++I MY KCG + A +F+E+ + D V++
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
S++SG+ G +A + FR M + S + P
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRM------------------------------VMASDVTP 161
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
+ VTL + + + SN R G+ VH + IRR + ++ + ++++ YAK A +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
+ ++ W+ +I Y +G A+ AL ++ M+D G +P+ T+ VL ACA + ++
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 385 EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ K + + + G++ V+ +V + + EA S +P +W AL++G
Sbjct: 282 QGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISG 339
Query: 445 ASVYG 449
++ G
Sbjct: 340 FTLNG 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 217 VKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
V AR +F M L WN L+ + + +E + M KP+ TL +
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 277 SYFSNLRGGKEVHAYAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
+ G+ +H + + ++YV +++I Y K G + A ++FD+ +V W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 336 TAIITAYAAHGDASLALGLYAQM-LDSGIQPDQVTLTAVLTACA 378
+++++ + +G A+ + +M + S + PD+VTL +++AC
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 282/539 (52%), Gaps = 47/539 (8%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
+F + G+ D + TSV+ + K ++ H ++RG E+ + V N L++
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHET--DLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y +CG + + VF M ER+ VSW +MI ++ +++ M G V P+ VT
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDG-VYPNEVT 374
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
V ++ A ++ + G+++HG ++G + + N+ I +YAK +L+ A++ FE
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE--- 431
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
D+++ IIS WNA+ISG QN + A+ +
Sbjct: 432 ---DITFREIIS-------------------------WNAMISGFAQNGFSHEALKMFLS 463
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNL--RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
+ PN T S + ++ ++ + G+ HA+ ++ + V++A++D YAK
Sbjct: 464 AAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKR 522
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
G I + +VF++ ++ +WT+II+AY++HGD + L+ +M+ + PD VT +VL
Sbjct: 523 GNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
TAC G+VD+ ++IFN M Y ++P E Y+CMV +L RAG+L EA + +SE+P P
Sbjct: 583 TACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG 642
Query: 435 AKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKR 494
++L ++G+V+ G + E++PE SG+Y+ M N+Y+ W++A+ +RK
Sbjct: 643 ESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKA 702
Query: 495 MEEIGVHKIRGSSWIEM-----SGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
M + V K G SWI++ S + F + D S+ +SDEIY +E + M EG +
Sbjct: 703 MRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 164/338 (48%), Gaps = 41/338 (12%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ H F G + + V NA++ Y + G A +F+ + + D VSWN+++ G+
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD-- 154
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+ + M S G VV D T + + C S+ +LG+++ V ++G+E DL +
Sbjct: 155 -NQIALNFVVRMKSAG-VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVG 212
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYG-FVVKARDVFRGMENPGL 231
N+ I MY++ GS AR +F+EMS KD +S+ S++SG G F +A +FR
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR------- 265
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
D++RE G++ + V+ S I + ++L+ +++H
Sbjct: 266 --------------------DMMRE----GVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
I+R Y+ + V ++ Y+K G + + VF Q R++V WT +I++ + A
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDA 356
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKI 389
+ ++ M G+ P++VT ++ A + + E KI
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 165/363 (45%), Gaps = 42/363 (11%)
Query: 85 LARKVFDGMPERD-TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP--DGVTIVSVM 141
+A K+FDG +R+ T S N I + ++ E L +G D VT+ +
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 142 QACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV 201
+AC DL G ++HGF SG + + NAV+ MY K G D A +FE + + D V
Sbjct: 86 KAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
S+ +I+SG+ +N A++ V M+ +G
Sbjct: 144 SWNTILSGF--------------------------------DDNQI--ALNFVVRMKSAG 169
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR 321
+ +A T ++ + G ++ + ++ + ++ V + I Y++ G GAR
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 322 QVFDQARSRSLVIWTAIITAYAAHGDASL-ALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+VFD+ + ++ W ++++ + G A+ ++ M+ G++ D V+ T+V+T C H
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
+ A +I + + K G + L+E ++ S+ G L EA K + E + +W
Sbjct: 290 TDLKLARQI-HGLCIKRGYESLLEVGNILMSRYSKCGVL-EAVKSVFHQMSERNVVSWTT 347
Query: 441 LLN 443
+++
Sbjct: 348 MIS 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ ++ NG L +F S+ A P+ +T SVL AIA K + H +L+
Sbjct: 444 MISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL + V +AL+ Y + G I + KVF+ M +++ W S+I YS G +E L
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ +M+ +V PD VT +SV+ AC + + G E+ + E +E + ++ M
Sbjct: 563 FHKMIK-ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDML 621
Query: 180 AKCGSLDYARELFEEM 195
+ G L A EL E+
Sbjct: 622 GRAGRLKEAEELMSEV 637
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
+L+ G ++H ++ + + V+ A++ Y K G A +F+ +V W I++
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
+ D +AL +M +G+ D T + L+ C S ++ +T+ K G++
Sbjct: 151 GF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV-VKTGLE 206
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+ + + SR+G A + EM + +W +LL+G S G
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI-SWNSLLSGLSQEG 254
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 266/502 (52%), Gaps = 7/502 (1%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K H +++ G+ + N LV Y +CG A +VFD MP RD ++W S++ +Q
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQA 82
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
+ ++ + S + PD ++++AC + G +VH S D +
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
++++ MYAKCG L+ A+ +F+ + K+ +S+ +++SGY G +A ++FR + L
Sbjct: 143 KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL 202
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKP-NAVTLASTIPLFSYFSNLRGGKEVHA 290
+W ALISG VQ+ A + EM+ + + + L+S + + + G++VH
Sbjct: 203 YSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG 262
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
I +D ++++ A+ID YAK + A+ +F + R R +V WT++I A HG A
Sbjct: 263 LVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK 322
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
AL LY M+ G++P++VT ++ AC+H G V++ ++F +M YGI+P ++ Y C++
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL---FEIEPE 467
+L R+G L EA I MP P W ALL+ G + G DHL F+++
Sbjct: 383 DLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP 442
Query: 468 SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNER 527
S+ YI+++N+Y+ A W + S R+++ E+ V K G S +E+ F A + S+
Sbjct: 443 ST--YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPL 500
Query: 528 SDEIYTYLEGLFCMMR-EEGYI 548
++I+ L+ L MR GY+
Sbjct: 501 KEDIFRLLKKLEEEMRIRNGYV 522
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
+Q C +++ L +H + + GI PL N ++ +Y KCG+ +A ++F+EM +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
+++ S+++ L+ N +SG + S
Sbjct: 70 IAWASVLT---------------------ALNQAN--LSG-------KTLSVFSSVGSSS 99
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
GL+P+ ++ + + ++ G++VH + I Y + V ++++D YAK G ++ A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+ VFD R ++ + WTA+++ YA G AL L+ + + + TA+++ S
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQS 215
Query: 381 GLVDEAWKIFNTMHSKYG--IQPLV 403
G EA+ +F M + + PLV
Sbjct: 216 GKGLEAFSVFTEMRRERVDILDPLV 240
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 273/506 (53%), Gaps = 18/506 (3%)
Query: 11 YRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLETDIFV 69
++ +D++ ++GI P S VTSVL+A + KP+ H L+ GL ++V
Sbjct: 85 FKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI---HAQALKNGLCGCVYV 141
Query: 70 ENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
+ LV Y R G I LA+K FD + E++TVSWNS++ GY + G +E +R++ ++
Sbjct: 142 QTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE--- 198
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC-NAVIAMYAKCGSLDYA 188
D V+ ++ + + D+ G F S + + P N +I Y C + A
Sbjct: 199 --KDAVSWNLIISSYAKKGDM--GNACSLF---SAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
R F+ M +K+ VS+ ++ISGY G V A ++FR M ++A+I+ QN +
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPK 311
Query: 249 GAIDLVREM--QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
A+ L +M + S ++P+ +TL+S + S N G V +Y + ++T+
Sbjct: 312 DALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTS 371
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
+ID Y K G A ++F + V ++A+I +G A+ A L+ M++ I P+
Sbjct: 372 LIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPN 431
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI 426
VT T +L+A +HSGLV E +K FN+M + ++P + Y MV +L RAG+L EA + I
Sbjct: 432 VVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELI 490
Query: 427 SEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
MP++P+A WGALL + ++ +VE G+ AC H ++E + +G +A +YS GRW+
Sbjct: 491 KSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWD 550
Query: 487 EASRVRKRMEEIGVHKIRGSSWIEMS 512
+A VR ++E + K G SW+E S
Sbjct: 551 DARTVRDSIKEKKLCKTLGCSWVEGS 576
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 131/285 (45%), Gaps = 15/285 (5%)
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
V + + +G +W L+ + Q+ F+ +D+ +M SG+ P++ + S +
Sbjct: 52 NIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVL 111
Query: 274 PLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV 333
N+ GK +HA A++ +YV T ++ Y++LG+I A++ FD ++ V
Sbjct: 112 RACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTV 171
Query: 334 IWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM 393
W +++ Y G+ A ++ D + D V+ ++++ A G + A +F+ M
Sbjct: 172 SWNSLLHGYLESGELDEA----RRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 394 HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVET 453
K P + ++G ++ A + MP + + +W +++G + GDV++
Sbjct: 228 PLK---SP--ASWNILIGGYVNCREMKLARTYFDAMP-QKNGVSWITMISGYTKLGDVQS 281
Query: 454 GKFACDHLFEIEPESSG-NYIIMANLYSCAGRWEEASRVRKRMEE 497
+ LF + + Y M Y+ G+ ++A ++ +M E
Sbjct: 282 A----EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLE 322
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 282/550 (51%), Gaps = 39/550 (7%)
Query: 2 LIAYSF-NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
LIAY + + ++++ + + PD +T++SV KA + S K + +H +
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE--KEAQRSHGLAVI 193
Query: 61 RGLE-TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
GLE +++FV +ALV Y + G+ A+ V D + E+D V ++I GYSQ G E +
Sbjct: 194 LGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVK 253
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ ML V V P+ T SV+ +CG KD+ G +HG + +SG E L +++ MY
Sbjct: 254 AFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
+C +D + VF+ +E P +W +LIS
Sbjct: 313 LRCSLVD-------------------------------DSLRVFKCIEYPNQVSWTSLIS 341
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G+VQN E A+ R+M +KPN+ TL+S + S + G+++H + +D+
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ Y + +ID Y K G AR VFD ++ +I +YA +G AL L+ +M+
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+ G+QP+ VT+ +VL AC +S LV+E ++F++ K I + YACMV +L RAG+L
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRL 520
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA +E+ I P W LL+ V+ VE + + EIEP G I+M+NLY
Sbjct: 521 EEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDV-SNERSDEIYTYLEGL 538
+ G+W ++ +M+++ + K SW+E++ F+A D+ S+ S++I LE L
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Query: 539 FCMMREEGYI 548
++ GY+
Sbjct: 640 IKKSKDLGYV 649
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 173/398 (43%), Gaps = 43/398 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+++ YS G + F S + + P+ +T SVL I+ + K H +++
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL--ISCGNLKDIGNGKLIHGLMVK 295
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G E+ + + +L+T Y RC + + +VF + + VSW S+I G Q G EE +
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG-REEMALI 354
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ S+ P+ T+ S ++ C G ++HG V + G + D + +I +Y
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYG 414
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG D AR +F+ +SE D +S ++I Y GF +A D+F M N
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL----------- 463
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV-HAYAIRRCYDQ 299
GL+PN VT+ S + + + G E+ ++ +
Sbjct: 464 --------------------GLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLT 503
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
N + A ++D + G + A + + + LV+W +++A H +A + ++L
Sbjct: 504 NDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
Query: 360 DSGIQP-DQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
+ I+P D+ TL + A +G W M SK
Sbjct: 563 E--IEPGDEGTLILMSNLYASTG----KWNRVIEMKSK 594
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 154/322 (47%), Gaps = 12/322 (3%)
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
++S ++ + G + AR VF GM + TWN+LI+ ++++ + A+++ R M
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-QNIYVATAIIDTYAKLGFIH 318
+ + P+ TL+S FS S + + H A+ + N++V +A++D Y K G
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 319 GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
A+ V D+ + +V+ TA+I Y+ G+ + A+ + ML +QP++ T +VL +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 379 HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
+ + K+ + + K G + + ++ + R + ++ + + P+ +W
Sbjct: 279 NLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSW 336
Query: 439 GALLNGASVYGDVETGKFACDHLFE--IEPESSGNYIIMANLYSCAG--RWEEASRVRKR 494
+L++G G E + I+P S + + + L C+ +EE ++
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNS---FTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 495 MEEIGVHKIR--GSSWIEMSGR 514
+ + G + + GS I++ G+
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGK 415
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 35/210 (16%)
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
++ G K + A+ ++ + I + ++D K G I ARQVFD R +V W ++I
Sbjct: 80 SISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA 138
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH--------------------- 379
H + A+ +Y M+ + + PD+ TL++V A +
Sbjct: 139 YLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV 198
Query: 380 ------SGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL----SRAGKLSEAAKFISEM 429
S LVD K T +K + + E+ ++ L S+ G+ +EA K M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 430 PIE---PSAKAWGALLNGASVYGDVETGKF 456
+E P+ + ++L D+ GK
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKL 288
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/573 (28%), Positives = 284/573 (49%), Gaps = 45/573 (7%)
Query: 12 RHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVEN 71
HL D AS ++P + + ++K ++P K ++ A +++ L D + N
Sbjct: 760 HHLRDFSAS---LSLAPPN--LKKIIKQCSTP-----KLLESALAAMIKTSLNQDCRLMN 809
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
+T + LA M E + +N++ G+ C LY+ ML SV
Sbjct: 810 QFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSVS 868
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P T S+++A + ++ H + + G + + +I Y+ G + AR++
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 192 FEEMSEKDDVSYGSIIS-------------------------------GYMAYGFVVKAR 220
F+EM E+DD+++ +++S GYM G + +A
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 221 DVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
+F M + +W +I G QN + AI + +M G+ P+ VT+++ I ++
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
L GKEVH Y ++ + ++Y+ +A++D Y+K G + A VF ++L W +II
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
AAHG A AL ++A+M ++P+ VT +V TAC H+GLVDE +I+ +M Y I
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDH 460
VE Y MV + S+AG + EA + I M EP+A WGALL+G ++ ++ + A +
Sbjct: 1167 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 1226
Query: 461 LFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKI-RGSSWIEMSGRLIAFI 519
L +EP +SG Y ++ ++Y+ RW + + +R RM E+G+ KI G+S I + R F
Sbjct: 1227 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFA 1286
Query: 520 AKDVSNERSDEIYTYLEGLFCMMREEGYILQEE 552
A D S+ SDE+ L+ ++ M GY+ + E
Sbjct: 1287 AADKSHSASDEVCLLLDEIYDQMGLAGYVQETE 1319
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 5/228 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS N YR + +F ++ GI PD T+++V+ A A + KE H + L+
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH--LGVLEIGKEVHMYTLQ 1060
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D+++ +ALV Y +CG + A VF +P+++ WNS+I G + GF +E ++
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKM 1120
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVH-GFVNESGIEVDLPLCNAVIAMY 179
+ +M + SV P+ VT VSV AC + + G ++ +++ I ++ ++ ++
Sbjct: 1121 FAKM-EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1179
Query: 180 AKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
+K G + A EL M E + V +G+++ G + +V A F +
Sbjct: 1180 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 252/498 (50%), Gaps = 35/498 (7%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H L+ G +D F N LV Y + EI ARK+FD M E + VSW S+I GY+ G
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+ ++ +M V P+ T SV +AC + +G +H + SG+ ++ + ++
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
++ MY KC ++ AR +F+ M + YG R+V +W
Sbjct: 172 LVDMYGKCNDVETARRVFDSM-----IGYG---------------RNVV---------SW 202
Query: 235 NALISGMVQNNWFEGAIDLVREMQG--SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
++I+ QN AI+L R + + N LAS I S L+ GK H
Sbjct: 203 TSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLV 262
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
R Y+ N VAT+++D YAK G + A ++F + R S++ +T++I A A HG A+
Sbjct: 263 TRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAV 322
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
L+ +M+ I P+ VTL VL AC+HSGLV+E + + M KYG+ P Y C+V +
Sbjct: 323 KLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDM 382
Query: 413 LSRAGKLSEA---AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
L R G++ EA AK I E+ E A WGALL+ ++G VE A L + + +
Sbjct: 383 LGRFGRVDEAYELAKTI-EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSD 529
YI ++N Y+ +G WE++ +R M+ G K R SWIE + F A D+S + S
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESG 501
Query: 530 EIYTYLEGLFCMMREEGY 547
EI +L+ L M+E G+
Sbjct: 502 EIERFLKDLEKRMKERGH 519
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 164/395 (41%), Gaps = 49/395 (12%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
D + P+ +T SV KA ++ + S + K H + GL +I V ++LV Y +C +
Sbjct: 124 DRPVPPNEYTFASVFKACSALAES--RIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 83 IGLARKVFDGMP--ERDTVSWNSMIGGYSQCGFYEECKRLYMEM-LSVGSVVPDGVTIVS 139
+ AR+VFD M R+ VSW SMI Y+Q E L+ ++ S + + S
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKD 199
V+ AC L G HG V G E + + +++ MYAKCGSL A ++F +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
+SY S+I +G E A+ L EM
Sbjct: 302 VISYTSMIMAKAKHGL-------------------------------GEAAVKLFDEMVA 330
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR---CYDQNIYVATAIIDTYAKLGF 316
+ PN VTL + S+ + G E + + D Y T ++D + G
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY--TCVVDMLGRFGR 388
Query: 317 IHGARQV---FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
+ A ++ + + ++W A+++A HG + +++ S Q +T+
Sbjct: 389 VDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ-----VTSA 443
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A +++ V W+ ++ + V++ AC
Sbjct: 444 YIALSNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 39/276 (14%)
Query: 156 VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGF 215
+H + G D N ++ Y K ++ AR+LF+EM E + VS+ S+ISGY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 216 VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
A +F+ M + + PN T AS
Sbjct: 111 PQNALSMFQKMH------------------------------EDRPVPPNEYTFASVFKA 140
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ--ARSRSLV 333
S + R GK +HA +NI V+++++D Y K + AR+VFD R++V
Sbjct: 141 CSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVV 200
Query: 334 IWTAIITAYAAHGDASLALGLYAQMLDSGIQPD---QVTLTAVLTACAHSGLVDEAW-KI 389
WT++ITAYA + A+ L+ + ++ + D Q L +V++AC+ G + W K+
Sbjct: 201 SWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQ--WGKV 257
Query: 390 FNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
+ + ++ G + ++ + ++ G LS A K
Sbjct: 258 AHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPD---SFTVTSVLKAIASPSFSYYKPVKEAHCF 57
M+ AY+ N ++LF S +A ++ D F + SV+ A +S + V AH
Sbjct: 205 MITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWGKV--AHGL 261
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
V R G E++ V +L+ Y +CG + A K+F + +S+ SMI ++ G E
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVI 176
+L+ EM++ G + P+ VT++ V+ AC S + G+E + E G+ D V+
Sbjct: 322 VKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
Query: 177 AMYAKCGSLDYAREL---FEEMSEKDDVSYGSIISGYMAYGFV 216
M + G +D A EL E +E+ + +G+++S +G V
Sbjct: 381 DMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRV 423
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 270/531 (50%), Gaps = 33/531 (6%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASP-SFSYYKPVKEAHCFVLRRG 62
+Y N ++ + ++ + GI D FT SV+KA A+ F+Y + V H +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV---HGSIEVSS 214
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
+++V NAL++ Y R G++ +AR++FD M ERD VSWN++I Y+ E +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL-L 273
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA-- 180
+ + + V VT ++ C +E ++ V + CN I A
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGC---------LEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 181 -------KCGSLDYARELFE-------EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
G+L + + +F S D S+I+ Y + A VF+ +
Sbjct: 325 NGLKACSHIGALKWGK-VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
E L TWN++ISG N E L++EM SG PN +TLAS +PLF+ NL+ GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 287 EVHAYAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
E H Y +RR Y + + +++D YAK G I A++VFD R R V +T++I Y
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
G +AL + M SGI+PD VT+ AVL+AC+HS LV E +F M +GI+ +E
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 406 YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDH-LFEI 464
Y+CMV + RAG L +A +P EPS+ LL ++G+ G++A D L E
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRL 515
+PE G+Y+++A++Y+ G W + V+ + ++GV K + +E L
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 203/420 (48%), Gaps = 13/420 (3%)
Query: 45 FSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSM 104
F+ + P ++ H + GLE D + LVT Y + A+ + + + WN +
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVL 155
Query: 105 IGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG 164
IG Y + ++E +Y M+S G + D T SV++AC D G VHG + S
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 165 IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY-----MAYGFVVKA 219
+L +CNA+I+MY + G +D AR LF+ MSE+D VS+ +II+ Y + F +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
R G+E + TWN + G ++ + GA++ V M+ ++ +V + + + S+
Sbjct: 275 RMYLSGVE-ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 280 SNLRGGKEVHAYAIRRC-YDQNI-YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTA 337
L+ GK H IR C + +I V ++I Y++ + A VF Q + SL W +
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY 397
II+ +A + + L +ML SG P+ +TL ++L A G + + + +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFA 457
+ + + +V + +++G++ A + M + + +L++G YG + G+ A
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGEVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 270/531 (50%), Gaps = 33/531 (6%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASP-SFSYYKPVKEAHCFVLRRG 62
+Y N ++ + ++ + GI D FT SV+KA A+ F+Y + V H +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV---HGSIEVSS 214
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
+++V NAL++ Y R G++ +AR++FD M ERD VSWN++I Y+ E +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL-L 273
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA-- 180
+ + + V VT ++ C +E ++ V + CN I A
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGC---------LEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 181 -------KCGSLDYARELFE-------EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
G+L + + +F S D S+I+ Y + A VF+ +
Sbjct: 325 NGLKACSHIGALKWGK-VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
E L TWN++ISG N E L++EM SG PN +TLAS +PLF+ NL+ GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 287 EVHAYAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
E H Y +RR Y + + +++D YAK G I A++VFD R R V +T++I Y
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
G +AL + M SGI+PD VT+ AVL+AC+HS LV E +F M +GI+ +E
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 406 YACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDH-LFEI 464
Y+CMV + RAG L +A +P EPS+ LL ++G+ G++A D L E
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRL 515
+PE G+Y+++A++Y+ G W + V+ + ++GV K + +E L
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 203/420 (48%), Gaps = 13/420 (3%)
Query: 45 FSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSM 104
F+ + P ++ H + GLE D + LVT Y + A+ + + + WN +
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVL 155
Query: 105 IGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG 164
IG Y + ++E +Y M+S G + D T SV++AC D G VHG + S
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 165 IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY-----MAYGFVVKA 219
+L +CNA+I+MY + G +D AR LF+ MSE+D VS+ +II+ Y + F +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
R G+E + TWN + G ++ + GA++ V M+ ++ +V + + + S+
Sbjct: 275 RMYLSGVE-ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 280 SNLRGGKEVHAYAIRRC-YDQNI-YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTA 337
L+ GK H IR C + +I V ++I Y++ + A VF Q + SL W +
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY 397
II+ +A + + L +ML SG P+ +TL ++L A G + + + +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFA 457
+ + + +V + +++G++ A + M + + +L++G YG + G+ A
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGRLGKGEVA 509
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 229/412 (55%), Gaps = 2/412 (0%)
Query: 99 VSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG 158
+S + Y+ G +E+ L+++M S ++ D +++C + VLG VH
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 159 FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVK 218
+S + + A++ MY KC S+ +AR+LF+E+ +++ V + ++IS Y G V +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 219 ARDVFRGME-NPGLDTWNALISGMV-QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
A +++ M+ P ++NA+I G+V + AI+ R+M KPN +TL + +
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWT 336
S R KE+H+YA R + + + + +++ Y + G I + VFD R +V W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 337 AIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
++I+AYA HGDA AL + +M + + PD + VL AC+H+GL DEA F M
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKF 456
YG++ + Y+C+V VLSR G+ EA K I MP +P+AK WGALL YG++E +
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 457 ACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
A L +EPE+ NY+++ +Y GR EEA R+R +M+E GV GSSW
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 167/386 (43%), Gaps = 70/386 (18%)
Query: 2 LIAYSFNGLYRHLLDLFASSVDAGISP-DSFTVTSVLKAIASPSFSYYKPV--KEAHCFV 58
L +Y+ G + L+LF + P D+ + LK+ A+ ++PV H
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAA----FRPVLGGSVHAHS 74
Query: 59 LRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECK 118
++ ++ FV AL+ Y +C + ARK+FD +P+R+ V WN+MI Y+ CG +E
Sbjct: 75 VKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAV 134
Query: 119 RLYMEM------LSVGSVV--------------------------PDGVTIVSVMQACGQ 146
LY M S +++ P+ +T+++++ AC
Sbjct: 135 ELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSA 194
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
L E+H + + IE L + ++ Y +CGS+ Y + +F+ M ++D V++ S+
Sbjct: 195 IGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSL 254
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
IS Y +G A F+ ME ++ + ++ +++++ +GL A
Sbjct: 255 ISAYALHGDAESALKTFQEME----------LAKVTPDDI--AFLNVLKACSHAGLADEA 302
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+ YF ++G Y +R D + ++D +++G A +V
Sbjct: 303 LV---------YFKRMQGD-----YGLRASKDHY----SCLVDVLSRVGRFEEAYKVIQA 344
Query: 327 ARSRSLV-IWTAIITAYAAHGDASLA 351
+ W A++ A +G+ LA
Sbjct: 345 MPEKPTAKTWGALLGACRNYGEIELA 370
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 17/233 (7%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
+G YR ++ + ++ P+ T+ +++ A ++ ++ +KE H + R +E
Sbjct: 161 DGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSA--IGAFRLIKEIHSYAFRNLIEPHP 217
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+++ LV Y RCG I + VFD M +RD V+W+S+I Y+ G E + + EM +
Sbjct: 218 QLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM-EL 276
Query: 128 GSVVPDGVTIVSVMQACGQS----KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
V PD + ++V++AC + + LV + G + G+ + ++ + ++ G
Sbjct: 277 AKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVG 333
Query: 184 SLDYARELFEEMSEKDDV-SYGSIISGYMAYGFVVKARDVFRGM-----ENPG 230
+ A ++ + M EK ++G+++ YG + A R + ENP
Sbjct: 334 RFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPA 386
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 266/530 (50%), Gaps = 38/530 (7%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIA-SPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
L+L A G++ ++ + SVLKA + + + + HC+ + G+E DI V AL
Sbjct: 234 LNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTAL 293
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG-----FYEECKRLYMEMLSVG 128
+ Y + G + A K+F MP ++ V++N+MI G+ Q E +L+M+M G
Sbjct: 294 LDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
+ P T V++AC +K L G ++H + ++ + D + +A+I +YA GS +
Sbjct: 354 -LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
+ F S++D + +W ++I VQN E
Sbjct: 413 MQCFASTSKQD-------------------------------IASWTSMIDCHVQNEQLE 441
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
A DL R++ S ++P T++ + + F+ L G+++ YAI+ D V T+ I
Sbjct: 442 SAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSI 501
Query: 309 DTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
YAK G + A QVF + ++ + ++A+I++ A HG A+ AL ++ M GI+P+Q
Sbjct: 502 SMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQ 561
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
VL AC H GLV + K F M + Y I P + + C+V +L R G+LS+A I
Sbjct: 562 AFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILS 621
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
+ W ALL+ VY D GK + L E+EPE+SG+Y+++ N+Y+ +G A
Sbjct: 622 SGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSA 681
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
VR+ M + GV K SWI + + +F D+S+ S IYT LE +
Sbjct: 682 EEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 40/344 (11%)
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
YC+C E+G AR++FD MPER+ +S+NS+I GY+Q GFYE+ L++E ++ D T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEARE-ANLKLDKFT 150
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
+ CG+ DL LG +HG V +G+ + L N +I MY+KCG LD A LF+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
E+D VS+ S+ISGY+ G + ++ M GL +L
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL--------------------NLTTY 250
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
GS LK + L + G +H Y + + +I V TA++D YAK G
Sbjct: 251 ALGSVLKACCINLNEGF--------IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGD-----ASLALGLYAQMLDSGIQPDQVTLT 371
+ A ++F S+++V + A+I+ + + +S A L+ M G++P T +
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 372 AVLTACAHSGLVDEAWKIF-----NTMHSKYGI-QPLVEQYACM 409
VL AC+ + ++ +I N S I L+E YA M
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 236/535 (44%), Gaps = 79/535 (14%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ G Y ++LF + +A + D FT L + H V+
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL--LHGLVVV 176
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL +F+ N L+ Y +CG++ A +FD ERD VSWNS+I GY + G EE L
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 121 YMEMLSVGSVVPDGVTIV-----SVMQACGQSKD---LVLGMEVHGFVNESGIEVDLPLC 172
+M DG+ + SV++AC + + + GM +H + + G+E D+ +
Sbjct: 237 LAKMHR------DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR 290
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
A++ MYAK GSL A +LF M K+ V+Y ++ISG++ +D
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ------------------MD 332
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+ + A L +MQ GL+P+ T + + S L G+++HA
Sbjct: 333 E--------ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+ + + ++ +A+I+ YA +G Q F + + WT++I + + A
Sbjct: 385 CKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAF 444
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACA-----HSGLVDEAWKIFN-------------TMH 394
L+ Q+ S I+P++ T++ +++ACA SG + + I + +M+
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 395 SKYGIQPLVEQ------------YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWG 439
+K G PL Q Y+ M+ L++ G +EA M I+P+ +A+
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 440 ALLNGASVYGDVETG--KFAC-DHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
+L G V G F C + + I P ++ + +L GR +A +
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEK-HFTCLVDLLGRTGRLSDAENL 618
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 36/308 (11%)
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKD 199
+ Q +S +VLG HG + +S + L L N ++ MY KC L +AR+LF+ M E++
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
+S+ S+ISGY GF +E A++L E +
Sbjct: 113 IISFNSLISGYTQMGF-------------------------------YEQAMELFLEARE 141
Query: 260 SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHG 319
+ LK + T A + +L G+ +H + Q +++ +ID Y+K G +
Sbjct: 142 ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ 201
Query: 320 ARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA- 378
A +FD+ R V W ++I+ Y G A L L A+M G+ L +VL AC
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
Query: 379 --HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
+ G +++ I + +K G++ + ++ + ++ G L EA K S MP +
Sbjct: 262 NLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVV 319
Query: 437 AWGALLNG 444
+ A+++G
Sbjct: 320 TYNAMISG 327
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 252/494 (51%), Gaps = 37/494 (7%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
D+F + G+ PD ++ ++ + K H FV+R D V N+L+
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGK--MMLVPQGKAFHGFVIRHCFSLDSTVCNSLL 373
Query: 75 TCYCRCGEIGLARKVFDGMPER-DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
+ YC+ + +A K+F + E + +WN+M+ GY + + +C L+ ++ ++G + D
Sbjct: 374 SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG-IEID 432
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
+ SV+ +C ++LG +H +V ++ +++ + + N++I +Y K G L A +F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 492
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
E + + TWNA+I+ V E AI L
Sbjct: 493 E--------------------------------ADTNVITWNAMIASYVHCEQSEKAIAL 520
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAK 313
M KP+++TL + + +L G+ +H Y ++ N+ ++ A+ID YAK
Sbjct: 521 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 580
Query: 314 LGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G + +R++FD + V W +I+ Y HGD A+ L+ QM +S ++P T A+
Sbjct: 581 CGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLAL 640
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEP 433
L+AC H+GLV++ K+F MH +Y ++P ++ Y+C+V +LSR+G L EA + MP P
Sbjct: 641 LSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSP 699
Query: 434 SAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRK 493
WG LL+ +G+ E G + +P++ G YI++AN+YS AG+WEEA R R+
Sbjct: 700 DGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERARE 759
Query: 494 RMEEIGVHKIRGSS 507
M E GV K G S
Sbjct: 760 MMRESGVGKRAGHS 773
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 148/291 (50%), Gaps = 18/291 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV---KEAHCF 57
ML Y + ++LF + GI DS + TSV+ S S+ V K HC+
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS-----SCSHIGAVLLGKSLHCY 458
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDT--VSWNSMIGGYSQCGFYE 115
V++ L+ I V N+L+ Y + G++ +A ++F E DT ++WN+MI Y C E
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF---CEADTNVITWNAMIASYVHCEQSE 515
Query: 116 ECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAV 175
+ L+ M+S + P +T+V+++ AC + L G +H ++ E+ E++L L A+
Sbjct: 516 KAIALFDRMVS-ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 176 IAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGL 231
I MYAKCG L+ +RELF+ ++KD V + +ISGY +G V A +F ME P
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
T+ AL+S E L +M +KPN + + L S NL
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNL 685
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 174/387 (44%), Gaps = 37/387 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ A+ NG Y L F S + +G SPD FT V+ A A ++ H VL+
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE--LLWFHVGTFVHGLVLK 153
Query: 61 RG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G + + V + V Y +CG + A VFD MP+RD V+W ++I G+ Q G E
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 120 LYMEMLSVGSVV--PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
+M S GS V P+ T+ QAC L G +HGF ++G+ + +++ +
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
Y+K G+ A F E+ ++D + +W ++
Sbjct: 274 FYSKSGNPSEAYLSFRELGDED-------------------------------MFSWTSI 302
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
I+ + ++ E + D+ EMQ G+ P+ V ++ I + GK H + IR C+
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAIITAYAAHGDASLALGLYA 356
+ V +++ Y K + A ++F + + + W ++ Y + L+
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLV 383
++ + GI+ D + T+V+++C+H G V
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAV 449
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 181/419 (43%), Gaps = 41/419 (9%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
+ +++ + ++ GL +IFV + L++ Y G+ L+ +VF + RD WNS+I +
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV-NESGIEV 167
G Y + ML G PD T V+ AC + +G VHG V G +
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQ-SPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
+ + + + Y+KCG L A +F+EM ++D V++ +IISG+
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH----------------- 202
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL---KPNAVTLASTIPLFSYFSNLRG 284
VQN EG + + +M +G KPN TL S L+
Sbjct: 203 --------------VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
G+ +H +A++ + +V +++ Y+K G A F + + WT+II + A
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
GD + ++ +M + G+ PD V ++ ++ LV + K F+ ++
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDST 367
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
++ + + LS A K + E + +AW +L G YG ++ C LF
Sbjct: 368 VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG---YGKMKC-HVKCIELFR 422
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
+L ++ +A I +NI+VA+ +I +YA G + + +VF R + +W +II
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
A+ ++GD + +L + ML SG PD T V++ACA + + G
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETG 454
A V S+ G L +A EMP + AW A+++G G+ E G
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESEGG 211
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 245/453 (54%), Gaps = 35/453 (7%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVS---WNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ L+T + C + LARK+FD + + ++ W +M GYS+ G + +Y++ML
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML-C 229
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
+ P +I ++AC KDL +G +H + + +VD + N ++ +Y + G D
Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD 289
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
AR++F+ MSE++ V+ WN+LIS + +
Sbjct: 290 ARKVFDGMSERNVVT-------------------------------WNSLISVLSKKVRV 318
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
+L R+MQ + + TL + +P S + L GKE+HA ++ ++ + ++
Sbjct: 319 HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSL 378
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
+D Y K G + +R+VFD ++ L W ++ YA +G+ + L+ M++SG+ PD
Sbjct: 379 MDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDG 438
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
+T A+L+ C+ +GL + +F M +++ + P +E YAC+V +L RAGK+ EA K I
Sbjct: 439 ITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIE 498
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEE 487
MP +PSA WG+LLN ++G+V G+ A LF +EP + GNY++++N+Y+ A W+
Sbjct: 499 TMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDN 558
Query: 488 ASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIA 520
++R+ M++ GV K G SW+++ ++ F+A
Sbjct: 559 VDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M I YS NG R L ++ + + I P +F+++ LKA + + H +++
Sbjct: 207 MAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD--LKDLRVGRGIHAQIVK 264
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
R + D V N L+ Y G ARKVFDGM ER+ V+WNS+I S+ E L
Sbjct: 265 RKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNL 324
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +M + T+ +++ AC + L+ G E+H + +S + D+PL N+++ MY
Sbjct: 325 FRKMQE-EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNA 236
KCG ++Y+R +F+ M KD S+ +++ Y G + + ++F M G+ T+ A
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 443
Query: 237 LISGMVQNNWFEGAIDLVREMQ 258
L+SG E + L M+
Sbjct: 444 LLSGCSDTGLTEYGLSLFERMK 465
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 245/478 (51%), Gaps = 33/478 (6%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N L+ Y R G++ ARKVFD MP+R +WN+MI G Q F EE L+ EM +G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG-F 87
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD T+ SV + + +G ++HG+ + G+E+DL + +++ MY + G L
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL----- 142
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
G I V R M L WN LI G QN E
Sbjct: 143 -----------QDGEI---------------VIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+ L + M+ SG +PN +T + + S + G+++HA AI+ + V +++I
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD-SGIQPDQVT 369
Y+K G + A + F + V+W+++I+AY HG A+ L+ M + + ++ ++V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
+L AC+HSGL D+ ++F+ M KYG +P ++ Y C+V +L RAG L +A I M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEAS 489
PI+ W LL+ +++ + E + + +I+P S Y+++AN+++ A RW + S
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVS 416
Query: 490 RVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
VRK M + V K G SW E G + F D S +S EIY+YL+ L M+ +GY
Sbjct: 417 EVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 16/314 (5%)
Query: 176 IAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWN 235
++MY+K G A ++ M +K+ +S +I+GY+ G +V AR VF M + L TWN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG---GKEVHAYA 292
A+I+G++Q + E + L REM G G P+ TL S +FS + LR G+++H Y
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS---VFSGSAGLRSVSIGQQIHGYT 117
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
I+ + ++ V +++ Y + G + V R+LV W +I A +G L
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
LY M SG +P+++T VL++C+ + + +I + K G +V + ++ +
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISM 236
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG-- 470
S+ G L +AAK SE E W +++ S YG G A + LF E +
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEV-MWSSMI---SAYGFHGQGDEAIE-LFNTMAEQTNME 291
Query: 471 -NYIIMAN-LYSCA 482
N + N LY+C+
Sbjct: 292 INEVAFLNLLYACS 305
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 169/380 (44%), Gaps = 39/380 (10%)
Query: 2 LIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRR 61
LI + FN L LF G SPD +T+ SV S ++ H + ++
Sbjct: 66 LIQFEFN---EEGLSLFREMHGLGFSPDEYTLGSVFSG--SAGLRSVSIGQQIHGYTIKY 120
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLY 121
GLE D+ V ++L Y R G++ V MP R+ V+WN++I G +Q G E LY
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
+M+ + P+ +T V+V+ +C G ++H + G + + +++I+MY+K
Sbjct: 181 -KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 182 CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGM 241
CG L A + F E ++D+V + S+IS AYG F G + ++ +N +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMIS---AYG--------FHGQGDEAIELFNTMAEQT 288
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
++L+ SGLK + L + V Y + +
Sbjct: 289 NMEINEVAFLNLLYACSHSGLKDKGLELFDMM--------------VEKYG----FKPGL 330
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIWTAIITAYAAHGDASLALGLYAQMLD 360
T ++D + G + A + ++ +VIW +++A H +A +A ++ ++L
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 361 SGIQPDQVTLTAVLTACAHS 380
I P+ + VL A H+
Sbjct: 391 --IDPND-SACYVLLANVHA 407
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+++ + NG +L L+ +G P+ T +VL + + + ++ H ++
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD--LAIRGQGQQIHAEAIK 220
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + + V ++L++ Y +CG +G A K F + D V W+SMI Y G +E L
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMY 179
+ M ++ + V ++++ AC S G+E+ + E G + L V+ +
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL 340
Query: 180 AKCGSLDYARELFEEMSEKDD-VSYGSIISGYMAYGFVVKARDVFR 224
+ G LD A + M K D V + +++S + A+ VF+
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 237/426 (55%), Gaps = 7/426 (1%)
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
V PD T ++ + L LG H + G++ D + +++ MY+ CG L A+
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 190 ELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEG 249
+F++ KD ++ S+++ Y G + AR +F M + +W+ LI+G V ++
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 250 AIDLVREMQ-----GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
A+DL REMQ + ++PN T+++ + L GK VHAY + + +I +
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLV-IWTAIITAYAAHGDASLALGLYAQMLDS-G 362
TA+ID YAK G + A++VF+ S+ V ++A+I A +G L+++M S
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
I P+ VT +L AC H GL++E F M ++GI P ++ Y CMV + R+G + EA
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
FI+ MP+EP WG+LL+G+ + GD++T + A L E++P +SG Y++++N+Y+
Sbjct: 358 ESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKT 417
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMM 542
GRW E +R ME G++K+ G S++E+ G + F+ D S + S+ IY L+ + +
Sbjct: 418 GRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
Query: 543 REEGYI 548
RE GY+
Sbjct: 478 REAGYV 483
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 46/284 (16%)
Query: 3 IAYSFNGLYRH-LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV-KEAHCFVLR 60
I ++ + RH + ++ + +SPD T +L + +P + P+ + H +L
Sbjct: 34 IVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNP---LHLPLGQRTHAQILL 90
Query: 61 RGLETDIFVENALVTCYCRCGEI----------------------------GL---ARKV 89
GL+ D FV +L+ Y CG++ GL ARK+
Sbjct: 91 FGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 90 FDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML----SVGSVVPDGVTIVSVMQACG 145
FD MPER+ +SW+ +I GY CG Y+E L+ EM + V P+ T+ +V+ ACG
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV-SYG 204
+ L G VH ++++ +E+D+ L A+I MYAKCGSL+ A+ +F + K DV +Y
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 205 SIISGYMAYGFVVKARDVFRGME-----NPGLDTWNALISGMVQ 243
++I YG + +F M NP T+ ++ V
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 111/255 (43%), Gaps = 40/255 (15%)
Query: 234 WNALISGMVQN---NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
WN +I +V N I + M+ + P+ T +P F +L G+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG---- 346
+ D++ +V T++++ Y+ G + A++VFD + S+ L W +++ AYA G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 347 --------------------DASLALGLYAQMLD------------SGIQPDQVTLTAVL 374
+ + G Y + LD + ++P++ T++ VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
+AC G +++ K + KY ++ + ++ + ++ G L A + + + +
Sbjct: 207 SACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 435 AKAWGALLNGASVYG 449
KA+ A++ ++YG
Sbjct: 266 VKAYSAMICCLAMYG 280
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 228/421 (54%), Gaps = 14/421 (3%)
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYE----ECKRLYMEMLSVGSVVPDGVTIV 138
+ A VF + T +N++I C +E KR ++EM SV PD T
Sbjct: 64 VSYATSVFRFITNPSTFCFNTII---RICTLHEPSSLSSKRFFVEMRR-RSVPPDFHTFP 119
Query: 139 SVMQACGQSK--DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
V +AC K DL L +H G+ DL N +I +Y+ +D A +LF+E
Sbjct: 120 FVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENP 179
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
++D V+Y +I G + +V+AR++F M L +WN+LISG Q N AI L E
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M GLKP+ V + ST+ + + + GK +H Y R+ + ++AT ++D YAK GF
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
I A ++F+ ++L W A+IT A HG+ L + + +M+ SGI+PD VT +VL
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 377 CAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
C+HSGLVDEA +F+ M S Y + ++ Y CM +L RAG + EAA+ I +MP + +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 437 ----AWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVR 492
AW LL G ++G++E + A + + + PE G Y +M +Y+ A RWEE +VR
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 493 K 493
+
Sbjct: 480 E 480
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 156/364 (42%), Gaps = 71/364 (19%)
Query: 26 ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCY-------- 77
+ PD T V KA A+ VK HC LR GL +D+F N L+ Y
Sbjct: 111 VPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDS 170
Query: 78 -----------------------CRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
+ EI AR++FD MP RD VSWNS+I GY+Q
Sbjct: 171 ALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHC 230
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
E +L+ EM+++G + PD V IVS + AC QS D G +H + + +D L
Sbjct: 231 REAIKLFDEMVALG-LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG 289
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
++ YAKCG +D A E+FE S+K ++ ++I+G +G
Sbjct: 290 LVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHG-------------------- 329
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
+G E +D R+M SG+KP+ VT S + S+ + + + +R
Sbjct: 330 ----NG-------ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMR 377
Query: 295 RCYDQNIYVAT--AIIDTYAKLGFIHGARQVFDQ-----ARSRSLVIWTAIITAYAAHGD 347
YD N + + D + G I A ++ +Q L+ W+ ++ HG+
Sbjct: 378 SLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Query: 348 ASLA 351
+A
Sbjct: 438 IEIA 441
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 254/500 (50%), Gaps = 40/500 (8%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALV--TCYCRCGEIGLARKVFDGMPERDTVSWNSMIG 106
+ +K+ H ++ GL +++ V L+ G + A K+FD +P+ D N ++
Sbjct: 26 RTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 107 GYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
G +Q E+ LY EM G V PD T V++AC + + G HG V G
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRG-VSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 167 VDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKA------- 219
++ + NA+I +A CG L A ELF++ ++ V++ S+ SGY G + +A
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 220 ------------------------RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVR 255
R++F + TWNA+ISG V + + A+ + +
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC-YDQNIYVAT----AIIDT 310
EM+ +G P+ VT+ S + + +L GK +H Y + +IYV T A+ID
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
YAK G I A +VF + R L W +I A H A ++ ++ +M + P++VT
Sbjct: 325 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTF 383
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
V+ AC+HSG VDE K F+ M Y I+P ++ Y CMV +L RAG+L EA F+ M
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 431 IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASR 490
IEP+A W LL +YG+VE GK+A + L + + SG+Y++++N+Y+ G+W+ +
Sbjct: 444 IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQK 503
Query: 491 VRKRMEEIGVHKIRGSSWIE 510
VRK ++ V K G S IE
Sbjct: 504 VRKMFDDTRVKKPTGVSLIE 523
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 192/461 (41%), Gaps = 122/461 (26%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIA-----SPSFSYYKPVKEAHCFVLRRGLETDIFV 69
+ L+ G+SPD +T T VLKA + S F++ H V+R G + +V
Sbjct: 97 VSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF-------HGKVVRHGFVLNEYV 149
Query: 70 ENALVTCYCRCGEIGLAR-------------------------------KVFDGMPERD- 97
+NAL+ + CG++G+A ++FD MP +D
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ 209
Query: 98 ------------------------------TVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
V+WN+MI GY CG+ +E ++ EM
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE-----SGIEVDLPLCNAVIAMYAKC 182
G PD VTI+S++ AC DL G +H ++ E S I V P+ NA+I MYAKC
Sbjct: 270 GE-HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
GS+D A E+F RG+++ L TWN LI G+
Sbjct: 329 GSIDRAIEVF-------------------------------RGVKDRDLSTWNTLIVGLA 357
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD--QN 300
++ EG+I++ EMQ + PN VT I S+ + G++ + +R Y+ N
Sbjct: 358 LHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL-MRDMYNIEPN 415
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYAAHGDASLALGLYAQML 359
I ++D + G + A + + + ++W ++ A +G+ + LG YA
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN--VELGKYANEK 473
Query: 360 DSGIQPDQ----VTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
++ D+ V L+ + + V + K+F+ K
Sbjct: 474 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 514
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y G + L +F DAG PD T+ S+L A A + K H ++L
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA--VLGDLETGKRLHIYILE 303
Query: 61 RG-LETDIFVE----NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS------ 109
+ + I+V NAL+ Y +CG I A +VF G+ +RD +WN++I G +
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG 363
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVD 168
+EE +RL V P+ VT + V+ AC S + G + + + IE +
Sbjct: 364 SIEMFEEMQRL--------KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFV 216
+ ++ M + G L+ A E M E + + + +++ YG V
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNV 464
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 251/457 (54%), Gaps = 8/457 (1%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
A KVFD +PE D +S ++IG + + + E + + +L +G + P+ T +V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG-IRPNEFTFGTVIGSST 104
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
S+D+ LG ++H + + G+ ++ + +AV+ Y K +L AR F++ + + VS +
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK-P 264
+ISGY+ +A +FR M + TWNA+I G Q E A++ +M G+ P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ-NIYVATAIIDTYAKLGFIHGARQV 323
N T I S ++ GK +HA AI+ + N++V ++I Y+K G + +
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 324 FD--QARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQPDQVTLTAVLTACAHS 380
F+ + R++V W ++I YA +G A+ ++ +M+ D+ ++P+ VT+ VL AC H+
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVE--QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
GL+ E + FN + Y L+E YACMV +LSR+G+ EA + I MP++P W
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFW 404
Query: 439 GALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEI 498
ALL G ++ + K A + E++P +Y++++N YS W+ S +R++M+E
Sbjct: 405 KALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKET 464
Query: 499 GVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYL 535
G+ + G SWIE+ ++ F+ D +NE DE+Y L
Sbjct: 465 GLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 175/409 (42%), Gaps = 73/409 (17%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
GI P+ FT +V+ + S + K K+ HC+ L+ GL +++FV +A++ CY + +
Sbjct: 88 GIRPNEFTFGTVIGS--STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLT 145
Query: 85 LARKVFD-------------------------------GMPERDTVSWNSMIGGYSQCGF 113
AR+ FD MPER V+WN++IGG+SQ G
Sbjct: 146 DARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGR 205
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG-FVNESGIEVDLPLC 172
EE +++ML G V+P+ T + A G +H + G ++ +
Sbjct: 206 NEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVW 265
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N++I+ Y+KCG+++ + F ++ E E +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEE-----------------------------EQRNIV 296
Query: 233 TWNALISGMVQNNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
+WN++I G N E A+ + +M + + L+PN VT+ + ++ ++ G
Sbjct: 297 SWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNK 356
Query: 292 AIRRCYDQNIYVA---TAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAIITAYAAHGD 347
A+ D N+ ++D ++ G A ++ + W A++ H +
Sbjct: 357 AVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
LA +++L+ + P V+ + V+ + A+S + E W+ + + K
Sbjct: 417 KRLAKLAASKILE--LDPRDVS-SYVMLSNAYSAM--ENWQNVSLIRRK 460
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 5 YSFNGLYRHLLDLFASSVDAGIS-PDSFTVTSVLKAIASPSFSYYKPVKEAH-CFVLRRG 62
+S G ++ F + G+ P+ T + AI++ + + K H C + G
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN--IASHGAGKSIHACAIKFLG 257
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPE--RDTVSWNSMIGGYSQCGFYEECKRL 120
++FV N+L++ Y +CG + + F+ + E R+ VSWNSMI GY+ G EE +
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACG-----QSKDLVLGMEVHGFVNESGIEVDLPLCNAV 175
+ +M+ ++ P+ VTI+ V+ AC Q + V+ + + + +E++ C +
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYAC--M 375
Query: 176 IAMYAKCGSLDYARELFEEM 195
+ M ++ G A EL + M
Sbjct: 376 VDMLSRSGRFKEAEELIKSM 395
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 296/608 (48%), Gaps = 75/608 (12%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
NG L +F VD G+ PD+ T+ SV++ A + + H + R+ + D
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE--LGCLRIARSVHGQITRKMFDLDE 237
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ N+L+T Y +CG++ + ++F+ + +++ VSW +MI Y++ F E+ R + EM+
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD-----------------LP 170
G + P+ VT+ SV+ +CG + G VHGF ++ + L
