Miyakogusa Predicted Gene

Lj5g3v0615430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615430.1 tr|G7L198|G7L198_MEDTR Solute carrier family 35
member F5 OS=Medicago truncatula GN=MTR_7g058520 PE=,80.97,0,SUBFAMILY
NOT NAMED,NULL; SOLUTE CARRIER FAMILY 35, MEMBER F5,NULL;
DUF914,Protein of unknown functi,CUFF.53440.1
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07080.1 | Symbols:  | EamA-like transporter family | chr3:22...   247   6