Sbjct: 298 G-IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 171 LC---------------NAVIAMYAKCGSLDYARELFEEMSEK----------------- 198
C N++I++YA G + A LF +M +
Sbjct: 357 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 416
Query: 199 ---------------------DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
D+ S+I Y G V A VF +++ + TWN++
Sbjct: 417 NAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
+ G QN AI L M S L+ N VT + I S +L GK VH I
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL 536
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
++++ TA+ID YAK G ++ A VF SRS+V W+++I AY HG A+ + Q
Sbjct: 537 -KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
M++SG +P++V VL+AC HSG V+E FN M S +G+ P E +AC + +LSR+G
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSG 654
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMAN 477
L EA + I EMP A WG+L+NG ++ ++ K + L +I + +G Y +++N
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSN 714
Query: 478 LYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEG 537
+Y+ G WEE R+R M+ + K+ G S IE+ ++ F A + + ++DEIY +L
Sbjct: 715 IYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGN 774
Query: 538 LFCMMREE 545
L + EE
Sbjct: 775 LQNLTNEE 782
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 218/443 (49%), Gaps = 41/443 (9%)
Query: 13 HLLD----LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
HLLD L+ V F SVL+A A S + + H +++ G++ D
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG-SREHLSVGGKVHGRIIKGGVDDDAV 137
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
+E +L+ Y + G + A KVFDGMP RD V+W++++ + G + R++ M+ G
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V PD VT++SV++ C + L + VHG + ++D LCN+++ MY+KCG L +
Sbjct: 198 -VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
+FE++++K+ VS+ ++IS Y F KA F
Sbjct: 257 ERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSF------------------------- 291
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI-YVATAI 307
EM SG++PN VTL S + +R GK VH +A+RR D N ++ A+
Sbjct: 292 ------SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
++ YA+ G + V R++V W ++I+ YA G ALGL+ QM+ I+PD
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
TL + ++AC ++GLV +I + V+ ++ + S++G + A+ +
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFN 463
Query: 428 EMPIEPSAKAWGALLNGASVYGD 450
++ S W ++L G S G+
Sbjct: 464 QIK-HRSVVTWNSMLCGFSQNGN 485
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 195/403 (48%), Gaps = 37/403 (9%)
Query: 44 SFSYYKPVKEAHCFVLRRG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWN 102
S S + V + H +L G L D L+ Y G +R VF+ P D+ +
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKD-LVLGMEVHGFVN 161
+I C + LY ++S + + V SV++AC S++ L +G +VHG +
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQISKFV-FPSVLRACAGSREHLSVGGKVHGRII 128
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARD 221
+ G++ D + +++ MY + G+L A ++F+ M +D V++ +++S + G VVKA
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN 281
+F+ M + G++ P+AVT+ S + +
Sbjct: 189 MFKCMVDDGVE-------------------------------PDAVTMISVVEGCAELGC 217
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
LR + VH R+ +D + + +++ Y+K G + + ++F++ ++ V WTA+I++
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
Y + AL +++M+ SGI+P+ VTL +VL++C GL+ E K + + + P
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFAVRRELDP 336
Query: 402 LVEQYA-CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLN 443
E + +V + + GKLS+ + + + + AW +L++
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLIS 378
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 139/291 (47%), Gaps = 25/291 (8%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPV-KEAHCFVLRRGL 63
Y+ G+ L LF V I PD+FT+ S + A + P+ K+ H V+R +
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV---PLGKQIHGHVIRTDV 436
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL--- 120
+D FV+N+L+ Y + G + A VF+ + R V+WNSM+ G+SQ G E L
Sbjct: 437 -SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495
Query: 121 ----YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
Y+EM + VT ++V+QAC L G VH + SG++ DL A+I
Sbjct: 496 MYHSYLEM--------NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALI 546
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
MYAKCG L+ A +F MS + VS+ S+I+ Y +G + A F M G
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 237 LISGMVQNNWFEGAID----LVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
+ ++ G+++ M+ G+ PN+ A I L S +L+
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML +S NG + LF + + + T +V++A +S + K H ++
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS--IGSLEKGKWVHHKLII 533
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GL+ D+F + AL+ Y +CG++ A VF M R VSW+SMI Y G
Sbjct: 534 SGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIST 592
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +M+ G+ P+ V ++V+ ACG S + G + G+ + I + +
Sbjct: 593 FNQMVESGT-KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLS 651
Query: 181 KCGSLDYARELFEEMSEKDDVS-YGSIISGYMAYGFVVKARDVFRGMEN 228
+ G L A +EM D S +GS+++G + + D+ + ++N
Sbjct: 652 RSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH----QKMDIIKAIKN 696
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 264/507 (52%), Gaps = 13/507 (2%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
NG R +F + +G +S TV SVL + + HC ++ G E ++
Sbjct: 110 NGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD-----IEGGMQLHCLAMKSGFEMEV 164
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+V +LV+ Y RCGE LA ++F+ +P + V++N+ I G + G ++ M
Sbjct: 165 YVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKF 224
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
S P+ VT V+ + AC +L G ++HG V + + + + A+I MY+KC
Sbjct: 225 SSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKS 284
Query: 188 ARELFEEMSE-KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMV 242
A +F E+ + ++ +S+ S+ISG M G A ++F +++ GL TWN+LISG
Sbjct: 285 AYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFS 344
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
Q A M + P+ L S + S L+ GKE+H + I+ +++I+
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 303 VATAIIDTYAKLGFIHGARQVFD--QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
V T++ID Y K G AR++FD + + + V W +I+ Y HG+ A+ ++ + +
Sbjct: 405 VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLRE 464
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
++P T TAVL+AC+H G V++ +IF M +YG +P E CM+ +L R+G+L
Sbjct: 465 EKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLR 524
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
EA + I +M S+ +LL + D G+ A L E+EPE+ ++I++++Y+
Sbjct: 525 EAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYA 583
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSS 507
RWE+ +R+ +++ + K+ G S
Sbjct: 584 ALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 189/389 (48%), Gaps = 41/389 (10%)
Query: 27 SPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLA 86
SP+ FT +LK+ A + H V++ G D+F ALV+ Y + ++ A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRI--LHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA 85
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
KV D MPER S N+ + G + GF + R++ + GS + + VT+ SV+ CG
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM-NSVTVASVLGGCG- 143
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
D+ GM++H +SG E+++ + ++++MY++CG A +FE++ K V+Y +
Sbjct: 144 --DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
ISG M G + VF +L+R+ S +PN
Sbjct: 202 ISGLMENGVMNLVPSVF----------------------------NLMRKF--SSEEPND 231
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
VT + I + NL+ G+++H +++ + V TA+ID Y+K A VF +
Sbjct: 232 VTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE 291
Query: 327 AR-SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ +R+L+ W ++I+ +G A+ L+ ++ G++PD T ++++ + G V E
Sbjct: 292 LKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIE 351
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
A+K F M S +V C+ +LS
Sbjct: 352 AFKFFERMLSVV----MVPSLKCLTSLLS 376
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 269/535 (50%), Gaps = 37/535 (6%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCG---EIGLARKVFDGMPERDTVSWNSMI 105
+ + + H ++ G++TD + L+ +C + AR++ PE D +N+++
Sbjct: 19 RALTQIHGLFIKYGVDTDSYFTGKLIL-HCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
GYS+ +++EM+ G V PD + V++A + L G ++H + G+
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS----------------- 208
E L + +I MY CG +++AR++F+EM + + V++ ++I+
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 209 --------------GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
GY+ G + A+ +F M + +W+ +I G+ N F +
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
RE+Q +G+ PN V+L + S + GK +H + + Y + V A+ID Y++
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 315 GFIHGARQVFD-QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
G + AR VF+ R +V WT++I A HG A+ L+ +M G+ PD ++ ++
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEP 433
L AC+H+GL++E F+ M Y I+P +E Y CMV + R+GKL +A FI +MPI P
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 434 SAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRK 493
+A W LL S +G++E + L E++P +SG+ ++++N Y+ AG+W++ + +RK
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 497
Query: 494 RMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREE-GY 547
M + K S +E+ + F A + E + L+ + +++E GY
Sbjct: 498 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGY 552
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIA-SPSFSYYKPVKEAHCFVL 59
M++ + NG + F AG+SP+ ++T VL A + S SF + K + H FV
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL---HGFVE 296
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPE-RDTVSWNSMIGGYSQCGFYEECK 118
+ G + V NAL+ Y RCG + +AR VF+GM E R VSW SMI G + G EE
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAV 356
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIA 177
RL+ EM + G V PDG++ +S++ AC + + G + + IE ++ ++
Sbjct: 357 RLFNEMTAYG-VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 178 MYAKCGSLDYARELFEEM 195
+Y + G L A + +M
Sbjct: 416 LYGRSGKLQKAYDFICQM 433
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 266/518 (51%), Gaps = 52/518 (10%)
Query: 48 YKPVKEAHCFVLRRGLETDIFVENALVTCYCRC-----GEIGLARKVFDGMPERDTVSWN 102
+ +K+ L G F+ + L+ RC G++ A ++F +P+ T WN
Sbjct: 16 FSQIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWN 72
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVP-----DGVTIVSVMQACGQSKDLVLGMEVH 157
++I G++ Y ML S D +T ++AC ++ ++H
Sbjct: 73 AIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLH 132
Query: 158 GFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVV 217
+N G+ D LC ++ Y+K G L A +LF+EM +D
Sbjct: 133 CQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD------------------ 174
Query: 218 KARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
+ +WNALI+G+V N A++L + M+ G++ + VT+ + + S
Sbjct: 175 -------------VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS 221
Query: 278 YFSNLRGGKEV-HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIW 335
+ +++ G+ + H Y+ + N+ V+ A ID Y+K GF+ A QVF+Q +S+V W
Sbjct: 222 HLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTW 276
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
+IT +A HG+A AL ++ ++ D+GI+PD V+ A LTAC H+GLV+ +FN M
Sbjct: 277 NTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC 336
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGK 455
K G++ ++ Y C+V +LSRAG+L EA I M + P W +LL + +Y DVE +
Sbjct: 337 K-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAE 395
Query: 456 FACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRL 515
A + E+ + G++++++N+Y+ GRW++ RVR ME V KI G S+IE G +
Sbjct: 396 IASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTI 455
Query: 516 IAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEEL 553
F D S+E+ EIY ++ + +RE+GY+ Q L
Sbjct: 456 HEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGL 493
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 14/266 (5%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
D+ T + LKA A S + + HC + RRGL D + L+ Y + G++ A K
Sbjct: 108 DALTCSFTLKACARALCS--SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
+FD MP RD SWN++I G E LY M + G + VT+V+ + AC
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLG 224
Query: 149 DLVLGMEV-HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS-EKDDVSYGSI 206
D+ G + HG+ N++ I + NA I MY+KCG +D A ++FE+ + +K V++ ++
Sbjct: 225 DVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSGL 262
I+G+ +G +A ++F +E+ G+ ++ A ++ E + + M G+
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEV 288
+ N + L S LR ++
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDI 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETD-IFVENAL 73
++L+ GI TV + L A S+ VKE G D + V NA
Sbjct: 195 MELYKRMETEGIRRSEVTVVAALGAC-----SHLGDVKEGENIF--HGYSNDNVIVSNAA 247
Query: 74 VTCYCRCGEIGLARKVFDGMP-ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
+ Y +CG + A +VF+ ++ V+WN+MI G++ G ++ + L + P
Sbjct: 248 IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIF-DKLEDNGIKP 306
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D V+ ++ + AC + + G+ V + G+E ++ V+ + ++ G L A ++
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 193 EEMSE-KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT 233
MS D V + S++ Y V A R ++ G++
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNN 408
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 239/441 (54%), Gaps = 41/441 (9%)
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDT--VSWNSMIGGYSQCGFYEECKRL 120
L ++ + + LV Y CG +A +VFD M +RD+ +WNS+I GY++ G YE+ L
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y +M G V PD T V++ACG + +G +H + + G D+ + NA++ MYA
Sbjct: 183 YFQMAEDG-VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYA 241
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG +VKAR+VF + + +WN++++G
Sbjct: 242 KCGD-------------------------------IVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+ + A+D+ R M +G++P+ V ++S + F + G+++H + IRR +
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWE 327
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
+ VA A+I Y+K G + A +FDQ R V W AII+A H S L + QM
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHR 384
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
+ +PD +T +VL+ CA++G+V++ ++F+ M +YGI P +E YACMV + RAG +
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 421 EA-AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA + + EM +E WGALL ++G+ + G+ A LFE+EP++ N+ ++ +Y
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIY 504
Query: 480 SCAGRWEEASRVRKRMEEIGV 500
S A R E+ RVR+ M + G+
Sbjct: 505 SKAKRAEDVERVRQMMVDRGL 525
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 159/353 (45%), Gaps = 43/353 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ G Y + L+ + G+ PD FT VLKA + + H +++
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG--IGSVQIGEAIHRDLVK 223
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G D++V NALV Y +CG+I AR VFD +P +D VSWNSM+ GY G E +
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDI 283
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M+ G + PD V I SV+ K G ++HG+V G+E +L + NA+I +Y+
Sbjct: 284 FRLMVQNG-IEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYS 339
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
K G L A +F++M E+D VS WNA+IS
Sbjct: 340 KRGQLGQACFIFDQMLERDTVS-------------------------------WNAIISA 368
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC-YDQ 299
+N+ + +M + KP+ +T S + L + + G+ + + + D
Sbjct: 369 HSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQ--ARSRSLVIWTAIITAYAAHGDASL 350
+ +++ Y + G + A + Q +W A++ A HG+ +
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 144/310 (46%), Gaps = 38/310 (12%)
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK 198
S+++ C + + G+ VH + + +L + + ++ +YA CG + A E+F+ MS++
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQ 258
D + WN+LISG + +E A+ L +M
Sbjct: 157 DSSPFA-----------------------------WNSLISGYAELGQYEDAMALYFQMA 187
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
G+KP+ T + +++ G+ +H ++ + ++YV A++ YAK G I
Sbjct: 188 EDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIV 247
Query: 319 GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
AR VFD + V W +++T Y HG AL ++ M+ +GI+PD+V +++VL
Sbjct: 248 KARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL 307
Query: 379 --HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAK 436
G W I + G++ + ++ + S+ G+L +A FI + +E
Sbjct: 308 SFKHGRQLHGWVI------RRGMEWELSVANALIVLYSKRGQLGQAC-FIFDQMLERDTV 360
Query: 437 AWGALLNGAS 446
+W A+++ S
Sbjct: 361 SWNAIISAHS 370
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 255/523 (48%), Gaps = 78/523 (14%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D F N +++ Y + IG A +F+ MPER+ VSW++MI G+ Q G + L+ +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM- 193
Query: 126 SVGSVVPDGVTIVSVMQ---------ACGQSKDLVLGME---------VHGFVNESGIEV 167
V P + +++ GQ LV G E + G+ +E
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEA 253
Query: 168 ------DLP-LC-------------------NAVIAMYAKCGSLDYARELFEEMSEKDDV 201
+P LC N++I Y K G + AR LF++M ++D +
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI 313
Query: 202 SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV------------------- 242
S+ ++I GY+ + A +F M N +WN ++SG
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKH 373
Query: 243 ------------QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
+N ++ A+DL M G KP+ TL S + + NLR G ++H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYAAHGDAS 349
++ ++ V A+I Y++ G I +R++FD+ + R ++ W A+I YA HG+AS
Sbjct: 434 IVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
AL L+ M +GI P +T +VL ACAH+GLVDEA F +M S Y I+P +E Y+ +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
V V S G+ EA I+ MP EP WGALL+ +Y +V A + + +EPESS
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMS 512
Y+++ N+Y+ G W+EAS+VR ME + K RGSSW++ S
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVDSS 655
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 163/400 (40%), Gaps = 78/400 (19%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG---FYEECKRLYMEMLSV 127
N +++ Y + E+ ARK+FD MP+RD V+WN+MI GY CG F EE ++L+ EM S
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
S N +I+ YAK +
Sbjct: 135 DSFS----------------------------------------WNTMISGYAKNRRIGE 154
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN-- 245
A LFE+M E++ VS+ ++I+G+ G V A +FR M AL++G+++N
Sbjct: 155 ALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 246 ----W--------FEGAIDLVREMQ----GSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
W G DLV G G + + + LF +L G + H
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ---VEAARCLFDQIPDLCG--DDH 269
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
R + +N+ ++I Y K+G + AR +FDQ + R + W +I Y
Sbjct: 270 GGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRME 329
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A L+++M + D + +++ A G V+ A F K+ + + +
Sbjct: 330 DAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-----SWNSI 380
Query: 410 VGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLNGAS 446
+ + EA M IE P +LL+ ++
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ AY N Y+ +DLF G PD T+TS+L AS + + H V++
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVK 437
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMP-ERDTVSWNSMIGGYSQCGFYEECKR 119
+ D+ V NAL+T Y RCGEI +R++FD M +R+ ++WN+MIGGY+ G E
Sbjct: 438 TVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALN 496
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQS 147
L+ M S G + P +T VSV+ AC +
Sbjct: 497 LFGSMKSNG-IYPSHITFVSVLNACAHA 523
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 34/200 (17%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF---------- 113
+ D N ++ Y + A +F MP RD SWN M+ GY+ G
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 114 ---------------------YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVL 152
Y+E L++ M ++ PD T+ S++ A +L L
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 153 GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDV-SYGSIISGYM 211
GM++H V ++ I D+P+ NA+I MY++CG + +R +F+EM K +V ++ ++I GY
Sbjct: 428 GMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 212 AYGFVVKARDVFRGMENPGL 231
+G +A ++F M++ G+
Sbjct: 487 FHGNASEALNLFGSMKSNGI 506
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 135/344 (39%), Gaps = 58/344 (16%)
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N + + G + AR++FE++ ++ V++ ++ISGY+ + +AR +F M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
TWN +ISG V G I + E A L +P FS
Sbjct: 104 TWNTMISGYVSC----GGIRFLEE---------ARKLFDEMPSRDSFS------------ 138
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+I YAK I A +F++ R+ V W+A+IT + +G+ A+
Sbjct: 139 -----------WNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAV 187
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTAC-AHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
L+ +M P L A++ + L + AW + G + LV Y ++
Sbjct: 188 VLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIV 243
Query: 412 VLSRAGKLSEAAKFISEMP--------------IEPSAKAWGALLNGASVYGDVETGKFA 457
+ G++ A ++P + +W +++ GDV + +
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 458 CDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
D +++ + ++ M + Y R E+A + M H
Sbjct: 304 FD---QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 251/503 (49%), Gaps = 36/503 (7%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGY 108
K +++ H ++ G + L+T C I +F +P D +NS+I
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
S+ C Y MLS +V P T SV+++C L +G VH SG +D
Sbjct: 83 SKLRLPLHCVAYYRRMLS-SNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN 228
+ A++ Y+KCG ++ AR++F+ M EK V+
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA-------------------------- 175
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
WN+L+SG QN + AI + +M+ SG +P++ T S + + + G V
Sbjct: 176 -----WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H Y I D N+ + TA+I+ Y++ G + AR+VFD+ + ++ WTA+I+AY HG
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Query: 349 SLALGLYAQMLDS-GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
A+ L+ +M D G P+ VT AVL+ACAH+GLV+E ++ M Y + P VE +
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV 350
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKA---WGALLNGASVYGDVETGKFACDHLFEI 464
CMV +L RAG L EA KFI ++ A A W A+L ++ + + G L +
Sbjct: 351 CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIAL 410
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVS 524
EP++ G++++++N+Y+ +G+ +E S +R M + K G S IE+ + F D S
Sbjct: 411 EPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDES 470
Query: 525 NERSDEIYTYLEGLFCMMREEGY 547
++ + EIY YLE L +E GY
Sbjct: 471 HQETGEIYRYLETLISRCKEIGY 493
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 191/391 (48%), Gaps = 49/391 (12%)
Query: 13 HLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENA 72
H + + + + +SP ++T TSV+K+ A S + K HC + G D +V+ A
Sbjct: 90 HCVAYYRRMLSSNVSPSNYTFTSVIKSCA--DLSALRIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
LVT Y +CG++ AR+VFD MPE+ V+WNS++ G+ Q G +E +++ +M G P
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG-FEP 206
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D T VS++ AC Q+ + LG VH ++ G+++++ L A+I +Y++CG + ARE+F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN-----PGLDTWNALISGMVQNNWF 247
++M E + ++ ++IS Y +G+ +A ++F ME+ P T+ A++S
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E + + M S IP G E H +
Sbjct: 327 EEGRSVYKRMTKS---------YRLIP----------GVEHH---------------VCM 352
Query: 308 IDTYAKLGFIHGARQVFDQ----ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
+D + GF+ A + Q ++ + +WTA++ A H + L + + +++ +
Sbjct: 353 VDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI--AL 410
Query: 364 QPDQVTLTAVLTAC-AHSGLVDEAWKIFNTM 393
+PD +L+ A SG DE I + M
Sbjct: 411 EPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASP---SFSYYKPVKEAHCFVLRRGLE 64
NGL + +F ++G PDS T S+L A A S + H +++ GL+
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW-----VHQYIISEGLD 240
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
++ + AL+ Y RCG++G AR+VFD M E + +W +MI Y G+ ++ L+ +M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-----GIEVDLPLCNAVIAMY 179
+P+ VT V+V+ AC + + G V+ + +S G+E + ++ M
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDML 356
Query: 180 AKCGSLDYARELFEEM 195
+ G LD A + ++
Sbjct: 357 GRAGFLDEAYKFIHQL 372
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 262/517 (50%), Gaps = 55/517 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ AYS +GL + +F + + + T+ ++L A S ++P+ HC V++
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS-----HEPL---HCLVVK 274
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG-------F 113
G+ DI V +LV Y RCG + A +++ + V S++ Y++ G +
Sbjct: 275 CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVY 334
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+ + ++L M++ D V +V ++ C +S + +GM +HG+ +SG+ + N
Sbjct: 335 FSKTRQLCMKI--------DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT 233
+I MY+K ++ LFE++ E +S
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLIS------------------------------- 415
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
WN++ISG VQ+ A ++ +M +G L P+A+T+AS + S L GKE+H Y
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+R ++ +V TA+ID YAK G A VF ++ W ++I+ Y+ G AL
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRAL 535
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
Y +M + G++PD++T VL+AC H G VDE F M ++GI P ++ YA MVG+
Sbjct: 536 SCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGL 595
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
L RA +EA I +M I+P + WGALL+ ++ ++E G++ +F ++ ++ G Y
Sbjct: 596 LGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 655
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
++M+NLY+ W++ RVR M++ G G S I
Sbjct: 656 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 214/443 (48%), Gaps = 46/443 (10%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+ +F + + ++P+ FT++ L+A + S+ V++ + + GL+ ++V+ +L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y + G + A+ +FD MPERDTV WN++I GYS+ G+ + +L++ ML G P
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG-FSPSA 151
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T+V+++ CGQ + G VHG +SG+E+D + NA+I+ Y+KC L A LF E
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
M +K VS+ ++I Y G +A VF+ M FE +++
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM--------------------FEKNVEI- 250
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
S + + + S + +H ++ +I V T+++ Y++
Sbjct: 251 ----------------SPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
G + A +++ A+ S+V T+I++ YA GD +A+ +++ ++ D V L +L
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQP-LVEQYACMVGVLSRAGKLS--EAAKFISEMPI 431
C S +D I ++H Y I+ L + + G+++ K E F+ E
Sbjct: 355 HGCKKSSHID----IGMSLHG-YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 432 EPSAKAWGALLNGASVYGDVETG 454
E +W ++++G G T
Sbjct: 410 ETPLISWNSVISGCVQSGRASTA 432
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 197/453 (43%), Gaps = 49/453 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ YS NG LF + G SP + T+ ++L F + H +
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGF--VSQGRSVHGVAAK 179
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLE D V+NAL++ Y +C E+G A +F M ++ TVSWN+MIG YSQ G EE +
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M +V VTI++++ A + L H V + G+ D+ + +++ Y+
Sbjct: 240 FKNMFE-KNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYS 292
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
+CG L A L+ + V SI+S Y G D A++
Sbjct: 293 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG-----------------DMDIAVV-- 333
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
+F L +K +AV L + S++ G +H YAI+
Sbjct: 334 -----YFSKTRQLC-------MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ-ML 359
V +I Y+K + +F+Q + L+ W ++I+ G AS A ++ Q ML
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN-TMHSKYGIQPLVEQYAC--MVGVLSRA 416
G+ PD +T+ ++L C+ ++ ++ T+ + + E + C ++ + ++
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE----NENFVCTALIDMYAKC 497
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
G +A + P W ++++G S+ G
Sbjct: 498 GNEVQAESVFKSIK-APCTATWNSMISGYSLSG 529
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/506 (29%), Positives = 267/506 (52%), Gaps = 36/506 (7%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
VK + F++ G E + ++ N ++ + +CG I AR++FD +PER+ S+ S+I G+
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
G Y E L+ M S + T +++A + +G ++H + G+ +
Sbjct: 202 FGNYVEAFELFKMMWEELSDC-ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF 260
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+ +I MY+KCG ++ AR FE M EK V+
Sbjct: 261 VSCGLIDMYSKCGDIEDARCAFECMPEKTTVA---------------------------- 292
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
WN +I+G + + E A+ L+ +M+ SG+ + TL+ I + + + L K+ HA
Sbjct: 293 ---WNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
IR ++ I TA++D Y+K G + AR VFD+ ++++ W A++ YA HG +
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
A+ L+ +M+ + + P+ VT AVL+ACA+SGL ++ W+IF +M +GI+P YACM+
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 411 GVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSG 470
+L R G L EA FI P++ + W ALLN + ++E G+ + L+ + PE G
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
Query: 471 NYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSD- 529
NY++M N+Y+ G+ EA+ V + +E G+ + +W+E+ + +F++ D + ++
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNET 589
Query: 530 ---EIYTYLEGLFCMMREEGYILQEE 552
+IY ++ L + E GY +E+
Sbjct: 590 VKRQIYQKVDELMEEISEYGYSEEEQ 615
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 203/457 (44%), Gaps = 75/457 (16%)
Query: 91 DGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGV-TIVSVMQACGQSKD 149
D + V+ S I C + E L+ E+L + GV T ++++AC + K
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELF-EILEIRCSFKVGVSTYDALVEACIRLKS 138
Query: 150 LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
+ V+GF+ +G E + + N ++ M+ KCG + AR LF+E+ E++ SY SIISG
Sbjct: 139 IRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISG 198
Query: 210 YMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTL 269
++ +G V+A ++F+ M W E+ AV L
Sbjct: 199 FVNFGNYVEAFELFKMM-------WE--------------------ELSDCETHTFAVML 231
Query: 270 ASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARS 329
++ L S + GK++H A++ N +V+ +ID Y+K G I AR F+
Sbjct: 232 RASAGLGSIYV----GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE 287
Query: 330 RSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV-----------LTACA 378
++ V W +I YA HG + AL L M DSG+ DQ TL+ + LT A
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA 347
Query: 379 HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAW 438
H+ L+ + G + + +V S+ G++ A ++P + +W
Sbjct: 348 HASLI------------RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISW 394
Query: 439 GALLNGASVYGDVETGKFACDHLFE--IEPESSGNYI-IMANLYSCA--GRWEEASRVRK 493
AL+ G + +G G A LFE I + N++ +A L +CA G E+ +
Sbjct: 395 NALMGGYANHG---RGTDAVK-LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFL 450
Query: 494 RMEEIGVHKIRGSSW---IEMSGR------LIAFIAK 521
M E+ K R + IE+ GR IAFI +
Sbjct: 451 SMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR 487
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ +G L L D+G+S D FT++ +++ S + + K+AH ++R
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR--ISTKLAKLELTKQAHASLIR 353
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G E++I ALV Y + G + AR VFD +P ++ +SWN+++GGY+ G + +L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACG------QSKDLVLGM-EVHG 158
+ +M++ +V P+ VT ++V+ AC Q ++ L M EVHG
Sbjct: 414 FEKMIA-ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG 457
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 246/503 (48%), Gaps = 44/503 (8%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
V E+ + T+ + L C G I A KVF M E++ V W SMI GY
Sbjct: 12 VAESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLL 71
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
+KDLV E D+
Sbjct: 72 ------------------------------------NKDLVSARRYFDLSPER----DIV 91
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
L N +I+ Y + G++ AR LF++M +D +S+ +++ GY G + VF M
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ +WN LI G QN + + M G + PN T+ + + GK VH
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 290 AYAIRRCYDQ-NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
Y Y++ ++ V A+ID Y K G I A +VF + R L+ W +I AAHG
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
+ AL L+ +M +SGI PD+VT VL AC H GLV++ FN+M + + I P +E C
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPES 468
+V +LSRAG L++A +FI++MP++ A W LL + VY V+ G+ A + L ++EP +
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 469 SGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERS 528
N+++++N+Y AGR+++A+R++ M + G K G SWIE L+ F + + R+
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRT 451
Query: 529 DEIYTYLEGL--FCMMREEGYIL 549
+E+ L L F ++R+E + +
Sbjct: 452 EELQRILRELKSFNILRDEEHFM 474
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAG-ISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFV 58
++ Y+ NG +L F VD G + P+ T+T VL A A +F + K V H +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV---HKYG 214
Query: 59 LRRGL-ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
G + D+ V+NAL+ Y +CG I +A +VF G+ RD +SWN+MI G + G E
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVI 176
L+ EM + G + PD VT V V+ AC + G+ + + I ++ C V+
Sbjct: 275 LNLFHEMKNSG-ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 177 AMYAKCGSLDYARELFEEMSEK-DDVSYGSIISGYMAY 213
+ ++ G L A E +M K D V + +++ Y
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVY 371
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 257/500 (51%), Gaps = 41/500 (8%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L +F ++A + P T SV+ + + + + + H ++ G E V NA +
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGH-----QVHGLAIKTGYEKYTLVSNATM 330
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
T Y + G A KVF+ + E+D V+WN+MI Y+Q + +Y M +G V PD
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG-VKPDE 389
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T S++ S DL + V + + G+ + + NA+I+ Y+K G ++ A LFE
Sbjct: 390 FTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
K+ +S+ +IISG+ GF + GL+ ++ L+ V+
Sbjct: 447 SLRKNLISWNAIISGFYHNGFPFE-----------GLERFSCLLESEVR----------- 484
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
+ P+A TL++ + + S+L G + HAY +R + + A+I+ Y++
Sbjct: 485 -------ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQVTLTAV 373
G I + +VF+Q + +V W ++I+AY+ HG+ A+ Y M D G + PD T +AV
Sbjct: 538 GTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAV 597
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF--ISEMPI 431
L+AC+H+GLV+E +IFN+M +G+ V+ ++C+V +L RAG L EA ISE I
Sbjct: 598 LSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTI 657
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
W AL + + +GD++ GK L E E + Y+ ++N+Y+ AG W+EA
Sbjct: 658 GSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEET 717
Query: 492 RKRMEEIGVHKIRGSSWIEM 511
R+ + IG K RG SW+ +
Sbjct: 718 RRAINMIGAMKQRGCSWMRL 737
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 202/478 (42%), Gaps = 79/478 (16%)
Query: 2 LIAYSFNGLYRHLLDLFASSVD-AGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
L + +G R+ L LFA + PD ++V+ + + + + HC+ +R
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGG--QVHCYAIR 85
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARK-------------------------------V 89
GL V N L++ Y R G + +K V
Sbjct: 86 SGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEV 145
Query: 90 FDGMPERDTVS-WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSK 148
FD MPERD V+ WN+MI G + G++E L+ EM +G V D +++ C
Sbjct: 146 FDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGFATILSMCDYGS 204
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE--MSEKDDVSYGSI 206
L G +VH V ++G + + NA+I MY C + A +FEE ++ +D V++ +
Sbjct: 205 -LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
I G + RD ++ + R+M + L+P
Sbjct: 264 IDGLAGF-----KRD---------------------------ESLLVFRKMLEASLRPTD 291
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+T S + S + G +VH AI+ Y++ V+ A + Y+ A +VF+
Sbjct: 292 LTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
+ LV W +I++Y A+ +Y +M G++PD+ T ++L + L +
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDV 404
Query: 387 WKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
++ K+G+ +E ++ S+ G++ E A + E + + +W A+++G
Sbjct: 405 LEMVQACIIKFGLSSKIEISNALISAYSKNGQI-EKADLLFERSLRKNLISWNAIISG 461
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 183/391 (46%), Gaps = 41/391 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +Y+ L + + ++ G+ PD FT S+L S + V+ +++
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT--SLDLDVLEMVQAC---IIK 414
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF-YEECKR 119
GL + I + NAL++ Y + G+I A +F+ ++ +SWN++I G+ GF +E +R
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ S ++PD T+ +++ C + L+LG + H +V G + + NA+I MY
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
++CG++ + E+F +MSEKD VS+ S+IS Y +G A + ++ M++ G
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG--------- 585
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR-RCYD 298
+ P+A T ++ + S+ + G E+ +
Sbjct: 586 ---------------------KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVI 624
Query: 299 QNIYVATAIIDTYAKLGFIHGAR---QVFDQARSRSLVIWTAIITAYAAHGDASLALGLY 355
+N+ + ++D + G + A ++ ++ + +W A+ +A AAHGD L +
Sbjct: 625 RNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLG-KMV 683
Query: 356 AQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
A++L + D + A +G+ EA
Sbjct: 684 AKLLMEKEKDDPSVYVQLSNIYAGAGMWKEA 714
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 202/444 (45%), Gaps = 31/444 (6%)
Query: 99 VSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG 158
++ N + G ++ G +L+ ++ ++ PD ++ + +D + G +VH
Sbjct: 22 LNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHC 81
Query: 159 FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVK 218
+ SG+ + N ++++Y + G+L ++ F+E+ E D S+ +++S G +
Sbjct: 82 YAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEY 141
Query: 219 ARDVFRGM-ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
A +VF M E + WNA+I+G ++ + E +++L REM G++ + A+ + +
Sbjct: 142 AFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD 201
Query: 278 YFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR--SRSLVIW 335
Y S L GK+VH+ I+ + V A+I Y + A VF++ R V +
Sbjct: 202 YGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTF 260
Query: 336 TAIITAYAAHG-DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKI-FNTM 393
+I A D SL ++ +ML++ ++P +T +V+ +C+ + + + + T
Sbjct: 261 NVVIDGLAGFKRDESLL--VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTG 318
Query: 394 HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVET 453
+ KY + + M G AA + E E W ++ S Y +
Sbjct: 319 YEKYTL--VSNATMTMYSSFEDFG----AAHKVFESLEEKDLVTWNTMI---SSYNQAKL 369
Query: 454 GKFACD-----HLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
GK A H+ ++P+ +L + + + V+ + + G+ SS
Sbjct: 370 GKSAMSVYKRMHIIGVKPDE----FTFGSLLATSLDLDVLEMVQACIIKFGL-----SSK 420
Query: 509 IEMSGRLIAFIAKDVSNERSDEIY 532
IE+S LI+ +K+ E++D ++
Sbjct: 421 IEISNALISAYSKNGQIEKADLLF 444
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 261/523 (49%), Gaps = 11/523 (2%)
Query: 27 SPDSFTVTSVLKAIASPSFS---YYKPVKEAHCFVLRRGLETDIFVENALVT-CYCRCGE 82
+P S +L S S + +K+ F++ GL F+ L+ C R
Sbjct: 13 APSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCN 72
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVS--V 140
+ AR +FD +T + +++ YS L V VP + V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS-LDYARELFEEMSEKD 199
+++ VH + +SG + + + A++ YA S + AR+LF+EMSE++
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 200 DVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM-Q 258
VS+ +++SGY G + A +F M + +WNA+++ QN F A+ L R M
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
++PN VT+ + + L+ K +HA+A RR +++V+ +++D Y K G +
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 319 GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD---SGIQPDQVTLTAVLT 375
A VF A +SL W ++I +A HG + A+ ++ +M+ + I+PD +T +L
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
AC H GLV + F+ M +++GI+P +E Y C++ +L RAG+ EA + +S M ++
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Query: 436 KAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
WG+LLN ++G ++ + A +L + P + G +MANLY G WEEA R RK +
Sbjct: 433 AIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Query: 496 EEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
+ +K G S IE+ + F + D S+ ++EIY L+ L
Sbjct: 493 KHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 232/448 (51%), Gaps = 33/448 (7%)
Query: 63 LETDIFVENALVTCYCRCGEI-GLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLY 121
L +++ + + LV Y + + + VF MP R+ SWN +IG +S+ GF + L+
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
+ M V PD T+ +++AC S++ G +H + G L + +A++ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 182 CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGM 241
G L +AR+LF++M +D V Y ++ GY+ G A++
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQG--------------------EAML--- 218
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
+ + REM SG ++V + S + L+ GK VH + IRRC +
Sbjct: 219 --------GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL 270
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
+ AI D Y K + A VF R ++ W+++I Y GD ++ L+ +ML
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 362 GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE 421
GI+P+ VT VL+ACAH GLV+++W F M +Y I P ++ YA + +SRAG L E
Sbjct: 331 GIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEE 389
Query: 422 AAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSC 481
A KF+ +MP++P GA+L+G VYG+VE G+ L +++P + Y+ +A LYS
Sbjct: 390 AEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSA 449
Query: 482 AGRWEEASRVRKRMEEIGVHKIRGSSWI 509
AGR++EA +R+ M+E + K+ G S I
Sbjct: 450 AGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 268/548 (48%), Gaps = 70/548 (12%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML YS NG ++ F G + +T SVL A AS S + + HC +++
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS--VSACRVGVQVHCCIVK 255
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G +T+I+V++AL+ Y +C E+ AR + +GM D VSWNSMI G + G E +
Sbjct: 256 SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSK-DLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ M + D TI S++ S+ ++ + H + ++G + NA++ MY
Sbjct: 316 FGRMHERDMKIDD-FTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
AK G +D A ++FE M E +DV +W AL++
Sbjct: 375 AKRGIMDSALKVFEGMIE----------------------KDVI---------SWTALVT 403
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G N ++ A+ L M+ G+ P+ + AS + + + L G++VH I+ +
Sbjct: 404 GNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS 463
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ V +++ Y K G + A +F+ R L+ WT +I YA +
Sbjct: 464 SLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN-------------- 509
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
GL+++A + F++M + YGI P E YACM+ + R+G
Sbjct: 510 ---------------------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDF 548
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+ + + +M +EP A W A+L + +G++E G+ A L E+EP ++ Y+ ++N+Y
Sbjct: 549 VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMY 608
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
S AGR +EA+ VR+ M+ + K G SW+E G++ +F+++D + R EIY+ ++ +
Sbjct: 609 SAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMM 668
Query: 540 CMMREEGY 547
+++E GY
Sbjct: 669 LLIKEAGY 676
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 188/403 (46%), Gaps = 45/403 (11%)
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
E D F N ++ Y + A K+F P ++T+SWN++I GY + G E L+ E
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M S G + P+ T+ SV++ C L+ G ++HG ++G ++D+ + N ++AMYA+C
Sbjct: 116 MQSDG-IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 184 SLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
+ A LFE M EK++V++ S+++GY GF KA + FR
Sbjct: 175 RISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFR------------------ 216
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
DL RE G + N T S + + S R G +VH ++ + NIY
Sbjct: 217 ---------DLRRE----GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
V +A+ID YAK + AR + + +V W ++I G AL ++ +M +
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH-----SKYGIQPLVEQYACMVGVLSRAG 417
++ D T+ ++L A L KI ++ H + Y LV +V + ++ G
Sbjct: 324 MKIDDFTIPSILNCFA---LSRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMYAKRG 378
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV-ETGKFACD 459
+ A K M IE +W AL+ G + G E K C+
Sbjct: 379 IMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 120/228 (52%), Gaps = 6/228 (2%)
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
G +H + + + + +L L + +K G +D AR++F++M E+D+ ++ ++I Y
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
+ A +FR +WNALISG ++ A +L EMQ G+KPN TL S
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR-SR 330
+ + + L G+++H + I+ +D ++ V ++ YA+ I A +F+ +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
+ V WT+++T Y+ +G A A+ + + G Q +Q T +VLTACA
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 267/548 (48%), Gaps = 35/548 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGIS-PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ Y +G +L LF S +G S P+ F T V K+ ++ + K+ H L
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG--RIEEGKQFHGCFL 163
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ GL + FV N LV Y C G A +V D +P D ++S + GY +CG ++E
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+ + + V + +T +S ++ +DL L ++VH + G ++ C A+I MY
Sbjct: 224 V-LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMY 282
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KCG + YA+ +F++ A+++F L+T ++
Sbjct: 283 GKCGKVLYAQRVFDD----------------------THAQNIF-------LNT--TIMD 311
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
Q+ FE A++L +M + PN T A + + S L+ G +H ++ Y
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ V A+++ YAK G I AR+ F R +V W +I+ + HG AL + +M+
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+G P+++T VL AC+H G V++ FN + K+ +QP ++ Y C+VG+LS+AG
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
+A F+ PIE AW LLN V + GK ++ E P SG Y++++N++
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLF 539
+ + WE ++VR M GV K G SWI + + F+A+D + IY ++ +
Sbjct: 552 AKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVM 611
Query: 540 CMMREEGY 547
++ GY
Sbjct: 612 SKIKPLGY 619
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 34/418 (8%)
Query: 33 VTSVLKAIASPSFSYYKPVKEAHCFVLRRGLET-DIFVENALVTCYCRCGEIGLARKVFD 91
+ +LK A+ S+ AH V + D + N+L+ Y +C E ARK+FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 92 GMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLV 151
MPER+ VSW +M+ GY GF E +L+ M G P+ V ++C S +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYM 211
G + HG + G+ + N ++ MY+ C A + +++ D + S +SGY+
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 212 AYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
G + DV R N WN L T S
Sbjct: 214 ECGAFKEGLDVLRKTANEDF-VWNNL------------------------------TYLS 242
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
++ LFS +L +VH+ +R ++ + A+I+ Y K G + A++VFD +++
Sbjct: 243 SLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN 302
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
+ + T I+ AY AL L+++M + P++ T +L + A L+ + + +
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLH 361
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
+ K G + V +V + +++G + +A K S M W +++G S +G
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV-TWNTMISGCSHHG 418
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 256/516 (49%), Gaps = 34/516 (6%)
Query: 35 SVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP 94
+L + S S K +K+ H VLR G + L+ G++ AR+VFD M
Sbjct: 11 QMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70
Query: 95 ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGM 154
+ WN++ GY + E LY +M +G V PD T V++A Q D G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGF 129
Query: 155 EVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYG 214
+H V + G C ++A ++ YM +G
Sbjct: 130 ALHAHVVKYGFG-----CLGIVAT--------------------------ELVMMYMKFG 158
Query: 215 FVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIP 274
+ A +F M+ L WNA ++ VQ A++ +M ++ ++ T+ S +
Sbjct: 159 ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
+L G+E++ A + D NI V A +D + K G AR +F++ + R++V
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVS 278
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM- 393
W+ +I YA +GD+ AL L+ M + G++P+ VT VL+AC+H+GLV+E + F+ M
Sbjct: 279 WSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 394 -HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
+ ++P E YACMV +L R+G L EA +FI +MP+EP WGALL +V+ D+
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI 398
Query: 453 TGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMS 512
G+ D L E P+ +++++N+Y+ AG+W+ +VR +M ++G K+ S +E
Sbjct: 399 LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFE 458
Query: 513 GRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
G++ F D S+ +S IY L+ + +R+ GY+
Sbjct: 459 GKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYV 494
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 191/465 (41%), Gaps = 48/465 (10%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
Y N L L L+ D G+ PD FT V+KAI+ + H V++ G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ--LGDFSCGFALHAHVVKYGFG 141
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
V LV Y + GE+ A +F+ M +D V+WN+ + Q G Y
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG-NSAIALEYFNK 200
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
+ +V D T+VS++ ACGQ L +G E++ + I+ ++ + NA + M+ KCG+
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
+ AR LFEEM +++ VS+ ++I GY G D+ AL
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNG-----------------DSREALT------ 297
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
L MQ GL+PN VT + S+ + GK + ++ D+N+
Sbjct: 298 --------LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS-NDKNLEPR 348
Query: 305 ----TAIIDTYAKLGFIHGARQVFDQARSRSLV-IWTAIITAYAAHGDASLALGLYAQML 359
++D + G + A + + IW A++ A A H D L + ++
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLV 408
Query: 360 DSGIQPD----QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSR 415
++ PD V L+ + A VD+ + +K ++ + +R
Sbjct: 409 ETA--PDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNR 466
Query: 416 AGKLSEAAKFISEM--PIEPSAKAWGALLNGASVYGDVETGKFAC 458
K +K I E I + G + + SV+ DVE + C
Sbjct: 467 GDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKEC 511
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 279/569 (49%), Gaps = 64/569 (11%)
Query: 1 MLIAYSFNGLYRHLLDLF--ASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFV 58
+L ++ NG++ + SVD I PD TV S+ SFS + + H +
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATVVSITSICGDLSFS--REGRAVHGYT 419
Query: 59 LRRGLETDIF-VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEEC 117
+R +++ V N+++ Y +CG A +F RD VSWNSMI +SQ GF +
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 118 KRLYMEMLSVGSVVPDGV-TIVSVMQACGQSKDLVLGMEVHGFVNESG--------IEV- 167
K L+ E++S S + T+++++ +C S L+ G VH ++ + G +E
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETM 539
Query: 168 ----DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY---------------GSIIS 208
DL N+VI+ A G + F+ MS + + + G ++
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 209 GYMAYGFVVK-------------------------ARDVFRGMENPGLDTWNALISGMVQ 243
G +G +K A VF + +P L +WN +IS + Q
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
N L R ++ L+PN +T + + + G + H + IRR + N +V
Sbjct: 660 NKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSG 362
+ A++D Y+ G + +VF + S+ W ++I+A+ HG A+ L+ ++ +S
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
++P++ + ++L+AC+HSG +DE + M K+G++P+ E +V +L RAGKL EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
+FI+ + A WGALL+ + +GD + GK + LFE+EP+++ YI +AN Y
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
G WEEA R+RK +E+ + K+ G S I++
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 135/572 (23%), Positives = 236/572 (41%), Gaps = 74/572 (12%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL--ET 65
NG R L F S +G D+ T + V+ A +S + H V++ G E
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSS--IEELTLGESLHGLVIKSGYSPEA 324
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
+ V N++++ Y +CG+ A VF+ + RD +S N+++ G++ G +EE + +M
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD-LPLCNAVIAMYAKCGS 184
SV + PD T+VS+ CG G VHG+ ++ L + N+VI MY KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN---------------- 228
A LF+ + +D VS+ S+IS + GF KA+++F+ + +
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 229 PGLDTWNALISGMVQNNWFEGAIDL----------------------------------- 253
D+ ++LI G + W + DL
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLES 564
Query: 254 VREMQG----SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
+R Q ++ + +TL TI + G+ H AI+ + + + +I
Sbjct: 565 LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 624
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y + I A +VF +L W +I+A + + L+ + ++P+++T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEIT 681
Query: 370 LTAVLTACAHSGLVDEAWKIF-NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
+L+A G + + + + P V A +V + S G L K
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRN 739
Query: 429 MPIEPSAKAWGALLNGASVYGDVETGKFACDHL---FEIEPESSGNYIIMANLYSCAGRW 485
+ S AW ++++ +G E L E+EP S ++I + + S +G
Sbjct: 740 SGVN-SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS-SFISLLSACSHSGFI 797
Query: 486 EEASRVRKRMEE-IGVHKI-RGSSWI-EMSGR 514
+E K+MEE GV + WI +M GR
Sbjct: 798 DEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGR 829
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 38/332 (11%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
HC + GL D + NAL+ Y + + A VF M RD VSWN+++ G
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHP 270
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI--EVDLPLC 172
+ + + M G D VT V+ AC ++L LG +HG V +SG E + +
Sbjct: 271 RKSLQYFKSMTGSGQEA-DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N++I+MY+KCG + A +FEE+ +D +S +I++G+ A G
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM----------------- 372
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
FE A ++ +MQ ++P+ T+ S + S R G+ VH Y
Sbjct: 373 --------------FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 292 AIR-RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
+R + + V ++ID Y K G A +F R LV W ++I+A++ +G
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 351 ALGLYAQMLD--SGIQPDQVTLTAVLTACAHS 380
A L+ +++ S + T+ A+LT+C S
Sbjct: 479 AKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 149/329 (45%), Gaps = 35/329 (10%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
+ HCF L+ GL D+ + L+T Y R GE+ + +FD + E+D + WNSMI +Q
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G Y L++EM+ G+ +++ M +H E+G+ D L
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM-LHCLAIETGLVGDSSL 225
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
CNA++ +YAK +L A +F M +D VS+ +I++ +A G K+ F+
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS------ 279
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
M GSG + + VT + I S L G+ +H
Sbjct: 280 -------------------------MTGSGQEADTVTFSCVISACSSIEELTLGESLHGL 314
Query: 292 AIRRCY--DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
I+ Y + ++ V +II Y+K G A VF++ R ++ AI+ +AA+G
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFE 374
Query: 350 LALGLYAQMLD-SGIQPDQVTLTAVLTAC 377
A G+ QM IQPD T+ ++ + C
Sbjct: 375 EAFGILNQMQSVDKIQPDIATVVSITSIC 403
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 41/302 (13%)
Query: 156 VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGF 215
VH F + G+ DL + ++ Y + G L + LF+E+ EKD +
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVI-------------- 154
Query: 216 VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
WN++I+ + QN + A+ L EM G + ++ TL
Sbjct: 155 -----------------VWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
S R +H AI + + A+++ YAK + A VF R +V W
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH- 394
I+T A+G +L + M SG + D VT + V++AC+ E + ++H
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSI----EELTLGESLHG 313
Query: 395 ----SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
S Y + V ++ + S+ G +EAA+ + E + + A+LNG + G
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGD-TEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 451 VE 452
E
Sbjct: 373 FE 374
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 253/474 (53%), Gaps = 7/474 (1%)
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y G+I + +F + D + + I S G ++ LY+++LS + P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS-SEINPNEFT 132
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
S++++C G +H V + G+ +D + ++ +YAK G + A+++F+ M
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
E+ VS ++I+ Y G V AR +F M + +WN +I G Q+ + A+ L ++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 257 MQGSGL-KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+ G KP+ +T+ + + S L G+ +H + N+ V T +ID Y+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD-SGIQPDQVTLTAVL 374
+ A VF+ + +V W A+I YA HG + AL L+ +M +G+QP +T L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
ACAH+GLV+E +IF +M +YGI+P +E Y C+V +L RAG+L A + I M ++
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 435 AKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKR 494
+ W ++L ++GD GK ++L + ++SG Y++++N+Y+ G +E ++VR
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 495 MEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
M+E G+ K G S IE+ ++ F A D + +S EIYT L + ++ GY+
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 43/297 (14%)
Query: 6 SFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLET 65
S NGL L+ + + I+P+ FT +S+LK+ ++ K K H VL+ GL
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST------KSGKLIHTHVLKFGLGI 159
Query: 66 DIFV-------------------------------ENALVTCYCRCGEIGLARKVFDGMP 94
D +V A++TCY + G + AR +FD M
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 95 ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGM 154
ERD VSWN MI GY+Q GF + L+ ++L+ G PD +T+V+ + AC Q L G
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 155 EVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYG 214
+H FV S I +++ +C +I MY+KCGSL+ A +F + KD V++ ++I+GY +G
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 215 FVVKARDVFRGMEN-PGLDTWNALISGMVQNNWFEGAID----LVREM-QGSGLKPN 265
+ A +F M+ GL + G +Q G ++ + M Q G+KP
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 18/300 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAG-ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ Y+ +G L LF + G PD TV + L A + + + H FV
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ--IGALETGRWIHVFVK 286
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ ++ V L+ Y +CG + A VF+ P +D V+WN+MI GY+ G+ ++ R
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAM 178
L+ EM + + P +T + +QAC + + G+ + E GI+ + ++++
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 179 YAKCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
+ G L A E + M+ + D V + S++ +G V +++ + GL+ N+
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL--IGLNIKNSG 464
Query: 238 ISGMVQNNW-----FEGAIDLVREMQGSGL--KPNAVTLASTIPLFSYFSNLRGGKEVHA 290
I ++ N + +EG + M+ G+ +P STI + + R G H+
Sbjct: 465 IYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG----ISTIEIENKVHEFRAGDREHS 520
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 242/463 (52%), Gaps = 1/463 (0%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS-VVPDGVTIVSVMQAC 144
A ++ D + + NSMI + + E+ Y +LS G+ + PD T+ ++QAC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
+ G++VHG G + D + +I++YA+ G LD ++F + D V
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
++++ G VV AR +F GM WNA+ISG Q A+++ MQ G+K
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
N V + S + + L G+ H+Y R + +AT ++D YAK G + A +VF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 325 DQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
+++ W++ + A +G L L++ M G+ P+ VT +VL C+ G VD
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 385 EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
E + F++M +++GI+P +E Y C+V + +RAG+L +A I +MP++P A W +LL+
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 445 ASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIR 504
+ +Y ++E G A + E+E + G Y++++N+Y+ + W+ S VR+ M+ GV K
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 505 GSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
G S +E++G + F D S+ + +I + + +R GY
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGY 521
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 169/385 (43%), Gaps = 74/385 (19%)
Query: 10 LYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFV 69
YR +L S + PD++TV +++A + + H +RRG + D V
Sbjct: 93 FYRRIL-----SSGNDLKPDNYTVNFLVQACTG--LRMRETGLQVHGMTIRRGFDNDPHV 145
Query: 70 ENALVTCYC-------------------------------RCGEIGLARKVFDGMPERDT 98
+ L++ Y RCG++ ARK+F+GMPERD
Sbjct: 146 QTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDP 205
Query: 99 VSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG 158
++WN+MI GY+Q G E ++ ++ + V +GV ++SV+ AC Q L G H
Sbjct: 206 IAWNAMISGYAQVGESREALNVF-HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHS 264
Query: 159 FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVK 218
++ + I++ + L ++ +YAKCG ++ A E+F M EK+ ++ S ++G
Sbjct: 265 YIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG--------- 315
Query: 219 ARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSY 278
+ N + E ++L M+ G+ PNAVT S + S
Sbjct: 316 ----------------------LAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 279 FSNLRGGKEVHAYAIRRCY--DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS-LVIW 335
+ G+ H ++R + + + ++D YA+ G + A + Q + +W
Sbjct: 354 VGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 336 TAIITAYAAHGDASLALGLYAQMLD 360
++++ A + + L + +ML+
Sbjct: 413 SSLLHASRMYKNLELGVLASKKMLE 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ G R L++F G+ + + SVL A + AH ++ R
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ--LGALDQGRWAHSYIER 268
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
++ + + LV Y +CG++ A +VF GM E++ +W+S + G + GF E+C L
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHG------FVNESGIEVDLPLCNA 174
+ M G V P+ VT VSV++ C V+G G NE GIE L
Sbjct: 329 FSLMKQDG-VTPNAVTFVSVLRGCS-----VVGFVDEGQRHFDSMRNEFGIEPQLEHYGC 382
Query: 175 VIAMYAKCGSLDYARELFEEMSEK 198
++ +YA+ G L+ A + ++M K
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMK 406
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 221/403 (54%), Gaps = 32/403 (7%)
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
D+ LG +H V SG + + N+++ +YA CG + A ++F++M EKD V+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA------ 56
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
WN++I+G +N E A+ L EM G+KP+ T
Sbjct: 57 -------------------------WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 269 LASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR 328
+ S + + L GK VH Y I+ +N++ + ++D YA+ G + A+ +FD+
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 329 SRSLVIWTAIITAYAAHGDASLALGLYAQMLDS-GIQPDQVTLTAVLTACAHSGLVDEAW 387
++ V WT++I A +G A+ L+ M + G+ P ++T +L AC+H G+V E +
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
+ F M +Y I+P +E + CMV +L+RAG++ +A ++I MP++P+ W LL +V
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 448 YGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
+GD + +FA + ++EP SG+Y++++N+Y+ RW + ++RK+M GV K+ G S
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 508 WIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQ 550
+E+ R+ F+ D S+ +SD IY L+ + +R EGY+ Q
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 374
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 162/316 (51%), Gaps = 37/316 (11%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
H V+R G + I+V+N+L+ Y CG++ A KVFD MPE+D V+WNS+I G+++ G
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 70
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
EE LY EM S G + PDG TIVS++ AC + L LG VH ++ + G+ +L N
Sbjct: 71 EEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
++ +YA+CG ++ A+ LF+EM +K+ VS+ S+I G GF +A ++F+ ME+
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST----- 184
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
GL P +T + S+ ++ G E + +R
Sbjct: 185 -------------------------EGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMR 218
Query: 295 RCY--DQNIYVATAIIDTYAKLGFIHGARQ-VFDQARSRSLVIWTAIITAYAAHGDASLA 351
Y + I ++D A+ G + A + + ++VIW ++ A HGD+ LA
Sbjct: 219 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Query: 352 LGLYAQMLDSGIQPDQ 367
Q+L ++P+
Sbjct: 279 EFARIQILQ--LEPNH 292
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 279 FSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI 338
+++R G+ +H+ IR + IYV +++ YA G + A +VFD+ + LV W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
I +A +G AL LY +M GI+PD T+ ++L+ACA G + ++ M K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
+ + ++ + +R G++ EA EM ++ ++ +W +L+ G +V G GK A
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAI 175
Query: 459 DHLFEIEPESSG----NYIIMANLYSCA--GRWEEASRVRKRMEE 497
+ LF+ + G + LY+C+ G +E +RM E
Sbjct: 176 E-LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 219
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 3/198 (1%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
++ NG L L+ GI PD FT+ S+L A A K H ++++ GL
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK--IGALTLGKRVHVYMIKVGLT 121
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
++ N L+ Y RCG + A+ +FD M ++++VSW S+I G + GF +E L+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCG 183
S ++P +T V ++ AC + G E + E IE + ++ + A+ G
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 184 SLDYARELFEEMSEKDDV 201
+ A E + M + +V
Sbjct: 242 QVKKAYEYIKSMPMQPNV 259
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 230/439 (52%), Gaps = 33/439 (7%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+ L C+ R G++ R++F +P+ +WN+M+ GYS YEE + +M ++
Sbjct: 355 SVLGACF-RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM-QFQNL 412
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD T+ ++ +C + + L G ++HG V + I + + + +IA+Y++C ++ +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F++ + D++ WN++ISG N A
Sbjct: 473 IFDDCINELDIA------------------------------CWNSMISGFRHNMLDTKA 502
Query: 251 IDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
+ L R M Q + L PN + A+ + S +L G++ H ++ Y + +V TA+ D
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTD 562
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y K G I ARQ FD ++ VIW +I Y +G A+GLY +M+ SG +PD +T
Sbjct: 563 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 622
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
+VLTAC+HSGLV+ +I ++M +GI+P ++ Y C+V L RAG+L +A K
Sbjct: 623 FVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEAT 682
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEAS 489
P + S+ W LL+ V+GDV + + L ++P+SS Y++++N YS +W++++
Sbjct: 683 PYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSA 742
Query: 490 RVRKRMEEIGVHKIRGSSW 508
++ M + VHK G SW
Sbjct: 743 ALQGLMNKNRVHKTPGQSW 761
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 211/417 (50%), Gaps = 34/417 (8%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D++ NA +T C+ G++G A +VFDGMPERD VSWN+MI + GF E+ +Y M+
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
G +P T+ SV+ AC + D V GM HG ++G++ ++ + NA+++MYAKCG +
Sbjct: 131 CDG-FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 186 -DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
DY +FE +S+ ++VSY ++I G V++A +FR M G+ + +S ++
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
+ D + E+ G+ L GK++H A+R + ++++
Sbjct: 250 SAPREGCDSLSEIYGNEL----------------------GKQIHCLALRLGFGGDLHLN 287
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
++++ YAK ++GA +F + ++V W +I + + ++ +M DSG Q
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
P++VT +VL AC SG V+ +IF+++ QP V + M+ S EA
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 425 FISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL 478
+M ++P +L+ + +E GK H I E S N I++ L
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI--HGVVIRTEISKNSHIVSGL 457
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/566 (23%), Positives = 241/566 (42%), Gaps = 87/566 (15%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G L ++ V G P FT+ SVL A + + H ++ GL+ +IF
Sbjct: 117 GFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG--MRCHGVAVKTGLDKNIF 174
Query: 69 VENALVTCYCRCGEI-GLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
V NAL++ Y +CG I +VF+ + + + VS+ ++IGG ++ E +++ M
Sbjct: 175 VGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEK 234
Query: 128 GSVVPDGVTIVSVM------QACGQSKDLV---LGMEVHGFVNESGIEVDLPLCNAVIAM 178
G V D V + +++ + C ++ LG ++H G DL L N+++ +
Sbjct: 235 G-VQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEI 293
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGY-------MAYGFVVKARD---------- 221
YAK ++ A +F EM E + VS+ +I G+ + F+ + RD
Sbjct: 294 YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTC 353
Query: 222 ------------------VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
+F + P + WNA++SG +E AI R+MQ LK
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
P+ TL+ + + L GGK++H IR +N ++ + +I Y++ + + +
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 473
Query: 324 FDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ-PDQVTLTAVLTACAH-- 379
FD + + W ++I+ + + + AL L+ +M + + P++ + VL++C+
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 380 --------------SGLVDEAW--KIFNTMHSKYGIQPLVEQY------------ACMVG 411
SG V +++ M+ K G Q+ M+
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 412 VLSRAGKLSEAAKFISEMPI---EPSAKAWGALLNGASVYGDVETG---KFACDHLFEIE 465
G+ EA +M +P + ++L S G VETG + + IE
Sbjct: 594 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIE 653
Query: 466 PESSGNYIIMANLYSCAGRWEEASRV 491
PE +YI + + AGR E+A ++
Sbjct: 654 PELD-HYICIVDCLGRAGRLEDAEKL 678
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 12/302 (3%)
Query: 153 GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMA 212
G +HGF+ G++ D LCN ++ +Y +CG DYAR++F+EMS +D S+ + ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 213 YGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
G + +A +VF GM + +WN +IS +V+ + E A+ + + M G P+ TLAS
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI--HGARQVFDQARSR 330
+ S + G H A++ D+NI+V A++ YAK GFI +G R VF+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR-VFESLSQP 203
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD------ 384
+ V +TA+I A A+ ++ M + G+Q D V L+ +L+ A D
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 385 --EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALL 442
E K + + + G + ++ + ++ ++ A +EMP E + +W ++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMI 322
Query: 443 NG 444
G
Sbjct: 323 VG 324
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 38/355 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
ML YS Y + F + PD T++ +L + A F + K+ H V+R
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF--LEGGKQIHGVVIR 444
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDG-MPERDTVSWNSMIGGYSQCGFYEECKR 119
+ + + + L+ Y C ++ ++ +FD + E D WNSMI G+ +
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
L+ M + P+ + +V+ +C + L+ G + HG V +SG D + A+ MY
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KCG +D AR+ F+ + K+ V + +I GY G RG E
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG---------RGDE------------ 603
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY-- 297
A+ L R+M SG KP+ +T S + S+ + G E+ + +++R +
Sbjct: 604 ----------AVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILS-SMQRIHGI 652
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGDASLA 351
+ + I+D + G + A ++ + + S V+W ++++ HGD SLA
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 707
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 250/460 (54%), Gaps = 11/460 (2%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K H ++ G+ +D+ V ++L++ Y +CG + ARKVFD MPER+ +WN+MIGGY
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G L+ E+ SV + VT + +++ G+ ++ E+ F ++
Sbjct: 126 GDAVLASGLFEEI----SVCRNTVTWIEMIKGYGKRIEIEKAREL--FERMPFELKNVKA 179
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
+ ++ +Y ++ AR+ FE++ EK+ + ++SGY G V +AR +F + L
Sbjct: 180 WSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
WN LI+G QN + + AID MQG G +P+AVT++S + + L G+EVH+
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
R + N +V+ A+ID YAK G + A VF+ RS+ ++I+ A HG A
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
L +++ M ++PD++T AVLTAC H G + E KIF+ M ++ ++P V+ + C++
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIH 418
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFA---CDHLFEIEPES 468
+L R+GKL EA + + EM ++P+ GALL V+ D E + + I
Sbjct: 419 LLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSY 478
Query: 469 SGNYII-MANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
S N++ ++NLY+ RW+ A +R ME+ G+ K G S
Sbjct: 479 SENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 35/342 (10%)
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
LY + G P V ++ AC + +VLG +H + G+ D+ + +++I+MY
Sbjct: 33 LYGGIRRRGVYFPGWVPLILRACACVVPR-VVLGKLLHSESIKFGVCSDVMVGSSLISMY 91
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME-NPGLDTWNALI 238
KCG + AR++F+EM E++ ++ ++I GYM+ G V A +F + TW +I
Sbjct: 92 GKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMI 151
Query: 239 SGMVQNNWFEGAIDLVREM--QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
G + E A +L M + +K +V L + N R ++ +
Sbjct: 152 KGYGKRIEIEKARELFERMPFELKNVKAWSVMLG-------VYVNNRKMEDARKF-FEDI 203
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
++N +V + ++ Y ++G +H AR +F + +R LVIW +I YA +G + A+ +
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRA 416
M G +PD VT++++L+ACA SG +D ++ + ++ + GI
Sbjct: 264 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GI----------------- 305
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
E +F+S I+ AK G L N SV+ + AC
Sbjct: 306 ----ELNQFVSNALIDMYAKC-GDLENATSVFESISVRSVAC 342
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ NG +D F + G PD+ TV+S+L A A +E H +
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS--GRLDVGREVHSLINH 302
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
RG+E + FV NAL+ Y +CG++ A VF+ + R NSMI + G +E +
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M S+ + PD +T ++V+ AC L+ G+++ + ++ ++ +I +
Sbjct: 363 FSTMESL-DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 421
Query: 181 KCGSLDYARELFEEMSEK-DDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+ G L A L +EM K +D G+++ + A V + +E G
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 240/462 (51%), Gaps = 31/462 (6%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
A +F G+ + T +N+MI GY +EE Y EM+ G+ PD T +++AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE-PDNFTYPCLLKACT 143
Query: 146 QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+ K + G ++HG V + G+E D+ + N++I MY +CG ++ + +FE++ K S+ S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
++S G + +FRGM + A SGMV S L
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSE--TNLKAEESGMV-----------------SALLAC 244
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
A T A L G +H + +R + NI V T+++D Y K G + A +F
Sbjct: 245 ANTGA-----------LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ R+ + ++A+I+ A HG+ AL ++++M+ G++PD V +VL AC+HSGLV E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
++F M + ++P E Y C+V +L RAG L EA + I +PIE + W L+
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
V ++E G+ A L ++ + G+Y++++NLYS W++ +R R + G+ + G
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 506 SSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
S +E+ G+ F+++D S+ + EIY L + ++ EGY
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 122/222 (54%), Gaps = 2/222 (0%)
Query: 11 YRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVE 70
+ L + + G PD+FT +LKA + K+ H V + GLE D+FV+
Sbjct: 113 FEEALCFYNEMMQRGNEPDNFTYPCLLKACTR--LKSIREGKQIHGQVFKLGLEADVFVQ 170
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N+L+ Y RCGE+ L+ VF+ + + SW+SM+ + G + EC L+ M S ++
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
+ +VS + AC + L LGM +HGF+ + E+++ + +++ MY KCG LD A
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
+F++M ++++++Y ++ISG +G A +F M GL+
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 259/512 (50%), Gaps = 48/512 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +Y G + + LF + I P++ T+TSVL+ A + S + K HC+ ++
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS--RLGKSIHCYAIK 429
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+E+++ A+++ Y +CG A K F+ +P +D V++N++ GY+Q G + +
Sbjct: 430 ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDV 489
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
Y M + V PD T+V ++Q C D G V+G + + G + + + +A+I M+
Sbjct: 490 YKNM-KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFT 548
Query: 181 KCGSLDYARELFEEMS-EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KC +L A LF++ EK VS WN +++
Sbjct: 549 KCDALAAAIVLFDKCGFEKSTVS-------------------------------WNIMMN 577
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G + + E A+ R+M+ +PNAVT + + + S LR G VH+ I+ +
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
V +++D YAK G I + + F + ++ +V W +++AYAAHG AS A+ L+ M
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
++ ++PD V+ +VL+AC H+GLV+E +IF M ++ I+ VE YACMV +L +AG
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 420 SEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLY 479
EA + + M ++ S WGALLN + ++ ++ A L ++EP + +Y L
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL- 816
Query: 480 SCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
G SR++ K+ SWIE+
Sbjct: 817 ---GEVNNVSRIK---------KVPACSWIEV 836
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 222/454 (48%), Gaps = 45/454 (9%)
Query: 1 MLIAYSFNGLYRHLLDLFA-SSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL 59
M+ Y+ GL+R L F S + GI PD ++ T LKA A S + K ++ H +
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG-SMDFKKGLR-IHDLIA 127
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
GLE+D+++ ALV YC+ ++ AR+VFD M +D V+WN+M+ G +Q G
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
L+ +M S V D V++ +++ A + + + +HG V + G + +I MY
Sbjct: 188 LFHDMRSC-CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMY 244
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
C L A +FEE+ KD+ S+G++++ Y GF
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF------------------------ 280
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
FE ++L M+ ++ N V AS + +Y +L G +H YA+++
Sbjct: 281 -------FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ VAT+++ Y+K G + A Q+F R +V W+A+I +Y G A+ L+ M+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRA 416
I+P+ VTLT+VL CA A ++ ++H K I+ +E ++ + ++
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVA----ASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
G+ S A K +PI+ A A+ AL G + GD
Sbjct: 450 GRFSPALKAFERLPIK-DAVAFNALAQGYTQIGD 482
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 241/548 (43%), Gaps = 102/548 (18%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFT----------VTSVLKAIASPSFSYYKP 50
M+ AY+ NG + +L+LF + + + V ++K IA
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA--------- 321
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
H + +++GL D+ V +L++ Y +CGE+ +A ++F + +RD VSW++MI Y Q
Sbjct: 322 ---IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
G ++E L+ +M+ + + P+ VT+ SV+Q C LG +H + ++ IE +L
Sbjct: 379 AGQHDEAISLFRDMMRI-HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
AVI+MYAKCG A + FE + KD V++ ++ GY G KA DV++
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN----- 492
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
M+ G+ P++ T+ + ++ S+ G V+
Sbjct: 493 --------------------------MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYAAHGDAS 349
I+ +D +VA A+I+ + K + A +FD+ +S V W ++ Y HG A
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACA-----------HS------------------ 380
A+ + QM QP+ VT ++ A A HS
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 381 ------GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF---ISEMPI 431
G+++ + K F + +KY + + M+ + G S A + E +
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKY-----IVSWNTMLSAYAAHGLASCAVSLFLSMQENEL 701
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFE---IEPESSGNYIIMANLYSCAGRWEEA 488
+P + ++ ++L+ G VE GK + + E IE E +Y M +L AG + EA
Sbjct: 702 KPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE-HYACMVDLLGKAGLFGEA 760
Query: 489 SRVRKRME 496
+ +RM
Sbjct: 761 VEMMRRMR 768
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 205/486 (42%), Gaps = 79/486 (16%)
Query: 48 YKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGG 107
++ + + H ++ GL+ N L+ Y L+R +FD + + V WNSMI G
Sbjct: 18 FRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRG 73
Query: 108 YSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
Y++ G + E + M + PD + ++AC S D G+ +H + E G+E
Sbjct: 74 YTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES 133
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
D+ + A++ MY K L AR++F++M KD V++
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW------------------------ 169
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
N ++SG+ QN A+ L +M+ + + V+L + IP S +
Sbjct: 170 -------NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 288 VHAYAIRRCYDQNIYV-ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
+H I++ + I+ ++ +ID Y ++ A VF++ + W ++ AYA +G
Sbjct: 223 LHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN--------------- 391
L L+ M + ++ ++V + L A A+ G + + I +
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 392 ---TMHSKYGIQPLVEQ------------YACMVGVLSRAGKLSEAAKFISEM---PIEP 433
+M+SK G + EQ ++ M+ +AG+ EA +M I+P
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 434 SAKAWGALLNGASVYGDVETGK----FACDHLFEIEPESSGNYIIMANLYSCAGRWEEAS 489
+A ++L G + GK +A E E E++ I M Y+ GR+ A
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM---YAKCGRFSPAL 456
Query: 490 RVRKRM 495
+ +R+
Sbjct: 457 KAFERL 462
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 267/499 (53%), Gaps = 39/499 (7%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ H +V++ GL V N L+ Y + +R+ F+ P++ + +W+S+I ++Q
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ-- 93
Query: 113 FYEECKRLYMEMLS---VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
E + +E L G++ PD + S ++C +G VH ++G + D+
Sbjct: 94 --NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
+ ++++ MYAKCG + YAR++F+EM +++ V++ ++ GY G EN
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG------------EN- 198
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
E A+ L +E L N + +S I + + + L G+++H
Sbjct: 199 ------------------EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
+I+ +D + +V ++++ Y+K G GA QVF++ ++L IW A++ AYA H
Sbjct: 241 GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQ 300
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
+ L+ +M SG++P+ +T VL AC+H+GLVDE F+ M I+P + YA +
Sbjct: 301 KVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASL 359
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
V +L RAG+L EA + I+ MPI+P+ WGALL +V+ + E FA D +FE+ P SS
Sbjct: 360 VDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSS 419
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSD 529
G +I ++N Y+ GR+E+A++ RK + + G K G SW+E ++ F A + +E+S
Sbjct: 420 GMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSK 479
Query: 530 EIYTYLEGLFCMMREEGYI 548
EIY L L M + GYI
Sbjct: 480 EIYEKLAELGEEMEKAGYI 498
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 35/338 (10%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L+ + + PD + S K+ A S + HC ++ G + D+FV ++LV
Sbjct: 101 LEFLKKMMAGNLRPDDHVLPSATKSCAI--LSRCDIGRSVHCLSMKTGYDADVFVGSSLV 158
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +CGEI ARK+FD MP+R+ V+W+ M+ GY+Q G EE L+ E L V D
Sbjct: 159 DMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND- 217
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
+ SV+ C S L LG ++HG +S + + ++++++Y+KCG + A ++F E
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
+ K+ L WNA++ Q++ + I+L
Sbjct: 278 VPVKN-------------------------------LGIWNAMLKAYAQHSHTQKVIELF 306
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
+ M+ SG+KPN +T + + S+ + G+ + +++D +
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRA 366
Query: 315 GFIHGARQVF-DQARSRSLVIWTAIITAYAAHGDASLA 351
G + A +V + + +W A++T+ H + LA
Sbjct: 367 GRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 185/426 (43%), Gaps = 71/426 (16%)
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
I ++ + +++ + G+++HG+V +SG+ + + N +I Y+K +R FE+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVRE 256
+K ++ SIIS + QN +++ +++
Sbjct: 78 QKSSTTWSSIISCF-------------------------------AQNELPWMSLEFLKK 106
Query: 257 MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGF 316
M L+P+ L S + S G+ VH +++ YD +++V ++++D YAK G
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE 166
Query: 317 IHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTA 376
I AR++FD+ R++V W+ ++ YA G+ AL L+ + L + + + ++V++
Sbjct: 167 IVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISV 226
Query: 377 CAHSGLVDEAWKIFN------------------TMHSKYGIQPLVEQYACMVGVL----- 413
CA+S L++ +I +++SK G+ Q V V
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 414 ----------SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
S K+ E K + ++P+ + +LN S G V+ G++ D + E
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346
Query: 464 --IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG----SSWIEMSGRLIA 517
IEP + +Y + ++ AGR +EA V M + G S + + L A
Sbjct: 347 SRIEP-TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAA 405
Query: 518 FIAKDV 523
F A V
Sbjct: 406 FAADKV 411
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 266/560 (47%), Gaps = 42/560 (7%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
D SPD S++ A + ++ H +LRRG+ + V LV+C
Sbjct: 22 DRQASPDESHFISLIHACKDTA-----SLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKS 75
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ +F ER+ N++I G ++ +E R ++ ML +G V PD +T V++
Sbjct: 76 PDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLG-VKPDRLTFPFVLK 134
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE-------- 194
+ + LG +H ++ ++ D + +++ MYAK G L +A ++FEE
Sbjct: 135 SNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKE 194
Query: 195 ---------------------------MSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
M E++ S+ ++I GY+ G + +A+ +F M
Sbjct: 195 SILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+ +W LI+G Q +E AI EM GLKPN T+A+ + S L G
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGD 347
+H Y + + + TA++D YAK G + A VF + ++ WTA+I +A HG
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
A+ + QM+ SG +PD+V AVLTAC +S VD F++M Y I+P ++ Y
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
+V +L RAGKL+EA + + MPI P W AL + + +L E++PE
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE 494
Query: 468 SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNER 527
G+YI + ++ G ++ + R +++ + G S+IE+ G+L F A D S++
Sbjct: 495 LCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKL 554
Query: 528 SDEIYTYLEGLFCMMREEGY 547
+ EI L+ + + ++GY
Sbjct: 555 TQEIGLKLDEIISLAIQKGY 574
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAH--CFVLRRG 62
Y+ G +H +F S D I +S + +VL + Y K+ H + R
Sbjct: 171 YAKTGQLKHAFQVFEESPDR-IKKESILIWNVL-------INGYCRAKDMHMATTLFRSM 222
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
E + + L+ Y GE+ A+++F+ MPE++ VSW ++I G+SQ G YE Y
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
EML G + P+ TI +V+ AC +S L G+ +HG++ ++GI++D + A++ MYAKC
Sbjct: 283 EMLEKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
G LD A +F M+ KD +S+ ++I G+ +G +A FR M
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ +S G Y + + ++ G+ P+ +T+ +VL A S S + ++ H ++L
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSA-CSKSGALGSGIR-IHGYILD 321
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G++ D + ALV Y +CGE+ A VF M +D +SW +MI G++ G + + +
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN-ESGIEVDLPLCNAVIAMY 179
+ +M+ G PD V ++V+ AC S ++ LG+ + + IE L V+ +
Sbjct: 382 FRQMMYSGEK-PDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 180 AKCGSLDYARELFEEMSEKDDVS 202
+ G L+ A EL E M D++
Sbjct: 441 GRAGKLNEAHELVENMPINPDLT 463
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 273/531 (51%), Gaps = 25/531 (4%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
++EA R ++ A+V+ Y R ++ +A +F MPER+ VSWN+MI GY+Q
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 111 CGFYEECKRLYMEM-----LSVGSVVPDGVTIVSVMQACG-----QSKD------LVLGM 154
G ++ L+ EM +S S+V V + +A +D +V G+
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL 212
Query: 155 EVHGFVNESG------IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
+G V+E+ E ++ NA+I YA+ +D A +LF+ M E+D S+ ++I+
Sbjct: 213 AKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG-LKPNAV 267
G++ + KA +F M + +W +I+G V+N E A+++ +M G +KPN
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T S + S + L G+++H + + +N V +A+++ Y+K G + AR++FD
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 328 R--SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
R L+ W ++I YA HG A+ +Y QM G +P VT +L AC+H+GLV++
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
+ F + + E Y C+V + RAG+L + FI+ S +GA+L+
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSAC 512
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG 505
+V+ +V K + E + +G Y++M+N+Y+ G+ EEA+ +R +M+E G+ K G
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPG 572
Query: 506 SSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYILQEELDCE 556
SW+++ + F+ D S+ + + + + L L MR+ + + + E
Sbjct: 573 CSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEAE 623
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 211/456 (46%), Gaps = 56/456 (12%)
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
L+ C+ G+I ARK+FDG+PERD V+W +I GY + G E + L+ + S +V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV-- 109
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
VT +++ +SK L + + + E ++ N +I YA+ G +D A ELF
Sbjct: 110 --VTWTAMVSGYLRSKQLSIA----EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
+EM E++ VS+ S++ + G + +A ++F M + +W A++ G+ +N G +D
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKN----GKVD 219
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
R + + N ++ + I Y N R + + + +++ +I +
Sbjct: 220 EARRLFDCMPERNIISWNAMIT--GYAQNNRIDEADQLFQV--MPERDFASWNTMITGFI 275
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQPDQVTLT 371
+ ++ A +FD+ ++++ WT +IT Y + + AL ++++ML D ++P+ T
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 372 AVLTACAH-SGLVDEAWKIFN------------------TMHSKYG-------------- 398
++L+AC+ +GLV E +I M+SK G
Sbjct: 336 SILSACSDLAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGK 455
Q + + M+ V + G EA + ++M +PSA + LL S G VE G
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 456 FACDHLFEIE--PESSGNYIIMANLYSCAGRWEEAS 489
L E P +Y + +L AGR ++ +
Sbjct: 455 EFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVT 490
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 204/397 (51%), Gaps = 31/397 (7%)
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM 195
T ++Q C Q K+ G +H + G ++ L ++ +YA G L A LF +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 196 SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVR 255
+D + + ++ISGY V +G+E GL +
Sbjct: 170 KIRDLIPWNAMISGY-----------VQKGLEQEGLFIYY-------------------- 198
Query: 256 EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+M+ + + P+ T AS S L GK HA I+RC NI V +A++D Y K
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
+VFDQ +R+++ WT++I+ Y HG S L + +M + G +P+ VT VLT
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
AC H GLVD+ W+ F +M YGI+P + YA MV L RAG+L EA +F+ + P +
Sbjct: 319 ACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 436 KAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
WG+LL ++G+V+ + A E++P + GNY++ AN Y+ G E AS+VR++M
Sbjct: 379 PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Query: 496 EEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIY 532
E GV K G S IE+ G + F+ D S+ S++IY
Sbjct: 439 ENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIY 475
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 36/306 (11%)
Query: 48 YKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGG 107
Y K H + G + +++ L+ Y G++ A +F + RD + WN+MI G
Sbjct: 124 YTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISG 183
Query: 108 YSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
Y Q G +E +Y +M +VPD T SV +AC L G H + + I+
Sbjct: 184 YVQKGLEQEGLFIYYDMRQ-NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS 242
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
++ + +A++ MY KC S +F+++S ++ +++ S+ISG YG+ K +V + E
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG---YGYHGKVSEVLKCFE 299
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+M+ G +PN VT + ++ + G E
Sbjct: 300 ----------------------------KMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE 331
Query: 288 VHAYAIRRCY--DQNIYVATAIIDTYAKLGFIHGARQ-VFDQARSRSLVIWTAIITAYAA 344
H Y+++R Y + A++DT + G + A + V +W +++ A
Sbjct: 332 -HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 345 HGDASL 350
HG+ L
Sbjct: 391 HGNVKL 396
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 134/362 (37%), Gaps = 56/362 (15%)
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG----YMAYGFVVKARDVFRGME 227
C + K + Y RE E S+ + GS+ SG + K F+
Sbjct: 15 CLTICFKLNKLAMVYYTREFQTEASQTS--ASGSMFSGNATTILRRMLAEKRIGRFQVEN 72
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+ + + G+ + A+ L + SGL+ T A + GK
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKR 129
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGD 347
+HA + N Y+ ++ YA G + A +F + R L+ W A+I+ Y G
Sbjct: 130 IHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGL 189
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTAC-----------AH---------------SG 381
L +Y M + I PDQ T +V AC AH S
Sbjct: 190 EQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSA 249
Query: 382 LVD---------EAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
LVD + ++F+ + ++ I + ++ GK+SE K +M E
Sbjct: 250 LVDMYFKCSSFSDGHRVFDQLSTRNVI-----TWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 433 ---PSAKAWGALLNGASVYGDVETG---KFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
P+ + +L + G V+ G ++ + IEPE +Y M + AGR +
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ-HYAAMVDTLGRAGRLQ 363
Query: 487 EA 488
EA
Sbjct: 364 EA 365
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 228/459 (49%), Gaps = 38/459 (8%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ HC ++++GLE+ F +LV Y +CG I AR+VF+ + +RD V WN+++ Y G
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 113 FYEECKRLYMEMLS-VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
+E L M S D T S++ AC + G ++H + + + D+P+
Sbjct: 223 MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPV 278
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
A++ MYAK L ARE FE M ++ VS
Sbjct: 279 ATALLNMYAKSNHLSDARECFESMVVRNVVS----------------------------- 309
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
WNA+I G QN A+ L +M L+P+ +T AS + + FS + K+V A
Sbjct: 310 --WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAM 367
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
++ + VA ++I +Y++ G + A F R LV WT++I A A+HG A +
Sbjct: 368 VTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
L ++ ML +QPD++T VL+AC+H GLV E + F M Y I+ E Y C++
Sbjct: 428 LQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLID 486
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
+L RAG + EA+ ++ MP EPS A A G +++ E+ K+ L EIEP N
Sbjct: 487 LLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVN 546
Query: 472 YIIMANLYSCAGRWEEASRVRKRMEEIGVH-KIRGSSWI 509
Y I++N Y G W +A+ +RKR + K G SW+
Sbjct: 547 YSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 229/506 (45%), Gaps = 53/506 (10%)
Query: 42 SPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSW 101
S S + VK+ H F++++G+ +F++N L+ Y + E A K+FD MP R+ V+W
Sbjct: 46 SASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTW 105
Query: 102 NSMIGGYSQ----CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVH 157
N +I G Q Y+ + V D V+ + +++ C S ++ G+++H
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 158 GFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVV 217
+ + G+E +++ Y KCG +V
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCG-------------------------------LIV 194
Query: 218 KARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM--QGSGLKPNAVTLASTIPL 275
+AR VF + + L WNAL+S V N + A L++ M + + + T +S +
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
+ GK++HA + Y +I VATA+++ YAK + AR+ F+ R++V W
Sbjct: 255 ----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSW 310
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
A+I +A +G+ A+ L+ QML +QPD++T +VL++CA + E ++ M +
Sbjct: 311 NAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVT 369
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGK 455
K G + ++ SR G LSEA + EP +W +++ + +G E
Sbjct: 370 KKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESL 428
Query: 456 FACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRG-----SSWIE 510
+ + + ++ + + S G +E R KRM E +KI + I+
Sbjct: 429 QMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF--YKIEAEDEHYTCLID 486
Query: 511 MSGRLIAFI--AKDVSNERSDEIYTY 534
+ GR FI A DV N E T+
Sbjct: 487 LLGR-AGFIDEASDVLNSMPTEPSTH 511
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ ++ NG R + LF + + PD T SVL + A FS +K+ V +
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA--KFSAIWEIKQVQAMVTK 370
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+G + V N+L++ Y R G + A F + E D VSW S+IG + GF EE ++
Sbjct: 371 KGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQM 430
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE-SGIEVDLPLCNAVIAMY 179
+ ML + PD +T + V+ AC + G+ + E IE + +I +
Sbjct: 431 FESMLQ--KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLL 488
Query: 180 AKCGSLDYARELFEEM 195
+ G +D A ++ M
Sbjct: 489 GRAGFIDEASDVLNSM 504
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 253/502 (50%), Gaps = 36/502 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +S G + L LF + + FT SVLK+ K + H V +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC--KDLGCLKEGMQIHGSVEK 141
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
++ V +AL++ Y RCG++ AR FD M ERD VSWN+MI GY+ + L
Sbjct: 142 GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSL 201
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ ML+ G PD T S+++A K L + E+HG + G L +++ Y
Sbjct: 202 FQLMLTEGKK-PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCGSL A +L E ++D +S ++I+G+
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQ---------------------------- 292
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ- 299
QNN A D+ ++M K + V ++S + + + +++ G+++H +A++ +
Sbjct: 293 --QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 350
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ + ++ID YAK G I A F++ + + + WT++I Y HG+ A+ LY +M
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
I+P+ VT ++L+AC+H+G + WKI++TM +K+GI+ E +C++ +L+R+G L
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 420 SEAAKFI--SEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMAN 477
EA I E + S+ WGA L+ +G+V+ K A L +EP NYI +A+
Sbjct: 471 EEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLAS 530
Query: 478 LYSCAGRWEEASRVRKRMEEIG 499
+Y+ G W+ A RK M+E G
Sbjct: 531 VYAANGAWDNALNTRKLMKESG 552
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 49/287 (17%)
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
K L+L +HG +G +L L + +I +Y K G + +AR+LF+ +S+
Sbjct: 29 KQLLL---IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK---------- 75
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
RDV +W A+IS + + A+ L +EM +K N
Sbjct: 76 ------------RDVV---------SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQF 114
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T S + L+ G ++H + N+ V +A++ YA+ G + AR FD
Sbjct: 115 TYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSM 174
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
+ R LV W A+I Y A+ A + L+ ML G +PD T ++L A +V +
Sbjct: 175 KERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA----SIVVKCL 230
Query: 388 KIFNTMHS---KYG-------IQPLVEQYACMVGVLSRAGKLSEAAK 424
+I + +H K G I+ LV Y G L+ A KL E K
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYV-KCGSLANAWKLHEGTK 276
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 8/427 (1%)
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
+ D + V+++C + ++ H + + G L + +A Y +C AR
Sbjct: 27 LTDHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARR 86
Query: 191 L---FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
L F +S + II M G A+ V R + + TWN +I G V+N +
Sbjct: 87 LLLWFLSLSP-GVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQY 145
Query: 248 EGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
E A+ ++ M + +KPN + AS++ + +L K VH+ I + N +++A
Sbjct: 146 EEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSA 205
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
++D YAK G I +R+VF + + IW A+IT +A HG A+ A+ ++++M + PD
Sbjct: 206 LVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPD 265
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI 426
+T +LT C+H GL++E + F M ++ IQP +E Y MV +L RAG++ EA + I
Sbjct: 266 SITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Query: 427 SEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
MPIEP W +LL+ + Y + E G+ A +L SG+Y++++N+YS +WE
Sbjct: 326 ESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWE 382
Query: 487 EASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEG 546
A +VR+ M + G+ K +G SW+E G + F A D S+ + IY LEGL + +G
Sbjct: 383 SAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
Query: 547 YILQEEL 553
++ +L
Sbjct: 443 FVSDTDL 449
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N ++ + GE GLA+KV +++ ++WN MIGGY + YEE + MLS +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
P+ + S + AC + DL VH + +SGIE++ L +A++ +YAKCG + +RE
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F + D + ++I+G+ +G +A VF
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVF--------------------------- 254
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ-NIYVATAIID 309
EM+ + P+++T + S+ L GKE RR Q + A++D
Sbjct: 255 ----SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVD 310
Query: 310 TYAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
+ G + A ++ + +VIW +++++ + + L + Q L D V
Sbjct: 311 LLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG-EIAIQNLSKAKSGDYV 369
Query: 369 TLTAVLTA 376
L+ + ++
Sbjct: 370 LLSNIYSS 377
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 26 ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGL 85
I P+ F+ S L A A ++ K H ++ G+E + + +ALV Y +CG+IG
Sbjct: 161 IKPNKFSFASSLAACARLGDLHH--AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
+R+VF + D WN+MI G++ G E R++ EM V PD +T + ++ C
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM-EAEHVSPDSITFLGLLTTCS 277
Query: 146 QSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS-EKDDVSY 203
L G E G ++ I+ L A++ + + G + A EL E M E D V +
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 204 GSIISGYMAY 213
S++S Y
Sbjct: 338 RSLLSSSRTY 347
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 243/487 (49%), Gaps = 36/487 (7%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGE---IGLARKVFDGMPERDTVSWNSMIGG 107
+++AH F+L+ GL D F + LV E + A + + + + + NS+I
Sbjct: 55 IQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 108 YSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
Y+ E ++ EML +G V PD + V++AC G ++HG +SG+
Sbjct: 115 YANSSTPEVALTVFREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
D+ + N ++ +Y + G + AR++ + M +D VS+ S++S Y+ G V +AR +F ME
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 228 NPGLDTWNALISG---------------------------MVQNNWFEGAIDLVRE---- 256
+++WN +ISG MV G + V E
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 257 -MQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG 315
+ S KP+ TL S + + +L G+ VH Y + + ++ATA++D Y+K G
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 316 FIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
I A +VF R + W +II+ + HG AL ++++M+ G +P+ +T VL+
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSA 435
AC H G++D+A K+F M S Y ++P +E Y CMV +L R GK+ EA + ++E+P + ++
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 436 KAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
+LL +G +E + + L E+ S Y M+NLY+ GRWE+ R+ M
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Query: 496 EEIGVHK 502
V++
Sbjct: 534 RAERVNR 540
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGI-SPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFV 58
M+ AY+ G Y +L++F +D PD FT+ SVL A AS S S + V H ++
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV---HVYI 330
Query: 59 LRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECK 118
+ G+E + F+ ALV Y +CG+I A +VF +RD +WNS+I S G ++
Sbjct: 331 DKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDAL 390
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
++ EM+ G P+G+T + V+ AC
Sbjct: 391 EIFSEMVYEG-FKPNGITFIGVLSACNH-------------------------------- 417
Query: 179 YAKCGSLDYARELFEEMS 196
G LD AR+LFE MS
Sbjct: 418 ---VGMLDQARKLFEMMS 432
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 269/542 (49%), Gaps = 56/542 (10%)
Query: 20 SSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCR 79
SS+ + P+ FT++SVL + Y+P K+ H L+ GL I+V NA+++ Y R
Sbjct: 151 SSMLSHCFPNEFTLSSVLTSCR------YEPGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 80 CGEIGLARK---VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
C + A + VF+ + ++ V+WNSMI + C ++ ++M M S G V D T
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG-VGFDRAT 263
Query: 137 IVSVMQACGQSKDLVLG------MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR- 189
++++ + +S DLV +++H +SG+ + A+I +Y++ DY
Sbjct: 264 LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLE-DYTDC 322
Query: 190 -ELFEEMSE-KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
+LF EMS +D V++ II+ + Y +P
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVY--------------DP------------------ 350
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E AI L +++ L P+ T +S + + R +HA I+ + + + ++
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
I YAK G + +VFD SR +V W +++ AY+ HG L ++ +M I PD
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDS 467
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
T A+L+AC+H+G V+E +IF +M K P + YAC++ +LSRA + +EA + I
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE-IEPESSGNYIIMANLYSCAGRWE 486
+MP++P A W ALL +G+ GK A D L E +EP +S +YI M+N+Y+ G +
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 487 EASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEG 546
EA+ K ME V K SW E+ ++ F + + +Y L+ L ++E G
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMG 647
Query: 547 YI 548
Y+
Sbjct: 648 YV 649
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 210/473 (44%), Gaps = 81/473 (17%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
++ + N L+ Y +CG I AR+VFD MPER+ VSW ++I GY Q G +E L+ ML
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC--G 183
S P+ T+ SV+ +C G +VHG + G+ + + NAVI+MY +C G
Sbjct: 155 S--HCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 184 SLDY-ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
+ Y A +FE + K+ V++ S+I+ + KA VF M + G+ A + +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+ + + S L PN V+ + ++H+ ++
Sbjct: 269 SSLY-----------KSSDLVPNEVS--------------KCCLQLHSLTVKSGLVTQTE 303
Query: 303 VATAIIDTYAKL--GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD 360
VATA+I Y+++ + + + + R +V W IITA+A + D A+ L+ Q+
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQ 362
Query: 361 SGIQPDQVTLTAVLTAC-----------------------------------AHSGLVDE 385
+ PD T ++VL AC A G +D
Sbjct: 363 EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDL 422
Query: 386 AWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGA 445
++F+ M S+ V + M+ S G++ +M I P + + ALL+
Sbjct: 423 CMRVFDDMDSRD-----VVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSAC 477
Query: 446 SVYGDVETGKFACDHLFEIEPES---SGNYIIMANLYSCAGRWEEASRVRKRM 495
S G VE G +FE +PE+ +Y + ++ S A R+ EA V K+M
Sbjct: 478 SHAGRVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+ LF +SPD +T +SVLKA A + H V++ G D + N+L+
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACA--GLVTARHALSIHAQVIKGGFLADTVLNNSLI 411
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +CG + L +VFD M RD VSWNSM+ YS G + ++ +M + PD
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDS 467
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN---AVIAMYAKCGSLDYAREL 191
T ++++ AC + + G+ + + E LP N VI M ++ A E+
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEK--PETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 192 FEEMSEKDD 200
++M D
Sbjct: 526 IKQMPMDPD 534
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 281 NLRGGKEVHAYAIRR--CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI 338
NL G +H + + CY QN+ +A +I+ YAK G I ARQVFD R++V WTA+
Sbjct: 74 NLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTAL 133
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTAC 377
IT Y G+ L++ ML S P++ TL++VLT+C
Sbjct: 134 ITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSC 171
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 252/515 (48%), Gaps = 49/515 (9%)
Query: 51 VKEAHCFVLRRGLETD---IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGG 107
+K+ H F LR + +F+ ++ ++ A +VFD + + WN++I
Sbjct: 64 LKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA 123
Query: 108 YSQ-CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
+ EE LY +ML G PD T V++AC G +VH + + G
Sbjct: 124 CAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG 183
Query: 167 VDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM 226
D+ + N +I +Y CG LD AR++F+EM E+
Sbjct: 184 GDVYVNNGLIHLYGSCGCLDLARKVFDEMPER---------------------------- 215
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
L +WN++I +V+ ++ A+ L REMQ S +P+ T+ S + + +L G
Sbjct: 216 ---SLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 287 EVHAYAIRRC---YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
HA+ +R+C ++ V ++I+ Y K G + A QVF + R L W A+I +A
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA 331
Query: 344 AHGDASLALGLYAQMLDS--GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
HG A A+ + +M+D ++P+ VT +L AC H G V++ + F+ M Y I+P
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 391
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLN-----GASVYGDVETGKF 456
+E Y C+V +++RAG ++EA + MP++P A W +LL+ GASV E +
Sbjct: 392 ALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARN 451
Query: 457 ACDHLFEIEPES---SGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSG 513
+ E + SG Y++++ +Y+ A RW + VRK M E G+ K G S IE++G
Sbjct: 452 IIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEING 511
Query: 514 RLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGYI 548
F A D S+ ++ +IY L+ + +R GY+
Sbjct: 512 ISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYL 546
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 44/342 (12%)
Query: 10 LYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFV 69
LYR +L+ SS PD T VLKA A + K+ HC +++ G D++V
Sbjct: 137 LYRKMLERGESS------PDKHTFPFVLKACAY--IFGFSEGKQVHCQIVKHGFGGDVYV 188
Query: 70 ENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
N L+ Y CG + LARKVFD MPER VSWNSMI + G Y+ +L+ EM S
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--S 246
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFV---NESGIEVDLPLCNAVIAMYAKCGSLD 186
PDG T+ SV+ AC L LG H F+ + + +D+ + N++I MY KCGSL
Sbjct: 247 FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLR 306
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
A ++F+ M ++D S+ ++I G+ +G +A N+
Sbjct: 307 MAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM------------------------NF 342
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR-CYDQNIYVAT 305
F+ +D + ++PN+VT + ++ + G++ +R C + +
Sbjct: 343 FDRMVD-----KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 306 AIIDTYAKLGFIHGA-RQVFDQARSRSLVIWTAIITAYAAHG 346
I+D A+ G+I A V VIW +++ A G
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIA---SPSFSYYKPVKEAHCFVLRR---G 62
G Y L LF + PD +T+ SVL A A S S + AH F+LR+
Sbjct: 231 GEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTW-----AHAFLLRKCDVD 284
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
+ D+ V+N+L+ YC+CG + +A +VF GM +RD SWN+MI G++ G EE +
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 123 EMLSVG-SVVPDGVTIVSVMQACGQSKDLVLGMEVHG-FVNESGIEVDLPLCNAVIAMYA 180
M+ +V P+ VT V ++ AC + G + V + IE L ++ + A
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 181 KCGSLDYARELFEEMSEKDD 200
+ G + A ++ M K D
Sbjct: 405 RAGYITEAIDMVMSMPMKPD 424
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 237/478 (49%), Gaps = 35/478 (7%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N++V Y + G++ A K+F MP ++ +SW +MI G Q E L+ ML +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC-CI 221
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V+ AC + +G++VHG + + G + + ++I YA C + +R+
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRK 281
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F+E + + W AL+SG N E A
Sbjct: 282 VFDEKVHEQ-------------------------------VAVWTALLSGYSLNKKHEDA 310
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+ + M + + PN T AS + S L GKE+H A++ + + +V +++
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
Y+ G ++ A VF + +S+V W +II A HG A ++ QM+ +PD++T
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYG-IQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
T +L+AC+H G +++ K+F M S I ++ Y CMV +L R GKL EA + I M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEAS 489
++P+ W ALL+ ++ DV+ G+ A +F ++ +SS Y++++N+Y+ AGRW S
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Query: 490 RVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
++R +M++ G+ K GSSW+ + G+ F + D IY LE L ++E GY
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGY 606
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 176/388 (45%), Gaps = 51/388 (13%)
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
++T Y R + A +FD MP RD VSWNSMI G +CG +L+ EM P
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-------P 124
Query: 133 DG--VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
+ V+ +++ C +S G +D A
Sbjct: 125 ERSVVSWTAMVNGCFRS-----------------------------------GKVDQAER 149
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
LF +M KD ++ S++ GY+ +G V A +F+ M + +W +I G+ QN A
Sbjct: 150 LFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEA 209
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+DL + M +K + I + G +VH I+ + YV+ ++I
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
YA I +R+VFD+ + +WTA+++ Y+ + AL +++ ML + I P+Q T
Sbjct: 270 YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
Query: 371 TAVLTACAHSGLVDEAW-KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
+ L +C+ G +D W K + + K G++ +V + S +G +++A ++
Sbjct: 330 ASGLNSCSALGTLD--WGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFA 457
+ S +W +++ G + +G GK+A
Sbjct: 388 -FKKSIVSWNSIIVGCAQHG---RGKWA 411
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
LDLF + + I S T V+ A A+ P+F V H +++ G + +V +L
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV---HGLIIKLGFLYEEYVSASL 266
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
+T Y C IG +RKVFD W +++ GYS +E+ ++ ML S++P+
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR-NSILPN 325
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
T S + +C L G E+HG + G+E D + N+++ MY+ G+++ A +F
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
++ +K VS+ SII G +G RG W +I G + I L
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHG---------RG-------KWAFVIFGQM--------IRL 421
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR--RCYDQNIYVATAIIDTY 311
+E P+ +T + S+ L G+++ Y D+ I T ++D
Sbjct: 422 NKE-------PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 312 AKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGD 347
+ G + A ++ ++ + + ++W A+++A H D
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L YS N + L +F+ + I P+ T S L + ++ KE H ++
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA--LGTLDWGKEMHGVAVK 354
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLETD FV N+LV Y G + A VF + ++ VSWNS+I G +Q G + +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN--AVIAM 178
+ +M+ + PD +T ++ AC L G ++ +++ +D + + ++ +
Sbjct: 415 FGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 179 YAKCGSLDYARELFEEMSEKDD 200
+CG L A EL E M K +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPN 495
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 27/286 (9%)
Query: 168 DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
++ +CN +++ +D ARE+F ++ Y +I+GY +V A ++F M
Sbjct: 39 EVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP 93
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+ +WN++ISG V+ A+ L EM P ++ T + F R GK
Sbjct: 94 VRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCF---RSGKV 144
Query: 288 VHAYAIRRCYDQNIYVATA----IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
A R + Q TA ++ Y + G + A ++F Q ++++ WT +I
Sbjct: 145 DQA---ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLV 403
+ + AL L+ ML I+ T V+TACA++ ++ + K G L
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI-IKLGF--LY 258
Query: 404 EQY--ACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
E+Y A ++ + ++ ++ K E + W ALL+G S+
Sbjct: 259 EEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSL 303
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 239/473 (50%), Gaps = 4/473 (0%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPE-RDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
D NA++ YCR G+I A VF PE DT+SWN++I GY+Q G+ EE ++ + M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
G + D + +V+ K L +G EVH V ++G + + + ++ +Y KCG+
Sbjct: 252 EENG-LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 185 LDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQN 244
+ YA + S S+I GY + G +V+A+ +F + L W A+ G +
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 245 NWFEGAIDLVREMQGSGLK-PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
+ ++L R + P+++ + S + S + + GKE+H +++R + +
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
TA +D Y+K G + A ++FD + R V++ A+I A HG + + + M + G
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAA 423
+PD++T A+L+AC H GLV E K F +M Y I P Y CM+ + +A +L +A
Sbjct: 491 KPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAI 550
Query: 424 KFISEM-PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCA 482
+ + + +E A GA LN S + E K + L IE + YI +AN Y+ +
Sbjct: 551 ELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASS 610
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYL 535
GRW+E R+R +M + G SW + + F + D+S+ ++ IY L
Sbjct: 611 GRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 247/549 (44%), Gaps = 93/549 (16%)
Query: 35 SVLKAIASPS----FSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVF 90
S L A++S +S ++EA V LE +++ NA++ Y + + AR++F
Sbjct: 19 STLTAVSSNQLVNLYSKSGLLREARN-VFDEMLERNVYSWNAVIAAYVKFNNVKEARELF 77
Query: 91 DGMP-ERDTVSWNSMIGGYSQC-GFYEECKRLYMEM--LSVGSVVPDGVTIVSVMQACGQ 146
+ ERD +++N+++ G+++ G E ++ EM + D T+ ++++ +
Sbjct: 78 ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAK 137
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK--DDVSYG 204
++ G ++HG + ++G + +++I MY+KCG +F + D V+
Sbjct: 138 LTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARN 197
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLD---TWNALISGMVQNNWFEGAIDLVREMQGSG 261
++I+ Y G + KA VF NP L+ +WN LI+G QN + E A+ + M+ +G
Sbjct: 198 AMIAAYCREGDIDKALSVF--WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 262 LKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLG------ 315
LK + + + + + S +L+ GKEVHA ++ N +V++ I+D Y K G
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 316 ---FIHG----------------------ARQVFDQARSRSLVIWTAIITAYAA--HGDA 348
++G A+++FD ++LV+WTA+ Y D+
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS-KYGIQPLVEQYA 407
L L A + + PD + + +VL AC+ ++ +I HS + GI +
Sbjct: 376 VLELA-RAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHG--HSLRTGILMDKKLVT 432
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG----------DVETGKF- 456
V + S+ G + E A+ I + E + A++ G + +G D+ G F
Sbjct: 433 AFVDMYSKCGNV-EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 457 -----------ACDH----------------LFEIEPESSGNYIIMANLYSCAGRWEEAS 489
AC H + I PE +G+Y M +LY A R ++A
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE-TGHYTCMIDLYGKAYRLDKAI 550
Query: 490 RVRKRMEEI 498
+ + ++++
Sbjct: 551 ELMEGIDQV 559
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 37/275 (13%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y+ NG L + S + G+ D + +VL ++S K KE H VL+
Sbjct: 231 LIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSS--LKSLKIGKEVHARVLK 288
Query: 61 RGLETDIFVENALVTCYCRCGEIGL-------------------------------ARKV 89
G ++ FV + +V YC+CG + A+++
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 90 FDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKD 149
FD + E++ V W +M GY + L ++ + PD + +VSV+ AC
Sbjct: 349 FDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAY 408
Query: 150 LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISG 209
+ G E+HG +GI +D L A + MY+KCG+++YA +F+ E+D V Y ++I+G
Sbjct: 409 MEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAG 468
Query: 210 YMAYGFVVKARDVFRGMENPGLD----TWNALISG 240
+G K+ F M G T+ AL+S
Sbjct: 469 CAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 27 SPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLA 86
+PDS + SVL A + + Y +P KE H LR G+ D + A V Y +CG + A
Sbjct: 390 TPDSLVMVSVLGACSLQA--YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 87 RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
++FD ERDTV +N+MI G + G +E + E ++ G PD +T ++++ AC +
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHG-HEAKSFQHFEDMTEGGFKPDEITFMALLSAC-R 505
Query: 147 SKDLVLGMEVH--GFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE--EMSEKDDVS 202
+ LVL E + + I + +I +Y K LD A EL E + EKD V
Sbjct: 506 HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Query: 203 YGSIISG 209
G+ ++
Sbjct: 566 LGAFLNA 572
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARD 221
+SG + N ++ +Y+K G L AR +F+EM E++ S+ ++I+ Y+ + V +AR+
Sbjct: 16 KSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARE 75
Query: 222 VFRGME-NPGLDTWNALISGMVQNNWFEG-AIDLVREM---QGSGLKPNAVTLASTIPLF 276
+F L T+N L+SG + + E AI++ EM + + + T+ + + L
Sbjct: 76 LFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLS 135
Query: 277 SYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL--VI 334
+ +N+ G+++H ++ D + +++I Y+K G +F+ + + V
Sbjct: 136 AKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVA 195
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH 394
A+I AY GD AL ++ + + D ++ ++ A +G +EA K+ +M
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPE---LNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 395 SKYGIQPLVEQYACMVGVLSRAGKL 419
G++ + ++ VLS L
Sbjct: 253 EN-GLKWDEHSFGAVLNVLSSLKSL 276
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 264/535 (49%), Gaps = 44/535 (8%)
Query: 15 LDLFASSV-DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE-TDIFVENA 72
L LF V +A PD TVTSVLKA + H F +RRG + D+FV N+
Sbjct: 210 LKLFKEMVHEAKTEPDCVTVTSVLKACTV--MEDIDVGRSVHGFSIRRGFDLADVFVCNS 267
Query: 73 LVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
L+ Y + ++ A +VFD R+ VSWNS++ G+ Y+E ++ M+ +V
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ-EAVEV 326
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D VT+VS+++ C + + +HG + G E + +++I Y C +D A +
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
+ M+ KD VS ++ISG G +A +F M +
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----------------------- 423
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN-IYVATAIIDTY 311
PNA+T+ S + S ++LR K H AIRR N I V T+I+D Y
Sbjct: 424 -----------PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 312 AKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLT 371
AK G I AR+ FDQ ++++ WT II+AYA +G AL L+ +M G P+ VT
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP- 430
A L+AC H GLV + IF +M + +P ++ Y+C+V +LSRAG++ A + I +P
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591
Query: 431 -IEPSAKAWGALLNGA-SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEA 488
++ A AWGA+L+G + + + + E+EP S Y++ ++ ++ WE+
Sbjct: 592 DVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDV 651
Query: 489 SRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMR 543
+ +R+ ++E V + G S + F+A D ++ E+ ++ L M+
Sbjct: 652 AMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 101/491 (20%)
Query: 6 SFNGLYRHLLDLFASSVDAGIS-PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
S +G +R ++ ++ AG+ D F V KA A S+
Sbjct: 20 SVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSW------------------- 60
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
+F N++ Y +CG++ + FD M RD+VSWN ++ G GF EE +
Sbjct: 61 --LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEE-GLWWFSK 117
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVL-GMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
L V P+ T+V V+ AC + L G ++HG+V SG + N+++ MYA
Sbjct: 118 LRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
SL AR+LF+EMSE+D +S+ +I Y V++++ G++
Sbjct: 175 SLS-ARKLFDEMSERDVISWSVVIRSY------VQSKEPVVGLK---------------- 211
Query: 244 NNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-QNI 301
L +EM + +P+ VT+ S + + ++ G+ VH ++IRR +D ++
Sbjct: 212 ---------LFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
+V ++ID Y+K + A +VFD+ R++V W +I+ + + AL ++ M+
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 362 GIQPDQVTLTAVLTAC-----------------------------------AHSGLVDEA 386
++ D+VT+ ++L C LVD+A
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 387 WKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGAS 446
+ ++M K V + M+ L+ AG+ EA M P+A +LLN S
Sbjct: 383 GTVLDSMTYKD-----VVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACS 437
Query: 447 VYGDVETGKFA 457
V D+ T K+A
Sbjct: 438 VSADLRTSKWA 448
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 7/231 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L + N Y L++F V + D TV S+L+ F P K H ++R
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV--CKFFEQPLPCKSIHGVIIR 356
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
RG E++ ++L+ Y C + A V D M +D VS ++MI G + G +E +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV-DLPLCNAVIAMY 179
+ M P+ +T++S++ AC S DL HG + + D+ + +++ Y
Sbjct: 417 FCHMRDT----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
AKCG+++ AR F++++EK+ +S+ IIS Y G KA +F M+ G
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 261/519 (50%), Gaps = 42/519 (8%)
Query: 25 GISPDSFTVTSVLK---AIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
G+ P++FT +++L A+ S F K+ H ++ G E V NALV Y +C
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFG-----KQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374
Query: 82 EIGL-ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
+ A +VF M + VSW ++I G GF ++C L MEM+ V P+ VT+ V
Sbjct: 375 ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK-REVEPNVVTLSGV 433
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
++AC + + + +E+H ++ ++ ++ + N+++ YA +DYA + M +D+
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
++Y S+++ + G E A+ ++ M G
Sbjct: 494 ITYTSLVTRFNELG-------------------------------KHEMALSVINYMYGD 522
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
G++ + ++L I + L GK +H Y+++ + V +++D Y+K G + A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
++VF++ + +V W +++ A++G S AL + +M +PD VT +L+AC++
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
L D + F M Y I+P VE Y +VG+L RAG+L EA + M ++P+A +
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 441 LLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
LL G++ G+ + + P YI++A+LY +G+ E A + R M E +
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 501 HKIRGSSWIEMSGRLIAFIAKDVSN-ERSDEIYTYLEGL 538
K G S +E+ G++ +F+++DV+ ++++ IY +E +
Sbjct: 763 SKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESI 801
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 216/469 (46%), Gaps = 40/469 (8%)
Query: 11 YRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVE 70
+R L ++ V AG+ P+ FT +L A + + K + H ++ RG+ ++ ++
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTI---HSNIIVRGIPLNVVLK 262
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+LV Y + ++ A +V + E+D W S++ G+ + +E ++EM S+G +
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-L 321
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY-AR 189
P+ T +++ C + L G ++H + G E + NA++ MY KC + + A
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 190 ELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEG 249
+F M + VS+ ++I G + +GFV +D F
Sbjct: 382 RVFGAMVSPNVVSWTTLILGLVDHGFV---QDCF-------------------------- 412
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
L+ EM ++PN VTL+ + S ++R E+HAY +RR D + V +++D
Sbjct: 413 --GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
YA + A V + R + +T+++T + G +AL + M GI+ DQ++
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
L ++A A+ G + E K + K G +V + S+ G L +A K E+
Sbjct: 531 LPGFISASANLGAL-ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Query: 430 PIEPSAKAWGALLNGASVYGDVETGKFACDHLF--EIEPESSGNYIIMA 476
P +W L++G + G + + A + + E EP+S I+++
Sbjct: 590 AT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 212/459 (46%), Gaps = 58/459 (12%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
HC V++ GL ++ + N L++ Y + I ARK+FD M R +W MI +++ +
Sbjct: 46 HCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEF 105
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
L+ EM++ G+ P+ T SV+++C +D+ G VHG V ++G E + + ++
Sbjct: 106 ASALSLFEEMMASGTH-PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
+ +Y+KCG A ELF + D +S W
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTIS-------------------------------W 193
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
+IS +V + A+ EM +G+ PN T + S F L GK +H+ I
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIV 252
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGL 354
R N+ + T+++D Y++ + A +V + + + + +WT++++ + + A A+G
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ +M G+QP+ T +A+L+ C+ +D +I ++ K G + + +V +
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI-HSQTIKVGFEDSTDVGNALVDMYM 371
Query: 415 R-AGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLF------EIEPE 467
+ + EA++ M + P+ +W L+ G +G V+ C L E+EP
Sbjct: 372 KCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQD----CFGLLMEMVKREVEP- 425
Query: 468 SSGNYIIMANLYSCAGRWEEASRVR--KRMEEIGVHKIR 504
N+ + +G S++R +R+ EI + +R
Sbjct: 426 ---------NVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
+G + L V + P+ T++ VL+A + + + V E H ++LRR ++ ++
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK--LRHVRRVLEIHAYLLRRHVDGEM 462
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
V N+LV Y ++ A V M RD +++ S++ +++ G +E + M
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G + D +++ + A L G +H + +SG + N+++ MY+KCGSL+
Sbjct: 523 G-IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME 227
A+++FEE++ D VS+ ++SG + GF+ A F M
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 7 FNGLYRH--LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLE 64
FN L +H L + GI D ++ + A S + + K HC+ ++ G
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA--SANLGALETGKHLHCYSVKSGFS 560
Query: 65 TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEM 124
V N+LV Y +CG + A+KVF+ + D VSWN ++ G + GF + EM
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE-SGIEVDLPLCNAVIAMYAKCG 183
+ PD VT + ++ AC + LG+E + + IE + ++ + + G
Sbjct: 621 -RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 184 SLDYARELFEEMSEKDD 200
L+ A + E M K +
Sbjct: 680 RLEEATGVVETMHLKPN 696
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAY 342
R G +H I+ +N+ + ++ Y K I AR++FD+ R++ WT +I+A+
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA------------------------ 378
+ + AL L+ +M+ SG P++ T ++V+ +CA
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 379 -----------HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
G EA ++F+++ + I + M+ L A K EA +F S
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTI-----SWTMMISSLVGARKWREALQFYS 214
Query: 428 EMP---IEPSAKAWGALLNGASVYGDVETGK 455
EM + P+ + LL GAS + +E GK
Sbjct: 215 EMVKAGVPPNEFTFVKLL-GASSFLGLEFGK 244
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/481 (30%), Positives = 245/481 (50%), Gaps = 40/481 (8%)
Query: 46 SYYKPVKEAHCFVLRRGLETDIFVENALV--TCYCRCGEIGLARKVFDGMPERDTVSWNS 103
S K + + H + L+ D F+ + LV + ++ AR + + +WN
Sbjct: 24 SSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNM 83
Query: 104 MIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES 163
+ GYS E +Y EM G + P+ +T +++AC L G ++ V +
Sbjct: 84 LSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 164 GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVF 223
G + D+ + N +I +Y C AR++F+EM+E++ VS
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS--------------------- 181
Query: 224 RGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
WN++++ +V+N + EM G P+ T+ + L + NL
Sbjct: 182 ----------WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTM--VVLLSACGGNLS 229
Query: 284 GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
GK VH+ + R + N + TA++D YAK G + AR VF++ +++ W+A+I A
Sbjct: 230 LGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLA 289
Query: 344 AHGDASLALGLYAQML-DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPL 402
+G A AL L+++M+ +S ++P+ VT VL AC+H+GLVD+ +K F+ M + I+P+
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 403 VEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE---TGKFACD 459
+ Y MV +L RAG+L+EA FI +MP EP A W LL+ S++ D + G+
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKK 409
Query: 460 HLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFI 519
L E+EP+ SGN +I+AN ++ A W EA+ VR+ M+E + KI G S +E+ G F
Sbjct: 410 RLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFF 469
Query: 520 A 520
+
Sbjct: 470 S 470
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 39/326 (11%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
GI P+ T +LKA AS F ++ VL+ G + D++V N L+ Y C +
Sbjct: 108 GIKPNKLTFPFLLKACAS--FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTS 165
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
ARKVFD M ER+ VSWNS++ + G + EM+ PD T+V ++ AC
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG-KRFCPDETTMVVLLSAC 224
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYG 204
G +L LG VH V +E++ L A++ MYAK G L+YAR +FE M +K+ ++
Sbjct: 225 GG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWS 282
Query: 205 SIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
++I G YGF +A +F M M+ S ++P
Sbjct: 283 AMIVGLAQYGFAEEALQLFSKM------------------------------MKESSVRP 312
Query: 265 NAVTLASTIPLFSYFSNLRGG-KEVHAY-AIRRCYDQNIYVATAIIDTYAKLGFIHGARQ 322
N VT + S+ + G K H I + I+ A++D + G ++ A
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG-AMVDILGRAGRLNEAYD 371
Query: 323 VFDQAR-SRSLVIWTAIITAYAAHGD 347
+ V+W +++A + H D
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHD 397
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
NG + + F + PD T+ +L A + S K V H V+ R LE +
Sbjct: 192 NGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG-NLSLGKLV---HSQVMVRELELNC 247
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ ALV Y + G + AR VF+ M +++ +W++MI G +Q GF EE +L+ +M+
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
SV P+ VT + V+ AC + + G + H I+ + A++ + + G L+
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 187 YARELFEEMS-EKDDVSYGSIISG 209
A + ++M E D V + +++S
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSA 391
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 238/461 (51%), Gaps = 3/461 (0%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
+ E H +LR L + ++ A +VF + + + +N+MI YS
Sbjct: 20 LPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL 79
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
G E + M S G + D T ++++C DL G VHG + +G
Sbjct: 80 VGPPLESLSFFSSMKSRG-IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+ V+ +Y G + A+++F+EMSE++ V + +I G+ G V + +F+ M
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
+ +WN++IS + + A++L EM G P+ T+ + +P+ + L GK +H+
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 291 YAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
A + I V A++D Y K G + A +F + + R++V W +I+ A +G
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 350 LALGLYAQMLDSG-IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
+ L+ M++ G + P++ T VL C+++G V+ ++F M ++ ++ E Y
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPES 468
MV ++SR+G+++EA KF+ MP+ +A WG+LL+ +GDV+ + A L +IEP +
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 469 SGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
SGNY++++NLY+ GRW++ +VR M++ + K G S I
Sbjct: 439 SGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 157/385 (40%), Gaps = 67/385 (17%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ YS G L F+S GI D +T +LK+ +S S + K H ++R
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS--LSDLRFGKCVHGELIR 130
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDT---------------------- 98
G + +V Y G +G A+KVFD M ER+
Sbjct: 131 TGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHL 190
Query: 99 ---------VSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKD 149
VSWNSMI S+CG E L+ EM+ G PD T+V+V+
Sbjct: 191 FKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG-FDPDEATVVTVLPISASLGV 249
Query: 150 LVLGMEVHGFVNESGIEVD-LPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
L G +H SG+ D + + NA++ Y K G L+ A +F +M ++ VS+ ++IS
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
G G G+D ++A+I EG + PN T
Sbjct: 310 G-----------SAVNGKGEFGIDLFDAMIE--------EGKV-----------APNEAT 339
Query: 269 LASTIPLFSYFSNLRGGKEVHAYAIRRC-YDQNIYVATAIIDTYAKLGFIHGARQVF-DQ 326
+ SY + G+E+ + R + A++D ++ G I A + +
Sbjct: 340 FLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Query: 327 ARSRSLVIWTAIITAYAAHGDASLA 351
+ + +W ++++A +HGD LA
Sbjct: 400 PVNANAAMWGSLLSACRSHGDVKLA 424
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 253/506 (50%), Gaps = 37/506 (7%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL-RRGLETD 66
+GL + L G P S V S+L A+ + S K + H VL ++
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLL-ALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
+ + ALV Y + + A VFD M ++ VSW +MI G YE L+ M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM-Q 243
Query: 127 VGSVVPDGVTIVSVMQACGQ-SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
++ P+ VT++SV+ AC + + L E+HGF G D L A + MY +CG++
Sbjct: 244 RENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNV 303
Query: 186 DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
+R LFE K RDV W+++ISG +
Sbjct: 304 SLSRVLFE----------------------TSKVRDVV---------MWSSMISGYAETG 332
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
++L+ +M+ G++ N+VTL + + + + L VH+ ++ + +I +
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
A+ID YAK G + AR+VF + + LV W+++I AY HG S AL ++ M+ G +
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 366 DQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
D + A+L+AC H+GLV+EA IF T KY + +E YAC + +L R GK+ +A +
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 426 ISEMPIEPSAKAWGALLNGASVYGDVET-GKFACDHLFEIEPESSGNYIIMANLYSCAGR 484
MP++PSA+ W +LL+ +G ++ GK + L + EP++ NY++++ +++ +G
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGN 571
Query: 485 WEEASRVRKRMEEIGVHKIRGSSWIE 510
+ A VR+ M+ ++K G S IE
Sbjct: 572 YHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 192/406 (47%), Gaps = 49/406 (12%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+ HC L+ G + D V N+L++ Y + RKVFD M RDTVS+ S+I Q G
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC---GQSKDLVLGMEVHGFVNESGIEVDL 169
E +L EM G +P + S++ C G S + V+E E L
Sbjct: 128 LLYEAMKLIKEMYFYG-FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVL 186
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
L A++ MY K A +F++M K++VS
Sbjct: 187 -LSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS--------------------------- 218
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL---FSYFSNLRGGK 286
W A+ISG V N +E +DL R MQ L+PN VTL S +P +Y S+L K
Sbjct: 219 ----WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--K 272
Query: 287 EVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
E+H ++ R + + A + Y + G + +R +F+ ++ R +V+W+++I+ YA G
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLV 403
D S + L QM GI+ + VTL A+++AC +S L+ A +T+HS K G +
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA----STVHSQILKCGFMSHI 388
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYG 449
++ + ++ G LS A + E+ E +W +++N ++G
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHG 433
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 92 GMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIV--SVMQACG-QSK 148
+ R + + + G FY+E RLY L + S+ +G T + SV++AC Q +
Sbjct: 4 ALSSRLNLELGNKLKGLVSDQFYDEALRLYK--LKIHSLGTNGFTAILPSVIKACAFQQE 61
Query: 149 DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
+LG ++H ++G + D + N++I+MYAK R++F+EM +D VSY SI
Sbjct: 62 PFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSI-- 119
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
I+ Q+ A+ L++EM G P +
Sbjct: 120 -----------------------------INSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 269 LASTIPLFSYF-SNLRGGKEVHAYA-IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+AS + L + S+ + + HA + +++ ++TA++D Y K A VFDQ
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 210
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAH----SGL 382
++ V WTA+I+ A+ + + + L+ M ++P++VTL +VL AC S L
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL 270
Query: 383 VDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALL 442
V E F+ H + + L + M R G +S ++ + E W +++
Sbjct: 271 VKEIHG-FSFRHGCHADERLTAAFMTMY---CRCGNVS-LSRVLFETSKVRDVVMWSSMI 325
Query: 443 NGASVYGD 450
+G + GD
Sbjct: 326 SGYAETGD 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y+ G +++L GI +S T+ +++ A + + + H +L+
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST--VHSQILK 381
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + I + NAL+ Y +CG + AR+VF + E+D VSW+SMI Y G E +
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEI 441
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ M+ G V D + ++++ AC + + + + + V L I +
Sbjct: 442 FKGMIKGGHEVDD-MAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLG 500
Query: 181 KCGSLDYARELFEEMSEKDDVS-YGSIISGYMAYG 214
+ G +D A E+ M K + S++S +G
Sbjct: 501 RFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 260/533 (48%), Gaps = 41/533 (7%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L F + + +G+ P FT + VL + Y K H ++ D+ ++NAL+
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSK--LGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
YC CG++ A VF + + VSWNS+I G S+ GF E+ +Y +L + + PD
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T + + A + + V G +HG V + G E + + +++MY K + A+++F+
Sbjct: 403 YTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDV 462
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
M E+D V + +I G+ G A F I++
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFF---------------------------IEMY 495
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
RE + + +L+S I S + LR G+ H AIR +D + V A++D Y K
Sbjct: 496 REKN----RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
G A +F A + L W +++ AY+ HG AL + Q+L++G PD VT ++L
Sbjct: 552 GKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLL 611
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI-EP 433
AC+H G + ++N M + GI+ + Y+CMV ++S+AG + EA + I + P
Sbjct: 612 AACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNN 670
Query: 434 SAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRK 493
A+ W LL+ +++ G +A + + +++PE + +I+++NLY+ GRWE+ + +R+
Sbjct: 671 QAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Query: 494 RMEEIGVHKIRGSSWIEMSGRLI-AFIAKDVSN-----ERSDEIYTYLEGLFC 540
++ + K G SWIE++ F + D SN + DE+ + C
Sbjct: 731 KIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNMLC 783
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 44 SFSYYKPVKEAHCFVLRRGL---ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVS 100
S + K ++ H VL G + N L++ Y RCG + ARKVFD MP R+ VS
Sbjct: 106 SITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVS 165
Query: 101 WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV 160
+N++ YS+ + ++ V P+ T S++Q C +D+++G ++ +
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 161 NESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKAR 220
+ G ++ + +V+ MY+ CG L+ AR +F+ ++ +D V++
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW----------------- 268
Query: 221 DVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
N +I G ++N+ E + R M SG+ P T + + S
Sbjct: 269 --------------NTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
+ GK +HA I ++ + A++D Y G + A VF + + +LV W +II+
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 341 AYAAHGDASLALGLYAQMLD-SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGI 399
+ +G A+ +Y ++L S +PD+ T +A ++A A K+ + +K G
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLHGQVTKLGY 433
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVE 452
+ V ++ + + + +E+A+ + ++ E W ++ G S G+ E
Sbjct: 434 ERSVFVGTTLLSMYFK-NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSE 485
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 178/430 (41%), Gaps = 54/430 (12%)
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ N L++ Y RC + ARKVFD MP+R+ V+ + G + + L+ +++ +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVT---LFGLSAVFEYVSMGSSLHSQIIKL 79
Query: 128 GSV-----VP---DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI--EVDLPLCNA-VI 176
GS +P ++V + + C L ++H V +G + P N +I
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
+MY +CGSL+ +AR VF M + + ++NA
Sbjct: 140 SMYVRCGSLE-------------------------------QARKVFDKMPHRNVVSYNA 168
Query: 237 LISGMVQNNWFEG-AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
L S +N F A L M +KPN+ T S + + + ++ G +++ I+
Sbjct: 169 LYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL 228
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLY 355
Y N+ V T+++ Y+ G + AR++FD +R V W +I + L +
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288
Query: 356 AQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA---CMVGV 412
ML SG+ P Q T + VL C+ G ++ + +H++ + + ++ +
Sbjct: 289 RNMLMSGVDPTQFTYSIVLNGCSKLG----SYSLGKLIHARIIVSDSLADLPLDNALLDM 344
Query: 413 LSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY 472
G + EA + P+ +W ++++G S G E L + Y
Sbjct: 345 YCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 473 IIMANLYSCA 482
A + + A
Sbjct: 404 TFSAAISATA 413
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 255/525 (48%), Gaps = 39/525 (7%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
++ G PD+ + +L+ S ++ Y ++ H +V + G ++ + N+L+ Y
Sbjct: 47 INDGEKPDASPLVHLLRV--SGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 82 EIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVM 141
+ A KVFD MP+ D +SWNS++ GY Q G ++E L++E L V P+ + + +
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE-LHRSDVFPNEFSFTAAL 163
Query: 142 QACGQSKDLVLGMEVHGFVNESGIEV-DLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
AC + LG +H + + G+E ++ + N +I MY KCG +D A +F+ M EKD
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 201 VS-------------------------------YGSIISGYMAYGFVVKARDVFRGMENP 229
VS Y +I ++ G A V M NP
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP 283
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+WN +++G V + A + +M SG++ + +L+ + + + + G +H
Sbjct: 284 NSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIH 343
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
A A + D + VA+A+ID Y+K G + A +F ++L++W +I+ YA +GD+
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 350 LALGLYAQM-LDSGIQPDQVTLTAVLTACAHSGLVDEA-WKIFNTMHSKYGIQPLVEQYA 407
A+ L+ Q+ + ++PD+ T +L C+H + E F M ++Y I+P VE
Sbjct: 404 EAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC 463
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
++ + + G++ +A + I E AW ALL S D++ K + E+
Sbjct: 464 SLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDA 523
Query: 468 SSGN--YIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
YI+M+NLY+ RW E ++RK M E GV K GSSWI+
Sbjct: 524 DKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 232 DTWNALISGMVQNNWFEGAIDLVR---EMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
++W+ ++ + + G+I ++R E+ G KP+A L + + + + +++
Sbjct: 22 NSWSTIVPALARF----GSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H Y + + N ++ +++ Y + A +VFD+ ++ W ++++ Y G
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP-LVEQYA 407
+ L+ ++ S + P++ + TA L ACA L I + + K G++ V
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL-VKLGLEKGNVVVGN 196
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETG 454
C++ + + G + +A M E +W A++ S G +E G
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 250/504 (49%), Gaps = 36/504 (7%)
Query: 51 VKEAHCFVLRRGL--ETDIF---VENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMI 105
+++ H +LR L +D+F + ++ R +I + +VF N+MI
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR--DINYSCRVFSQRLNPTLSHCNTMI 84
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
+S E RL+ + S+ + ++ ++ C +S DL+ G+++HG + G
Sbjct: 85 RAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGF 144
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
D L ++ +Y+ C + A ++F+E+ ++D VS+ + S Y+ + RDV
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK---RTRDVL-- 199
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
L M N +G + KP+ VT + + L G
Sbjct: 200 ----------VLFDKM--KNDVDGCV-----------KPDGVTCLLALQACANLGALDFG 236
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
K+VH + + ++ ++ Y++ G + A QVF R R++V WTA+I+ A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS-KYGIQPLVE 404
G A+ + +ML GI P++ TLT +L+AC+HSGLV E F+ M S ++ I+P +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEI 464
Y C+V +L RA L +A I M ++P + W LL V+GDVE G+ HL E+
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVS 524
+ E +G+Y+++ N YS G+WE+ + +R M+E +H G S IE+ G + FI DVS
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 525 NERSDEIYTYLEGLFCMMREEGYI 548
+ R +EIY L + ++ GY+
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYV 500
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 14 LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
L D + VD + PD T L+A A+ + K+ H F+ GL + + N L
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG--KQVHDFIDENGLSGALNLSNTL 258
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
V+ Y RCG + A +VF GM ER+ VSW ++I G + GF +E + EML G + P+
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG-ISPE 317
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVN--ESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
T+ ++ AC S + GM + E I+ +L V+ + + LD A L
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 192 FEEMSEKDD 200
+ M K D
Sbjct: 378 IKSMEMKPD 386
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 243/489 (49%), Gaps = 40/489 (8%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPV-KEAHCFVLRRGLETDIFVENALVTCYCRCGEI 83
G+ D F + LKA SF + K+ HC V++ GLE+ F +AL+ Y CG +
Sbjct: 233 GLVLDGFALPCGLKAC---SFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 84 GLARKVF--DGMPERDTVS-WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
A VF + + +V+ WNSM+ G+ E L +++ + D T+
Sbjct: 290 IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ-SDLCFDSYTLSGA 348
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDD 200
++ C +L LG++VH V SG E+D + + ++ ++A G++ A +LF + KD
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 201 VSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
+++ + LI G V++ + A L RE+
Sbjct: 409 IAF-------------------------------SGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA 320
GL + +++ + + S ++L GK++H I++ Y+ ATA++D Y K G I
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 321 RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+FD R +V WT II + +G A + +M++ GI+P++VT +L+AC HS
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
GL++EA TM S+YG++P +E Y C+V +L +AG EA + I++MP+EP W +
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 441 LLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
LL + + + L + P+ Y ++N Y+ G W++ S+VR+ +++G
Sbjct: 618 LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGA 677
Query: 501 HKIRGSSWI 509
K G SWI
Sbjct: 678 -KESGMSWI 685
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 189/382 (49%), Gaps = 9/382 (2%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
+AH V+++G+ ++F+ N +++ Y + A KVFD M ER+ V+W +M+ GY+ G
Sbjct: 28 QAH--VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDG 85
Query: 113 FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLC 172
+ LY ML + +V++ACG D+ LG+ V+ + + + D+ L
Sbjct: 86 KPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLM 145
Query: 173 NAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
N+V+ MY K G L A F+E+ S+ ++ISGY G + +A +F M P +
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+WN LISG V A++ + MQ GL + L + S+ L GK++H
Sbjct: 206 SWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCV 264
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ---ARSRSLVIWTAIITAYAAHGDAS 349
++ + + + +A+ID Y+ G + A VF Q A + S+ +W ++++ + + +
Sbjct: 265 VKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENE 324
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN-TMHSKYGIQPLVEQYAC 408
AL L Q+ S + D TL+ L C + + ++ + + S Y + +V +
Sbjct: 325 AALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SI 382
Query: 409 MVGVLSRAGKLSEAAKFISEMP 430
+V + + G + +A K +P
Sbjct: 383 LVDLHANVGNIQDAHKLFHRLP 404
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 34/383 (8%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N L++ YC+ G + A +F MP+ + VSWN +I G+ G + ++ + +
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALE--FLVRMQREGL 234
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V DG + ++AC L +G ++H V +SG+E +A+I MY+ CGSL YA +
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
+F + EK V N + WN+++SG + N E A
Sbjct: 295 VFHQ--EKLAV--------------------------NSSVAVWNSMLSGFLINEENEAA 326
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+ L+ ++ S L ++ TL+ + + + NLR G +VH+ + Y+ + V + ++D
Sbjct: 327 LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
+A +G I A ++F + ++ ++ ++ +I G SLA L+ +++ G+ DQ +
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 371 TAVLTACAHSGLVDEAW-KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
+ +L C S L W K + + K G + +V + + G++ M
Sbjct: 447 SNILKVC--SSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM 504
Query: 430 PIEPSAKAWGALLNGASVYGDVE 452
+E +W ++ G G VE
Sbjct: 505 -LERDVVSWTGIIVGFGQNGRVE 526
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
LF + G+ D F V+++LK +S + + K+ H +++G E++ ALV
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWG--KQIHGLCIKKGYESEPVTATALVDM 487
Query: 77 YCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
Y +CGEI +FDGM ERD VSW +I G+ Q G EE R + +M+++G + P+ VT
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG-IEPNKVT 546
Query: 137 IVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM 195
+ ++ AC S L + +E G+E L V+ + + G A EL +M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 196 S-EKDDVSYGSIIS 208
E D + S+++
Sbjct: 607 PLEPDKTIWTSLLT 620
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 147/323 (45%), Gaps = 15/323 (4%)
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
+V D I + ++ CG+ + G + V + GI ++ + N VI+MY L A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 190 ELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI-SGMVQNNWFE 248
++F+EMSE++ V++ +++SGY + G KA +++R M + + N + S +++
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 249 GAID---LVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEVHAY-AIRRCYDQNIYV 303
G I LV E G L+ + V + S + ++ ++ G+ + A + + +
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMY-----VKNGRLIEANSSFKEILRPSSTS 175
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
+I Y K G + A +F + ++V W +I+ + G AL +M G+
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGL 234
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAA 423
D L L AC+ GL+ K + K G++ + ++ + S G L AA
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMG-KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 424 KFISE--MPIEPSAKAWGALLNG 444
+ + + S W ++L+G
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSG 316
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 216/410 (52%), Gaps = 34/410 (8%)
Query: 101 WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV 160
WN+++ Y + + ++Y+ M+ +V+PD ++ V++A Q D LG E+H
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVR-STVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 161 NESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKAR 220
G D + I +Y K G + AR++F+E E+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERK--------------------- 182
Query: 221 DVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
L +WNA+I G+ A+++ +M+ SGL+P+ T+ S
Sbjct: 183 ----------LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLG 232
Query: 281 NLRGGKEVHAYAIRRCYDQ--NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI 338
+L ++H ++ ++ +I + ++ID Y K G + A +F++ R R++V W+++
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSM 292
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
I YAA+G+ AL + QM + G++P+++T VL+AC H GLV+E F M S++
Sbjct: 293 IVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
++P + Y C+V +LSR G+L EA K + EMP++P+ WG L+ G +GDVE ++
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVA 412
Query: 459 DHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSW 508
++ E+EP + G Y+++AN+Y+ G W++ RVRK M+ V KI S+
Sbjct: 413 PYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 10/281 (3%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+ ++ V + + PD +++ V+KA + + KE H +R G D F E+ +
Sbjct: 102 IQVYLGMVRSTVLPDRYSLPIVIKA--AVQIHDFTLGKELHSVAVRLGFVGDEFCESGFI 159
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
T YC+ GE ARKVFD PER SWN++IGG + G E ++++M G + PD
Sbjct: 160 TLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG-LEPDD 218
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIE--VDLPLCNAVIAMYAKCGSLDYARELF 192
T+VSV +CG DL L ++H V ++ E D+ + N++I MY KCG +D A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFE 248
EEM +++ VS+ S+I GY A G ++A + FR M P T+ ++S V E
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 249 GAIDLVREMQGS-GLKPNAVTLASTIPLFSYFSNLRGGKEV 288
M+ L+P + L S L+ K+V
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 37/239 (15%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIA-----SPSFSYYKPVKEAHCFVLRRGLETDIFV 69
+++F +G+ PD FT+ SV + S +F +K V +A + ++DI +
Sbjct: 203 VEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQA-----KTEEKSDIMM 257
Query: 70 ENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
N+L+ Y +CG + LA +F+ M +R+ VSW+SMI GY+ G E + +M G
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG- 316
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG------------IEVDLPLCNAVIA 177
V P+ +T V V+ AC VHG + E G +E L ++
Sbjct: 317 VRPNKITFVGVLSAC-----------VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 178 MYAKCGSLDYARELFEEMSEKDDVS-YGSIISGYMAYGFVVKARDVFRGMENPGLDTWN 235
+ ++ G L A+++ EEM K +V +G ++ G +G V A V M L+ WN
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVE--LEPWN 422
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 221 DVFRGM---ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
D+FR + P WN ++ +++ AI + M S + P+ +L I
Sbjct: 69 DIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAV 128
Query: 278 YFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTA 337
+ GKE+H+ A+R + + + + I Y K G AR+VFD+ R L W A
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNA 188
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN-TMHSK 396
II G A+ A+ ++ M SG++PD T+ +V +C G + A+++ + +K
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 397 YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+ + ++ + + G++ A+ EM + + +W +++ G + G+
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNT 302
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 212/407 (52%), Gaps = 33/407 (8%)
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D + S +++CG ++D G H + G D+ L ++++ +Y G ++ A ++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
EEM E++ VS W A+ISG Q + +
Sbjct: 179 EEMPERNVVS-------------------------------WTAMISGFAQEWRVDICLK 207
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
L +M+ S PN T + + + L G+ VH + ++++ ++I Y
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQPDQVTLT 371
K G + A ++FDQ ++ +V W ++I YA HG A A+ L+ M+ SG +PD +T
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYL 327
Query: 372 AVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI 431
VL++C H+GLV E K FN M +++G++P + Y+C+V +L R G L EA + I MP+
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 432 EPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
+P++ WG+LL V+GDV TG A + +EP+ + ++ +ANLY+ G W+EA+ V
Sbjct: 387 KPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATV 446
Query: 492 RKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
RK M++ G+ G SWIE++ + F A+D SN R EI L L
Sbjct: 447 RKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 32/294 (10%)
Query: 55 HCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFY 114
HC L+ G +D+++ ++LV Y GE+ A KVF+ MPER+ VSW +MI G++Q
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 115 EECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+ C +LY +M S P+ T +++ AC S L G VH G++ L + N+
Sbjct: 203 DICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
+I+MY KCG L A +F++ S KD VS+ S+I+GY +G ++A ++F M
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM-------- 313
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
M SG KP+A+T + + ++ G++
Sbjct: 314 ----------------------MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGD 347
+ + ++D + G + A ++ + + + VIW +++ + HGD
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 8/256 (3%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKA-IASPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
L L++ + P+ +T T++L A S + + V HC L GL++ + + N+L
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV---HCQTLHMGLKSYLHISNSL 262
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
++ YC+CG++ A ++FD +D VSWNSMI GY+Q G + L+ M+ PD
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 134 GVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
+T + V+ +C + + G + + E G++ +L + ++ + + G L A EL E
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 194 EMSEK-DDVSYGSIISGYMAYGFV---VKARDVFRGMENPGLDTWNALISGMVQNNWFEG 249
M K + V +GS++ +G V ++A + +E T L + +++
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Query: 250 AIDLVREMQGSGLKPN 265
A + + M+ GLK N
Sbjct: 443 AATVRKLMKDKGLKTN 458
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 213 YGFVVKARDV----FRGM---ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+GFV + R FRG E+ L +S +++ E + V+ G +
Sbjct: 63 FGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKR---DGWSFD 119
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
A L+S + + R G H A++ + ++Y+ ++++ Y G + A +VF+
Sbjct: 120 AYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFE 179
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE 385
+ R++V WTA+I+ +A + L LY++M S P+ T TA+L+AC SG + +
Sbjct: 180 EMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQ 239
Query: 386 AWKIF-NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ T+H G++ + ++ + + G L +A + + +W +++ G
Sbjct: 240 GRSVHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAG 296
Query: 445 ASVYG 449
+ +G
Sbjct: 297 YAQHG 301
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 209/395 (52%), Gaps = 4/395 (1%)
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
Y ++L G VPD T VS++ ++ + G HG + G + LP+ N+++ MY
Sbjct: 105 FYFDILRFG-FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMY 163
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
CG+LD A++LF E+ ++D VS+ SII+G + G V+ A +F M + + +WN +IS
Sbjct: 164 TCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMIS 223
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
+ N +I L REM +G + N TL + + L+ G+ VHA IR +
Sbjct: 224 AYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNS 283
Query: 300 NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++ + TA+ID Y K + AR++FD R+ V W +I A+ HG L L+ M+
Sbjct: 284 SVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMI 343
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
+ ++PD+VT VL CA +GLV + ++ M ++ I+P CM + S AG
Sbjct: 344 NGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFP 403
Query: 420 SEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMA 476
EA + + +P + P + W LL+ + G+ G+ L E +P + Y ++
Sbjct: 404 EEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLM 463
Query: 477 NLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEM 511
N+YS GRWE+ +RVR+ ++E + +I G +++
Sbjct: 464 NIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 43/270 (15%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
AY + + L + + G PDS+T S++ I K H ++ G
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTC--CVDSGKMCHGQAIKHGC 149
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
+ + V+N+L+ Y CG + LA+K+F +P+RD VSWNS+I G + G +L+ E
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 124 MLS-------------VGSVVP-----------------DGVTIVSVMQACGQSKDLVLG 153
M +G+ P + T+V ++ ACG+S L G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 154 MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAY 213
VH + + + + + A+I MY KC + AR +F+ +S ++ V++ +I +
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH--- 326
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQ 243
G GL+ + A+I+GM++
Sbjct: 327 --------CLHGRPEGGLELFEAMINGMLR 348
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 251/511 (49%), Gaps = 42/511 (8%)
Query: 40 IASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG----LARKVFDGMPE 95
+AS + K +K H + GL + + + L+T + + A +FD +
Sbjct: 16 LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 96 RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG--SVVPDGVTIVSVMQACGQSKDLVLG 153
++ +++MI S+ R ++ M+ + P +T ++ AC ++ +G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG 135
Query: 154 MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAY 213
++H +V ++G+ + D ++ Y+
Sbjct: 136 KQIHCWVVKNGVFLS------------------------------DSHVQTGVLRIYVED 165
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
++ AR VF + P + W+ L++G V+ +++ REM GL+P+ ++ + +
Sbjct: 166 KLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 225
Query: 274 PLFSYFSNLRGGKEVHAYAIRRCY-DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
+ L GK +H + ++ + + +++V TA++D YAK G I A +VF + R++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 333 VIWTAIITAYAAHGDASLALGLYAQM-LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
W A+I YAA+G A A+ ++ + GI+PD V L VL ACAH G ++E +
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
M ++Y I P E Y+C+V ++ RAG+L +A I +MP++P A WGALLNG + +V
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 452 ETGKFACDHLFEIEP----ESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
E G+ A +L ++E E + ++N+Y R EAS+VR +E+ GV K G S
Sbjct: 406 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Query: 508 WIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
+E+ G + F++ DVS+ +I+T + L
Sbjct: 466 VLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 49/338 (14%)
Query: 31 FTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL-ETDIFVENALVTCYCRCGEIGLARKV 89
F + + LKA ++ K+ HC+V++ G+ +D V+ ++ Y + ARKV
Sbjct: 121 FLIVACLKA------CFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKV 174
Query: 90 FDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKD 149
FD +P+ D V W+ ++ GY +CG E ++ EML V + PD ++ + + AC Q
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML-VKGLEPDEFSVTTALTACAQVGA 233
Query: 150 LVLGMEVHGFVNE-SGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIIS 208
L G +H FV + S IE D+ + A++ MYAKCG ++ A E+F++++ ++ S+ ++I
Sbjct: 234 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIG 293
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT 268
GY AYG+ KA +E RE G+KP++V
Sbjct: 294 GYAAYGYAKKAMTCLERLE---------------------------RE---DGIKPDSVV 323
Query: 269 LASTIPLFSYFSNLRGGKEV-----HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
L + ++ L G+ + Y I ++ + I+D + G + A +
Sbjct: 324 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEH----YSCIVDLMCRAGRLDDALNL 379
Query: 324 FDQARSRSLV-IWTAIITAYAAHGDASLALGLYAQMLD 360
++ + L +W A++ H + L +LD
Sbjct: 380 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLD 417
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y GL L++F + G+ PD F+VT+ L A A K H FV +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ--VGALAQGKWIHEFVKK 246
Query: 61 RG-LETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
+ +E+D+FV ALV Y +CG I A +VF + R+ SW ++IGGY+ G+ ++
Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMT 306
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACG------QSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+ + PD V ++ V+ AC + + ++ ME + +
Sbjct: 307 CLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY-----S 361
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDDVS-YGSIISG 209
++ + + G LD A L E+M K S +G++++G
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 231/492 (46%), Gaps = 39/492 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCFVL 59
M+ YS + +F G++ D F+ + LK S S + E H L
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK---SCSRELCVSIGEGLHGIAL 152
Query: 60 RRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER-DTVSWNSMIGGYSQCGFYEECK 118
R G + NAL+ YC CG+I ARKVFD MP+ D V++++++ GY Q
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
L+ ++ VV + T++S + A DL H + G+++DL L A+I M
Sbjct: 213 DLF-RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
Y K G + AR +F+ KD V TWN +I
Sbjct: 272 YGKTGGISSARRIFDCAIRKDVV-------------------------------TWNCMI 300
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
+ E + L+R+M+ +KPN+ T + +Y G+ V
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM 358
+ + TA++D YAK+G + A ++F++ + + + WTA+I+ Y AHG A A+ L+ +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 359 LDSG--IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRA 416
+ ++P+++T VL AC+H GLV E + F M Y P VE Y C+V +L RA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMA 476
G+L EA + I +PI + AW ALL VYG+ + G+ L E+ + I++A
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 477 NLYSCAGRWEEA 488
++ AG E++
Sbjct: 541 GTHAVAGNPEKS 552
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 206/454 (45%), Gaps = 45/454 (9%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
V H ++++ GL+ D F + L+ + +I A +F+ + + +N+MI GYS
Sbjct: 44 VSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSI 102
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
E ++ ++ + G + D + ++ +++C + + +G +HG SG V
Sbjct: 103 SDEPERAFSVFNQLRAKG-LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEK-DDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
L NA+I Y CG + AR++F+EM + D V++ ++++GY+
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQV---------------- 205
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ AL A+DL R M+ S + N TL S + S +L G + H
Sbjct: 206 ---SKKAL------------ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
I+ D ++++ TA+I Y K G I AR++FD A + +V W +I YA G
Sbjct: 251 VLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLE 310
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
+ L QM ++P+ T +L++CA+S + + + + + A +
Sbjct: 311 ECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA-L 369
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
V + ++ G L +A + + M + K+W A+++G YG + A ++E E+
Sbjct: 370 VDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISG---YGAHGLAREAVTLFNKMEEENC 425
Query: 470 G------NYIIMANLYSCAGRWEEASRVRKRMEE 497
++++ N S G E R KRM E
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 182/335 (54%), Gaps = 1/335 (0%)
Query: 177 AMYAKCGSLDYAREL-FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWN 235
A + + G +A L F E D +++ Y G + +AR +F + P L TWN
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWN 185
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
L++ + + +++ ++PN ++L + I + G H Y ++
Sbjct: 186 TLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLY 355
N +V T++ID Y+K G + AR+VFD+ R + + A+I A HG + LY
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 356 AQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSR 415
++ G+ PD T ++AC+HSGLVDE +IFN+M + YGI+P VE Y C+V +L R
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 416 AGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIM 475
+G+L EA + I +MP++P+A W + L + +GD E G+ A HL +E E+SGNY+++
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 476 ANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIE 510
+N+Y+ RW + + R+ M++ V+K G S +
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 14 LLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR--RGLETDIFVEN 71
L D SS + P+ FT S+ KA + +++ + H VL+ + D FV+
Sbjct: 96 LYDQILSSRSNFVRPNEFTYPSLFKASGFDA-QWHRHGRALHAHVLKFLEPVNHDRFVQA 154
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYS---QCGFYEECKRLYMEMLSVG 128
ALV Y CG++ AR +F+ + E D +WN+++ Y+ + EE L+M M
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---- 210
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V P+ +++V+++++C + V G+ H +V ++ + ++ + ++I +Y+KCG L +A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
R++F+EMS++D Y ++I G +GF + ++++ + + GL
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Query: 26 ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGL 85
+ P+ ++ +++K+ A+ + + V AH +VL+ L + FV +L+ Y +CG +
Sbjct: 212 VRPNELSLVALIKSCANLG-EFVRGV-WAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSF 269
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACG 145
ARKVFD M +RD +N+MI G + GF +E LY ++S G +VPD T V + AC
Sbjct: 270 ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG-LVPDSATFVVTISACS 328
Query: 146 QSKDLVLGMEVHGFVNES-GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
S + G+++ + GIE + ++ + + G L+ A E ++M K + +
Sbjct: 329 HSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 219 ARDVFRGMENPGLDTWNALISGMVQN-NWFEGAI-----DLVREMQGSGLKPNAVTLAST 272
A + R + NP + +N LIS +V N N + + D + + + ++PN T S
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 273 IPLFSYFSNL-RGGKEVHAYAIR--RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARS 329
+ + R G+ +HA+ ++ + + +V A++ YA G + AR +F++ R
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 330 RSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG-LVDEAWK 388
L W ++ AYA + + + ++P++++L A++ +CA+ G V W
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWA 238
Query: 389 IFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVY 448
+ + + V ++ + S+ G LS A K EM + + A++ G +V+
Sbjct: 239 HVYVLKNNLTLNQFVG--TSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVH 295
Query: 449 G 449
G
Sbjct: 296 G 296
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 201/360 (55%), Gaps = 8/360 (2%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
KE C + E D+ ++T + + ++ ARK FD MPE+ VSWN+M+ GY+Q
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 242
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
GF E+ RL+ +ML +G V P+ T V V+ AC D L + ++E + ++ +
Sbjct: 243 GFTEDALRLFNDMLRLG-VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 172 CNAVIAMYAKCGSLDYARELFEEM-SEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
A++ M+AKC + AR +F E+ ++++ V++ ++ISGY G + AR +F M
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSG-LKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ +WN+LI+G N AI+ +M G KP+ VT+ S + + ++L G +
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
Y + N ++I YA+ G + A++VFD+ + R +V + + TA+AA+GD
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
L L ++M D GI+PD+VT T+VLTAC +GL+ E +IF ++ + PL + YACM
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 230/528 (43%), Gaps = 76/528 (14%)
Query: 33 VTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGL-ARKVFD 91
+T L AIAS + ++ + + ++ L + + +++C R R +FD
Sbjct: 5 LTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFD 64
Query: 92 GMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLV 151
+ + NSM +S+ + RLY E S ++PD + V+++ G+
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLY-EQRSRCGIMPDAFSFPVVIKSAGR----- 118
Query: 152 LGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY- 210
G+ V + G D + N ++ MY K S++ AR++F+++S++ + +ISGY
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 211 -------------------------MAYGF-----VVKARDVFRGMENPGLDTWNALISG 240
M GF + AR F M + +WNA++SG
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK-------------- 286
QN + E A+ L +M G++PN T I S+ ++ +
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 287 --------EVHA-----YAIRRCYDQ-----NIYVATAIIDTYAKLGFIHGARQVFDQAR 328
++HA + RR +++ N+ A+I Y ++G + ARQ+FD
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 329 SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQVTLTAVLTACAHSGLVDEAW 387
R++V W ++I YA +G A+LA+ + M+D G +PD+VT+ +VL+AC H ++
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
I + + K I+ Y ++ + +R G L EA + EM E ++ L +
Sbjct: 419 CIVDYIR-KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAA 476
Query: 448 YGD-VETGKFACDHLFE-IEPESSGNYIIMANLYSCAGRWEEASRVRK 493
GD VET E IEP+ Y + + AG +E R+ K
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRV-TYTSVLTACNRAGLLKEGQRIFK 523
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 30/262 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAI---ASPSF--SYYKPVKEA- 54
ML Y+ NG L LF + G+ P+ T V+ A A PS S K + E
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 55 ---HCFV----------------LRR-----GLETDIFVENALVTCYCRCGEIGLARKVF 90
+CFV RR G + ++ NA+++ Y R G++ AR++F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 91 DGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDL 150
D MP+R+ VSWNS+I GY+ G + +M+ G PD VT++SV+ ACG DL
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 151 VLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY 210
LG + ++ ++ I+++ ++I MYA+ G+L A+ +F+EM E+D VSY ++ + +
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 211 MAYGFVVKARDVFRGMENPGLD 232
A G V+ ++ M++ G++
Sbjct: 475 AANGDGVETLNLLSKMKDEGIE 496
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 250/506 (49%), Gaps = 35/506 (6%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
AY+ + +L LF+ + + PD+FT + + S SF K ++ H + GL
Sbjct: 80 AYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGF-SESFDT-KGLRCIHGIAIVSGL 137
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
D +A+V Y + G I A K+F +P+ D WN MI GY CGF+++ L+
Sbjct: 138 GFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNL 197
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
M G P+ T+V++ L++ VH F + ++ + A++ MY++C
Sbjct: 198 MQHRGHQ-PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 184 SLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ 243
+ A +F +SE D V+ S LI+G +
Sbjct: 257 CIASACSVFNSISEPDLVACSS-------------------------------LITGYSR 285
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
+ A+ L E++ SG KP+ V +A + + S+ GKEVH+Y IR + +I V
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKV 345
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
+A+ID Y+K G + A +F +++V + ++I HG AS A + ++L+ G+
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGL 405
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAA 423
PD++T +A+L C HSGL+++ +IF M S++GI+P E Y MV ++ AGKL EA
Sbjct: 406 IPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAF 465
Query: 424 KFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNY-IIMANLYSCA 482
+F+ + + GALL+ V+ + + +++ + E Y ++++N+Y+
Sbjct: 466 EFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARY 525
Query: 483 GRWEEASRVRKRMEEIGVHKIRGSSW 508
GRW+E R+R + E K+ G SW
Sbjct: 526 GRWDEVERLRDGISESYGGKLPGISW 551
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 8/271 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M++ Y G + ++LF G P+ +T+ ++ + PS H F L+
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV--AWSVHAFCLK 235
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
L++ +V ALV Y RC I A VF+ + E D V+ +S+I GYS+CG ++E L
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHL 295
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ E+ G PD V + V+ +C + D V G EVH +V G+E+D+ +C+A+I MY+
Sbjct: 296 FAELRMSGK-KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL----DTWNA 236
KCG L A LF + EK+ VS+ S+I G +GF A + F + GL T++A
Sbjct: 355 KCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSA 414
Query: 237 LISGMVQNNWFEGAIDLVREMQGS-GLKPNA 266
L+ + ++ M+ G++P
Sbjct: 415 LLCTCCHSGLLNKGQEIFERMKSEFGIEPQT 445
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 202/477 (42%), Gaps = 75/477 (15%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ 110
++ H FV + L D + L Y ++ ARK+FD PER WNS+I Y++
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 111 CGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
+ L+ ++L PD T + + +S D +HG SG+ D
Sbjct: 84 AHQFTTVLSLFSQILR-SDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
+A++ Y+K G + A +LF + + D + +I GY GF
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF--------------- 187
Query: 231 LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
W +G I+L MQ G +PN T+ + S L VHA
Sbjct: 188 ---------------WDKG-INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA 231
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL 350
+ ++ D + YV A+++ Y++ I A VF+ LV +++IT Y+ G+
Sbjct: 232 FCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDE-AWKIFNTMHSKYGIQPLVEQYACM 409
AL L+A++ SG +PD V + VL +CA L D + K ++ + G++ ++ + +
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAE--LSDSVSGKEVHSYVIRLGLELDIKVCSAL 349
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETG--KF----------- 456
+ + S+ G L A + +P E + ++ +L+ G ++G T KF
Sbjct: 350 IDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPD 408
Query: 457 ---------ACDH---------LFE-------IEPESSGNYIIMANLYSCAGRWEEA 488
C H +FE IEP++ +Y+ M L AG+ EEA
Sbjct: 409 EITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTE-HYVYMVKLMGMAGKLEEA 464
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ YS G ++ L LFA +G PD V VL + A S S KE H +V+R
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG--KEVHSYVIR 336
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
GLE DI V +AL+ Y +CG + A +F G+PE++ VS+NS+I G GF
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAMY 179
+ E+L +G ++PD +T +++ C S L G E+ +E GIE ++ +
Sbjct: 397 FTEILEMG-LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLM 455
Query: 180 AKCGSLDYARELFEEMSEKDD 200
G L+ A E + + D
Sbjct: 456 GMAGKLEEAFEFVMSLQKPID 476
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 196/351 (55%), Gaps = 5/351 (1%)
Query: 164 GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVF 223
G E + + A++ MY G++ A ++F+EM E++ V++ +I+G G KA
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 224 RGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNL 282
M N + +W +I G + + + AI L M +KPN +T+ + +P +L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 283 RGGKEVHAYAIRRCYDQ-NIYVATAIIDTYAKLGFIHGARQVFDQARS--RSLVIWTAII 339
+ VHAY +R + +I V ++ID YAK G I A + F + + ++LV WT +I
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW-KIFNTMHSKYG 398
+A+A HG A+ ++ M G++P++VT+ +VL AC+H GL +E + + FNTM ++Y
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFAC 458
I P V+ Y C+V +L R G+L EA K E+PIE A W LL SVY D E +
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 459 DHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
L E+E G+Y++M+N++ GR+ +A R RK+M+ GV K+ G S +
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 36/258 (13%)
Query: 10 LYRHLLDL-FASSVDAGISP-DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
LY L L F S + + P DSFT +LKA ++P F H L+ G E+ +
Sbjct: 99 LYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHV 158
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYE------------ 115
+V+ ALV Y G + A KVFD MPER+ V+WN MI G + G +E
Sbjct: 159 YVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR 218
Query: 116 -------------------ECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV 156
E L+ M++ ++ P+ +TI++++ A DL + V
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSV 278
Query: 157 HGFVNESG-IEVDLPLCNAVIAMYAKCGSLDYARELFEEMS--EKDDVSYGSIISGYMAY 213
H +V + G + D+ + N++I YAKCG + A + F E+ K+ VS+ ++IS + +
Sbjct: 279 HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIH 338
Query: 214 GFVVKARDVFRGMENPGL 231
G +A +F+ ME GL
Sbjct: 339 GMGKEAVSMFKDMERLGL 356
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 249/511 (48%), Gaps = 42/511 (8%)
Query: 40 IASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG----LARKVFDGMPE 95
+AS + K +K H + GL + + + L+T + + A +FD +
Sbjct: 16 LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 96 RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG--SVVPDGVTIVSVMQACGQSKDLVLG 153
++ +++MI S+ R ++ M+ + P +T ++ AC ++ +G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 154 MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAY 213
++H +V ++G+ + D ++ Y+
Sbjct: 136 KQIHCWVVKNGVFLS------------------------------DGHVQTGVLRIYVED 165
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
+ AR VF + P + W+ L++G V+ +++ +EM G++P+ ++ + +
Sbjct: 166 KLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTAL 225
Query: 274 PLFSYFSNLRGGKEVHAYAIR-RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
+ L GK +H + + R + +++V TA++D YAK G I A +VF++ R++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 333 VIWTAIITAYAAHGDASLALGLYAQM-LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
W A+I YAA+G A A ++ + GI+PD V L VL ACAH G ++E +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
M ++YGI P E Y+C+V ++ RAG+L +A I +MP++P A WGALLNG + +V
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 452 ETGKFACDHLFEIEP----ESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
E G+ A +L ++E E + ++N+Y R EA +VR +E+ G+ K G S
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Query: 508 WIEMSGRLIAFIAKDVSNERSDEIYTYLEGL 538
+E+ G + F++ DVS+ +I+T + L
Sbjct: 466 LLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 45/352 (12%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL-ETDIFVENALVT 75
L + I+P T ++ A F + K+ HC+V++ G+ +D V+ ++
Sbjct: 103 LMVKEEEEDITPSYLTFHFLIVACLKACF--FSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 76 CYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGV 135
Y + ARKVFD +P+ D V W+ ++ GY +CG E ++ EML G + PD
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEF 219
Query: 136 TIVSVMQACGQSKDLVLGMEVHGFVNESG-IEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
++ + + AC Q L G +H FV + IE D+ + A++ MYAKCG ++ A E+FE+
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK 279
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
++ ++ S+ ++I GY AYG+ KA +E
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE--------------------------- 312
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV-----HAYAIRRCYDQNIYVATAIID 309
RE G+KP++V L + ++ L G+ + Y I ++ + I+D
Sbjct: 313 RE---DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEH----YSCIVD 365
Query: 310 TYAKLGFIHGARQVFDQARSRSLV-IWTAIITAYAAHGDASLALGLYAQMLD 360
+ G + A + ++ + L +W A++ H + L +LD
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLD 417
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ Y GL L++F + GI PD F+VT+ L A A K H FV +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ--VGALAQGKWIHEFVKK 246
Query: 61 -RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
R +E+D+FV ALV Y +CG I A +VF+ + R+ SW ++IGGY+ G+ ++
Sbjct: 247 KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVIAM 178
+ + PD V ++ V+ AC L G + GI + ++ +
Sbjct: 307 CLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDL 366
Query: 179 YAKCGSLDYARELFEEMSEKDDVS-YGSIISG 209
+ G LD A +L E+M K S +G++++G
Sbjct: 367 MCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 253/492 (51%), Gaps = 52/492 (10%)
Query: 27 SPD--SFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
SPD S T T VL A + SY + ++ H ++++G ET + AL+ Y + G +
Sbjct: 79 SPDLSSHTFTPVLGACSL--LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLV 136
Query: 85 LARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC 144
+ +VF+ + E+D VSWN+++ G+ + G +E ++ M + + T+ SV++ C
Sbjct: 137 DSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE-FTLSSVVKTC 195
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS-EKDDVSY 203
K L G +VH V +G ++ + L A+I+ Y+ G ++ A +++ ++ D+V
Sbjct: 196 ASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV-- 252
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
N+LISG ++N ++ A L+ S +
Sbjct: 253 -----------------------------MLNSLISGCIRNRNYKEAFLLM-----SRQR 278
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
PN L+S++ S S+L GK++H A+R + + + ++D Y K G I AR +
Sbjct: 279 PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTI 338
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD--SGIQPDQVTLTAVLTACAHSG 381
F S+S+V WT++I AYA +GD AL ++ +M + SG+ P+ VT V++ACAH+G
Sbjct: 339 FRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAG 398
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA---- 437
LV E + F M KY + P E Y C + +LS+AG+ E + + M +E ++
Sbjct: 399 LVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCA 457
Query: 438 -WGALLNGASVYGDVETGKFACDHLF-EIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
W A+L+ S+ D+ G++ L E PE++ Y++++N Y+ G+W+ +R ++
Sbjct: 458 IWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKL 517
Query: 496 EEIGVHKIRGSS 507
+ G+ K G S
Sbjct: 518 KNKGLVKTAGHS 529
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 150/358 (41%), Gaps = 49/358 (13%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L + NG + L +FA+ + FT++SV+K A S + K+ H V+
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCA--SLKILQQGKQVHAMVVV 213
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMP-ERDTVSWNSMIGGYSQCGFYEECKR 119
G + + + A+++ Y G I A KV++ + D V NS+I G + Y+E
Sbjct: 214 TGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA-- 270
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
L + P+ + S + C + DL +G ++H +G D LCN ++ MY
Sbjct: 271 ----FLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALIS 239
KCG + AR +F + K VS+ S+I Y G VKA ++FR M
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCE----------- 375
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY---AIRRC 296
+GSG+ PN+VT I ++ ++ GKE R
Sbjct: 376 ------------------EGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLV 417
Query: 297 YDQNIYVATAIIDTYAKLGFIHG-----ARQVFDQARSRSLVIWTAIITAYAAHGDAS 349
YV ID +K G R + + +S IW A+++A + + D +
Sbjct: 418 PGTEHYV--CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLT 473
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 52/390 (13%)
Query: 86 ARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD--GVTIVSVMQA 143
A +FD +P+RD S NS + + + G + L+++ + PD T V+ A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ---IHRASPDLSSHTFTPVLGA 93
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
C G +VH + + G E A+I MY+K
Sbjct: 94 CSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSK---------------------- 131
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
YG +V + VF +E L +WNAL+SG ++N + A+ + M ++
Sbjct: 132 ---------YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
+ TL+S + + L+ GK+VHA + D + + TA+I Y+ +G I+ A +V
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKV 241
Query: 324 FDQARSRS-LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGL 382
++ + V+ ++I+ + + A +L S +P+ L++ L C+ +
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDN-- 294
Query: 383 VDEAW--KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGA 440
+ W K + + + G + ++ + + G++ +A +P S +W +
Sbjct: 295 -SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSWTS 352
Query: 441 LLNGASVYGDVETGKFACDHLFEIEPESSG 470
+++ +V GD G A + E+ E SG
Sbjct: 353 MIDAYAVNGD---GVKALEIFREMCEEGSG 379
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 201/389 (51%), Gaps = 1/389 (0%)
Query: 46 SYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMI 105
S + +K+ H +++ L D + L++ GE A VF+ + T +WN MI
Sbjct: 31 SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
S E L++ M+ D T V++AC S + LG +VHG ++G
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF 150
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRG 225
D+ N ++ +Y KCG D R++F++M + VS+ +++ G ++ + A VF
Sbjct: 151 FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQ 210
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
M + +W A+I+ V+N + A L R MQ +KPN T+ + + + +L G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAH 345
+ VH YA + + + ++ TA+ID Y+K G + AR+VFD + +SL W ++IT+ H
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVH 330
Query: 346 GDASLALGLY-AQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
G AL L+ ++ ++PD +T VL+ACA++G V + + F M YGI P+ E
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIRE 390
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEP 433
ACM+ +L +A ++ +A+ + M +P
Sbjct: 391 HNACMIQLLEQALEVEKASNLVESMDSDP 419
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 220/438 (50%), Gaps = 11/438 (2%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L LF S + G SP+ T SVL S ++ H +++ G ET I + NAL+
Sbjct: 301 LKLFVSMPEHGFSPNQGTYVSVLGV--SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALI 358
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y +CG + +R FD + +++ V WN+++ GY+ C L+++ML +G P
Sbjct: 359 DFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG-FRPTE 416
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T + +++C ++ ++H + G E + + ++++ YAK ++ A L +
Sbjct: 417 YTFSTALKSCCVTE----LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 195 MSEKDDVSYGSIISG-YMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
S V +I++G Y G ++ + +E P +WN I+ ++++ E I+L
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-QNIYVATAIIDTYA 312
+ M S ++P+ T S + L S +L G +H + + + +V +ID Y
Sbjct: 533 FKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYG 592
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
K G I +VF++ R ++L+ WTA+I+ HG AL + + L G +PD+V+ +
Sbjct: 593 KCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFIS 652
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
+LTAC H G+V E +F M YG++P ++ Y C V +L+R G L EA I EMP
Sbjct: 653 ILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFP 711
Query: 433 PSAKAWGALLNGASVYGD 450
A W L+G + + +
Sbjct: 712 ADAPVWRTFLDGCNRFAE 729
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 66/450 (14%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL-ETDIFVENALVTCYCRCGEI 83
G P+ TV+ +L + + + H L+ GL D FV L+ Y R +
Sbjct: 110 GYLPNQSTVSGLLSCASLD----VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 84 GLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
+A +VF+ MP + +WN M+ GF +EC + E++ +G+ + + + + V++
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKG 224
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
KDL + ++H + G++ ++ + N++I+ Y KCG+ A +F++ D VS
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS- 283
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLK 263
WNA+I ++ A+ L M G
Sbjct: 284 ------------------------------WNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 264 PNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQV 323
PN T S + + S L G+++H I+ + I + A+ID YAK G + +R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 324 FDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA----- 378
FD R +++V W A+++ Y A+ D + L L+ QML G +P + T + L +C
Sbjct: 374 FDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
Query: 379 --HSGLVDEAWK----IFNTMHSKYGIQPLVEQYACMV----------------GVLSRA 416
HS +V ++ + +++ Y L+ ++ G+ SR
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRR 492
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGAS 446
G+ E+ K IS + +P +W + S
Sbjct: 493 GQYHESVKLISTLE-QPDTVSWNIAIAACS 521
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 38/404 (9%)
Query: 42 SPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSW 101
+PSF+ K + A L L ++V N +++ Y + GE+ LA KVFD MPER+ VS+
Sbjct: 25 APSFARTKAL-HALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSF 83
Query: 102 NSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN 161
N++I GYS+ G ++ ++ EM G +P+ T VS + +C S D+ G ++HG
Sbjct: 84 NTIIKGYSKYGDVDKAWGVFSEMRYFG-YLPNQST-VSGLLSCA-SLDVRAGTQLHGLSL 140
Query: 162 ESGI-EVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKAR 220
+ G+ D + ++ +Y + L+ A ++FE+M K
Sbjct: 141 KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK---------------------- 178
Query: 221 DVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
L+TWN ++S + + + + RE+ G + + S
Sbjct: 179 ---------SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIIT 340
+L K++H A ++ D I V ++I Y K G H A ++F A S +V W AII
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
A A + AL L+ M + G P+Q T +VL + L+ +I + M K G +
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCE 348
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNG 444
+ ++ ++ G L E ++ + + + W ALL+G
Sbjct: 349 TGIVLGNALIDFYAKCGNL-EDSRLCFDYIRDKNIVCWNALLSG 391
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 202/465 (43%), Gaps = 71/465 (15%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ G + + F V G S + VLK ++ K+ HC +
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC--VKDLDISKQLHCSATK 243
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+GL+ +I V N+L++ Y +CG +A ++F D VSWN++I ++ + +L
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKL 303
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
++ M G P+ T VSV+ + L G ++HG + ++G E + L NA+I YA
Sbjct: 304 FVSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KCG+L+ +R F+ + +K+ V WNAL+SG
Sbjct: 363 KCGNLEDSRLCFDYIRDKNIV-------------------------------CWNALLSG 391
Query: 241 MVQNNWFEGAI--DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
+G I L +M G +P T ++ + + +++H+ +R Y+
Sbjct: 392 YANK---DGPICLSLFLQMLQMGFRPTEYTFSTALK----SCCVTELQQLHSVIVRMGYE 444
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA-YAAHGDASLALGLYAQ 357
N YV ++++ +YAK ++ A + D A + V+ I+ Y+ G ++ L +
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 504
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
+ QPD V+ + AC+ S +E ++F M + I+P ++Y V +LS
Sbjct: 505 LE----QPDTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIRP--DKYT-FVSILSLCS 556
Query: 418 KLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLF 462
KL + L G+S++G + F+C F
Sbjct: 557 KLCD-------------------LTLGSSIHGLITKTDFSCADTF 582
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 36/253 (14%)
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE--SGIEVDLPLCNAVIAMYAKC 182
LS G + +VS++ C ++ +H S + + +CN +I++Y K
Sbjct: 3 LSCGDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKL 62
Query: 183 GSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV 242
G + A ++F++M E++ VS+ +II GY YG V KA VF
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVF------------------- 103
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR-CYDQNI 301
EM+ G PN T++ + S ++R G ++H +++ + +
Sbjct: 104 ------------SEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADA 149
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
+V T ++ Y +L + A QVF+ +SL W +++ G + + +++
Sbjct: 150 FVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRM 209
Query: 362 GIQPDQVTLTAVL 374
G + + VL
Sbjct: 210 GASLTESSFLGVL 222
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
A S + + +++LF + + I PD +T S+L + H + +
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS--KLCDLTLGSSIHGLITKTDF 576
Query: 64 E-TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYM 122
D FV N L+ Y +CG I KVF+ E++ ++W ++I G+ +E +
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFK 636
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
E LS+G PD V+ +S++ AC + GM + + + G+E ++ + + A+
Sbjct: 637 ETLSLG-FKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARN 695
Query: 183 GSLDYARELFEEM 195
G L A L EM
Sbjct: 696 GYLKEAEHLIREM 708
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 214/417 (51%), Gaps = 16/417 (3%)
Query: 101 WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV 160
+N++I Y G Y+ L+ ML+ V P+ +T S+++A S + G+ +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLA-SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 161 NESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII-----SGYMAYGF 215
+ G D + + + Y + G L+ +R++F+++ V+ S++ +G M Y F
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 216 VVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREM---QGSGLKPNAVTLAST 272
+ F+ M + +W +I+G + A+ + EM + + + PN T S
Sbjct: 173 -----EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 273 IPLFSYFSN--LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR 330
+ + F +R GK++H Y + + + TA++D Y K G + A +FDQ R +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
+ W AII+A A++G AL ++ M S + P+ +TL A+LTACA S LVD ++F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGD 450
+++ S+Y I P E Y C+V ++ RAG L +AA FI +P EP A GALL ++ +
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 451 VETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
E G L ++P+ G Y+ ++ + W EA ++RK M E G+ KI S
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 41/292 (14%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ +Y G Y+ L LF + + + P++ T S++KA A SFS V H L+
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKA-ACSSFSVSYGVA-LHGQALK 114
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDG---------------------------- 92
RG D FV+ + V Y G++ +RK+FD
Sbjct: 115 RGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEY 174
Query: 93 ---MPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLS--VGSVVPDGVTIVSVMQACGQS 147
MP D VSW ++I G+S+ G + + ++ EM+ + P+ T VSV+ +C
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 148 KD--LVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+ LG ++HG+V I + L A++ MY K G L+ A +F+++ +K ++ +
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 206 IISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFEGAIDL 253
IIS + G +A ++F M+ +P T A+++ ++ + I L
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 210/418 (50%), Gaps = 41/418 (9%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR-RGLETDI 67
GL+R ++ + I P+S +T++L + K KE H VL+ +
Sbjct: 301 GLFRTMIS------EEKIYPNSVILTTILPVLGD--VKALKLGKEVHAHVLKSKNYVEQP 352
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
FV + L+ YC+CG++ R+VF G +R+ +SW +++ GY+ G +++ R + M
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G PD VTI +V+ C + + + G E+H + ++ ++ L +++ MY+KCG +Y
Sbjct: 413 G-FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEY 471
Query: 188 ARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
LF+ + +++ VKA W A+I V+N
Sbjct: 472 PIRLFDRLEQRN-----------------VKA--------------WTAMIDCYVENCDL 500
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
I++ R M S +P++VT+ + + S L+ GKE+H + +++ ++ +V+ I
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARI 560
Query: 308 IDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
I Y K G + A FD + + WTAII AY + A+ + QM+ G P+
Sbjct: 561 IKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNT 620
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
T TAVL+ C+ +G VDEA++ FN M Y +QP E Y+ ++ +L+R G++ EA +
Sbjct: 621 FTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 189/369 (51%), Gaps = 34/369 (9%)
Query: 11 YRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVE 70
Y+ +L F + G+ + +++++V K+ A S + + H ++ GL +F++
Sbjct: 195 YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGAS--ALRQGLKTHALAIKNGLFNSVFLK 252
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+LV Y +CG++GLAR+VFD + ERD V W +MI G + E L+ M+S +
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA-VIAMYAKCGSLDYAR 189
P+ V + +++ G K L LG EVH V +S V+ P ++ +I +Y KCG + R
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGR 372
Query: 190 ELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEG 249
+F YGS K R+ +W AL+SG N F+
Sbjct: 373 RVF----------YGS------------KQRNAI---------SWTALMSGYAANGRFDQ 401
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
A+ + MQ G +P+ VT+A+ +P+ + ++ GKE+H YA++ + N+ + T+++
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMV 461
Query: 310 TYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
Y+K G ++FD+ R++ WTA+I Y + D + ++ ML S +PD VT
Sbjct: 462 MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Query: 370 LTAVLTACA 378
+ VLT C+
Sbjct: 522 MGRVLTVCS 530
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 52 KEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQC 111
K+ H + GLE++ F+ LV Y CG + A+KVFD + SWN+++ G
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 112 G--FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
G Y++ + EM +G V + ++ +V ++ + L G++ H ++G+ +
Sbjct: 191 GKKRYQDVLSTFTEMRELG-VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
L +++ MY KCG + AR +F+E+ E+D V
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIV---------------------------- 281
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
W A+I+G+ N A+ L R M + PN+V L + +P+ L+ GKEV
Sbjct: 282 ---VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 289 HAYAIR-RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGD 347
HA+ ++ + Y + +V + +ID Y K G + R+VF ++ R+ + WTA+++ YAA+G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
AL M G +PD VT+ VL CA + + +I + K P V
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI-HCYALKNLFLPNVSLVT 457
Query: 408 CMVGVLSRAGKLSEAAKFISEMPI-------EPSAKAWGALLN 443
++ + S+ G + E PI + + KAW A+++
Sbjct: 458 SLMVMYSKCG--------VPEYPIRLFDRLEQRNVKAWTAMID 492
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 152/326 (46%), Gaps = 47/326 (14%)
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
+ T ++++AC + K L+ G +VH + +G+E + L ++ MY CGS+ A+++F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMV--QNNWFEGA 250
+E + + S WNAL+ G V ++
Sbjct: 170 DESTSSNVYS-------------------------------WNALLRGTVISGKKRYQDV 198
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+ EM+ G+ N +L++ F+ S LR G + HA AI+ ++++ T+++D
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQPDQVT 369
Y K G + AR+VFD+ R +V+W A+I A + ALGL+ M+ + I P+ V
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 370 LTAVLTACAHSGLVDEAWKIFNTMHS------KYGIQPLVEQYACMVGVLSRAGKLSEAA 423
LT +L +A K+ +H+ Y QP V ++ ++ + + G ++
Sbjct: 319 LTTILPVLGDV----KALKLGKEVHAHVLKSKNYVEQPFV--HSGLIDLYCKCGDMASGR 372
Query: 424 KFISEMPIEPSAKAWGALLNGASVYG 449
+ + +A +W AL++G + G
Sbjct: 373 RVFYGSK-QRNAISWTALMSGYAANG 397
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
QNN E A+ ++ ++ G+ NA T ++ + +L GK+VH + + N +
Sbjct: 89 QNN-LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASL--ALGLYAQMLD 360
+ T ++ Y G + A++VFD++ S ++ W A++ G L + +M +
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
G+ + +L+ V + A + + + K + + K G+ V +V + + GK+
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266
Query: 421 EAAKFISEMPIEPSAKAWGALLNG 444
A + E+ +E WGA++ G
Sbjct: 267 LARRVFDEI-VERDIVVWGAMIAG 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ Y N R +++F + + PDS T+ VL + K KE H +L+
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSD--LKALKLGKELHGHILK 547
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+ E+ FV ++ Y +CG++ A FD + + +++W ++I Y + +
Sbjct: 548 KEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINC 607
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL--------- 171
+ +M+S G P+ T +V+ C Q+ GFV+E+ +L L
Sbjct: 608 FEQMVSRG-FTPNTFTFTAVLSICSQA----------GFVDEAYRFFNLMLRMYNLQPSE 656
Query: 172 --CNAVIAMYAKCGSLDYAREL 191
+ VI + +CG ++ A+ L
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 230/492 (46%), Gaps = 38/492 (7%)
Query: 49 KPVKEAHCFVLRRGLETDIFVENALVTCYCR---CGEIGLARKVFDGM-PERDTVSWNSM 104
K +++ H V+ GL+ + N L+ +C G + A+ +FD + T WN +
Sbjct: 19 KKLRKIHSHVIINGLQHHPSIFNHLLR-FCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYL 77
Query: 105 IGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESG 164
I G+S Y ML PD T +++C + K + +E+HG V SG
Sbjct: 78 IRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSG 137
Query: 165 IEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFR 224
D + +++ Y+ GS++ A ++F+EM +D
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD------------------------- 172
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
L +WN +I A+ + + M G+ ++ TL + + ++ S L
Sbjct: 173 ------LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 285 GKEVHAYAIR-RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYA 343
G +H A RC + ++V+ A+ID YAK G + A VF+ R R ++ W ++I Y
Sbjct: 227 GVMLHRIACDIRC-ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG 285
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLV 403
HG A+ + +M+ SG++P+ +T +L C+H GLV E + F M S++ + P V
Sbjct: 286 VHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNV 345
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
+ Y CMV + RAG+L + + I W LL ++ ++E G+ A L +
Sbjct: 346 KHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQ 405
Query: 464 IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDV 523
+E ++G+Y++M ++YS A + + +RK + + + G SWIE+ ++ F+ D
Sbjct: 406 LEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDK 465
Query: 524 SNERSDEIYTYL 535
+ S IY+ L
Sbjct: 466 MHPESAVIYSEL 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPS-----FSYYKPVKEAH 55
M+ +S GL+ L ++ + G+ DS+T+ ++L + A S ++ +
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 56 CFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYE 115
C E+ +FV NAL+ Y +CG + A VF+GM +RD ++WNSMI GY G
Sbjct: 239 C-------ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 116 ECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV--DLPLCN 173
E + +M++ G V P+ +T + ++ C + G+E H + S + ++
Sbjct: 292 EAISFFRKMVASG-VRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYG 349
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDD 200
++ +Y + G L+ + E+ S +D
Sbjct: 350 CMVDLYGRAGQLENSLEMIYASSCHED 376
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 215/422 (50%), Gaps = 41/422 (9%)
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
S V + ++ + Q + G ++H V + G + + +++ Y+ G +DYA
Sbjct: 60 SFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYA 119
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
R++F+E EK ++ W A+IS +N
Sbjct: 120 RQVFDETPEKQNIVL------------------------------WTAMISAYTENENSV 149
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD--QNIYVATA 306
AI+L + M+ ++ + V + + + ++ G+E+++ +I+R ++ + +
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQM------LD 360
+++ Y K G AR++FD++ + + +T++I YA +G A +L L+ +M D
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
+ I P+ VT VL AC+HSGLV+E + F +M Y ++P + CMV + R+G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
+A +FI++MPI+P+ W LL S++G+VE G+ +FE++ + G+Y+ ++N+Y+
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 481 CAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFC 540
G W+E S++R R+ + ++ G SWIE+ + F++ +N+ + E L C
Sbjct: 390 SKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRC 446
Query: 541 MM 542
++
Sbjct: 447 LV 448
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 43/378 (11%)
Query: 29 DSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARK 88
DSF+V +K ++ S ++ H V + G I ++ +LV Y G++ AR+
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDG-RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQ 121
Query: 89 VFDGMPER-DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
VFD PE+ + V W +MI Y++ E L+ M + DGV + + AC
Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIELDGVIVTVALSACADL 180
Query: 148 KDLVLGMEVHG--FVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGS 205
+ +G E++ + + +DL L N+++ MY K G + AR+LF+E KD +Y S
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPN 265
+I GY G ++ ++F+ M+ + + Q + + PN
Sbjct: 241 MIFGYALNGQAQESLELFKKMKT-------------------------IDQSQDTVITPN 275
Query: 266 AVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA----IIDTYAKLGFIHGAR 321
VT + S+ + GK I D N+ A ++D + + G + A
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 322 QVFDQARSR-SLVIWTAIITAYAAHGDASLALGLYAQM--LDSGIQPDQVTLTAVLTACA 378
+ +Q + + VIW ++ A + HG+ L + ++ LD D V L+ + A
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIY---A 389
Query: 379 HSGLVDEAWKIFNTMHSK 396
G+ DE K+ + + +
Sbjct: 390 SKGMWDEKSKMRDRVRKR 407
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 34/459 (7%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
++ V N+++ Y R G A VF M +RD VSWN +I S G E + M
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
+ + PD T+ V+ C ++L G + + G + + A I M++KC L
Sbjct: 228 EM-EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRL 286
Query: 186 DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
D + +LF E+ + D V S+I Y G D I M Q+
Sbjct: 287 DDSVKLFRELEKWDSVLCNSMIGSY--------------SWHCCGEDALRLFILAMTQS- 331
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
++P+ T +S + + L G +VH+ I+ +D + VAT
Sbjct: 332 ----------------VRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVAT 374
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQ 364
++++ Y K G + A VF + + L+ W +I A + A +L ++ Q+L + ++
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
PD+VTL +L AC ++G V+E +IF++M +G+ P E YAC++ +L R G ++EA
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 425 FISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGR 484
++P EPS+ W +L + GD + + E EP+SS Y+++ +Y R
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 485 WEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDV 523
WE + ++R M E + +GSS I + + +F A +
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQL 593
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 46/302 (15%)
Query: 81 GEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT--IV 138
G + A +FD MPERD VSWN+MI G CGF+E R++ +M + P T I+
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDM-QRWEIRPTEFTFSIL 142
Query: 139 SVMQACGQSKDLVLGMEVHGFVNESGI-EVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
+ + C + G ++HG SG+ +L + N+V+ MY + G DYA +F M +
Sbjct: 143 ASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 198 KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID---LV 254
+D VS WN LI + E A+D L+
Sbjct: 198 RDVVS-------------------------------WNCLILSCSDSGNKEVALDQFWLM 226
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
REM+ ++P+ T++ + + S L GK+ A I+ + N V A ID ++K
Sbjct: 227 REME---IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKC 283
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
+ + ++F + V+ ++I +Y+ H AL L+ + ++PD+ T ++VL
Sbjct: 284 NRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
Query: 375 TA 376
++
Sbjct: 344 SS 345
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 4/233 (1%)
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSI 206
SK L VH + E+G N + +Y K GS+ A +LF+++ +K+ +++
Sbjct: 17 SKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVC 76
Query: 207 ISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNA 266
+ G G++ A D+F M + +WN +ISG+V + E I + +MQ ++P
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTE 136
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ-NIYVATAIIDTYAKLGFIHGARQVFD 325
T + L S + +R G+++H AI + N+ V +++D Y +LG A VF
Sbjct: 137 FTFS---ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 326 QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
R +V W +I + + G+ +AL + M + IQPD+ T++ V++ C+
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 42/352 (11%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
LD F + I PD +TV+ V+ +I S K K+A ++ G ++ V A +
Sbjct: 220 LDQFWLMREMEIQPDEYTVSMVV-SICSDLRELSKG-KQALALCIKMGFLSNSIVLGAGI 277
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQ--CGFYEECKRLYMEMLSVGSVVP 132
+ +C + + K+F + + D+V NSMIG YS CG E+ RL++ ++ SV P
Sbjct: 278 DMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG--EDALRLFILAMT-QSVRP 334
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D T SV+ + L G +VH V + G ++D + +++ MY K GS+D A +F
Sbjct: 335 DKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVF 393
Query: 193 EEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID 252
+ KD + + ++I G V++ +F +
Sbjct: 394 AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL-------------------------- 427
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA--TAIIDT 310
+ LKP+ VTL + Y + G ++ + ++ + + N II+
Sbjct: 428 ----LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS-SMEKAHGVNPGNEHYACIIEL 482
Query: 311 YAKLGFIHGARQVFDQAR-SRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
++G I+ A+ + D+ S IW I+ A GD LA + ML+S
Sbjct: 483 LCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
M+ +YS++ L LF ++ + PD FT +SVL ++ + + V H V++
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADV---HSLVIK 363
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G + D V +L+ Y + G + LA VF +D + WN++I G ++ E +
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV 167
+ ++L S+ PD VT++ ++ AC + GFVNE GI++
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVACCYA----------GFVNE-GIQI 459
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 251/568 (44%), Gaps = 74/568 (13%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV---------- 74
G DSFT++++L + S +E H +R GL ++ V NAL+
Sbjct: 280 GFGVDSFTLSTLLSSCTDSSVLLRG--RELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 75 ---------------------TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGF 113
T Y G + A ++F + E++T+++N+++ G+ + G
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+ +L+ +ML G + D ++ S + ACG + + ++HGF + G + +
Sbjct: 398 GLKALKLFTDMLQRGVELTD-FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT 456
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKDDVSYG--SIISGYMAYGFVVKARDVFRGMENPGL 231
A++ M +C + A E+F++ D S SII GY G KA +F
Sbjct: 457 ALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH------- 509
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
R + L + V+L + + G ++H Y
Sbjct: 510 -----------------------RTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCY 546
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLA 351
A++ Y +I + ++I YAK A ++F+ R ++ W ++I+ Y + A
Sbjct: 547 ALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEA 606
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAH--SGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
L L+++M + I+PD +TLT V++A + S + +F +M + Y I+P E Y
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAF 666
Query: 410 VGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESS 469
V VL G L EA I+ MP++P ALL+ ++ + K + +PE+
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETP 726
Query: 470 GNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSD 529
YI+ +N+YS +G W + +R+ M E G K SWI ++ +F A+D S+ +
Sbjct: 727 SEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Query: 530 EIYTYLEGLFCMMREEG------YILQE 551
+IY LE L + G Y+LQE
Sbjct: 787 DIYRGLEILIMECLKVGYEPNTEYVLQE 814
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 188/384 (48%), Gaps = 14/384 (3%)
Query: 15 LDLFASSVDAG-ISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
L +F AG + P+ +T ++L A S + + H +++ G +FV N+L
Sbjct: 165 LKVFFRMRKAGLVQPNEYTFVAILTACVR--VSRFSLGIQIHGLIVKSGFLNSVFVSNSL 222
Query: 74 VTCYCR-----CGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
++ Y + C ++ K+FD +P+RD SWN+++ + G + L+ EM V
Sbjct: 223 MSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVE 279
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
D T+ +++ +C S L+ G E+HG G+ +L + NA+I Y+K +
Sbjct: 280 GFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKV 339
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFE 248
L+E M +D V++ +I+ YM++G V A ++F + T+NAL++G +N
Sbjct: 340 ESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGL 399
Query: 249 GAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAII 308
A+ L +M G++ +L S + S + +++H + I+ N + TA++
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 309 DTYAKLGFIHGARQVFDQARSR--SLVIWTAIITAYAAHGDASLALGLYAQML-DSGIQP 365
D + + A ++FDQ S S T+II YA +G A+ L+ + L + +
Sbjct: 460 DMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL 519
Query: 366 DQVTLTAVLTACAHSGLVDEAWKI 389
D+V+LT +L C G + ++I
Sbjct: 520 DEVSLTLILAVCGTLGFREMGYQI 543
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 191/392 (48%), Gaps = 23/392 (5%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
NAL++ Y + G A VF + VS+ ++I G+S+ E +++ M G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK--CGSLDYA 188
P+ T V+++ AC + LG+++HG + +SG + + N+++++Y K S D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGM---ENPGLDTWNALISGMVQNN 245
+LF+E+ ++D S+ +++S + G KA D+F M E G+D++ +S ++ +
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFT--LSTLLSSC 295
Query: 246 WFEGAIDLVREMQGSGLKPNAVT-LASTIPLFSYFSNLRGGKEVHA-YAIRRCYDQNIYV 303
+ RE+ G ++ + L+ L ++S K+V + Y + D +
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF- 354
Query: 304 ATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGI 363
T +I Y G + A ++F ++ + + A++ + +G AL L+ ML G+
Sbjct: 355 -TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 364 QPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYG--IQPLVEQYACMVGVLSRAGK 418
+ +LT+ + AC GLV E K+ +H K+G P ++ ++ + +R +
Sbjct: 414 ELTDFSLTSAVDAC---GLVSEK-KVSEQIHGFCIKFGTAFNPCIQ--TALLDMCTRCER 467
Query: 419 LSEAAKFISEMPIE-PSAKAWGALLNGASVYG 449
+++A + + P S+KA +++ G + G
Sbjct: 468 MADAEEMFDQWPSNLDSSKATTSIIGGYARNG 499
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAI 251
F ++ E+ ++IS Y+ GF +A VF + +P + ++ ALISG + N A+
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 252 DLVREMQGSGL-KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
+ M+ +GL +PN T + + S G ++H ++ + +++V+ +++
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 311 YAKL--GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLD-SGIQPDQ 367
Y K ++FD+ R + W ++++ G + A L+ +M G D
Sbjct: 226 YDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS 285
Query: 368 VTLTAVLTACAHSGLV 383
TL+ +L++C S ++
Sbjct: 286 FTLSTLLSSCTDSSVL 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 275 LFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI 334
L + + ++ K VHA + + ++ + A+I TY KLGF A VF S ++V
Sbjct: 89 LSAQYHDVEVTKAVHA-SFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVS 147
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSG-IQPDQVTLTAVLTAC 377
+TA+I+ ++ AL ++ +M +G +QP++ T A+LTAC
Sbjct: 148 YTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 219/477 (45%), Gaps = 67/477 (14%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
+F ++ + P + TV+SV+ A S S + + K H ++ + D V ++
Sbjct: 250 MFFKMLELNVRPLNHTVSSVMLA-CSRSLAL-EVGKVIHAIAVKLSVVADTVVSTSVFDM 307
Query: 77 YCRCGEIGLARKVFDG-------------------------------MPERDTVSWNSMI 105
Y +C + AR+VFD MPER+ VSWN+M+
Sbjct: 308 YVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAML 367
Query: 106 GGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI 165
GGY ++E ++ ++ D VT+V ++ C D+ +G + HGF+ G
Sbjct: 368 GGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 166 EVDLPLCNAVIAMYAKCGSLDYARELFEEMSE-KDDVSYGSIISGYMAYGFVVKARDVFR 224
+ ++ + NA++ MY KCG+L A F +MSE +D+VS
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS---------------------- 464
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
WNAL++G+ + E A+ MQ KP+ TLA+ + + L
Sbjct: 465 ---------WNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNL 514
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA 344
GK +H + IR Y ++ + A++D Y+K A +VF +A +R L++W +II
Sbjct: 515 GKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCR 574
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
+G + L+ + + G++PD VT +L AC G V+ ++ F++M +KY I P VE
Sbjct: 575 NGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVE 634
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
Y CM+ + + G L + +F+ MP +P + + + Y + G +A L
Sbjct: 635 HYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 198/401 (49%), Gaps = 16/401 (3%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ A + NG+ + +F G+ + VLK+ + +++ HC V++
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL--ILDLRLLRQLHCAVVK 190
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G ++ +E ++V Y +C + AR+VFD + VSWN ++ Y + GF +E +
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
+ +ML + +V P T+ SVM AC +S L +G +H + + D + +V MY
Sbjct: 251 FFKMLEL-NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISG 240
KC L+ AR +F++ KD S+ S +SGY G +AR++F M + +WNA++ G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQN 300
V + ++ A+D + M+ + VTL + + S S+++ GK+ H + R YD N
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 301 IYVATAIIDTYAKLGFIHGARQVFDQ-ARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
+ VA A++D Y K G + A F Q + R V W A++T A G + AL + M
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ 489
Query: 360 DSGIQPDQVTLTAVLTACA-----------HSGLVDEAWKI 389
+P + TL +L CA H L+ + +KI
Sbjct: 490 VEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 48/428 (11%)
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
IF+ N + Y +CG + AR++F+ MPERD SWN++I +Q G +E R++ M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 127 VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
G V + V+++CG DL L ++H V + G ++ L +++ +Y KC +
Sbjct: 156 DG-VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
AR +F+E+ DVS+ I+ Y+ GF
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGF------------------------------- 243
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
+ A+ + +M ++P T++S + S L GK +HA A++ + V+T+
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
+ D Y K + AR+VFDQ RS+ L WT+ ++ YA G A L+ M + I
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI--- 360
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS------ 420
V+ A+L H+ DEA M + I+ + +V +L+ +S
Sbjct: 361 -VSWNAMLGGYVHAHEWDEALDFLTLMRQE--IENI--DNVTLVWILNVCSGISDVQMGK 415
Query: 421 EAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYS 480
+A FI + + ALL+ G +++ + E+ E S N ++ +
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG--VA 473
Query: 481 CAGRWEEA 488
GR E+A
Sbjct: 474 RVGRSEQA 481
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 147/335 (43%), Gaps = 46/335 (13%)
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPG 230
L N I Y KCG +D ARELFE E P
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFE---------------------------------EMPE 124
Query: 231 LD--TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
D +WNA+I+ QN + + R M G++ + A + +LR +++
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDA 348
H ++ Y N+ + T+I+D Y K + AR+VFD+ + S V W I+ Y G
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A+ ++ +ML+ ++P T+++V+ AC+ S L E K+ + + K +
Sbjct: 245 DEAVVMFFKMLELNVRPLNHTVSSVMLACSRS-LALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 409 MVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPES 468
+ + + +L E+A+ + + K+W + ++G ++ G + LF++ PE
Sbjct: 304 VFDMYVKCDRL-ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAR----ELFDLMPER 358
Query: 469 S-GNYIIMANLYSCAGRWEEA----SRVRKRMEEI 498
+ ++ M Y A W+EA + +R+ +E I
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 249/509 (48%), Gaps = 44/509 (8%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+L + G + L +++ G++ + T +++ + Y K+ H V++
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG--KQLHSLVVK 241
Query: 61 RGLE-TDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR 119
G ++IFV N LV Y CG++ + + F+ +PE+D +SWNS++ + G +
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD-LPLCNAVIAM 178
L+ +M G P +S + C ++ D+ G ++H +V + G +V L + +A+I M
Sbjct: 302 LFSKMQFWGKR-PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALI 238
Y KC ++ + L++ + + L+ N+L+
Sbjct: 361 YGKCNGIENSALLYQSLPCLN-------------------------------LECCNSLM 389
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF--SNLRGGKEVHAYAIRRC 296
+ ++ + I++ M G + VTL++ + S +L VH AI+
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSG 449
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
Y ++ V+ ++ID Y K G +R+VFD+ + ++ T+II YA +G + + +
Sbjct: 450 YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLR 509
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRA 416
+M + PD+VT+ +VL+ C+HSGLV+E IF+++ SKYGI P + YACMV +L RA
Sbjct: 510 EMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRA 569
Query: 417 GKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMA 476
G + +A + + + + AW +LL ++ + G+ A + L +EPE+ YI ++
Sbjct: 570 GLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVS 629
Query: 477 NLYSCAGRWEEASRV------RKRMEEIG 499
Y G +E + ++ R+ M EIG
Sbjct: 630 KFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 223/523 (42%), Gaps = 87/523 (16%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
++L+A V G+ + T SVL + F + + HC V+ G ++FV +ALV
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFC--REGIQVHCRVISLGFGCNMFVRSALV 154
Query: 75 TCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
Y + +A K+FD M +R+ N ++ + Q G + +Y+ M + V +G
Sbjct: 155 GLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM-ELEGVAKNG 213
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEV-DLPLCNAVIAMYAKCGSLDYARELFE 193
+T +++ C + + G ++H V +SG + ++ + N ++ Y+ CG L + F
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN 273
Query: 194 EMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDL 253
+ EKD +S+ SI+S YG V+ + D+F
Sbjct: 274 AVPEKDVISWNSIVSVCADYGSVLDSLDLF------------------------------ 303
Query: 254 VREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-QNIYVATAIIDTYA 312
+MQ G +P+ S + S S+++ GK++H Y ++ +D +++V +A+ID Y
Sbjct: 304 -SKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYG 362
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
K I + ++ +L +++T+ G + ++ M+D G D+VTL+
Sbjct: 363 KCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLST 422
Query: 373 VLTA-----------------CA--------------------HSGLVDEAWKIFNTMHS 395
VL A CA SG + + K+F+ + +
Sbjct: 423 VLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT 482
Query: 396 K--YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGD 450
+ + ++ YA R G ++ K + EM + P ++L+G S G
Sbjct: 483 PNIFCLTSIINGYA-------RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGL 535
Query: 451 VETGKFACDHLFEIEPESSGN--YIIMANLYSCAGRWEEASRV 491
VE G+ D L S G Y M +L AG E+A R+
Sbjct: 536 VEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 33/324 (10%)
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
++ N + + G + A + FD M RD V++N +I G S+ G LY EM+S
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 127 VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
G + T SV+ C G++VH V G ++ + +A++ +YA +D
Sbjct: 106 CG-LRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 187 YARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNW 246
A +LF+EM +++ L N L+ Q
Sbjct: 165 VALKLFDEMLDRN-------------------------------LAVCNLLLRCFCQTGE 193
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-QNIYVAT 305
+ ++ M+ G+ N +T I S+ + GK++H+ ++ ++ NI+VA
Sbjct: 194 SKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVAN 253
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
++D Y+ G + G+ + F+ + ++ W +I++ A +G +L L+++M G +P
Sbjct: 254 VLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP 313
Query: 366 DQVTLTAVLTACAHSGLVDEAWKI 389
+ L C+ + + +I
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQI 337
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 192 FEEMSEKDDV-SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
F E + D V ++ I + G ++ A + F M + T+N LISG + A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
I+L EM GL+ +A T S + + S R G +VH I + N++V +A++
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGL 156
Query: 311 YAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
YA L + A ++FD+ R+L + ++ + G++ +Y +M G+ + +T
Sbjct: 157 YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTY 216
Query: 371 TAVLTACAHSGLVDEAWKIFN-TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM 429
++ C+H LV E ++ + + S + I + +V S G LS + + + +
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANV-LVDYYSACGDLSGSMRSFNAV 275
Query: 430 PIEPSAKAWGALLNGASVYGDV 451
P E +W ++++ + YG V
Sbjct: 276 P-EKDVISWNSIVSVCADYGSV 296
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 218/442 (49%), Gaps = 56/442 (12%)
Query: 89 VFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV----PDGVTIVSVMQAC 144
VF D +N+++ +C E+ R++ S S++ V ++
Sbjct: 66 VFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 145 GQSKDLVLGMEVHGFVNESGIEVDLPLC-NAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
S L +G VHG V + G + L ++ YAK G L YAR++F+EM E+ V
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSV-- 179
Query: 204 GSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQ-----NNWFEGAIDLVREMQ 258
TWNA+I G N+ A+ L R
Sbjct: 180 -----------------------------TWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 259 --GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY--DQNIYVATAIIDTYAKL 314
GSG++P T+ + S L G VH Y + + + ++++ TA++D Y+K
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 315 GFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
G ++ A VF+ + +++ WT++ T A +G + L +M +SGI+P+++T T++L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
+A H GLV+E ++F +M +++G+ P++E Y C+V +L +AG++ EA +FI MPI+P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 435 AKAWGALLNGASVYGDVETGKFACDHLFEIEPES---SG----NYIIMANLYSCAGRWEE 487
A +L N S+YG+ G+ L EIE E SG +Y+ ++N+ + G+W E
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 488 ASRVRKRMEEIGVHKIRGSSWI 509
++RK M+E + G S++
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 158/383 (41%), Gaps = 93/383 (24%)
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKR-------L 120
+ L+ Y + G++ ARKVFD MPER +V+WN+MIGGY C ++ L
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY--CSHKDKGNHNARKAMVL 205
Query: 121 YMEMLSVGS-VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGI--EVDLPLCNAVIA 177
+ GS V P T+V V+ A Q+ L +G VHG++ + G EVD+ + A++
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
MY+KCG L+ A +FE M K ++VF TW ++
Sbjct: 266 MYSKCGCLNNAFSVFELM----------------------KVKNVF---------TWTSM 294
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
+G+ N +L+ M SG+KPN +T
Sbjct: 295 ATGLALNGRGNETPNLLNRMAESGIKPNEITF---------------------------- 326
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAA----HGDASLALG 353
T+++ Y +G + ++F ++R V T +I Y G A
Sbjct: 327 -------TSLLSAYRHIGLVEEGIELFKSMKTRFGV--TPVIEHYGCIVDLLGKAGRIQE 377
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSG---LVDEAWKIFNTMHSK----YGIQPLVEQY 406
Y +L I+PD + L ++ AC+ G + +E K + + G + E Y
Sbjct: 378 AYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSE--CEDY 435
Query: 407 ACMVGVLSRAGKLSEAAKFISEM 429
+ VL+ GK E K EM
Sbjct: 436 VALSNVLAHKGKWVEVEKLRKEM 458
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 190/359 (52%), Gaps = 35/359 (9%)
Query: 28 PDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLAR 87
P+ FTV S+LKA + + ++ H V++R ++TD+FV +L+ Y +CGEI R
Sbjct: 282 PNEFTVCSILKACSEEKALRFG--RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 88 KVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQS 147
KVFDGM R+TV+W S+I +++ GF EE L+ ++ ++ + +T+VS+++ACG
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACGSV 398
Query: 148 KDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSII 207
L+LG E+H + ++ IE ++ + + ++ +Y KCG A + +++ +D VS+ ++I
Sbjct: 399 GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI 458
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
SG + G + A+D ++EM G++PN
Sbjct: 459 SGCSSLGHESE-------------------------------ALDFLKEMIQEGVEPNPF 487
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T +S + + +L G+ +H+ A + N++V +A+I YAK GF+ A +VFD
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
++LV W A+I YA +G AL L +M G + D +L+ C L DEA
Sbjct: 548 PEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL-DEA 605
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 208/430 (48%), Gaps = 40/430 (9%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGE 82
D S DS V L A S + + +K H L+ + I+ N L++ R G+
Sbjct: 73 DDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGD 132
Query: 83 IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ ARKVFD MPE++TV+W +MI GY + G +E L+ + + G + V ++
Sbjct: 133 LVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
C + + LG +VHG + + G+ +L + ++++ YA+CG L A F+ M EKD +S
Sbjct: 193 LCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVIS 251
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGL 262
+ ++IS G +KA +F GM N+WF
Sbjct: 252 WTAVISACSRKGHGIKAIGMFIGM----------------LNHWF--------------- 280
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQ 322
PN T+ S + S LR G++VH+ ++R +++V T+++D YAK G I R+
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 323 VFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGL 382
VFD +R+ V WT+II A+A G A+ L+ M + + +T+ ++L AC G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG- 399
Query: 383 VDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWG 439
A + +H+ K I+ V + +V + + G+ +A + ++P +W
Sbjct: 400 ---ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWT 455
Query: 440 ALLNGASVYG 449
A+++G S G
Sbjct: 456 AMISGCSSLG 465
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 194/387 (50%), Gaps = 40/387 (10%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
++ VE++LV Y +CGE+ A + FD M E+D +SW ++I S+ G + +++ ML
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
+ +P+ T+ S+++AC + K L G +VH V + I+ D+ + +++ MYAKCG
Sbjct: 277 N-HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG-- 333
Query: 186 DYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNN 245
E+S+ R VF GM N TW ++I+ +
Sbjct: 334 --------EISD---------------------CRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
+ E AI L R M+ L N +T+ S + L GKE+HA I+ ++N+Y+ +
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
++ Y K G A V Q SR +V WTA+I+ ++ G S AL +M+ G++P
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 366 DQVTLTAVLTACAHSGLVDEAWKIFNTMHS---KYGIQPLVEQYACMVGVLSRAGKLSEA 422
+ T ++ L ACA+S E+ I ++HS K V + ++ + ++ G +SEA
Sbjct: 485 NPFTYSSALKACANS----ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Query: 423 AKFISEMPIEPSAKAWGALLNGASVYG 449
+ MP E + +W A++ G + G
Sbjct: 541 FRVFDSMP-EKNLVSWKAMIMGYARNG 566
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 3/232 (1%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ A++ G + LF + ++ TV S+L+A S KE H +++
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG--KELHAQIIK 413
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
+E ++++ + LV YC+CGE A V +P RD VSW +MI G S G E
Sbjct: 414 NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
EM+ G V P+ T S ++AC S+ L++G +H ++ ++ + +A+I MYA
Sbjct: 474 LKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
KCG + A +F+ M EK+ VS+ ++I GY GF +A + ME G +
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIA-SPSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
LD + G+ P+ FT +S LKA A S S + + H + +++FV +AL
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI---HSIAKKNHALSNVFVGSAL 527
Query: 74 VTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPD 133
+ Y +CG + A +VFD MPE++ VSW +MI GY++ GF E +L M + G V D
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 134 GVTIVSVMQACG 145
+ +++ CG
Sbjct: 588 YI-FATILSTCG 598
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 200/440 (45%), Gaps = 28/440 (6%)
Query: 101 WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV 160
+N+++ ++ G +E K++YMEML V P+ T ++ + ++ + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLE-DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 161 NESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFV 216
E+G++ D ++I Y + LD A ++F EM +++V+Y +I G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 217 VKARDVFRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
+A D+F M++ P + T+ LI + + A++LV+EM+ +G+KPN T
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
I +E+ + + N+ A+I+ Y K G I A V + SR L
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 333 V----IWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWK 388
+ +I Y + A+G+ +ML+ + PD VT +++ SG D A++
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 389 IFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGA 445
+ + M+ + G+ P Y M+ L ++ ++ EA + + P+ + AL++G
Sbjct: 484 LLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 446 SVYGDVETGKFACDHLFEIE--PESSGNYIIMANLYSCA-GRWEEASRVRKRMEEIGVHK 502
G V+ + + P S ++ L CA G+ +EA+ + ++M +IG+
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL--CADGKLKEATLLEEKMVKIGLQP 600
Query: 503 IRGSSWIEMSGRLIAFIAKD 522
+ I LI + KD
Sbjct: 601 TVSTDTI-----LIHRLLKD 615
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 210/514 (40%), Gaps = 76/514 (14%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFV---LRRGLET 65
GL + ++ ++ + P+ +T ++ + V+EA+ +V + GL+
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG-----YCKLGNVEEANQYVSKIVEAGLDP 251
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLY 121
D F +L+ YC+ ++ A KVF+ MP R+ V++ +I G +E L+
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSK-----DLVLGMEVHGFVNESGIEVDLPLCNAVI 176
++M V + CG + +LV ME E+GI+ ++ +I
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME------ETGIKPNIHTYTVLI 365
Query: 177 AMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN---- 228
+ AREL +M EK + ++Y ++I+GY G + A DV ME+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 229 ----------------------------------PGLDTWNALISGMVQNNWFEGAIDLV 254
P + T+N+LI G ++ F+ A L+
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
M GL P+ T S I + ++ ++ + N+ + TA+ID Y K
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 315 GFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
G + A + ++ S++ + + A+I A G A L +M+ G+QP T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
T ++ G D A+ F M S G +P Y + R G+L +A +++M
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 431 ---IEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+ P + +L+ G YGD+ FA D L
Sbjct: 665 ENGVSPDLFTYSSLIKG---YGDLGQTNFAFDVL 695
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 230/544 (42%), Gaps = 52/544 (9%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
L+L + GI P+ T T ++ ++ S ++ +E +L +GL ++ NAL+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQC--KFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 75 TCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
YC+ G I A V + M R +T ++N +I GY + ++ L +ML V
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN-KMLE-RKV 458
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
+PD VT S++ +S + + +N+ G+ D ++I K ++ A +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 191 LFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMV 242
LF+ + +K + V Y ++I GY G V +A + M + P T+NALI G+
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA-----IRRCY 297
+ + A L +M GL+P T TI + L+ G HAY+ +
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVST--DTILIHRL---LKDGDFDHAYSRFQQMLSSGT 633
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQAR----SRSLVIWTAIITAYAAHGDASLALG 353
+ + T I TY + G + A + + R S L ++++I Y G + A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVL 413
+ +M D+G +P Q T ++ I + + KYG Q E C + +
Sbjct: 694 VLKRMRDTGCEPSQHTFLSL---------------IKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 414 SRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYI 473
+ E + + E + P+AK++ L+ G G++ + DH+ E S +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 474 IMANLYSCA--GRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEI 531
A L C + EA++V M +G +E LI + K ER +
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVG-----HLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 532 YTYL 535
+ L
Sbjct: 854 FQNL 857
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 183/444 (41%), Gaps = 51/444 (11%)
Query: 6 SFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL----RR 61
+F+ YR LL L D G+ PD +T TS++ ++ K V+EA C + ++
Sbjct: 477 NFDSAYR-LLSLMN---DRGLVPDQWTYTSMIDSLCKS-----KRVEEA-CDLFDSLEQK 526
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEEC 117
G+ ++ + AL+ YC+ G++ A + + M ++ ++++N++I G G +E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L +M+ +G + P T ++ + D + SG + D I
Sbjct: 587 TLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----P 229
Y + G L A ++ +M E D +Y S+I GY G A DV + M + P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 230 GLDTWNALISGMVQNNW------------------FEGAIDLVREMQGSGLKPNAVTLAS 271
T+ +LI +++ + F+ ++L+ +M + PNA +
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRR-CYDQNIYVATAIIDTYAKLGFIHGARQVFDQ---- 326
I NLR ++V + R + V A++ KL + A +V D
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 327 ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
L +I G+ ++ +L G D++ ++ GLV+
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 387 WKIFNTMHSKYGIQPLVEQYACMV 410
+++FN M K G + + Y+ ++
Sbjct: 886 YELFNVME-KNGCKFSSQTYSLLI 908
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 111/198 (56%), Gaps = 3/198 (1%)
Query: 275 LFSYFSNLRG---GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
LF +NL+ K+VH + ++ + + + +I + + I A++VFD +
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
+ W ++ AY+ +G AL L+ +M G++P++ T V ACA G ++EA+ F+
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDV 451
+M +++GI P E Y ++GVL + G L EA ++I ++P EP+A W A+ N A ++GD+
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 452 ETGKFACDHLFEIEPESS 469
+ + + + +++P +
Sbjct: 422 DLEDYMEELMVDVDPSKA 439
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 106/271 (39%), Gaps = 45/271 (16%)
Query: 118 KRLY---MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNA 174
+RLY +E+L G++ PD V + ++C K L +VH +S D L N
Sbjct: 218 RRLYKDAIELLDKGAM-PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 175 VIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTW 234
VI+M+ +C S+ A+ +F+ M +KD +D+W
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKD-------------------------------MDSW 305
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
+ ++ N + A+ L EM GLKPN T + +F + + G +E +
Sbjct: 306 HLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLT---VFLACATVGGIEEAFLHFDS 362
Query: 295 RCYDQNIYVAT----AIIDTYAKLGFIHGARQ-VFDQARSRSLVIWTAIITAYAAHGDAS 349
+ I T ++ K G + A Q + D + W A+ HGD
Sbjct: 363 MKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDID 422
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
L + M+D + P + + + T S
Sbjct: 423 LEDYMEELMVD--VDPSKAVINKIPTPPPKS 451
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 10 LYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFV 69
LY+ ++L +D G PD + ++ A+ + K+ H L+ D +
Sbjct: 220 LYKDAIEL----LDKGAMPDRECFVLLFESCAN--LKSLEHSKKVHDHFLQSKFRGDPKL 273
Query: 70 ENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
N +++ + C I A++VFD M ++D SW+ M+ YS G ++ L+ EM G
Sbjct: 274 NNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG- 332
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGME---VH--GFVNESGIEVDLPLCNAVIAMYAKCGS 184
+ P+ T ++V AC V G+E +H NE GI V+ + KCG
Sbjct: 333 LKPNEETFLTVFLACA----TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 185 L----DYAREL-FEEMSE 197
L Y R+L FE ++
Sbjct: 389 LVEAEQYIRDLPFEPTAD 406
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 181/409 (44%), Gaps = 21/409 (5%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEEC 117
G+ +I+ N ++ C+CRC + A V + E DT ++N++I G G E
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L M+ G PD VT S++ +S D L +++ + E ++ D+ + +I
Sbjct: 178 VVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGF----VVKARDVFRGMENP 229
+ G +D A LF+EM K V+Y S++ G G + +D+ P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ T+N L+ V+ + A +L +EM G+ PN +T + + + + L +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAH 345
+R +I T++I Y + + +VF R L V ++ ++ +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
G LA L+ +M+ G+ PD +T +L +G +++A +IF + K + +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ-KSKMDLGIVM 475
Query: 406 YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDV 451
Y ++ + + GK+ +A +P ++P+ + +++G G +
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 183/424 (43%), Gaps = 26/424 (6%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR---RGLETDIFVENALVTCYCRCG 81
G PD+ T +++K + V EA V R G + D+ N++V CR G
Sbjct: 153 GYEPDTTTFNTLIKGLFLEG-----KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 82 EIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
+ LA + M ER D +++++I + G + L+ EM + G + VT
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-IKSSVVTY 266
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
S+++ ++ G + + I ++ N ++ ++ K G L A EL++EM
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 198 K----DDVSYGSIISGYMAYGFVVKARDVF----RGMENPGLDTWNALISGMVQNNWFEG 249
+ + ++Y +++ GY + +A ++ R +P + T+ +LI G +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 250 AIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIID 309
+ + R + GL NAVT + + F ++ +E+ + ++ ++D
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 310 TYAKLGFIHGARQVF-DQARSR---SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQP 365
G + A ++F D +S+ +V++T II G A L+ + G++P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 366 DQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF 425
+ +T T +++ G + EA + M G P Y ++ R G L+ +AK
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 426 ISEM 429
I EM
Sbjct: 566 IEEM 569
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 21/276 (7%)
Query: 16 DLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHC---FVLRRGLETDIFVENA 72
+L+ + GISP+ T +++ + + EA+ ++R DI +
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDG-----YCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 73 LVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
L+ YC + KVF + +R + V+++ ++ G+ Q G + + L+ EM+S G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 129 SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
V+PD +T ++ + L +E+ + +S +++ + + +I K G ++ A
Sbjct: 434 -VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 189 RELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISG 240
LF + K + ++Y +ISG G + +A + R ME P T+N LI
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 241 MVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
+++ + L+ EM+ G +A ++ I +
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 18/236 (7%)
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
+++ R P L ++ S + + F +D ++++ +G+ N TL I F
Sbjct: 77 QEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC-- 134
Query: 280 SNLRGGKEVHAYAIR-RCYDQNIYVATAIIDTYAKLGFIHG--------ARQVFDQARSR 330
R K AY++ + T +T K F+ G ++ +
Sbjct: 135 ---RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
+V + +I+ GD SLAL L +M + ++ D T + ++ + G +D A +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLN 443
M +K GI+ V Y +V L +AGK ++ A + +M I P+ + LL+
Sbjct: 252 KEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 188/396 (47%), Gaps = 35/396 (8%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
+F + ++ G P T T+++ A+ ++ + V + GL+ D + NA++
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQK--HFHSLLSLISKVEKNGLKPDTILFNAIINA 398
Query: 77 YCRCGEIGLARKVFDGMPE---RDTVS-WNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
G + A K+F+ M E + T S +N++I GY + G EE RL ML + P
Sbjct: 399 SSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQP 458
Query: 133 DGVTIVSVMQA-CGQSK-----DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
+ T ++QA C Q K ++V M+ +G ++ D+ N + YA+ GS
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG------VKPDVVTFNTLAKAYARIGSTC 512
Query: 187 YARELFEEMSEKDDV-----SYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNAL 237
A ++ + V + G+I++GY G + +A F M+ +P L +N+L
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
I G + N +G ++V M+ G+KP+ VT ++ + +S +++ +E++ +
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARS----RSLVIWTAIITAYAAHGDASLALG 353
D +I+ + + YA+ G A Q+ +Q R ++VI+T II+ + + G+ A+
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 354 LYAQMLD-SGIQPDQVTLTAVLTACAHSGLVDEAWK 388
+Y +M G+ P+ LT T G + WK
Sbjct: 693 VYKKMCGIVGLSPN---LTTYETLIWGFGEAKQPWK 725
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 135/357 (37%), Gaps = 60/357 (16%)
Query: 199 DDVSYGSIISGYMAYGFVVKARDVFRGM----ENPGLDTWNALISGMVQNNWFEGAIDLV 254
D S +++G + G +A +F + P L T+ L++ + + F + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
+++ +GLKP+ + + I S NL ++ +I Y K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 315 GFIHGARQVFD--------QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
G + + ++ D Q R+ I ++ A+ A + +M G++PD
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNI---LVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 367 QVTLTAVLTACAHSG--LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK 424
VT + A A G E I +H+K ++P V +V GK+ EA +
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 425 F--------------------------------------ISEMPIEPSAKAWGALLNGAS 446
F + E ++P + L+N S
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 447 VYGDVETGKFACDHLFE--IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
GD++ + + E I+P+ + I+A Y+ AG E+A ++ +M + GV
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHA-FSILAKGYARAGEPEKAEQILNQMRKFGVR 668
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 190/431 (44%), Gaps = 20/431 (4%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF S + + P + A+A Y V + G+E D++ ++
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTK--QYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 75 TCYCRCGEIGLARKVFDGM----PERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
CYCR ++ A V E DT+++++++ G+ G E L M+ +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD VT+ +++ + + + + E G + D V+ K G+ A +
Sbjct: 173 -PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 191 LFEEMSEKDD----VSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMV 242
LF +M E++ V Y +I G A +F ME G+ T+++LI G+
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIY 302
+ ++ ++REM G + P+ VT ++ I +F L KE++ I R +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGLYAQM 358
++ID + K +H A Q+FD S+ +V ++ +I +Y + L+ ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 359 LDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGK 418
G+ P+ +T ++ SG ++ A ++F M S+ G+ P V Y ++ L G+
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGE 470
Query: 419 LSEAAKFISEM 429
L++A + +M
Sbjct: 471 LNKALEIFEKM 481
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 179/447 (40%), Gaps = 67/447 (14%)
Query: 7 FNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAI-----ASPSFSYYKPVKEAHCFVLRR 61
G L L V+ G PD T VL + ++ + ++ ++E R
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-------R 239
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEEC 117
++ + + ++ C+ G A +F+ M + D V+++S+IGG G +++
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
++ EM+ +++PD VT +A+I
Sbjct: 300 AKMLREMIG-RNIIPDVVTF-----------------------------------SALID 323
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVF-----RGMEN 228
++ K G L A+EL+ EM + D ++Y S+I G+ + +A +F +G E
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE- 382
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
P + T++ LI+ + + + L RE+ GL PN +T + + F L KE+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV----IWTAIITAYAA 344
+ R ++ ++D G ++ A ++F++ + + I+ II
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
A L+ + D G++PD VT ++ G + EA +F M G P
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDF 561
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMPI 431
Y ++ L + + I EM +
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKV 588
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 15/274 (5%)
Query: 16 DLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVT 75
+L+ + GI+PD+ T S++ + + + ++ +G E DI + L+
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLH--EANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 76 CYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
YC+ + ++F + + +T+++N+++ G+ Q G K L+ EM+S G V
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VP 452
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P VT ++ + +L +E+ + +S + + + + N +I +D A L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 192 FEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQ 243
F +S+K D V+Y +I G G + +A +FR M+ G T+N LI +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
+ +++L+ EM+ G ++ T+ I + S
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 12/240 (5%)
Query: 216 VVKARDVFRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAS 271
V A D+F M P +N L S + + ++ + + M+ +G++ + T+
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 272 TIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ----A 327
I + L V A + Y+ + + +++ + G + A + D+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
+ LV + +I G S AL L +M++ G QPD+VT VL SG A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNG 444
+F M + I+ V QY+ ++ L + G +A +EM I+ + +L+ G
Sbjct: 231 DLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 176/410 (42%), Gaps = 68/410 (16%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFVENALVTCYCRCG 81
GISP+ T T ++K + Y EA +L+RG+E I ++L+ +C+CG
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIY-----EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 82 EI--GLAR-----------------KVFDGMPER--------------------DTVSWN 102
+ G A + DG+ ++ + V +N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA-------CGQSKDLVLGME 155
S+I G+ + ++E +++ ++ + + PD T +VM+ C K +G++
Sbjct: 501 SLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQ 558
Query: 156 VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM----SEKDDVSYGSIISGYM 211
+ + + I D+ +CN VI + KC ++ A + F + E D V+Y ++I GY
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 212 AYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
+ + +A +F ++ P T LI + +NN +GAI + M G KPNAV
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T + FS ++ G ++ + +I + IID K G + A +F QA
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 328 RSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
L V + +I Y G A LY ML +G++PD + A+
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 217/516 (42%), Gaps = 42/516 (8%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASP-----SFSYYKPVKEAHCFVLRRGLETDIFVEN 71
L + +D G +P+ T +++ +F +K +++ RG+E D+ +
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ-------RGIEPDLIAYS 325
Query: 72 ALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
L+ Y + G +G+ K+F + D V ++S I Y + G +Y ML
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G + P+ VT +++ Q + ++G + + G+E + +++I + KCG+L
Sbjct: 386 G-ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 188 ARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALIS 239
L+E+M + D V YG ++ G G ++ A M + +N+LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL------FSYFSNLRGGKEVHAYAI 293
G + N F+ A+ + R M G+KP+ T + + + F G ++
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ----ARSRSLVIWTAIITAYAAHGDAS 349
R +I V +I K I A + F+ +V + +I Y +
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A ++ + + P+ VTLT ++ + +D A ++F+ M K G +P Y C+
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCL 683
Query: 410 VGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVE--TGKFACDHLFEI 464
+ S++ + + K EM I PS ++ +++G G V+ T F ++
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 465 EPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
P+ Y I+ Y GR EA+ + + M GV
Sbjct: 744 LPDVVA-YAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 180/409 (44%), Gaps = 34/409 (8%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEEC 117
G+ FV +AL +C+ GE+ A + ER VS N ++ G S E
Sbjct: 216 GVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVA 270
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
RL +L G P+ VT +++ + ++ ++ + + GIE DL + +I
Sbjct: 271 SRLLSLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME----NP 229
Y K G L +LF + K D V + S I Y+ G + A V++ M +P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ T+ LI G+ Q+ A + ++ G++P+ VT +S I F NLR G ++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGF-IHGAR---QVFDQARSRSLVIWTAIITAYAAH 345
I+ Y ++ + ++D +K G +H R ++ Q+ ++V++ ++I +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTA-------CAHSGLVDEAWKIFNTMHSKYG 398
AL ++ M GI+PD T T V+ C H ++F+ M +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQ-RNK 567
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNG 444
I + ++ +L + ++ +A+KF + + +EP + ++ G
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 213/507 (42%), Gaps = 28/507 (5%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF + + P + + AIA Y V + +G+ +++ + ++
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTK--QYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 75 TCYCRCGEIGLA----RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
C+CRC ++ LA K+ E +T++++++I G G E L M+ +G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD +TI +++ S M + + E G + + V+ + K G A E
Sbjct: 191 -PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 191 LFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----WNALISGMV 242
L +M E+ D V Y II G +G + A ++F ME G+ T +N LI G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 243 Q-NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
W +GA L+R+M + PN VT + I F LR +E+H I R +
Sbjct: 310 NAGRWDDGA-KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGLYAQ 357
T++ID + K + A Q+ D S+ ++ + +I Y L L+ +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
M G+ D VT ++ G ++ A ++F M S+ + P + Y ++ L G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNG 487
Query: 418 KLSEAAKF---ISEMPIEPSAKAWGALLNGASVYGDVETG--KFACDHLFEIEPESSGNY 472
+ +A + I + +E + +++G V+ F L ++P Y
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP-GVKTY 546
Query: 473 IIMANLYSCAGRWEEASRVRKRMEEIG 499
IM G EA + ++MEE G
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G R +L + GI+PD+ T TS++ ++ + ++ +G + +I
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE--NHLDKANQMVDLMVSKGCDPNIR 404
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEM 124
N L+ YC+ I ++F M R DTV++N++I G+ + G K L+ EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
+S V P+ VT ++ + + +E+ + +S +E+D+ + N +I
Sbjct: 465 VS-RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 185 LDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNA 236
+D A +LF + K +Y +I G G + +A +FR ME G T+N
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
LI + + ++ L+ E++ G +A T+ I + S
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 213/505 (42%), Gaps = 59/505 (11%)
Query: 6 SFNGLYRHLLD----LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRR 61
S NGL LD LF V + P + +L AIA + + V +
Sbjct: 53 SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAK--MNKFDVVISLGEQMQNL 110
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEEC 117
G+ + + + L+ C+CR ++ LA V M E + V+ +S++ GY E
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L +M G P+ VT + L+ G+ +H +E+ +D
Sbjct: 171 VALVDQMFVTG-YQPNTVTFNT----------LIHGLFLHNKASEAMALID--------R 211
Query: 178 MYAK-CGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLD 232
M AK C + D V+YG +++G G A ++ ME PG+
Sbjct: 212 MVAKGC--------------QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+N +I G+ + + A++L +EM+ G++PN VT +S I + + +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDA 348
I R + +++ +A+ID + K G + A +++D+ R S+V ++++I + H
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A ++ M+ PD VT ++ V+E ++F M S+ G+ Y
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNI 436
Query: 409 MVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHL--FE 463
++ L +AG A + EM + P+ + LL+G G +E ++L +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 464 IEPESSGNYIIMANLYSCAGRWEEA 488
+EP + Y IM AG+ E+
Sbjct: 497 MEP-TIYTYNIMIEGMCKAGKVEDG 520
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 150/349 (42%), Gaps = 17/349 (4%)
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECK 118
LE + + N ++ C+ + A +F M + + V+++S+I G + +
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
RL +M+ + PD T +++ A + LV +++ + + I+ + +++I
Sbjct: 312 RLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 179 YAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD-- 232
+ LD A+++FE M K D V+Y ++I G+ Y V + +VFR M GL
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 233 --TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHA 290
T+N LI G+ Q + A ++ +EM G+ PN +T + + L V
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHG 346
Y R + IY +I+ K G + +F + +V + +I+ + G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
A L+ +M + G P+ ++ A G + + ++ M S
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 52/298 (17%)
Query: 213 YGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
+G +VK+R P + ++ L+S + + N F+ I L +MQ G+ N T +
Sbjct: 69 FGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL 332
I F C + +A A++ KLG+ ++
Sbjct: 123 INCF-------------------CRRSQLPLALAVLGKMMKLGY------------EPNI 151
Query: 333 VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNT 392
V ++++ Y S A+ L QM +G QP+ VT ++ EA + +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 393 MHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYG 449
M +K G QP + Y +V L + G A +++M +EP + +++G Y
Sbjct: 212 MVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 450 DVETGKFACDHLFEIEPESSG---NYIIMANLYSCA---GRWEEASRVRKRMEEIGVH 501
++ +LF+ E E+ G N + ++L SC GRW +ASR+ M E ++
Sbjct: 271 HMDDAL----NLFK-EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 193/447 (43%), Gaps = 56/447 (12%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGF 113
+L R L + N L+ YC+ G + KV + M E +++N+++ G + G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
E+ + + EM +G VPD T + ++ + V+ +SG++++ C+
Sbjct: 300 VEDAENVLKEMKDLG-FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 174 AVIAMYAKCGSLDYARELF-EEMSE---KDDVSYGSIISGYMAYGFVVKARDVFRGME-- 227
++ K G ++ A E+ EM++ ++V Y ++I GY G +V AR ME
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 228 -------------------------------------NPGLDTWNALISGMVQNNWFEGA 250
+P ++T+N LI G + F+
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
D+++EM+ +G PN V+ + I S L + V R + + +ID
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 311 YAKLGFIHGA----RQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
G I A +++ + +LV + +I + G S A L ++ G++PD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG-KLSEAAKF 425
T ++++ +G V ++ M + GI+P ++ Y ++ + ++ G +L+E +
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKTYHLLISLCTKEGIELTE--RL 655
Query: 426 ISEMPIEPSAKAWGALLNGASVYGDVE 452
EM ++P + +L+ +V+GD+E
Sbjct: 656 FGEMSLKPDLLVYNGVLHCYAVHGDME 682
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 16/318 (5%)
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK-- 198
+QA + D+ G+E+ + I + + N +I K ++ A +LF+EM +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 199 --DDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFEGAID 252
++Y ++I GY G K+ V M+ P L T+N L+ G+ + E A +
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
+++EM+ G P+A T + +S V+ A+ N Y + +++
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 313 KLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQV 368
K G I A ++ + ++ L VI+ +I Y GD A M G++PD +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 369 TLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
++ G ++ A K N M K G+ P VE Y ++G R + + + E
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 429 MP---IEPSAKAWGALLN 443
M P+ ++G L+N
Sbjct: 485 MEDNGTMPNVVSYGTLIN 502
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 185/452 (40%), Gaps = 82/452 (18%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS--------------------P 43
YS N L ++ ++VD+G+ +++T + +L A+ P
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 44 SFSYYKPVKEAHCF-------------VLRRGLETDIFVENALVTCYCRCGEIGLARKVF 90
+ Y + + +C + ++G++ D N L+ +C GE+ A K
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 91 DGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQ 146
+ M + ++N +IGGY + +++C + EM G++ P+ V+ +++ +
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCK 506
Query: 147 SKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD----YARELFEEMSEKDDVS 202
L+ V + + G+ + + N +I G ++ +++E+ ++ E + V+
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQ 258
Y ++I G G + +A D+ + GL T+N+LISG + I L EM+
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 259 GSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
SG+KP T I L C + I +
Sbjct: 627 RSGIKPTLKTYHLLISL--------------------CTKEGIELT-------------- 652
Query: 319 GARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
R + + L+++ ++ YA HGD A L QM++ I D+ T +++
Sbjct: 653 -ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 379 HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
G + E + + M+++ ++P + Y +V
Sbjct: 712 KVGKLCEVRSLIDEMNAR-EMEPEADTYNIIV 742
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 29/257 (11%)
Query: 23 DAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFVENALVTCYCR 79
D G+SP ++ S +++A F +L++G+E ++ N L+
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKG-----KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 80 CGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGV 135
G++ A + + + D ++NS+I GY G + C LY EM G + P
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG-IKPTLK 635
Query: 136 TIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T ++ C + G+E+ E ++ DL + N V+ YA G ++ A L ++
Sbjct: 636 TYHLLISLCTKE-----GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 195 MSEK----DDVSYGSIISGYMAYGFVVKARDVF-----RGMENPGLDTWNALISGMVQNN 245
M EK D +Y S+I G + G + + R + R ME P DT+N ++ G +
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME-PEADTYNIIVKGHCEVK 749
Query: 246 WFEGAIDLVREMQGSGL 262
+ A REMQ G
Sbjct: 750 DYMSAYVWYREMQEKGF 766
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 29/447 (6%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGF 113
+++ G E DI ++L+ YC I A + D M E DT ++ ++I G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
E L +M+ G PD VT +V+ + D+ L + + + + I+ ++ + N
Sbjct: 204 ASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 174 AVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME-- 227
+I K ++ A +LF EM K + V+Y S+I+ YG A + M
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 228 --NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
NP + T+NALI + A L EM + P+ +T I F + L
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV----IWTAIITA 341
K++ + + + NI +I+ + K + ++F + R LV +T II
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+ GD A ++ QM+ + + D +T + +L G +D A IF + K ++
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ-KSEMEL 501
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+ Y M+ + +AGK+ EA + I+P + +++G ++ D L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA----DDL 557
Query: 462 FEIEPE-----SSGNY--IIMANLYSC 481
F E +SG Y +I ANL C
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDC 584
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 187/468 (39%), Gaps = 50/468 (10%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF V + P +L A+A + ++ V + G+ D++ + +
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAK--MNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 75 TCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
C+CR ++ LA V M E D V+ +S++ GY + L +M+ +G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-Y 184
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD T + L+ G+ +H +E+ VD +
Sbjct: 185 KPDTFTFTT----------LIHGLFLHNKASEAVALVD---------------------Q 213
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNW 246
+ + + D V+YG++++G G + A ++ ME + +N +I + +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
E A+DL EM+ G++PN VT S I + + + + + + N+ A
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ID + K G + A ++ ++ RS+ + + +I + H A ++ M+
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
P+ T ++ V++ ++F M S+ G+ Y ++ +AG A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 423 AKFISEM---PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE 467
+M + + LL+G YG ++T +L + E E
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 129/260 (49%), Gaps = 16/260 (6%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
+ I PD+ T ++ + K+ F++ + +I N L+ +C+C
Sbjct: 355 IQRSIDPDTITYNLLINGFCM--HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 82 EIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
+ ++F M +R +TV++ ++I G+ Q G + + ++ +M+S + VP +
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS--NRVPTDIMT 470
Query: 138 VSVMQ--ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM 195
S++ C K L + + ++ +S +E+++ + N +I K G + A +LF +
Sbjct: 471 YSILLHGLCSYGK-LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 196 SEKDDV-SYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNNWFEGA 250
S K DV +Y ++ISG + + +A D+FR M+ P T+N LI +++ +
Sbjct: 530 SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 251 IDLVREMQGSGLKPNAVTLA 270
+L++EM+ SG +A T++
Sbjct: 590 AELIKEMRSSGFVGDASTIS 609
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVK--EAHCFVLRRGLETDIFVENALV 74
L ++ ++ I+P+ T +++ A F K V+ + H +++R ++ D N L+
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAF----FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 75 TCYCRCGEIGLARKVFDGMPERDTV----SWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+C + A+++F M +D + ++N++I G+ +C E+ L+ EM G +
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG-L 429
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V + VT +++Q Q+ D V + + + D+ + ++ G LD A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 191 LFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGME-NPGLDTWNALISGMVQNN 245
+F+ + E + Y ++I G G V +A D+F + P + T+N +ISG+
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTI 273
+ A DL R+M+ G PN+ T + I
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 115/296 (38%), Gaps = 48/296 (16%)
Query: 213 YGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLAST 272
+G +VK+R P + +N L+S + + N FE I L +MQ G+ + T +
Sbjct: 71 FGDMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 273 IPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ----AR 328
I F S L V A ++ Y+ +I +++++ Y I A + DQ
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 329 SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWK 388
+T +I H AS A+ L QM+ G QPD VT V+ G +D A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 389 IFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGA 445
+ N M + I+ V + ++ L + + A +EM I P+ + +L+N
Sbjct: 245 LLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 446 SVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
YG RW +ASR+ M E ++
Sbjct: 304 CNYG----------------------------------RWSDASRLLSNMLEKKIN 325
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 201/464 (43%), Gaps = 33/464 (7%)
Query: 5 YSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL-RRGL 63
+ NG L+ + G++P F V ++++ + K K L
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG-------WLKGQKHEEALKLFDESF 436
Query: 64 ET---DIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEE 116
ET ++FV N +++ C+ G+ A ++ M R + VS+N+++ G+ + +
Sbjct: 437 ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
+ ++ +L G + P+ T ++ C ++ D +EV + S IEV+ + +I
Sbjct: 497 ARIVFSNILEKG-LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 177 AMYAKCGSLDYARELFEEMSEKDDV-----SYGSIISGYMAYGFVVKARDVFRGM----E 227
K G AREL M E+ + SY SII G+ G + A + M
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+P + T+ +L++G+ +NN + A+++ EM+ G+K + + I F SN+
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV----IWTAIITAYA 343
+ + + + + + ++I + LG + A ++ + L +T +I
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLV 403
G+ LA LY +M G+ PD++ T ++ + G + K+F M K + P V
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK-KNNVTPNV 794
Query: 404 EQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNG 444
Y ++ R G L EA + EM I P + L++G
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 186/416 (44%), Gaps = 62/416 (14%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGM----PERDTVSWNSMIGGYSQCGF 113
+L G+ ++ +L+T +C+ ++ A +FD M P ++V+++ +I + + G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQA--CGQSKDLVLGMEVHGFVNESGIEVDLPL 171
E+ Y +M +G + P + +++Q GQ + L + F E+G+ ++ +
Sbjct: 390 MEKALEFYKKMEVLG-LTPSVFHVHTIIQGWLKGQKHEEALKLFDESF--ETGL-ANVFV 445
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME 227
CN +++ K G D A EL +M + + VSY +++ G+ + AR VF +
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 228 NPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
GL T++ LI G +N+ + A+++V M S ++ N V
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV---------------- 549
Query: 284 GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF-DQARSRSLVI----WTAI 338
V II+ K+G AR++ + + L + + +I
Sbjct: 550 -------------------VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
I + G+ A+ Y +M +GI P+ +T T+++ + +D+A ++ + M +K G
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-G 649
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDV 451
++ + Y ++ + + A+ SE+ + PS + +L++G G++
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 206/497 (41%), Gaps = 58/497 (11%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
++ + ++ GI P T ++L + + V + + RR +E N L+
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAG--DLERVDKIWLEMKRRNIEFSEVTYNILING 282
Query: 77 YCRCGEIGLARKVFDGMPERD-----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
+ + G++ AR+ F G R S+N +I GY + G +++ + EML+ G +
Sbjct: 283 FSKNGKMEEARR-FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG-IY 340
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P T N I G +D AREL
Sbjct: 341 PTTSTY-----------------------------------NIYICALCDFGRIDDAREL 365
Query: 192 FEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWF 247
M+ D VSY +++ GY+ G V+A +F + +P + T+N LI G+ ++
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
EGA L EM + P+ +T + + F NL EV+ +R+ + Y T
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 308 IDTYAKLGFIHGARQVFDQA-----RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+LG A ++ ++ + L I+ I G+ A+ ++ G
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
+ PD VT T V+ +G A +++ M K + P V Y ++ ++AG+L +A
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 423 AKFISEMP---IEPSAKAWGALLNGASVYGDV-ETGKFACDHLFEIEPESSGNYIIMANL 478
++ +EM + P+ ALL G G++ E ++ C E P + +Y ++ +
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 479 YSCAGRWEEASRVRKRM 495
+WEE ++ K M
Sbjct: 665 NCDFEKWEEVVKLYKEM 681
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 153/388 (39%), Gaps = 53/388 (13%)
Query: 71 NALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
N + C G I AR++ M D VS+N+++ GY + G + E L+ + L G +
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF-DDLRAGDI 405
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
P VT +++ +S +L + + I D+ ++ + K G+L A E
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 191 LFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGM-----ENPGLDTWNALISGM 241
+++EM K D +Y + G + G KA + M P L +N I G+
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNI 301
+ AI+ R++ GL P+ VT
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTY-------------------------------- 553
Query: 302 YVATAIIDTYAKLGFIHGARQVFDQA-RSR---SLVIWTAIITAYAAHGDASLALGLYAQ 357
T +I Y + G AR ++D+ R R S++ + +I +A G A +
Sbjct: 554 ---TTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
M G++P+ +T A+L +G +DEA++ M + GI P Y ++
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLISKNCDFE 669
Query: 418 KLSEAAKFISEM---PIEPSAKAWGALL 442
K E K EM IEP AL
Sbjct: 670 KWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 185/454 (40%), Gaps = 55/454 (12%)
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+Y M+ G ++P +T +++ +C ++ DL ++ + IE N +I +
Sbjct: 225 VYETMIEHG-IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGF 283
Query: 180 AKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGL---- 231
+K G ++ AR +M S+ +I GY G A V M N G+
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVT----------LASTIPLFSYFSN 281
T+N I + G ID RE+ S P+ V+ + + F +
Sbjct: 344 STYNIYICALCDF----GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTA 337
LR G ++H +I +ID + G + GA+++ ++ ++ ++ +T
Sbjct: 400 LRAG-DIHP---------SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY 397
++ + +G+ S+A +Y +ML GI+PD T G D+A+++ M +
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKF---ISEMPIEPSAKAWGALLNGASVYGDVETG 454
P + Y + L + G L +A +F I + + P + ++ G G +
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 455 KFACDHLF--EIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMS 512
+ D + + P S Y ++ ++ AGR E+A + M K RG M+
Sbjct: 570 RNLYDEMLRKRLYP-SVITYFVLIYGHAKAGRLEQAFQYSTEM------KKRGVRPNVMT 622
Query: 513 GRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEG 546
+ + N DE Y YL C M EEG
Sbjct: 623 HNALLYGMCKAGN--IDEAYRYL----CKMEEEG 650
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 28/331 (8%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDT----VSWNSMIGGYSQCGFYEECKRLY 121
D+ N L+ Y + G+ A +FD + D V++N++I G + G E +RL
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
EM + + PD +T ++++ ++ +L + EV+ + GI+ D +
Sbjct: 433 EEM-TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 182 CGSLDYARELFEEMSEKD----DVS-YGSIISGYMAYGFVVKA----RDVFRGMENPGLD 232
G D A L EEM D D++ Y I G G +VKA R +FR P
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
T+ +I G ++N F+ A +L EM L P+ +T I + + + G+ A+
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI-----YGHAKAGRLEQAFQ 606
Query: 293 I-----RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYA 343
+R N+ A++ K G I A + + + +T +I+
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 344 AHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
+ LY +MLD I+PD T A+
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 190/435 (43%), Gaps = 32/435 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR---RGLETDIFVENAL 73
L V+ G PD+ T T+++ + + EA V R RG + ++ +
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLF-----LHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 74 VTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
V C+ G+I LA + + M E D V +N++I + ++ L+ EM + G
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 215
Query: 130 VVPDGVT---IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
+ P+ VT ++S + + G+ D ++ + E I +L NA+I + K G
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 187 YARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALI 238
A +L ++M ++ D +Y S+I+G+ + + KA+ +F M + P LDT+N LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
G ++ E +L REM GL + VT + I + + ++V +
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGL 354
+I + ++D G + A +VFD + + I+T +I G L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ + G++P+ VT +++ L+ EA+ + M G P Y ++
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPDSGTYNTLIRAHL 511
Query: 415 RAGKLSEAAKFISEM 429
R G + +A+ I EM
Sbjct: 512 RDGDKAASAELIREM 526
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/526 (21%), Positives = 215/526 (40%), Gaps = 92/526 (17%)
Query: 28 PDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLA 86
P F +L AIA F + E + R G+ +++ N L+ C+CR +I LA
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEK---MQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 87 RKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQ 142
+ M E V+ +S++ GY + L +M+ +G PD +T +
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTT--- 120
Query: 143 ACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVS 202
L+ G+ +H +E+ VD + + + + V+
Sbjct: 121 -------LIHGLFLHNKASEAVALVD---------------------RMVQRGCQPNLVT 152
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDT----WNALISGMVQNNWFEGAIDLVREMQ 258
YG +++G G + A ++ ME ++ +N +I + + + A++L +EM+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 259 GSGLKPNAVTLASTI-------------------------PLFSYFSNL-----RGGK-- 286
G++PN VT +S I P F+ L + GK
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 287 ---EVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAII 339
++H I+R D +I+ ++I+ + + A+Q+F+ S+ L + +I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGI 399
+ L+ +M G+ D VT T ++ H G D A K+F M S G+
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GV 391
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAK---FISEMPIEPSAKAWGALLNGASVYGDVETG-- 454
P + Y+ ++ L GKL +A + ++ + I+ + ++ G G V+ G
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 455 KFACDHLFEIEPESSGNYIIMANLYSCAGR-WEEASRVRKRMEEIG 499
F L ++P +++ L C+ R +EA + K+M+E G
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGL--CSKRLLQEAYALLKKMKEDG 495
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 15/260 (5%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCG 81
+ I PD FT S++ K+ F++ + D+ N L+ +C+
Sbjct: 282 IKRSIDPDIFTYNSLINGFCM--HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 82 EIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTI 137
+ ++F M R DTV++ ++I G G + ++++ +M+S G V PD +T
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTY 398
Query: 138 VSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSE 197
++ + L +EV ++ +S I++D+ + +I K G +D +LF +S
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 198 K----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNNWFEG 249
K + V+Y ++ISG + + +A + + M+ P T+N LI +++
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 250 AIDLVREMQGSGLKPNAVTL 269
+ +L+REM+ +A T+
Sbjct: 519 SAELIREMRSCRFVGDASTI 538
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/551 (19%), Positives = 220/551 (39%), Gaps = 84/551 (15%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF V + P +L A+A + ++ V + G+ D++ + +
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAK--MNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 75 TCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
C+CR ++ LA V M E D V+ +S++ GY + L +M+ +G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-Y 184
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
PD T + L+ G+ +H +E+ VD +
Sbjct: 185 KPDTFTFTT----------LIHGLFLHNKASEAVALVD---------------------Q 213
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----WNALISGMVQNNW 246
+ + + D V+YG++++G G + A + + ME ++ +N +I G+ +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
+ A++L EM G++P+ T +S I + + + I R + N+ +A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 307 IIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ID + K G + A +++D+ RS + ++++I + H A ++ M+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK-------------------------- 396
P+ VT + ++ + V+E ++F M +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 397 --------YGIQPLVEQYACMVGVLSRAGKLSEAA---KFISEMPIEPSAKAWGALLNGA 445
G+ P + Y ++ L + GKL++A +++ +EP + ++ G
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 446 SVYGDVETG-KFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIR 504
G VE G + C+ + + Y M + + G EEA + K+M+E G
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 505 GSSWIEMSGRL 515
G+ + RL
Sbjct: 574 GTYNTLIRARL 584
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 193/453 (42%), Gaps = 64/453 (14%)
Query: 22 VDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFV---LRRGLETDIFVENALVTCYC 78
V+ G PD+FT T+++ + + EA V ++RG + D+ +V C
Sbjct: 180 VEMGYKPDTFTFTTLIHGLF-----LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 79 RCGEIGLA----RKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
+ G+I LA +K+ G E D V +N++I G + ++ L+ EM + G + PD
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDV 293
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T S++ + + E I ++ +A+I + K G L A +L++E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 195 MSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNNW 246
M ++ D +Y S+I+G+ + + +A+ +F M + P + T++ LI G +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
E ++L REM GL N VT + I F + R C
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGF--------------FQARDC---------- 449
Query: 307 IIDTYAKLGFIHGARQVFDQARS----RSLVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
A+ VF Q S +++ + ++ +G + A+ ++ + S
Sbjct: 450 -----------DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
++PD T ++ +G V++ W++F + K G+ P V Y M+ R G EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 423 AKFISEMPIE---PSAKAWGALLNGASVYGDVE 452
+ +M + P++ + L+ GD E
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCF--VLRRGLETDIFVENAL 73
L+ + I PD FT +S++ F + + EA H F ++ + ++ + L
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLING-----FCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 74 VTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
+ +C+ + ++F M +R +TV++ ++I G+ Q + + ++ +M+SVG
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG- 463
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
V P+ +T ++ ++ L M V ++ S +E D+ N +I K G ++
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 190 ELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGM 241
ELF +S K + ++Y ++ISG+ G +A + + M+ P T+N LI
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLA 270
+++ E + +L++EM+ G +A T+
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDASTIG 612
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 184/395 (46%), Gaps = 39/395 (9%)
Query: 11 YRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVE 70
++ + F G+ PD T S+L + ++ + + R +E D+F
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL--WEAARNLFDEMTNRRIEQDVFSY 377
Query: 71 NALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLS 126
N L+ C+ G++ LA ++ MP + + VS++++I G+++ G ++E L+ EM
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 127 VGSVVPDGV---TIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
+G + D V T++S+ G+S++ +++ + GI+ D+ NA++ Y K G
Sbjct: 438 LG-IALDRVSYNTLLSIYTKVGRSEE---ALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 184 SLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----WN 235
D +++F EM + + ++Y ++I GY G +A ++FR ++ GL ++
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
ALI + +N A+ L+ EM G+ PN VT S I F + + + Y+
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD---YSNGG 610
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGAR--QVFDQARSRSLVIWTAIITAYAAHGDASLA-- 351
+ +A+ +T G R Q+F Q + S T G L+
Sbjct: 611 SLPFSSSALSALTET-------EGNRVIQLFGQLTTES----NNRTTKDCEEGMQELSCI 659
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
L ++ +M I+P+ VT +A+L AC+ ++A
Sbjct: 660 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 18/342 (5%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPE----RDTVSWNSMIGGYSQCGF-YEE 116
G ++ +AL++ Y R G A VF+ M E + V++N++I + G +++
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
+ + EM G V PD +T S++ C + + + IE D+ N ++
Sbjct: 323 VAKFFDEMQRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 177 AMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPG-- 230
K G +D A E+ +M K + VSY ++I G+ G +A ++F M G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 231 LD--TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
LD ++N L+S + E A+D++REM G+K + VT + + + K+V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAA 344
R N+ + +ID Y+K G A ++F + +S L V+++A+I A
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
+G A+ L +M GI P+ VT +++ A S +D +
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARS----RSLVIWTAIITA 341
K + A Y +Y +A+I Y + G A VF+ + +LV + A+I A
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 342 YAAHG-DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
G + + +M +G+QPD++T ++L C+ GL + A +F+ M ++ I+
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IE 371
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLNG----------ASV 447
V Y ++ + + G++ A + +++MP++ P+ ++ +++G ++
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 448 YGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHK 502
+G++ A D + +Y + ++Y+ GR EEA + + M +G+ K
Sbjct: 432 FGEMRYLGIALDRV---------SYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGM 226
L +A+I+ + G + A+ +FE ++ ++IS Y G +A VF M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 227 E----NPGLDTWNALISGMVQNNW-FEGAIDLVREMQGSGLKPNAVTLASTIP------- 274
+ P L T+NA+I + F+ EMQ +G++P+ +T S +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 275 ------LFSYFSNLRGGKEVHAY-----------------------AIRRCYDQNIYVAT 305
LF +N R ++V +Y ++R N+ +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM-PNVVSYS 413
Query: 306 AIIDTYAKLGFIHGARQVFDQAR----SRSLVIWTAIITAYAAHGDASLALGLYAQMLDS 361
+ID +AK G A +F + R + V + +++ Y G + AL + +M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 362 GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE 421
GI+ D VT A+L G DE K+F M ++ + P + Y+ ++ S+ G E
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKE 532
Query: 422 AAKFISE 428
A + E
Sbjct: 533 AMEIFRE 539
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 24/315 (7%)
Query: 205 SIISGYMAYGFVVKARDVFR----GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS 260
++IS YG V A+ +F G + ++ALIS ++ E AI + M+
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 261 GLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI------RRCYDQNIYVATAIIDTYAKL 314
GL+PN VT + I +GG E A R + +++ ++
Sbjct: 298 GLRPNLVTYNAVIDACG-----KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 315 GFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
G AR +FD+ +R + + ++ A G LA + AQM I P+ V+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
+ V+ A +G DEA +F M GI Y ++ + ++ G+ EA + EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 431 ---IEPSAKAWGALLNGASVYGDV-ETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWE 486
I+ + ALL G G E K + E + Y + + YS G ++
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 487 EASRVRKRMEEIGVH 501
EA + + + G+
Sbjct: 532 EAMEIFREFKSAGLR 546
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 289 HAYAIRRCYDQNIY--VATAIIDTYAKLGFIHGARQVFDQARS----RSLVIWTAIITAY 342
+ +A++R +N +A+A+I T + G + A+++F+ A + ++ ++A+I+AY
Sbjct: 219 YEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAY 278
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGL-VDEAWKIFNTMHSKYGIQP 401
G A+ ++ M + G++P+ VT AV+ AC G+ + K F+ M + G+QP
Sbjct: 279 GRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQP 337
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFAC 458
+ ++ V SR G A EM IE ++ LL+ G +
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM------- 390
Query: 459 DHLFEIEPESSGNYIIMANL---------YSCAGRWEEASRVRKRMEEIGV 500
D FEI + IM N+ ++ AGR++EA + M +G+
Sbjct: 391 DLAFEILAQMPVKR-IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 197/447 (44%), Gaps = 26/447 (5%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR---RGLETDIFVEN 71
L L G PD+ T V+ + + + EA V R RG D
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCK-----FDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
L+ C+ G + A+ +F +P+ + V +N++I G+ G ++ K + +M++ +V
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
PD T S++ + + L +EV + G + ++ ++ + K G +D A +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 192 FEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQ 243
EMS + + V + +IS + + +A ++FR M P + T+N+LISG+ +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 244 NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYV 303
+ + A+ L+R+M G+ N VT + I F ++ +++ + + +
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 304 ATAIIDTYAKLGFIHGARQVFDQ----ARSRSLVIWTAIITAYAAHGDASLALGLYAQML 359
++I + G + AR +F++ + S + +I G A+ +M+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 360 DSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKL 419
G PD VT +++ +G +++ +F + ++ GI P + ++ L + G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFV 685
Query: 420 SEAAKFISEMPIE----PSAKAWGALL 442
+A + E IE P+ + W LL
Sbjct: 686 YDACLLLDE-GIEDGFVPNHRTWSILL 711
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 188/485 (38%), Gaps = 102/485 (21%)
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGS--------------------------------- 129
S++ Y + GF + RL +EM +V S
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 130 --VVPDGVTIVSVMQA-CGQSK-----DLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
+ P T VM+A C ++ L+ M HG V S I +I +K
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY------QTLIHSLSK 264
Query: 182 CGSLDYARELFEEM---------------------------------------SEKDDVS 202
C ++ A +L EEM DD++
Sbjct: 265 CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 203 YGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGS-G 261
YG +++G G V A+D+F + P + +N LI G V + + A ++ +M S G
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 262 LKPNAVTLASTIPLFSYFSNLRGG---KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIH 318
+ P+ T S I + Y+ G + +H + C N+Y T ++D + KLG I
Sbjct: 385 IVPDVCTYNSLI--YGYWKEGLVGLALEVLHDMRNKGC-KPNVYSYTILVDGFCKLGKID 441
Query: 319 GARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVL 374
A V ++ + L V + +I+A+ A+ ++ +M G +PD T +++
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 375 TACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPS 434
+ + A + M S+ G+ Y ++ R G++ EA K ++EM + S
Sbjct: 502 SGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 435 AK---AWGALLNGASVYGDVETGKFACDHLF-EIEPESSGNYIIMANLYSCAGRWEEASR 490
+ +L+ G G+V+ + + + + S+ + I+ N +G EEA
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 491 VRKRM 495
+K M
Sbjct: 621 FQKEM 625
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 175/379 (46%), Gaps = 19/379 (5%)
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYME 123
F+ N + +C+ G++ A M ++ + V +N+M+ + + + + ++ E
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
ML G + P+ T ++ ++KD +V +N S E + + N +I K G
Sbjct: 510 MLEKG-LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 184 SLDYARELFEEMSEKDD-----VSYGSIISGYMAYGFVVKARDVFRGM----ENPGLDTW 234
A+E+ + + ++ SY SII G++ G A + +R M ++P + T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
+LI+G ++N + A+++ EM+ LK + + I F ++++ + +
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGA----RQVFDQARSRSLVIWTAIITAYAAHGDASL 350
N+ V ++I + LG + A +++ + S L +T +I G+ +L
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMV 410
A LY+++LD GI PD++ ++ + G +A K+ M K + P V Y+ ++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK-DVTPNVLLYSTVI 807
Query: 411 GVLSRAGKLSEAAKFISEM 429
R G L+EA + EM
Sbjct: 808 AGHHREGNLNEAFRLHDEM 826
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 201/461 (43%), Gaps = 26/461 (5%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEEC 117
G+ + +LV YC+ E+G A +F+ M E D V ++ M+ + + E+
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
YM M SV + P V + +++Q C +++ +E+ ES I +CN +
Sbjct: 400 IEFYMRMKSV-RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGF-MCNKIFL 457
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD- 232
++ K G +D A + M +K + V Y +++ + + AR +F M GL+
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 233 ---TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
T++ LI G +N + A D++ +M S + N V + I KE+
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 290 AYAIR-RCYDQNIYVATAIIDTYAKLGFIHGA----RQVFDQARSRSLVIWTAIITAYAA 344
I+ + Y + +IID + K+G A R++ + +S ++V +T++I +
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
LAL + +M ++ D A++ + A+ +F+ + + G+ P V
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-PELGLMPNVS 696
Query: 405 QYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHL 461
Y ++ GK+ A +M I + +++G G++ L
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 462 FE--IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
+ I P+ ++++ N S G++ +AS++ + M++ V
Sbjct: 757 LDLGIVPDEIL-HMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 186/425 (43%), Gaps = 32/425 (7%)
Query: 56 CFVLRRGLETDIFVE--NALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYS 109
CF L + FV N +++ R I A+++++ M D V+ ++
Sbjct: 191 CFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASL 250
Query: 110 QCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV-HGFVNESGIEVD 168
+ EE +++ ++S G+ PDG+ +QA ++ DLV+ +++ + G+
Sbjct: 251 RERKPEEAVKIFRRVMSRGAE-PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPAS 309
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFR 224
+VI + K G+++ A + +EM ++ S+++GY + KA D+F
Sbjct: 310 QETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 225 GMENPGLDTWNALISGMVQNNWF------EGAIDLVREMQGSGLKPNAVTLASTIPLFSY 278
ME GL + S MV+ WF E AI+ M+ + P++V + + I
Sbjct: 370 RMEEEGLAPDKVMFSVMVE--WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427
Query: 279 FSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVI 334
+ E+ + + + ++ I + K G + A + ++V
Sbjct: 428 AESPEAALEIFNDSF-ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 335 WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMH 394
+ ++ A+ + LA ++++ML+ G++P+ T + ++ + AW + N M+
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 395 -SKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEP----SAKAWGALLNGASVYG 449
S + ++ Y ++ L + G+ S+A + + + E S ++ ++++G G
Sbjct: 547 ASNFEANEVI--YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 450 DVETG 454
D ++
Sbjct: 605 DTDSA 609
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 17/332 (5%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGF 113
+L + + ++ V N+L+ +CR A KVF M + D ++ +++ G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
EE L+ M +G + PD + +++ A + +G+++ + + I D+ +CN
Sbjct: 547 LEEALFLFFRMFKMG-LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 174 AVIAMYAKCGSLDYARELFEEM----SEKDDVSYGSIISGYMAYGFVVKARDVFRGME-- 227
VI + KC ++ A + F + E D V+Y ++I GY + + +A +F ++
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 228 --NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
P T LI + +NN +GAI + M G KPNAVT + FS ++ G
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITA 341
++ + +I + IID K G + A +F QA L V + +I
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
Y G A LY ML +G++PD + A+
Sbjct: 786 YCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/545 (21%), Positives = 221/545 (40%), Gaps = 71/545 (13%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASP-----SFSYYKPVKEAHCFVLRRGLETDIFVEN 71
L + +D G +P+ T +++ +F +K +++ RG+E D+ +
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ-------RGIEPDLIAYS 325
Query: 72 ALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
L+ Y + G +G+ K+F + D V ++S I Y + G +Y ML
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G + P+ VT +++ Q + ++G + + G+E + +++I + KCG+L
Sbjct: 386 G-ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 188 ARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALIS 239
L+E+M + D V YG ++ G G ++ A M + +N+LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI-----------PLFSYFSNLRGGKEV 288
G + N F+ A+ + R M G+KP+ T + + LF +F + G E
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 289 HAYAI------------------------RRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
A A R +I V +I K I A + F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 325 DQ----ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+ +V + +I Y + A ++ + + P+ VTLT ++ +
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKA 437
+D A ++F+ M K G +P Y C++ S++ + + K EM I PS +
Sbjct: 685 NDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 438 WGALLNGASVYGDVE--TGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRM 495
+ +++G G V+ T F ++ P+ Y I+ Y GR EA+ + + M
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRGYCKVGRLVEAALLYEHM 802
Query: 496 EEIGV 500
GV
Sbjct: 803 LRNGV 807
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 23/373 (6%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEEC 117
G+ FV +AL +C+ GE+ A + ER VS N ++ G S E
Sbjct: 216 GVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVA 270
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
RL +L G P+ VT +++ + ++ ++ + + GIE DL + +I
Sbjct: 271 SRLLSLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 178 MYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME----NP 229
Y K G L +LF + K D V + S I Y+ G + A V++ M +P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
+ T+ LI G+ Q+ A + ++ G++P+ VT +S I F NLR G ++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGF-IHGAR---QVFDQARSRSLVIWTAIITAYAAH 345
I+ Y ++ + ++D +K G +H R ++ Q+ ++V++ ++I +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
AL ++ M GI+PD T T V+ G ++EA +F M K G++P
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF-KMGLEPDALA 568
Query: 406 YACMVGVLSRAGK 418
Y ++ + K
Sbjct: 569 YCTLIDAFCKHMK 581
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/548 (20%), Positives = 218/548 (39%), Gaps = 92/548 (16%)
Query: 8 NGLYRHLLD----LFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRG 62
NGL+ LD LF V + P F +L AIA F + E + R G
Sbjct: 59 NGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK---MQRLG 115
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECK 118
+ +++ N L+ C+CR +I LA + M E V+ +S++ GY +
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
L +M+ +G PD +T + L+ G+ +H +E+ VD
Sbjct: 176 ALVDQMVEMG-YRPDTITFTT----------LIHGLFLHNKASEAVALVD---------- 214
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----W 234
+ + + + V+YG +++G G + A ++ ME ++ +
Sbjct: 215 -----------RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
+ +I + + + A++L EM+ G++PN +T +S I + + + I
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGDASL 350
R + N+ A+ID + K G + A +++D+ RS + ++++I + H
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 351 ALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK-------------- 396
A ++ M+ P+ VT ++ + +DE ++F M +
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 397 --------------------YGIQPLVEQYACMVGVLSRAGKLSEAA---KFISEMPIEP 433
G+ P + Y ++ L + GKL +A +++ +EP
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 434 SAKAWGALLNGASVYGDVETG--KFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRV 491
+ + ++ G G VE G F L ++P+ Y M + + G EEA +
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII-YNTMISGFCRKGLKEEADAL 562
Query: 492 RKRMEEIG 499
++M E G
Sbjct: 563 FRKMREDG 570
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 162/407 (39%), Gaps = 60/407 (14%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR---RGLETDIFVENAL 73
L V+ G PD+ T T+++ + + EA V R RG + ++ +
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLF-----LHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 74 VTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
V C+ G+I LA + + M E + V ++++I + ++ L+ EM + G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG- 290
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
V P+ +T S++ + + + E I ++ NA+I + K G L A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 190 ELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGM 241
+L++EM ++ D +Y S+I+G+ + + +A+ +F M + P + T+N LI+G
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 242 VQNNWFEGAIDLVREMQ-----------------------------------GSGLKPNA 266
+ + ++L REM G+ PN
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 267 VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ 326
+T + + L V Y R + IY +I+ K G + +F
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 327 ARSR----SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVT 369
+ ++I+ +I+ + G A L+ +M + G PD T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 196/457 (42%), Gaps = 40/457 (8%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHC--------FVLRR-----GLETDIFVEN 71
G ++ V +K A+P+ S Y + + C F LR GL ++ N
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 72 ALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+V C+ ++ A +F+ M + D +++ S+I G + G ++ ++Y +ML
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD- 475
Query: 128 GSVVPDGVTIVSVMQAC---GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
+ + S+++ G+ +D G +++ + DL L N + K G
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKED---GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 185 LDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPG--LDT--WNA 236
+ R +FEE+ + D SY +I G + GF + ++F M+ G LDT +N
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
+I G + A L+ EM+ G +P VT S I + L + A +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV----IWTAIITAYAAHGDASLAL 352
+ N+ + +++ID + K+G I A + ++ + L W +++ A + + AL
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
+ M + P+QVT ++ ++A+ + M K G++P Y M+
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ-KQGMKPSTISYTTMISG 771
Query: 413 LSRAGKLSEAAKFISEMPIE---PSAKAWGALLNGAS 446
L++AG ++EA P + + A++ G S
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 193/487 (39%), Gaps = 66/487 (13%)
Query: 14 LLD-LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF---VLRRGLETDIFV 69
LLD + +SS+DA I VL + SF V A F + GL+ D
Sbjct: 225 LLDEMKSSSLDADI---------VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 70 ENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEML 125
+++ C+ + A ++F+ + + T ++N+MI GY G ++E L
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 126 SVGSV---------------------------------VPDGVTIVSVMQACGQSKDLVL 152
+ GS+ P+ T ++ ++ L
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 153 GMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIIS 208
E+ + ++G+ ++ N ++ K LD A +FEEM K D++++ S+I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 209 GYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAID----LVREMQGSGLKP 264
G G V A V+ M + T + + + +++N + G + + ++M P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
+ L + + G+ + R + + + +I K GF + ++F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 325 DQARSRSLVI----WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
+ + V+ + +I + G + A L +M G +P VT +V+ A
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 381 GLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKA 437
+DEA+ +F SK I+ V Y+ ++ + G++ EA + E+ + P+
Sbjct: 636 DRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 438 WGALLNG 444
W +LL+
Sbjct: 695 WNSLLDA 701
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 23/281 (8%)
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
+++N+L+ M + F+ ++ EM +G P+ T + + LR G +V
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARS----RSLVIWTAIITAYAAHGD 347
+ + T +I ++ + +F Q + ++ ++T +I +A G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
AL L +M S + D V + + G VD AWK F+ + + G++P Y
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYT 277
Query: 408 CMVGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLNGASVYGDVETGKFACDHLFE- 463
M+GVL +A +L EA + + P A+ ++ G YG GKF D +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG---YGSA--GKF--DEAYSL 330
Query: 464 IEPESSGNYIIMANLYSC-------AGRWEEASRVRKRMEE 497
+E + + I Y+C G+ +EA +V + M++
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 151/371 (40%), Gaps = 44/371 (11%)
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
T++ A S D++L + + E G E + L +I +AK G +D A L +E
Sbjct: 172 TTLIGAFSAVNHS-DMMLTLFQQ--MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 195 MSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLV 254
M S+ + + Y N +D++ + G V W
Sbjct: 229 MKS------SSLDADIVLY--------------NVCIDSFGKV--GKVDMAW-----KFF 261
Query: 255 REMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKL 314
E++ +GLKP+ VT S I + + L E+ + + Y +I Y
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 315 GFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTL 370
G A + ++ R++ S++ + I+T G AL ++ +M P+ T
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTY 380
Query: 371 TAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP 430
++ +G +D A+++ ++M K G+ P V MV L ++ KL EA EM
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQ-KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 431 IE---PSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANL---YSCAGR 484
+ P + +L++G G V+ + + ++ + N I+ +L + GR
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM--LDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 485 WEEASRVRKRM 495
E+ ++ K M
Sbjct: 498 KEDGHKIYKDM 508
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/551 (21%), Positives = 218/551 (39%), Gaps = 69/551 (12%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRGLETDIFVENAL 73
++LF V + P + +L AIA F + E + G+ +++ + L
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ---MQNLGISHNLYTYSIL 122
Query: 74 VTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
+ C+CR ++ LA V M E D V+ NS++ G+ G+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH-----------------GN 165
Query: 130 VVPDGVTIVSVMQACG-QSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYA 188
+ D V++V M G Q +HG + + L + ++
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV----------- 214
Query: 189 RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQN 244
+ + D V+YG +++G G + A + + ME PG+ +N +I +
Sbjct: 215 -----KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVA 304
A++L EM G++PN VT S I + + + I R + N+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 305 TAIIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGDASLALGLYAQMLD 360
+A+ID + K G + A +++D+ RS + ++++I + H A ++ M+
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 361 SGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLS 420
P+ VT ++ + VDE ++F M S+ G+ Y ++ +A +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 421 EAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHL--FEIEPESSGNYIIM 475
A +M + P + LL+G G VET ++L ++EP+ Y IM
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY-TYNIM 507
Query: 476 ANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYL 535
AG+ E+ + + GV + MSG F K + E
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG----FCRKGLKEEA-------- 555
Query: 536 EGLFCMMREEG 546
+ LF M+EEG
Sbjct: 556 DALFREMKEEG 566
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCF--VLRRGLETDIFVENAL 73
L+ + I PD FT +S++ F + + EA H F ++ + ++ N L
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLING-----FCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 74 VTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
+ +C+ + ++F M +R +TV++ ++I G+ Q + + ++ +M+S G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG- 461
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
V+PD +T ++ + + + V ++ S +E D+ N +I K G ++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 190 ELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGM 241
+LF +S K + V+Y +++SG+ G +A +FR M+ P T+N LI
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLA 270
+++ + +L+REM+ +A T+
Sbjct: 582 LRDGDKAASAELIREMRSCRFVGDASTIG 610
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF--VLRRGLETDIFVENALV 74
L + ++ I+P+ T ++++ A K V+ + +++R ++ DIF ++L+
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEG----KLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 75 TCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+C + A+ +F+ M +D V++N++I G+ + +E L+ EM G +
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG-L 427
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V + VT +++ Q+++ V + G+ D+ + ++ G ++ A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 191 LFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMV 242
+FE + E D +Y +I G G V D+F + P + T+ ++SG
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 243 QNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR-GGKEVHAYAIR 294
+ E A L REM+ G P++ T + I ++LR G K A IR
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIR-----AHLRDGDKAASAELIR 595
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 160/354 (45%), Gaps = 15/354 (4%)
Query: 103 SMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNE 162
S+I Y Q G E ++ + G + + G+++ ++ M V+ +
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM-VYRDMKR 174
Query: 163 SGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVK 218
G E ++ N ++ K +D A++L EMS K D VSY ++IS G V +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 219 ARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSY 278
R++ E P + +NALI+G+ + + ++GA +L+REM G+ PN ++ ++ I +
Sbjct: 235 GRELAERFE-PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 279 FSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ-----ARSRSLV 333
+ ++R NIY ++++ G A +++Q ++V
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 334 IWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM 393
+ ++ + +HG+ A+ +++ M + G P+ T +++ A G +D A I+N M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 394 HSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLNG 444
+ G P V Y MV L R K EA I M E PS + A + G
Sbjct: 414 LTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 20/294 (6%)
Query: 174 AVIAMYAKCGSLDYARELFEEMSEKD-DVS---YGSIISGYMAYGFVVKARDVFRGMENP 229
+VI++Y + G + A E+F + E D S Y ++ + + V+R M+
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 230 GLD----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
G + T+N L+ + +NN +GA L+ EM G P+AV+ + I ++ G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA----RQVFDQARSRSLVIWTAIITA 341
+E+ ++ + V A+I+ K GA R++ ++ S +++ ++ +I
Sbjct: 236 RELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
G LA QML G P+ TL++++ C G +A ++N M +G+QP
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVE 452
V Y +V G + +A S M P+ + +G+L+NG + G ++
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 185/463 (39%), Gaps = 67/463 (14%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPS-----FSYYKPVKEAHCFVLRRGL 63
GL +++F + G P VL + + + Y+ +K R G
Sbjct: 125 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK-------RDGF 177
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKR 119
E ++F N L+ C+ ++ A+K+ M + D VS+ ++I + G +E +
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
L V VSV A L N + +
Sbjct: 238 LAERFEPV----------VSVYNA---------------------------LINGLCKEH 260
Query: 180 AKCGSLDYARELFEEMSEKDDVSYGSII-----SGYMAYGFVVKARDVFRGMENPGLDTW 234
G+ + RE+ E+ + +SY ++I SG + F + + RG +P + T
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC-HPNIYTL 319
Query: 235 NALISGMVQNNWFEGAIDLVREM-QGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
++L+ G A+DL +M +G GL+PN V + + F N+ V ++
Sbjct: 320 SSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME 379
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDAS 349
NI ++I+ +AK G + GA ++++ + ++V++T ++ A H
Sbjct: 380 EIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFK 439
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A L M P T A + +G +D A K+F M ++ P + Y +
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499
Query: 410 VGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYG 449
+ L++A ++ EA E+ +E S+ + LL+G+ G
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 198/461 (42%), Gaps = 26/461 (5%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF-VLRRGLETDI 67
G Y L L + V G +PD T ++K F+ K +L + + D+
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGF----FTLRNIPKAVRVMEILEKFGQPDV 158
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYME 123
F NAL+ +C+ I A +V D M +D TV++N MIG G + ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
+LS + P +T +++A + +++ + G++ D+ N +I K G
Sbjct: 219 LLS-DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 184 SLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWN 235
+D A E+ + E D +SY ++ + G + + M +P + T++
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
LI+ + ++ E A++L++ M+ GL P+A + I F L E I
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGARQVFDQ----ARSRSLVIWTAIITAYAAHGDASLA 351
+I ++ T K G A ++F + S + + + +A + GD A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
L + +M+ +GI PD++T ++++ G+VDEA+++ M S P V Y ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS-CEFHPSVVTYNIVLL 516
Query: 412 VLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYG 449
+A ++ +A + M P+ + L+ G G
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 178/405 (43%), Gaps = 21/405 (5%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGF 113
+++ G E D + N L+ C + A ++ D M E ++ N+++ G G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+ L M+ G P+ VT V+ +S L ME+ + E I++D +
Sbjct: 209 VSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 174 AVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGF----VVKARDVFRG 225
+I K GSLD A LF EM K D ++Y ++I G+ G RD+ +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
+P + T++ LI V+ A L++EM G+ PN +T S I F + L
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITA 341
++ I + D +I +I+ Y K I ++F + R + V + ++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+ G +A L+ +M+ ++PD V+ +L +G +++A +IF + K ++
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE-KSKMEL 506
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLN 443
+ Y ++ + A K+ +A +P ++ A+A+ +++
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFV---LRRGLET 65
G R L + GI+P++ T S++ F ++EA V + +G +
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDG-----FCKENRLEEAIQMVDLMISKGCDP 401
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLY 121
DI N L+ YC+ I ++F M R +TV++N+++ G+ Q G E K+L+
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
EM+S V PD V+ ++ + +L +E+ G + +S +E+D+ + +I
Sbjct: 462 QEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 182 CGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDT 233
+D A +LF + K D +Y +IS + KA +FR M P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
+N LI + ++ A +L+ EM+ SG + T+ I + S
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 47/339 (13%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCG 112
E +++ + I N L+ + CG + + R++FD MP RD SW + G + G
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 113 FYEECKRLYMEMLS---VGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDL 169
YE+ L++ ML G+ + V++AC +D LG +VH
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHA----------- 217
Query: 170 PLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENP 229
LC+ K G +D E+D GS+I Y + + A V + N
Sbjct: 218 -LCH-------KLGFID----------EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNA 259
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL-RGGKEV 288
W A ++ + F+ I EM G+K N ++ + S+ S+ R G++V
Sbjct: 260 NTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQV 319
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR-SLVIWTAIITAYAAHGD 347
HA AI+ ++ + + +I+ Y K G + A +VF ++ S+ W A++ +Y +G
Sbjct: 320 HANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGI 379
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
A+ L QM +GI+ AH L++EA
Sbjct: 380 YIEAIKLLYQMKATGIK-------------AHDTLLNEA 405
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 118/294 (40%), Gaps = 37/294 (12%)
Query: 154 MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAY 213
++VH + +S I + N ++ M+ CG LD R++F+ M +D S+ + G +
Sbjct: 110 LQVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEM 167
Query: 214 GFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
G A +F + +++ Q K + L +
Sbjct: 168 GDYEDAAFLF---------------------------VSMLKHSQKGAFKIPSWILGCVL 200
Query: 274 PLFSYFSNLRGGKEVHAYAIRRCY--DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS 331
+ + GK+VHA + + +++ Y++ ++I Y + + A V Q + +
Sbjct: 201 KACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNAN 260
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
V W A +T G+ + + +M + GI+ + + VL AC+ V + +
Sbjct: 261 TVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS---WVSDGGRSGQ 317
Query: 392 TMHS---KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALL 442
+H+ K G + ++ + + GK+ +A K E S W A++
Sbjct: 318 QVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMV 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G ++ ++ F + GI + ++VLKA + S + ++ H ++ G E+D
Sbjct: 275 GEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVS-DGGRSGQQVHANAIKLGFESDCL 333
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPERDTVS-WNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ L+ Y + G++ A KVF + +VS WN+M+ Y Q G Y E +L +M +
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKAT 393
Query: 128 GSVVPD 133
G D
Sbjct: 394 GIKAHD 399
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 186/445 (41%), Gaps = 62/445 (13%)
Query: 8 NGL----YRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGL 63
NGL + LDLF V++ P T +L IA + V + G+
Sbjct: 46 NGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAK--MKKFDVVINLCDHLQIMGV 103
Query: 64 ETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKR 119
D++ N L+ C+C+ + LA M E D V++ S+I G+
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF----------- 152
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMY 179
+G+ + + +++V+ M E GI+ D+ + +I
Sbjct: 153 ------CLGNRMEEAMSMVNQMV-------------------EMGIKPDVVMYTTIIDSL 187
Query: 180 AKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGME----NPGL 231
K G ++YA LF++M D V Y S+++G G A + RGM P +
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV-HA 290
T+NALI V+ F A +L EM + PN T S I F + +++ +
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 291 YAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHG 346
+ C+ ++ T++I+ + K + A ++F + + L + +T +I + G
Sbjct: 308 METKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY--GIQPLVE 404
++A +++ M+ G+ P+ T +L ++G V +A IF M + G+ P +
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 405 QYACMVGVLSRAGKLSEAAKFISEM 429
Y ++ L GKL +A +M
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
G +R L I PD T +++ A + +E + ++R + +IF
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG--KFLDAEELYNEMIRMSIAPNIF 283
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEM 124
+L+ +C G + AR++F M + D V++ S+I G+ +C ++ +++ EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
G + + +T +++Q GQ + EV + G+ ++ N ++ G
Sbjct: 344 SQKG-LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 185 LDYARELFEEMSEK--DDV-----SYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNAL 237
+ A +FE+M ++ D V +Y ++ G G + KA VF M +D
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 238 I----SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
GM + + A++L + G+KPN VT + I
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 16 DLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCFVL--RRGLETDIFVENA 72
+L+ + I+P+ FT TS++ F V EA F L +G D+ +
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLING-----FCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 73 LVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVG 128
L+ +C+C ++ A K+F M ++ +T+++ ++I G+ Q G + ++ M+S G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 129 SVVPDGVTIVSVMQAC----GQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
VP + +V+ C G+ K ++ E G+ ++ N ++ G
Sbjct: 383 --VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 185 LDYARELFEEMSEKD----DVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNA 236
L+ A +FE+M +++ ++Y II G G V A ++F + + P + T+
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGL 262
+ISG+ + A L R+M+ G+
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 189/435 (43%), Gaps = 32/435 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR---RGLETDIFVENAL 73
L V+ G PD+ T T+++ + + EA V R RG + ++ +
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLF-----LHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 74 VTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
V C+ G+ LA + + M E D V +N++I + ++ L+ EM + G
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 290
Query: 130 VVPDGVT---IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLD 186
+ P+ VT ++S + + G+ D ++ + E I +L NA+I + K G
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 187 YARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALI 238
A +L+++M ++ D +Y S+++G+ + + KA+ +F M + P + T+N LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
G ++ E +L REM GL + VT + I + + ++V +
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGL 354
+I + ++D G + A +VFD + + I+T +I G L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
+ + G++P+ VT +++ L+ EA+ + M G P Y ++
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPNSGTYNTLIRAHL 586
Query: 415 RAGKLSEAAKFISEM 429
R G + +A+ I EM
Sbjct: 587 RDGDKAASAELIREM 601
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 214/550 (38%), Gaps = 96/550 (17%)
Query: 8 NGLYRHLLD----LFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLRRG 62
NGL+ LD LF V + P +L AIA F + E + R
Sbjct: 59 NGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK---MQRLE 115
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECK 118
+ ++ N L+ C+CR +I LA + M E V+ +S++ GY +
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 119 RLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAM 178
L +M+ +G PD +T + L+ G+ +H +E+ VD
Sbjct: 176 ALVDQMVEMG-YRPDTITFTT----------LIHGLFLHNKASEAVALVD---------- 214
Query: 179 YAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----W 234
+ + + + V+YG +++G G A ++ ME ++ +
Sbjct: 215 -----------RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIR 294
N +I + + + A++L +EM+ G++PN VT +S I + ++ + I
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 295 RCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL---------------------- 332
+ + N+ A+ID + K G A +++D RS+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 333 -----------------VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLT 375
V + +I + L+ +M G+ D VT T ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 376 ACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAK---FISEMPIE 432
H G D A K+F M S G+ P + Y+ ++ L GKL +A + ++ + I+
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 433 PSAKAWGALLNGASVYGDVETG--KFACDHLFEIEPESSGNYIIMANLYSCAGR-WEEAS 489
+ ++ G G V+ G F L ++P +++ L C+ R +EA
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL--CSKRLLQEAY 560
Query: 490 RVRKRMEEIG 499
+ K+M+E G
Sbjct: 561 ALLKKMKEDG 570
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
L+ + I PD FT S++ K+ F++ + D+ N L+
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCM--HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 77 YCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
+C+ + ++F M R DTV++ ++I G G + ++++ +M+S G V P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPP 468
Query: 133 DGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELF 192
D +T ++ + L +EV ++ +S I++D+ + +I K G +D +LF
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 193 EEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQN 244
+S K + V+Y ++ISG + + +A + + M+ P T+N LI +++
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Query: 245 NWFEGAIDLVREMQGSGLKPNAVTLA 270
+ +L+REM+ +A T+
Sbjct: 589 GDKAASAELIREMRSCRFVGDASTIG 614
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 162/377 (42%), Gaps = 18/377 (4%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGF 113
+++ G E DI N+L+ +C I A + D M E DTV++ ++I G
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
E L M+ G PD VT +V+ + D L + + + + IE ++ + +
Sbjct: 199 ASEAVALIDRMVQRGC-QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 174 AVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGM--- 226
VI K D A LF EM K + ++Y S+IS YG A + M
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 227 -ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
NP L T++ALI V+ A L EM + PN T +S I F L
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITA 341
K++ IR+ N+ +I+ + K + ++F + R L V +T +I
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+ D A ++ QM+ G+ P+ +T +L +G + +A +F + + ++P
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEP 496
Query: 402 LVEQYACMVGVLSRAGK 418
+ Y M+ + +AGK
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 183/442 (41%), Gaps = 51/442 (11%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEEC 117
G+ +++ N L+ C+CRC + LA + M E D V+ NS++ G+ +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
L +M+ +G PD VT + L+ G+ +H +E+ +D
Sbjct: 168 VALVDQMVEMG-YKPDTVTFTT----------LIHGLFLHNKASEAVALID--------- 207
Query: 178 MYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT---- 233
+ + + D V+YG++++G G A ++ ME ++
Sbjct: 208 ------------RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 234 WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI 293
++ +I + + + A++L EM+ G++PN +T +S I + + + I
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 294 RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGDAS 349
R + N+ +A+ID + K G + A +++++ RS + ++++I +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
A + M+ P+ VT ++ + VD+ ++F M S+ G+ Y +
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM-SQRGLVGNTVTYTTL 434
Query: 410 VGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHLFE--I 464
+ +A A +M + P+ + LL+G G + ++L +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 465 EPESSGNYIIMANLYSCAGRWE 486
EP+ Y IM AG+W+
Sbjct: 495 EPDIY-TYNIMIEGMCKAGKWK 515
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 116/305 (38%), Gaps = 56/305 (18%)
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
P + ++ L+S + + N F+ I +M+ G+ N T I F S L +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGAR---------QVFDQARSRSLVIWTAII 339
++ Y+ +I ++++ GF HG R Q+ + V +T +I
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLN-----GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 340 TAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGI 399
H AS A+ L +M+ G QPD VT AV+ G D A + N M + I
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA-KI 249
Query: 400 QPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKF 456
+ V Y+ ++ L + +A +EM + P+ + +L++ YG
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG------- 302
Query: 457 ACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLI 516
RW +ASR+ M E ++ + + S +
Sbjct: 303 ---------------------------RWSDASRLLSDMIERKIN----PNLVTFSALID 331
Query: 517 AFIAK 521
AF+ K
Sbjct: 332 AFVKK 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCF--VLRRGLETDIFVENALV 74
L + ++ I+P+ T ++++ A K VK + +++R ++ +IF ++L+
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKG----KLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 75 TCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
+C +G A+++ + M +D V++N++I G+ + ++ L+ EM G +
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG-L 424
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V + VT +++ Q++D V + G+ ++ N ++ K G L A
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 191 LFEEMS----EKDDVSYGSIISGYMAYG 214
+FE + E D +Y +I G G
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 58/421 (13%)
Query: 112 GFYEECKRLYMEMLSVG---SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
G E +R++ +ML+ G SV V + + + C ++ ++ V E G+ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII---VFREFPEVGVCWN 245
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFR 224
+ N VI + G + A L M K D +SY ++++GY +G + K
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV----- 300
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
W L+ M+ GLKPN+ S I L L
Sbjct: 301 ---------WK-----------------LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIIT 340
+E + IR+ + V T +ID + K G I A + F + SR + + +TAII+
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
+ GD A L+ +M G++PD VT T ++ +G + +A+++ N M + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCS 453
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVE----- 452
P V Y ++ L + G L A + + EM ++P+ + +++NG G++E
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 453 TGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMS 512
G+F L + Y + + Y +G ++A + K M G+ + + M+
Sbjct: 514 VGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 513 G 513
G
Sbjct: 570 G 570
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 173/420 (41%), Gaps = 47/420 (11%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ P+S+ S++ + +EA ++R+G+ D V L+ +C+ G+I
Sbjct: 311 GLKPNSYIYGSIIGLLCR--ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 85 LARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
A K F M RD +++ ++I G+ Q G E +L+ EM G + PD VT +
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTEL 427
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM----S 196
+ ++ + VH + ++G ++ +I K G LD A EL EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAID 252
+ + +Y SI++G G + +A + E GL+ T+ L+ ++ + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
+++EM G GL+P VT + F L G+++ + + + N AT
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN---ATT------ 598
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
+ +++ Y + A +Y M G+ PD T
Sbjct: 599 ----------------------FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
++ + + EAW +F M K G V Y+ ++ + K EA + +M E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 174/412 (42%), Gaps = 51/412 (12%)
Query: 51 VKEAHCFVLR---RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNS 103
+KEAH +L +G D+ + +V YCR GE+ K+ + M + ++ + S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 104 MIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES 163
+IG + E + + EM+ G ++PD V +++ + D+ + ++
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 164 GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKA 219
I D+ A+I+ + + G + A +LF EM E D V++ +I+GY G + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 220 RDVFRGME----NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
V M +P + T+ LI G+ + + A +L+ EM GL+PN +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN---------I 491
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
F+Y S + G C NI A ++ + G + V +
Sbjct: 492 FTYNSIVNG----------LCKSGNIEEAVKLVGEFEAAGL------------NADTVTY 529
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
T ++ AY G+ A + +ML G+QP VT ++ G++++ K+ N M +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNG 444
K GI P + +V L A +M + P K + L+ G
Sbjct: 590 K-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ P+ FT S++ + S + + VK F GL D L+ YC+ GE+
Sbjct: 486 GLQPNIFTYNSIVNGLCK-SGNIEEAVKLVGEFE-AAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 85 LARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
A+++ M + V++N ++ G+ G E+ ++L ML+ G + P+ T S+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSL 602
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK-- 198
++ +L ++ + G+ D ++ + K ++ A LF+EM K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 199 --DDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
+Y +I G++ ++AR+VF M GL
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 58/421 (13%)
Query: 112 GFYEECKRLYMEMLSVG---SVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
G E +R++ +ML+ G SV V + + + C ++ ++ V E G+ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII---VFREFPEVGVCWN 245
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFR 224
+ N VI + G + A L M K D +SY ++++GY +G + K
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV----- 300
Query: 225 GMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
W L+ M+ GLKPN+ S I L L
Sbjct: 301 ---------WK-----------------LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 285 GKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIIT 340
+E + IR+ + V T +ID + K G I A + F + SR + + +TAII+
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 341 AYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
+ GD A L+ +M G++PD VT T ++ +G + +A+++ N M + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCS 453
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVE----- 452
P V Y ++ L + G L A + + EM ++P+ + +++NG G++E
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 453 TGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWIEMS 512
G+F L + Y + + Y +G ++A + K M G+ + + M+
Sbjct: 514 VGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 513 G 513
G
Sbjct: 570 G 570
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 173/420 (41%), Gaps = 47/420 (11%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ P+S+ S++ + +EA ++R+G+ D V L+ +C+ G+I
Sbjct: 311 GLKPNSYIYGSIIGLLCR--ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 85 LARKVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
A K F M RD +++ ++I G+ Q G E +L+ EM G + PD VT +
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTEL 427
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEM----S 196
+ ++ + VH + ++G ++ +I K G LD A EL EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 197 EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAID 252
+ + +Y SI++G G + +A + E GL+ T+ L+ ++ + A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 253 LVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYA 312
+++EM G GL+P VT + F L G+++ + + + N AT
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN---ATT------ 598
Query: 313 KLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTA 372
+ +++ Y + A +Y M G+ PD T
Sbjct: 599 ----------------------FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 373 VLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE 432
++ + + EAW +F M K G V Y+ ++ + K EA + +M E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 174/412 (42%), Gaps = 51/412 (12%)
Query: 51 VKEAHCFVLR---RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNS 103
+KEAH +L +G D+ + +V YCR GE+ K+ + M + ++ + S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 104 MIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNES 163
+IG + E + + EM+ G ++PD V +++ + D+ + ++
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 164 GIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKA 219
I D+ A+I+ + + G + A +LF EM E D V++ +I+GY G + A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 220 RDVFRGME----NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
V M +P + T+ LI G+ + + A +L+ EM GL+PN +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN---------I 491
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIW 335
F+Y S + G C NI A ++ + G + V +
Sbjct: 492 FTYNSIVNG----------LCKSGNIEEAVKLVGEFEAAGL------------NADTVTY 529
Query: 336 TAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHS 395
T ++ AY G+ A + +ML G+QP VT ++ G++++ K+ N M +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 396 KYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNG 444
K GI P + +V L A +M + P K + L+ G
Sbjct: 590 K-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEIG 84
G+ P+ FT S++ + S + + VK F GL D L+ YC+ GE+
Sbjct: 486 GLQPNIFTYNSIVNGLCK-SGNIEEAVKLVGEFE-AAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 85 LARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSV 140
A+++ M + V++N ++ G+ G E+ ++L ML+ G + P+ T S+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSL 602
Query: 141 MQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK-- 198
++ +L ++ + G+ D ++ + K ++ A LF+EM K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 199 --DDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
+Y +I G++ ++AR+VF M GL
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 214/512 (41%), Gaps = 82/512 (16%)
Query: 65 TDIFVENALVTCYCRCGEIGL------------ARKVFDG-------------MPERDTV 99
+D+F N L +CY +C +R+V DG +PE T+
Sbjct: 138 SDVF--NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 100 SWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGF 159
S +++ G + + L+ +M+SVG + PD V+++ + KDL E+
Sbjct: 196 S--ALLHGLVKFRHFGLAMELFNDMVSVG-IRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 160 VNESGIEVDLPLCNAVI---------------------------------AMYAKCGSLD 186
+ +G +V++ N +I +Y C +
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 187 Y--ARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNA 236
+ E+ +EM + + S++ G G + +A ++ + + + P L +NA
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
LI + + F A L M GL+PN VT + I +F L +
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 297 YDQNIYVATAIIDTYAKLGFIHGAR----QVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
++Y ++I+ + K G I A ++ ++ ++V +T+++ Y + G + AL
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
LY +M GI P T T +L+ +GL+ +A K+FN M +++ ++P Y M+
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEG 551
Query: 413 LSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPE-S 468
G +S+A +F+ EM I P ++ L++G + G K D L + E +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 469 SGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
Y + + + G+ EEA V + M + GV
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 203/509 (39%), Gaps = 65/509 (12%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRG---LETDIFVEN 71
L+L VD G+SP+ F +++ ++ + EA R G L + +
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKG-----RKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 72 ALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
L+ +CR G++ A M + +NS+I G+ + G + EM++
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN- 465
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
+ P VT S+M + + ++ + GI + +++ + G +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 188 ARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL--DTWN--ALIS 239
A +LF EM+E + V+Y +I GY G + KA + + M G+ DT++ LI
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G+ A V + + N + + F L V ++R D
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 300 NIYVATAIIDTYAKLGFIHGARQVF--------DQARSRSLVIWTAIITAYAAHGDASLA 351
++ +ID K H R++F D+ VI+T++I A + GD A
Sbjct: 646 DLVCYGVLIDGSLK----HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
G++ M++ G P++VT TAV+ +G V+EA + + M + P Y C +
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLD 760
Query: 412 VLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGN 471
+L++ E+ ++ + + A+L G ++
Sbjct: 761 ILTKG-----------EVDMQKAVELHNAILKGLLA--------------------NTAT 789
Query: 472 YIIMANLYSCAGRWEEASRVRKRMEEIGV 500
Y ++ + GR EEAS + RM GV
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGV 818
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 190/465 (40%), Gaps = 32/465 (6%)
Query: 11 YRHL---LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDI 67
+RH ++LF V GI PD + T V++++ KE + G + +I
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC--ELKDLSRAKEMIAHMEATGCDVNI 262
Query: 68 FVENALVTCYCRCGE----IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYME 123
N L+ C+ + +G+ + + + D V++ +++ G + +E + E
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 124 MLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCG 183
ML + P + S+++ + + + + V + G+ +L + NA+I K
Sbjct: 323 MLCL-RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 184 SLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWN 235
A LF+ M + +DV+Y +I + G + A M + GL +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 236 ALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRR 295
+LI+G + A + EM L+P VT S + + + ++ +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 296 CYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLA 351
+IY T ++ + G I A ++F++ ++ V + +I Y GD S A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 352 LGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVG 411
+M + GI PD + ++ +G EA + +H G L E C G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK--GNCELNE--ICYTG 617
Query: 412 VLS---RAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGD 450
+L R GKL EA EM ++ +G L++G+ + D
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 182/437 (41%), Gaps = 57/437 (13%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTC 76
A ++ + P T TS++ S K ++ H + +G+ I+ L++
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKG-KINKALRLYH-EMTGKGIAPSIYTFTTLLSG 516
Query: 77 YCRCGEIGLARKVFDGMPE----RDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVP 132
R G I A K+F+ M E + V++N MI GY + G + EM G +VP
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-IVP 575
Query: 133 DGVTIVSVMQA------CGQSKDLVLGME--------------VHGFVNESGIEVDLPLC 172
D + ++ ++K V G+ +HGF E +E L +C
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 173 NAVIA----MYAKC------GSLDYA-RELF----EEMSEK----DDVSYGSIISGYMAY 213
++ + C GSL + R+LF +EM ++ DDV Y S+I
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 214 GFVVKARDVFRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTL 269
G +A ++ M N P T+ A+I+G+ + + A L +MQ PN VT
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 270 ASTIPLFSYFS-NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ-- 326
+ + + +++ E+H AI + N +I + + G I A ++ +
Sbjct: 756 GCFLDILTKGEVDMQKAVELHN-AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 327 --ARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVD 384
S + +T +I D A+ L+ M + GI+PD+V ++ C +G +
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 385 EAWKIFNTMHSKYGIQP 401
+A ++ N M + G+ P
Sbjct: 875 KATELRNEM-LRQGLIP 890
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITA 341
L+ K VH ++ +++ Y+ G + A VF++ ++L W II
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRC 329
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQP 401
+A +G A+ ++++ + G PD + AC G VDE F +M YGI P
Sbjct: 330 FAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAP 389
Query: 402 LVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHL 461
+E Y +V + + G L EA +F+ MP+EP+ W L+N + V+G++E G + C +
Sbjct: 390 SIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDY-CAEV 448
Query: 462 FEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV-HKIRGSSWIEMSGRLIAFIA 520
E + N E ++KR G+ H ++ S + F A
Sbjct: 449 VEFLDPTRLNKQSREGFIPVKASDVEKESLKKRS---GILHGVKSS--------MQEFRA 497
Query: 521 KDVSNERSDEIYTYLEGLFCMMREEGYILQEEL 553
D + +DE++ L L M E GY+ + +
Sbjct: 498 GDTNLPENDELFQLLRNLKMHMVEVGYVAETRM 530
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 38/256 (14%)
Query: 118 KRLY-MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
K LY +++L+ + V D ++ + + CG+++ L VHG ++ S +DL + ++
Sbjct: 237 KALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLL 296
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
MY+ CG + A +FE+MSEK+ L+TW
Sbjct: 297 EMYSNCGLANEAASVFEKMSEKN-------------------------------LETWCI 325
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
+I +N + E AID+ + G P+ ++ G +H ++ R
Sbjct: 326 IIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHFESMSRD 384
Query: 297 YD--QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLV-IWTAIITAYAAHGDASLALG 353
Y +I ++++ YA GF+ A + ++ V +W ++ HG+ L LG
Sbjct: 385 YGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN--LELG 442
Query: 354 LYAQMLDSGIQPDQVT 369
Y + + P ++
Sbjct: 443 DYCAEVVEFLDPTRLN 458
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 66 DIFVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
D+ + L+ Y CG A VF+ M E++ +W +I +++ GF E+ ++
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLG-MEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
G+ +PDG + ACG D+ G + + GI + +++ MYA G
Sbjct: 348 EEGN-IPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 185 LDYARELFEEMSEKDDV 201
LD A E E M + +V
Sbjct: 407 LDEALEFVERMPMEPNV 423
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 180/447 (40%), Gaps = 56/447 (12%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGF 113
+++ G E D + L+ C G + A ++ D M E ++ N+++ G G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCN 173
+ L M+ G P+ VT V++ +S L ME+ + E I++D +
Sbjct: 193 VSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 174 AVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGF----VVKARDVFRG 225
+I K GSLD A LF EM K D + Y ++I G+ G RD+ +
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 226 MENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGG 285
P + ++ALI V+ A +L +EM G+ P+ VT S I F + L
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 286 KEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITA 341
+ + + NI +I+ Y K I ++F + R + V + +I
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 342 YAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG-------------------- 381
+ G +A L+ +M+ ++PD V+ +L +G
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 382 ---------------LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI 426
VD+AW +F ++ K G++P V+ Y M+G L + G LSEA
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 427 SEMPIE---PSAKAWGALLNGASVYGD 450
+M + P+ + L+ GD
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 19/283 (6%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHC--FVLRRGLETD 66
G R +L + GISPD+ T TS++ + + K H ++ +G +
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN----QLDKANHMLDLMVSKGCGPN 386
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYM 122
I N L+ YC+ I ++F M R DTV++N++I G+ + G E K L+
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
EM+S V PD V+ ++ + + +E+ + +S +E+D+ + N +I
Sbjct: 447 EMVS-RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 183 GSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTW 234
+D A +LF + K D +Y +I G G + +A +FR ME +P T+
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFS 277
N LI + + L+ E++ G +A T+ + + S
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 181/402 (45%), Gaps = 56/402 (13%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTV----SWNSMIGGYSQCGFYEEC 117
G++ ++++ + CR ++ A K+F+ M + + ++++MI GY + G +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIA 177
LY E+L V ++P+ V +++ ++++LV + + + G++ +L + N +I
Sbjct: 289 YGLYKEIL-VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 178 MYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGMEN----P 229
+ K G++ A L EM D +Y +I+G V +A +F+ M+N P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 230 GLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVH 289
T+N+LI G + E A+DL EM SG++PN +T ++
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST------------------ 449
Query: 290 AYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAH 345
+ID Y + I A ++ + + + V +TA+I A+
Sbjct: 450 -----------------LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 346 GDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQ 405
+ AL LY+ ML++GI P+ T ++ G + A + + + V
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV-G 551
Query: 406 YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNG 444
+ C++ L + G + A++F S+M I P ++ ++L G
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 32/338 (9%)
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G Y + ++L EM S+G + + ++ C +K + ++ + + G+ +L
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK-MEEAEKMFELMKKHGVLPNLYT 271
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGME 227
+A+I Y K G++ A L++E+ + V +G+++ G+ +V AR +F M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 228 ----NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLR 283
+P L +N LI G ++ A+ L+ EM+ L P+ T I +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 284 GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----------- 332
+ ++ ++ I+ ++A TY L IHG + ++ ++ L
Sbjct: 392 EANRL----FQKMKNERIFPSSA---TYNSL--IHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 333 --VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
+ ++ +I Y D A+GLY +M GI PD VT TA++ A + EA +++
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISE 428
+ M + GI P +AC+V + G+LS A F E
Sbjct: 503 SDM-LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 118/257 (45%), Gaps = 23/257 (8%)
Query: 25 GISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF----VENALVTCYCRC 80
+SPD FT T ++ + V EA+ + ++ IF N+L+ YC+
Sbjct: 369 NLSPDVFTYTILINGLCIED-----QVAEAN-RLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 81 GEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVT 136
+ A + M E + ++++++I GY + LY EM ++ +VPD VT
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM-TIKGIVPDVVT 481
Query: 137 IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMS 196
+++ A + ++ + ++ + E+GI + ++ + K G L A + ++E +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 197 EK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNNWFE 248
++ + V + +I G G++++A F M + P + ++ +++ G +Q
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Query: 249 GAIDLVREMQGSGLKPN 265
+ L +M +G+ PN
Sbjct: 602 DTMMLQCDMIKTGILPN 618
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 203 YGSIISGYMAYGFVVKARDVFRGME-NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSG 261
+ +I ++ G +A V R M+ +P ++++G+V+ F+ + M G
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRG 194
Query: 262 LKPNA----VTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFI 317
L P+ V Y + E+ + I+ N+Y+ T I + +
Sbjct: 195 LVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK----PNVYIYTIYILDLCRDNKM 250
Query: 318 HGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAV 373
A ++F+ + +L ++A+I Y G+ A GLY ++L + + P+ V +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 374 LTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP--- 430
+ + + A +F M K+G+ P + Y C++ ++G + EA +SEM
Sbjct: 311 VDGFCKARELVTARSLFVHM-VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 431 IEPSAKAWGALLNGASVYGDV 451
+ P + L+NG + V
Sbjct: 370 LSPDVFTYTILINGLCIEDQV 390
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 184/416 (44%), Gaps = 34/416 (8%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCG----- 112
G +F N ++ C C+ G++ AR +F+ M R DTV++NSMI G+ + G
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 113 --FYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
F+EE K + E PD +T +++ + L +G+E + + +G++ ++
Sbjct: 317 VCFFEEMKDMCCE--------PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGM 226
+ ++ + K G + A + + +M ++ +Y S+I G + A + M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 227 ENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
G++ T+ ALI G+ + A +L +M +G+ PN + + I F N+
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAI 338
E+ R ++ + I L I A+ V ++ + + +I+T +
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
+ AY G+ + L L +M + I+ VT ++ + LV +A FN + + +G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDV 451
+Q + M+ L + ++ A +M + P A+ +L++G G+V
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGL 231
CN ++ +AK G D + F++M + G+ P +
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDM-----IGAGA----------------------RPTV 262
Query: 232 DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAY 291
T+N +I M + E A L EM+ GL P+ VT S I F L
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGD 347
C + ++ A+I+ + K G + + + + + L V ++ ++ A+ G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
A+ Y M G+ P++ T T+++ A G + +A+++ N M + G++ V Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-LQVGVEWNVVTYT 441
Query: 408 CMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNG 444
++ L A ++ EA + +M + P+ ++ AL++G
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 159/399 (39%), Gaps = 53/399 (13%)
Query: 4 AYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKA---IASPSFSYYKPVKEAHCFVLR 60
A+ G+ + + + G+ P+ +T TS++ A I + S ++ + +L+
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE-----MLQ 430
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTV----SWNSMIGGYSQCGFYEE 116
G+E ++ AL+ C + A ++F M + S+N++I G+ + +
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
L E+ G + PD + + + + + V + E GI+ + + ++
Sbjct: 491 ALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 177 AMYAKCGSLDYARELFEEMSEKDD----VSYGSIISGYMAYGFVVKARDVFRGMENP-GL 231
Y K G+ L +EM E D V++ +I G V KA D F + N GL
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 232 DT----WNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
+ A+I G+ ++N E A L +M GL P+ S + N + G
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD-----GNFKQGNV 664
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGD 347
+ A A+R D A++G L+ +T+++ +
Sbjct: 665 LEALALR--------------DKMAEIGM------------KLDLLAYTSLVWGLSHCNQ 698
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEA 386
A +M+ GI PD+V +VL G +DEA
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 159/346 (45%), Gaps = 23/346 (6%)
Query: 141 MQACGQSKDLVLGME----VHGF---VNESGIEVDLPLCNAVIAMYAKCGSLDYARELFE 193
++ CG D ++ + + GF + ++G +++ + N ++ + K G++ A+++F+
Sbjct: 205 IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFD 264
Query: 194 EMSEKD----DVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNN 245
E++++ VS+ ++I+GY G + + + ME P + T++ALI+ + + N
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 246 WFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVAT 305
+GA L EM GL PN V + I S + KE + + + +I +
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYN 384
Query: 306 AIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDS 361
+++ + K G + AR + D R L + +T +I + GD AL + +M +
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN 444
Query: 362 GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSE 421
GI+ D+V +A++ G V +A + M + GI+P Y M+ + G
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREM-LRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 422 AAKFISEMPIE---PSAKAWGALLNGASVYGDVETGKFACDHLFEI 464
K + EM + PS + LLNG G ++ D + I
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 172/382 (45%), Gaps = 31/382 (8%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERD----TVSWNSMIGGYSQCGF 113
+L G +++V N L+ +C+ G I A+KVFD + +R VS+N++I GY + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 114 YEECKRLYMEMLSVGSVVPDGVTIVSVMQA-CGQSKDLVLGME-VHGFVNE---SGIEVD 168
+E RL +M PD T +++ A C ++K M+ HG +E G+ +
Sbjct: 291 LDEGFRLKHQM-EKSRTRPDVFTYSALINALCKENK-----MDGAHGLFDEMCKRGLIPN 344
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFR 224
+ +I +++ G +D +E +++M K D V Y ++++G+ G +V AR++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 225 GMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFS 280
GM GL T+ LI G + E A+++ +EM +G++ + V ++ +
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 281 NLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR----SLVIWT 336
+ + +R + T ++D + K G ++ + +S S+V +
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 337 AIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSK 396
++ G A L ML+ G+ PD +T +L H + + + +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE--GHHRHANSSKRYIQK--PE 580
Query: 397 YGIQPLVEQYACMVGVLSRAGK 418
GI + Y +V L RA K
Sbjct: 581 IGIVADLASYKSIVNELDRASK 602
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 58/257 (22%)
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIG 106
+KE++ +L +GL+ DI + N LV +C+ G++ AR + DGM R D +++ ++I
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 107 GYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
G+ + G D+ +E+ ++++GIE
Sbjct: 424 GFCRGG------------------------------------DVETALEIRKEMDQNGIE 447
Query: 167 VDLPLCNAVIAMYAKCGSLDYA----RELFEEMSEKDDVSYGSIISGYMAYGFVVKARDV 222
+D +A++ K G + A RE+ + DDV+Y ++ + G +
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Query: 223 FRGMEN----PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSY 278
+ M++ P + T+N L++G+ + + A L+ M G+ P+ +T
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT---------- 557
Query: 279 FSNLRGGKEVHAYAIRR 295
++ L G HA + +R
Sbjct: 558 YNTLLEGHHRHANSSKR 574
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 165/356 (46%), Gaps = 25/356 (7%)
Query: 156 VHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYM 211
V+ ++ SG+ +++ N ++ K G ++ ++ EK D V+Y ++IS Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 212 AYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
+ G + +A ++ M +PG+ T+N +I+G+ ++ +E A ++ EM SGL P++
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
T S + ++ ++V + R ++ ++++ + + G + A F+
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 328 RSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV 383
+ L VI+T +I Y G S+A+ L +ML G D VT +L ++
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 384 DEAWKIFNTMHSK------YGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKA 437
EA K+FN M + Y + L++ + C +G L A +L + K E I
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGH-CKLGNLQNAMELFQKMK---EKRIRLDVVT 517
Query: 438 WGALLNGASVYGDVETGKFACDHLF--EIEPESSGNYIIMANLYSCAGRWEEASRV 491
+ LL+G GD++T K + EI P + +Y I+ N G EA RV
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILP-TPISYSILVNALCSKGHLAEAFRV 572
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 183/447 (40%), Gaps = 22/447 (4%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
++ AYS GL +L + G SP +T +V+ + Y+ KE +LR
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK--HGKYERAKEVFAEMLR 333
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMPERDTVS----WNSMIGGYSQCGFYEE 116
GL D +L+ C+ G++ KVF M RD V ++SM+ +++ G ++
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
+Y + ++PD V ++Q + + + M + + + G +D+ N ++
Sbjct: 394 A-LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 177 AMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD 232
K L A +LF EM+E+ D + +I G+ G + A ++F+ M+ +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 233 ----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
T+N L+ G + + A ++ +M + P ++ + + +L V
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI----WTAIITAYAA 344
I + + + ++I Y + G ++ S V + +I +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 345 HGDASLALGLYAQMLDS--GIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPL 402
+ S A GL +M + G+ PD T ++L + EA + M + G+ P
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER-GVNPD 691
Query: 403 VEQYACMVGVLSRAGKLSEAAKFISEM 429
Y CM+ L+EA + EM
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 165/378 (43%), Gaps = 41/378 (10%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIA-----SPSFSYYKPVKEAHCFVLRRGLETDIFVEN 71
+F+ + PD +S++ + Y+ VKEA GL D +
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-------GLIPDNVIYT 414
Query: 72 ALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
L+ YCR G I +A + + M ++ D V++N+++ G + E +L+ EM +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TE 473
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
++ PD T+ ++ + +L ME+ + E I +D+ N ++ + K G +D
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 188 ARELFEEMSEKD----DVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALIS 239
A+E++ +M K+ +SY +++ + G + +A V+ M + P + N++I
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 240 GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQ 299
G ++ + +M G P+ ++ + I F N+ A+ + + ++
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS-----KAFGLVKKMEE 648
Query: 300 -------NIYVATAIIDTYAKLGFIHGA----RQVFDQARSRSLVIWTAIITAYAAHGDA 348
+++ +I+ + + + A R++ ++ + +T +I + + +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 349 SLALGLYAQMLDSGIQPD 366
+ A ++ +ML G PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 27/296 (9%)
Query: 160 VNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKA 219
+ SG+ L + N++ + ++ CGS +D + +I Y+ + +A
Sbjct: 140 IRRSGVS-RLEIVNSLDSTFSNCGS--------------NDSVFDLLIRTYVQARKLREA 184
Query: 220 RDVFRGMENPG----LDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPL 275
+ F + + G +D NALI +V+ W E A + +E+ SG+ N TL +
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244
Query: 276 FSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFD----QARSRS 331
+ + + +I +I Y+ G + A ++ + + S
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
+ + +I HG A ++A+ML SG+ PD T ++L G V E K+F+
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKF---ISEMPIEPSAKAWGALLNG 444
M S+ + LV ++ M+ + +R+G L +A + + E + P + L+ G
Sbjct: 365 DMRSRDVVPDLV-CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 191/431 (44%), Gaps = 51/431 (11%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEEC 117
G DI+ N + CR ++G A + F M +R D VS+ +I G + G +
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 118 KRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGME-VHGFVNESGIEVDLPLCNAVI 176
++ M+ G V PD +++ ++ + L E V + + +++ + NA+I
Sbjct: 169 VEIWNAMIRSG-VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
+ + K G ++ A L MS+ G E P L T+N
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKI--------------------------GCE-PDLVTYNV 260
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
L++ NN + A ++ EM SG++ +A + L + + + + ++
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQ---LLKRHCRVSHPDKCYNFMVKEM 317
Query: 297 YDQ---NIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVI----WTAIITAYAAHGDAS 349
+ ++ + +I+T+ + A ++F++ R + +V+ +T++I A+ G++S
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 350 LALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACM 409
+A L QM + G+ PD++ T +L SG VD+A+ +FN M ++ I P Y +
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM-IEHEITPDAISYNSL 436
Query: 410 VGVLSRAGKLSEAAKFISEM------PIEPSAK-AWGALLNGASVYGDVETGKFACDHLF 462
+ L R+G+++EA K +M P E + K G L+ G + + D F
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 463 EIEPESSGNYI 473
++ + S I
Sbjct: 497 TLDRDVSDTLI 507
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 203/502 (40%), Gaps = 89/502 (17%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF + + P + VL IA S +Y + H + G+ D++ N ++
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAK-SKNYDLVISLFHHMEVC-GIGHDLYSYNIVI 111
Query: 75 TCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
C CRC +A V M E D V+ +S+I G+ Q G+
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ-----------------GNR 154
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
V D + +VS M+ E G D+ + N +I K G ++ A E
Sbjct: 155 VFDAIDLVSKME-------------------EMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGA 250
LF+ M E+D V ++ T+N+L++G+ + + A
Sbjct: 196 LFDRM-ERDGVRADAV--------------------------TYNSLVAGLCCSGRWSDA 228
Query: 251 IDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDT 310
L+R+M + PN +T + I +F +++ RRC D +++ ++I+
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 311 YAKLGFIHGARQVFDQARSR----SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPD 366
G + A+Q+ D ++ +V + +I + L+ +M G+ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 367 QVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFI 426
+T ++ +G D A +IF+ M S+ P + Y+ ++ L ++ +A
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 427 SEMP---IEPSAKAWGALLNGASVYGDVETG-----KFACDHLFEIEPESSGNYIIMANL 478
M IE + +++G G+VE +C L +P+ +Y M +
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL---KPDVV-SYTTMISG 460
Query: 479 YSCAGRWEEASRVRKRMEEIGV 500
+ +W+++ + ++M+E G+
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGL 482
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 17 LFASSVDAGISPDSFTVTSVLKA-IASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVT 75
L V I P+ T T+V+ + FS + E + RR ++ D+F N+L+
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE---MTRRCVDPDVFTYNSLIN 287
Query: 76 CYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVV 131
C G + A+++ D M + D V++N++I G+ + +E +L+ EM G +V
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG-LV 346
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS--LDYAR 189
D +T +++Q Q+ E+ S ++ + I +Y C + ++ A
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIF-----SRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 190 ELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGM 241
LFE M E D +Y +I G G V A D+FR + GL ++ +ISG
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 242 VQNNWFEGAIDLVREMQGSGLKP 264
+ ++ + L R+MQ GL P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/605 (19%), Positives = 235/605 (38%), Gaps = 93/605 (15%)
Query: 2 LIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-PSFSYYKPVKEAHCFVLR 60
L AY G L +F + + P+ T ++L + PS +E +++
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 61 RGLETDIFVENALVTCYCRCGEIG-----LARKVFDGMPERDTVSWNSMIGGYSQCGFYE 115
G+ ++ N LV YC G++ L R V + D V++N+++ S+ G
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 116 ECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAV 175
+ K L ++M G +VP+ VT +++ + L ++ + ++ + DL N +
Sbjct: 258 DLKELLLDMKKNG-LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL 316
Query: 176 IAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDVFRGMEN--- 228
I GS+ EL + M + D V+Y ++I G G ++AR + MEN
Sbjct: 317 INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV 376
Query: 229 -------------------------------------PGLDTWNALISGMVQNNWFEGAI 251
P + T++ LI ++ GA+
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL 436
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTY 311
+++REM G+K N +TL + + L + A +R + + +I +
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Query: 312 AKLGFIHGARQVFDQAR----SRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQ 367
+ + A +++D+ + + ++ + ++I HG LA+ + ++ +SG+ PD
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 368 VTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFIS 427
T +++ G V++A++ +N K+ +P + Y C +
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNE-SIKHSFKP--DNYTCNI----------------- 596
Query: 428 EMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEE 487
LLNG G E + L E + Y M + + + +E
Sbjct: 597 -------------LLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKE 643
Query: 488 ASRVRKRMEEIGVHKIRGSSWIEMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
A + MEE G+ R + I+ + +D +DE+ G F M+ +
Sbjct: 644 AYDLLSEMEEKGLEPDRFT-----YNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ 698
Query: 548 ILQEE 552
+ E+
Sbjct: 699 VETEK 703
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 184/454 (40%), Gaps = 64/454 (14%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYK--PVKEAHCFV 58
+L A S G L +L G+ P+ T +++ + Y K +KEA V
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV-------YGYCKLGSLKEAFQIV 298
Query: 59 ---LRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQC 111
+ + D+ N L+ C G + ++ D M + D V++N++I G +
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVT-IVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLP 170
G E ++L ME + V + VT +S+ C + K + +V V+ G D+
Sbjct: 359 GLSLEARKL-MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 171 LCNAVIAMYAKCGSLDYARELFEEMSEK-------------------------------- 198
+ +I Y K G L A E+ EM +K
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 199 -------DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGMVQNNWF 247
D+V+YG++I G+ V KA +++ M+ P + T+N+LI G+ +
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAI 307
E A++ E+ SGL P+ T S I + + E + +I+ + + Y +
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 308 IDTYAKLGFIHGARQVFD---QARSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQ 364
++ K G A F+ + R V + +I+A+ A L ++M + G++
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 365 PDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
PD+ T + ++ G + E ++ K+G
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 197/465 (42%), Gaps = 47/465 (10%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAI-----ASPSFSYYKPVKEAH 55
++ AY+ +G+ ++L + G PD FT T++L + S ++ ++ A
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 56 CFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQC 111
C + +I NA + Y G+ K+FD + D V+WN+++ + Q
Sbjct: 415 C-------KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 112 GFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPL 171
G E ++ EM G VP+ T +++ A + M V+ + ++G+ DL
Sbjct: 468 GMDSEVSGVFKEMKRAG-FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 172 CNAVIAMYAKCGSLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVK-----ARDV 222
N V+A A+ G + + ++ EM + ++++Y S++ Y A G + A +V
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY-ANGKEIGLMHSLAEEV 585
Query: 223 FRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL 282
+ G+ P L+ + + A E++ G P+ TL S + ++ +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 283 RGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGA-----------RQVFDQARSRS 331
V Y R + T + TY L ++H R++ +
Sbjct: 646 AKANGVLDYMKERGF-------TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 332 LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFN 391
++ + +I AY + A ++++M +SGI PD +T + + A + +EA +
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 392 TMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM-PIEPSA 435
M K+G +P Y +V + + EA F+ ++ ++P A
Sbjct: 759 YM-IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHA 802
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 39/398 (9%)
Query: 175 VIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME--- 227
+I+M K G + A +F + E D SY S+IS + G +A +VF+ ME
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 228 -NPGLDTWNALIS--GMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRG 284
P L T+N +++ G + W LV +M+ G+ P+A T + I S +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPW-NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 285 GKEV--HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQ----ARSRSLVIWTAI 338
+V A YD+ Y A++D Y K A +V ++ S S+V + ++
Sbjct: 298 AAQVFEEMKAAGFSYDKVTY--NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 339 ITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYG 398
I+AYA G A+ L QM + G +PD T T +L+ +G V+ A IF M + G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-G 414
Query: 399 IQPLVEQYACMVGVLSRAGKLSEAAKFISEMPI---EPSAKAWGALLNGASVYG----DV 451
+P + + + + GK +E K E+ + P W LL +V+G D
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL---AVFGQNGMDS 471
Query: 452 E-TGKFACDHLFEIEPE-SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSSWI 509
E +G F PE + N +I A YS G +E+A V +RM + GV + +
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISA--YSRCGSFEQAMTVYRRMLDAGV-----TPDL 524
Query: 510 EMSGRLIAFIAKDVSNERSDEIYTYLEGLFCMMREEGY 547
++A +A+ E+S+++ +E C E Y
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 172/396 (43%), Gaps = 57/396 (14%)
Query: 16 DLFASSVDAGISPDSFTVTSVLKAIASP-----SFSYYKPVKEAHCFVLRRGLETDIFVE 70
++F + G S D ++ TS++ A A+ + + +K ++E C + +
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC-------KPTLITY 246
Query: 71 NALVTCYCRCGE-----IGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEML 125
N ++ + + G L K+ D ++N++I + ++E +++ EM
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 126 SVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSL 185
+ G D VT +++ G+S M+V + +G + N++I+ YA+ G L
Sbjct: 307 AAGFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 186 DYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNAL 237
D A EL +M+EK D +Y +++SG+ G V A +F M N P + T+NA
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 238 ISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCY 297
I F + + E+ GL P+ VT + + +F +
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG----------------QNGM 469
Query: 298 DQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYAQ 357
D + + + + GF+ R+ F+ +I+AY+ G A+ +Y +
Sbjct: 470 DSEV---SGVFKEMKRAGFV-PERETFN-----------TLISAYSRCGSFEQAMTVYRR 514
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTM 393
MLD+G+ PD T VL A A G+ +++ K+ M
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 187/443 (42%), Gaps = 60/443 (13%)
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCG-FYEECKRLY 121
+ V NA++ Y R G+ A+++ D M +R D +S+N++I + G
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 122 MEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAK 181
++M+ + PD +T +++ AC + +L ++V + + DL NA+I++Y +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 182 CGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----T 233
CG A LF E+ K D V+Y S++ + K ++V++ M+ G T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 234 WNALISGMVQNNWFEGAIDLVREMQG-SGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYA 292
+N +I + + A+ L ++M+G SG P+A+T I + + V A A
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG-----KANRTVEAAA 459
Query: 293 IRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLAL 352
+ ++ D +L ++A+I YA G A
Sbjct: 460 L--------------------------MSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 353 GLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGV 412
++ ML SG +PD + + +L +AW ++ M S G P Y M+
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD-GHTPSYTLYELMILG 552
Query: 413 LSRAGKLSEAAKFISEM-------PIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIE 465
L + + + K I +M P+E S+ L+ G K A + +E+E
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEISS----VLVKGECFDLAARQLKVAITNGYELE 608
Query: 466 PESSGNYIIMANLYSCAGRWEEA 488
++ + + YS +GR EA
Sbjct: 609 NDT---LLSILGSYSSSGRHSEA 628
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 149/341 (43%), Gaps = 45/341 (13%)
Query: 132 PDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAREL 191
P+ + +++ G+ L +E+ E + + + NA++ +Y++ G A+EL
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 192 FEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWF 247
+ M ++ D +S+ ++I+ + G + P L
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLT-----------PNL---------------- 280
Query: 248 EGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV-HAYAIRRCYDQNIYVATA 306
A++L+ ++ SGL+P+A+T + + S SNL G +V RC +++ A
Sbjct: 281 --AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-QPDLWTYNA 337
Query: 307 IIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+I Y + G A ++F + + V + +++ A+A + +Y QM G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
D++T ++ G +D A +++ M G P Y ++ L +A + EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 423 AKFISEM---PIEPSAKAWGALLNGASVYGDVETGK--FAC 458
A +SEM I+P+ + + AL+ G + G E + F+C
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSC 498
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/410 (18%), Positives = 163/410 (39%), Gaps = 40/410 (9%)
Query: 102 NSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVN 161
SM+ Y + GF E ++ + + G +++A G+ K V G +
Sbjct: 720 KSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLR 779
Query: 162 ESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARD 221
+SG DL N++++ YA+CG + AR +F M
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM-------------------------- 813
Query: 222 VFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSN 281
R +P +++ N L+ + + E +V E+Q G K + ++ + F+ N
Sbjct: 814 -MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 282 LRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS----LVIWTA 337
+ K++++ Y I + +I+ K + A + + + L IW +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 338 IITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY 397
++ Y A D + +Y ++ ++G++PD+ T ++ +E + + M +
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN-L 991
Query: 398 GIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFA 457
G+ P ++ Y ++ + L +A + E+ + K + +
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 458 CDHLFE------IEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVH 501
+ L + IEP + +++M + YS +G +EA +V +++ V
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVS-YSSSGNPQEAEKVLSNLKDTEVE 1099
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 160/397 (40%), Gaps = 66/397 (16%)
Query: 13 HLLDLFASSVDAGISPDSFTVTSVLKAIASPS-----FSYYKPVKEAHCFVLRRGLETDI 67
LLD+ +S G+ PD+ T ++L A + S ++ ++ C + D+
Sbjct: 283 ELLDMVRNS---GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-------QPDL 332
Query: 68 FVENALVTCYCRCGEIGLARKVFDGMPERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+ NA+++ Y RC G E +RL+ME L +
Sbjct: 333 WTYNAMISVYGRC-------------------------------GLAAEAERLFME-LEL 360
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
PD VT S++ A + ++ EV+ + + G D N +I MY K G LD
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 188 ARELFEEMS-----EKDDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALI 238
A +L+++M D ++Y +I V+A + M + P L T++ALI
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 239 SGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
G + E A D M SG KP+ + + + + LRG + A+ + R
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL-----LRGNETRKAWGLYRDMI 535
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAI----ITAYAAHGDA-SLALG 353
+ + + + LG + R Q R + + I++ G+ LA
Sbjct: 536 SDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 354 LYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
+ +G + + TL ++L + + SG EA+++
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELL 632
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 155/371 (41%), Gaps = 29/371 (7%)
Query: 97 DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQAC---GQSKDLVLG 153
D +WNS++ Y+QCG YE + ++ M+ G P +I ++ A G+ ++L +
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP-SPTVESINILLHALCVDGRLEELYVV 844
Query: 154 MEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSYGSIISGY-MA 212
+E + + G ++ ++ +A+ G++ ++++ M Y I Y M
Sbjct: 845 VEE---LQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA---AGYLPTIRLYRMM 898
Query: 213 YGFVVKARDVFRG------MENPG----LDTWNALISGMVQNNWFEGAIDLVREMQGSGL 262
+ K + V ME L WN+++ ++ + + + ++ +GL
Sbjct: 899 IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958
Query: 263 KPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQ 322
+P+ T + I ++ G + D + ++I + K + A Q
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018
Query: 323 VFDQARSRSLVI----WTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACA 378
+F++ S+ L + + ++ G S A L M ++GI+P T+ ++ + +
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078
Query: 379 HSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMP---IEPSA 435
SG EA K+ + + ++ Y+ ++ R+ + + + EM +EP
Sbjct: 1079 SSGNPQEAEKVLSNLKDT-EVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDH 1137
Query: 436 KAWGALLNGAS 446
+ W + AS
Sbjct: 1138 RIWTCFVRAAS 1148
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 36/279 (12%)
Query: 303 VATAIIDTYAKLGFIHGARQVFDQARSRSL-----VIWTAIITAYAAHGDASLALGLYAQ 357
V +++ Y KLGF A QV +QA ++ ++T II AY A +
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 358 MLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAG 417
+ SG PD T ++++A A G + A IFNTM + G P VE ++ L G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM-RDGPSPTVESINILLHALCVDG 836
Query: 418 KLSE---AAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYII 474
+L E + + +M + S + +L+ + G++ F ++ + Y+
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI----FEVKKIY--SSMKAAGYLP 890
Query: 475 MANLYS------CAG-RWEEASRVRKRMEEIGVHKIRGSSWIEMSGRLIAF--------- 518
LY C G R +A + MEE K+ + W M A
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF-KVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 519 --IAKDVSNERSDEIYTYLEGLFCMMR--EEGYILQEEL 553
K+ E + Y L ++C R EEGY+L +++
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 197/490 (40%), Gaps = 53/490 (10%)
Query: 15 LDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALV 74
+DLF V + P +L AIA + + V + + D++ N L+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAK--MNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 75 TCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSV 130
C+CR ++ LA V M E D V+ +S++ GY E L +M V
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-VMEY 181
Query: 131 VPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARE 190
P+ VT + L+ G+ +H +E+ +D
Sbjct: 182 QPNTVTFNT----------LIHGLFLHNKASEAVALID---------------------R 210
Query: 191 LFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDT----WNALISGMVQNNW 246
+ + D +YG++++G G + A + + ME ++ + +I +
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATA 306
A++L EM G++PN VT S I + + + I R + N+ +A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 307 IIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGDASLALGLYAQMLDSG 362
+ID + K G + A +++D+ RS + ++++I + H A ++ M+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 363 IQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEA 422
P+ VT ++ + V+E ++F M S+ G+ Y ++ L +AG A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 423 AKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHL--FEIEPESSGNYIIMAN 477
K +M + P + LL+G YG +E ++L ++EP+ Y IM
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY-TYNIMIE 508
Query: 478 LYSCAGRWEE 487
AG+ E+
Sbjct: 509 GMCKAGKVED 518
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 21/275 (7%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEA-HCF--VLRRGLETDIFVENAL 73
L+ + I PD FT +S++ F + + EA H F ++ + ++ N L
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLING-----FCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 74 VTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGS 129
+ +C+ + ++F M +R +TV++N++I G Q G + ++++ +M+S G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG- 460
Query: 130 VVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYAR 189
V PD +T ++ + L + V ++ +S +E D+ N +I K G ++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 190 ELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMEN----PGLDTWNALISGM 241
+LF +S K + + Y ++ISG+ G +A +FR M+ P T+N LI
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 242 VQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF 276
+++ + +L++EM+ G +A T++ I +
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/539 (20%), Positives = 224/539 (41%), Gaps = 61/539 (11%)
Query: 5 YSFNGLYRHLLD---------LFASSVDAGISPDSFTVTSVLKAIAS-----PSFSYYKP 50
+++N + R++L LF ++PD +T ++++ + + S+ +
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 51 VKEAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIG 106
+++ + D+ + + L+ R + A +F + D V++NSMI
Sbjct: 216 MEQDR-------VSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 107 GYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIE 166
Y + + E + L EM G V+P+ V+ +++ ++ + + V + E
Sbjct: 269 VYGKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 167 VDLPLCNAVIAMYAKCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKARDV 222
+DL CN +I +Y + + A LF + E + VSY +I+ Y +A +
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 223 FRGMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLF-- 276
FR M+ ++ T+N +I + E A +LV+EMQ G++PNA+T ++ I ++
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 277 --------SYFSNLR-GGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQA 327
+ F LR G E+ DQ +Y +I Y ++G + A+++ +
Sbjct: 448 AGKLDRAATLFQKLRSSGVEI---------DQVLY--QTMIVAYERVGLMGHAKRLLHEL 496
Query: 328 RSRSLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAW 387
+ + IT A G A ++ Q +SG D ++ + +
Sbjct: 497 KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 556
Query: 388 KIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASV 447
++F M + G P A ++ + + +A EM E S+
Sbjct: 557 EVFEKMRTA-GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSL 615
Query: 448 YGDVETGKFACDHLFEIEPESSGN----YIIMANLYSCAGRWEEASRVRKRMEEIGVHK 502
Y + + +E + + N ++++A LY A + +ASRV RM E G+ K
Sbjct: 616 YSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILK 674
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 169/375 (45%), Gaps = 26/375 (6%)
Query: 67 IFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYM 122
+F N ++ R + +A +FD M +R D +++++I + + G ++ ++
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS-WL 213
Query: 123 EMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKC 182
+ + V D V ++++ + D + + + SGI DL N++I +Y K
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 183 GSLDYARELFEEMSE----KDDVSYGSIISGYMAYGFVVKARDVFRGME--NPGLD--TW 234
AR L +EM+E + VSY +++S Y+ ++A VF M+ N LD T
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 333
Query: 235 NALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAI- 293
N +I Q + + A L ++ ++PN V+ + + ++ G+ +H + +
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF--GEAIHLFRLM 391
Query: 294 -RRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDA 348
R+ +QN+ +I Y K A + + +SR + + ++ II+ + G
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 349 SLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYAC 408
A L+ ++ SG++ DQV ++ A GL+ A ++ + + I
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPR-----ET 506
Query: 409 MVGVLSRAGKLSEAA 423
+ +L++AG+ EA
Sbjct: 507 AITILAKAGRTEEAT 521
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 42/311 (13%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIAS-----PSFSYYKPVKEAH 55
M+ Y L+R L +AG+ P++ + +++L + S + +KE +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 56 C---------------------------FVLRR-GLETDIFVENALVTCYCRCGEIGLAR 87
C + LR+ +E ++ N ++ Y G A
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 88 KVFDGMPERD----TVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQA 143
+F M +D V++N+MI Y + +E+ L EM S G + P+ +T +++
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG-IEPNAITYSTIISI 444
Query: 144 CGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEKDDVSY 203
G++ L + + SG+E+D L +I Y + G + +A+ L E+ D++
Sbjct: 445 WGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPR 504
Query: 204 GSIISGYMAYGFVVKA----RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQG 259
+ I+ G +A R F E + + +I+ +N + I++ +M+
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 260 SGLKPNAVTLA 270
+G P++ +A
Sbjct: 565 AGYFPDSNVIA 575
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 182/404 (45%), Gaps = 48/404 (11%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVF-DGMPERDTVSWNSMIGGYSQCGFYEECKRL 120
G+ D+F N L+ +C+ G + A + + + DTV++N++I G + G +E +
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
EM+ +G ++PD V+ N +I +
Sbjct: 184 LSEMVKMG-ILPDTVSY-----------------------------------NTLIDGFC 207
Query: 181 KCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKA-RDVFRGMENPGLDTWNALIS 239
K G+ A+ L +E+SE + +++ ++S Y + +A RD+ +P + T++++I+
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIIN 267
Query: 240 GMVQ-NNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD 298
+ + EG + L+REM+ + PN VT + + + R +++ + R
Sbjct: 268 RLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVF----DQARSRSLVIWTAIITAYAAHGDASLALGL 354
++ V T ++D K G + A + F + + ++V +TA++ GD S A +
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLS 414
QML+ + P+ VT ++++ G+++EA + M + + P Y ++ L
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLF 445
Query: 415 RAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGK 455
+AGK A + EM +E + AL+N G ++ K
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/524 (20%), Positives = 206/524 (39%), Gaps = 94/524 (17%)
Query: 9 GLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIF 68
+YRH L L++ V GI D T ++ + + ++ +L ++
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG--DLREAEKTFKMLLEDNQVPNVV 365
Query: 69 VENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEM 124
ALV C+ G++ A + M E+ + V+++SMI GY + G EE L +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 125 LSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGS 184
+VVP+G T +V+ ++ + +E+ + G+E + + +A++ + G
Sbjct: 426 ED-QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 185 LDYARELFEEMSEK---------------------------------------DDVSYGS 205
+ + L ++M K D VSY
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 206 IISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNWFEGAIDLVREMQGSG 261
+ISG + +G V A ++GM G++ T+N +++ + EG + L +M+ G
Sbjct: 545 LISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 262 LKPN-------------------AVTLASTIPLFSYFSNL--------RGGKEVHAYAIR 294
+KP+ A+ + + + L NL K A AI
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 295 RCYDQNI--------YVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAY 342
+ ++ + V +I T KLG A V +R V + +++ Y
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 343 AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPL 402
AL Y+ M+++GI P+ T ++ + +GL+ E K + M S+ G++P
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR-GMRPD 782
Query: 403 VEQYACMVGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLN 443
Y ++ ++ G + + EM + P + L++
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 13/282 (4%)
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEE 116
+G+E DI N ++ + G+ K++D M + +S N ++G + G EE
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
+ +M+ + + P+ T + + K + H + GI++ + N +I
Sbjct: 627 AIHILNQMM-LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 177 AMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFRGME----N 228
A K G A + +M + D V++ S++ GY V KA + M +
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 229 PGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEV 288
P + T+N +I G+ + + EM+ G++P+ T + I + N++G +
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 289 HAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR 330
+ I +I +A +G + AR++ + R
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 48/233 (20%)
Query: 53 EAHCFVLRRGLETDIFVENALVTCYCRCGEIGLARKVFDGMPER----DTVSWNSMIGGY 108
+ H +L G++ V N L+ C+ G A V M R DTV++NS++ GY
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 109 SQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVD 168
VGS V ++ SVM E+GI +
Sbjct: 724 F-----------------VGSHVRKALSTYSVMM-------------------EAGISPN 747
Query: 169 LPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFVVKARDVFR 224
+ N +I + G + + EM + DD +Y ++ISG G + + ++
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYC 807
Query: 225 GMENPGL----DTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTI 273
M GL T+N LIS A +L++EM G+ PN T + I
Sbjct: 808 EMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 860
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 193/445 (43%), Gaps = 52/445 (11%)
Query: 1 MLIAYSFNGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLR 60
+++AY+ N + + F S G + + ++ A+ + S V+ + ++R
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRS--ADVEYVYKEMIR 216
Query: 61 RGLETDIFVENALVTCYCRCGEIGLARKVFDGMP----ERDTVSWNSMIGGYSQCGFYEE 116
R ++ ++F N ++ C+ G++ AR V + M + VS+N++I GY + G +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
M +V+ + V E+ + +L N +I
Sbjct: 277 -------MYKADAVLKEMV--------------------------ENDVSPNLTTFNILI 303
Query: 177 AMYAKCGSLDYARELFEEMSEKDD----VSYGSIISGYMAYGFVVKA---RD--VFRGME 227
+ K +L + ++F+EM ++D +SY S+I+G G + +A RD V G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 228 NPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKE 287
P L T+NALI+G +N+ + A+D+ ++G G P I + + G
Sbjct: 364 -PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSR---SLVIWTAIITAYAA 344
+ R ++ +I + G I A+++FDQ S+ LV + ++ Y
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCR 482
Query: 345 HGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVE 404
G++ A L +M G++P +T V+ G + A + M + ++ V
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 405 QYACMVGVLSRAGKLSEAAKFISEM 429
Y ++ S+ GKL +A ++EM
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 130/306 (42%), Gaps = 15/306 (4%)
Query: 220 RDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYF 279
+++ R P + T+N +I+ + + A D++ +M+ G PN V+ + I +
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 280 SNLRGGKEVHAYAIRR-----CYDQNIYVATAIIDTYAKLGFIHGARQVF----DQARSR 330
GK A A+ + N+ +ID + K + G+ +VF DQ
Sbjct: 272 GG--NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 331 SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIF 390
+++ + ++I G S A+ + +M+ +G+QP+ +T A++ + ++ EA +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 391 NTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEMPIE---PSAKAWGALLNGASV 447
++ + G P Y ++ + GK+ + EM E P + L+ G
Sbjct: 390 GSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 448 YGDVETGKFACDHLFEIEPESSGNYIIMANLYSCAGRWEEASRVRKRMEEIGVHKIRGSS 507
G++E K D L + I+ Y G +A+ + K M ++G+ +
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 508 WIEMSG 513
I M G
Sbjct: 509 NIVMKG 514
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 167/424 (39%), Gaps = 81/424 (19%)
Query: 17 LFASSVDAGISPDSFTVTSVLKAIA--------------------SPSFSYYKPVKEAHC 56
++ + I P+ FT V+ A+ SP+ Y + + +C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 57 ------------FVLRRGLETDIFVE----NALVTCYCRCGEIGLARKVFDGMPERDT-- 98
VL+ +E D+ N L+ + + + + KVF M ++D
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 99 --VSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEV 156
+S+NS+I G G E + +M+S G V P+ +T +++ ++ L +++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAG-VQPNLITYNALINGFCKNDMLKEALDM 388
Query: 157 HGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMA 212
G V G + N +I Y K G +D L EEM + D +Y +I+G
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 213 YGFVVKARDVFRGMENPGLD---TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTL 269
G + A+ +F + + GL T++ L+ G + A L++EM GLKP +T
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 270 ASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARS 329
I + Y C + N+ AT + Q+ + R
Sbjct: 509 --NIVMKGY-----------------CKEGNLKAATNM------------RTQMEKERRL 537
Query: 330 R-SLVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLV-DEAW 387
R ++ + ++ Y+ G A L +ML+ G+ P+++T V G V D
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 388 KIFN 391
+FN
Sbjct: 598 HLFN 601
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 288 VHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQAR----SRSLVIWTAIITAY- 342
V+ IRR N++ +I+ K G ++ AR V + + S ++V + +I Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 343 --AAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQ 400
+G A + +M+++ + P+ T ++ + + K+F M + ++
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVK 328
Query: 401 PLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYGDVETGKFA 457
P V Y ++ L GK+SEA +M ++P+ + AL+NG + + K A
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING---FCKNDMLKEA 385
Query: 458 CDHLFEIEPE----SSGNYIIMANLYSCAGRWEEASRVRKRMEEIGV 500
D ++ + ++ Y ++ + Y G+ ++ +++ ME G+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 8 NGLYRHLLDLFASSVDAGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVL-----RRG 62
N + + LD+F S G P + ++ A Y K K F L R G
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA-------YCKLGKIDDGFALKEEMEREG 431
Query: 63 LETDIFVENALVTCYCRCGEIGLARKVFDGMPER---DTVSWNSMIGGYSQCGFYEECKR 119
+ D+ N L+ CR G I A+K+FD + + D V+++ ++ GY + G +
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 120 LYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFV-NESGIEVDLPLCNAVIAM 178
L EM +G + P +T VM+ + +L + + E + +++ N ++
Sbjct: 492 LLKEMSKMG-LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 179 YAKCGSLDYARELFEEMSEK----DDVSYGSIISGYMAYGFV 216
Y++ G L+ A L EM EK + ++Y + + GFV
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 181/469 (38%), Gaps = 92/469 (19%)
Query: 72 ALVTCYCRCGEIGLARKVFDGMPERDTV----SWNSMIGGYSQCGFYEECKRLYMEMLSV 127
+L+ YCR + ++ M +R+ V ++ +++ G G + + EM++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 128 GSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDY 187
G P+ V ++++ Q+ M V + E GI D+ N++I +K +D
Sbjct: 447 GCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 188 ARELFEEMSEK----DDVSYGSIISGYM-------------------------------- 211
AR EM E + +YG+ ISGY+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 212 ---AYGFVVKARDVFRGMENPGL----DTWNALISGMVQNNWFEGAIDLVREMQGSGLKP 264
G V++A +R M + G+ T+ L++G+ +N+ + A ++ REM+G G+ P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 265 NAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVF 324
+ + I FS N++ + + N+ + ++ + + G I A+++
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 325 DQARSRSL----VIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHS 380
D+ + L V + II Y GD + A L+ +M G+ PD T ++ C
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 381 GLVDEAWKIFNTMHS-----------------KYGIQPLVEQ------------------ 405
V+ A IF T K+G L +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 406 --YACMVGVLSRAGKLSEAAKFISEMP---IEPSAKAWGALLNGASVYG 449
Y M+ L + G L A + +M + P+ + +LLNG G
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 193/439 (43%), Gaps = 42/439 (9%)
Query: 22 VDAGISPDSFTVTSVLKAI--ASPSFSYYKPVKEAH-CFVLRRGLETDIFVENALVTCYC 78
V+ G+ P++FT + + AS S K VKE C VL + + L+ YC
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV-----LCTGLINEYC 568
Query: 79 RCGEIGLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDG 134
+ G++ A + M ++ D ++ ++ G + ++ + ++ EM G + PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDV 627
Query: 135 VTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEE 194
+ ++ + ++ + + E G+ ++ + N ++ + + G ++ A+EL +E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 195 MSEK----DDVSYGSIISGYMAYGFVVKARDVFRGMENPGLD----TWNALISGMVQNNW 246
MS K + V+Y +II GY G + +A +F M+ GL + L+ G + N
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 247 FEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRCYD-------- 298
E AI + G+ K A + A L ++ G E+ + R D
Sbjct: 748 VERAITIF----GTNKKGCASSTAPFNALINWVFKF-GKTELKTEVLNRLMDGSFDRFGK 802
Query: 299 QNIYVATAIIDTYAKLGFIHGARQVFDQARSRSL----VIWTAIITAYAAHGDASLALGL 354
N +ID K G + A+++F Q ++ +L + +T+++ Y G + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 355 YAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKY----GIQPLVEQYACMV 410
+ + + +GI+PD + + ++ A G+ +A + + M +K G + + ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 411 GVLSRAGKLSEAAKFISEM 429
++ G++ A K + M
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 175/449 (38%), Gaps = 83/449 (18%)
Query: 58 VLRRGLETDIFVENALVTCYCRCGEIGLARKV-FDGMPERDTVSWNSMIGGYSQCGFYEE 116
++ R + D+ + L+ +CR G + L + V F E T + N + G +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN--VDGALKLKESMI 269
Query: 117 CKRLYMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVI 176
CK L + + V+ DG+ + ++ +K L++ M+ G+ +D + +I
Sbjct: 270 CKGL-VPLKYTYDVLIDGLCKIKRLE---DAKSLLVEMD------SLGVSLDNHTYSLLI 319
Query: 177 AMYAKCGSLDYARELFEEMSEKDDVSYGSIISGYMAYGFVVKARDVFRGMENPGLDTWNA 236
K + D A+ L EM VS+G I YM ++
Sbjct: 320 DGLLKGRNADAAKGLVHEM-----VSHGINIKPYM----------------------YDC 352
Query: 237 LISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGKEVHAYAIRRC 296
I M + E A L M SGL P A AS I + N+R G E+ +R
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR- 411
Query: 297 YDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHGDASLALGLYA 356
NI +I Y + ++ + GD A +
Sbjct: 412 ---NI-----VISPYT----------------------YGTVVKGMCSSGDLDGAYNIVK 441
Query: 357 QMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRA 416
+M+ SG +P+ V T ++ + +A ++ M + GI P + Y ++ LS+A
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKA 500
Query: 417 GKLSEAAKFISEMP---IEPSAKAWGALLNGASVYGDVETGKFACDHLFEIEPESSGNYI 473
++ EA F+ EM ++P+A +GA ++G +E +FA + E G
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGY-----IEASEFASADKYVKEMRECG--- 552
Query: 474 IMANLYSCAGRWEEASRVRKRMEEIGVHK 502
++ N C G E + K +E ++
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYR 581
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 179/405 (44%), Gaps = 20/405 (4%)
Query: 62 GLETDIFVENALVTCYCRCGEIGLARKVFDGMP-ERDTVSWNSMIGGYSQCGFYEECKRL 120
G D+ N +++ YC+ GEI A V D M D V++N+++ G ++ +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 121 YMEMLSVGSVVPDGVTIVSVMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYA 180
ML PD +T +++A + + M++ + + G D+ N ++
Sbjct: 227 LDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 181 KCGSLDYARELFEEMS----EKDDVSYGSIISGYMAYGFVVKAR----DVFRGMENPGLD 232
K G LD A + +M + + +++ I+ + G + A D+ R +P +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 233 TWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNL-RGGKEVHAY 291
T+N LI+ + + AID++ +M G +PN+++ + F + R + +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 292 AIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRS----LVIWTAIITAYAAHGD 347
R CY +I ++ K G + A ++ +Q S+ L+ + +I A G
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 348 ASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQYA 407
A+ L +M ++PD +T ++++ + G VDEA K F+ + GI+P +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGIRPNAVTFN 523
Query: 408 CMVGVLSRAGKLSEAAKFISEM---PIEPSAKAWGALLNGASVYG 449
++ L ++ + A F+ M +P+ ++ L+ G + G
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 24 AGISPDSFTVTSVLKAIASPSFSYYKPVKEAHCFVLRRGLETDIFVENALVTCYCRCGEI 83
+G P+ T +L+++ S + ++ +LR+G + N L+ CR G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTG--RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 84 GLARKVFDGMPER----DTVSWNSMIGGYSQCGFYEECKRLYMEMLSVGSVVPDGVTIVS 139
G A + + MP+ +++S+N ++ G+ + + M+S G PD VT +
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNT 419
Query: 140 VMQACGQSKDLVLGMEVHGFVNESGIEVDLPLCNAVIAMYAKCGSLDYARELFEEMSEK- 198
++ A + + +E+ ++ G L N VI AK G A +L +EM K
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 199 ---DDVSYGSIISGYMAYGFVVKARDVFRGME----NPGLDTWNALISGMVQNNWFEGAI 251
D ++Y S++ G G V +A F E P T+N+++ G+ ++ + AI
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 252 DLVREMQGSGLKPNAVTLASTIPLFSY 278
D + M G KPN + I +Y
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAY 566
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 16/245 (6%)
Query: 208 SGYMAYGFVVKARDVFRGMENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAV 267
+G + GF V+ G P + LI G + A ++ ++GSG P+ +
Sbjct: 115 TGELEEGFKFLENMVYHG-NVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 268 TLASTIPLFSYFSNLRGGKEVHAYAI--RRCYDQNIYVATAIIDTYAKLGFIHGARQVFD 325
T I + + G+ +A ++ R ++ I+ + G + A +V D
Sbjct: 174 TYNVMISGYC-----KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 326 QARSRS----LVIWTAIITAYAAHGDASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSG 381
+ R ++ +T +I A A+ L +M D G PD VT ++ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 382 LVDEAWKIFNTMHSKYGIQPLVEQYACMVGVLSRAGKLSEAAKFISEM---PIEPSAKAW 438
+DEA K N M S G QP V + ++ + G+ +A K +++M PS +
Sbjct: 289 RLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 439 GALLN 443
L+N
Sbjct: 348 NILIN 352
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 227 ENPGLDTWNALISGMVQNNWFEGAIDLVREMQGSGLKPNAVTLASTIPLFSYFSNLRGGK 286
+N ++T+++L +Q NW E A++++ ++ G + + L L L +
Sbjct: 84 QNVTIETFDSLC---IQGNWRE-AVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAAR 139
Query: 287 EVHAYAIRRCYDQNIYVATAIIDTYAKLGFIHGARQVFDQARSRSLVIWTAIITAYAAHG 346
VH I ++ AII+ Y+ + A +VF++ + ++ + +G
Sbjct: 140 VVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNG 199
Query: 347 DASLALGLYAQMLDSGIQPDQVTLTAVLTACAHSGLVDEAWKIFNTMHSKYGIQPLVEQY 406
A+ L+ + + G +P+ V + C +G V E F M+ +YGI P +E Y
Sbjct: 200 YGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHY 259
Query: 407 ACMVGVLSRAGKLSEAAKFISEMPIEPSAKAWGALLNGASVYGDVETGKFACDHLFE 463
+ +L+ +G L EA F+ MP+EPS W L+N + V+GDVE G C L E
Sbjct: 260 HSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD-RCAELVE 315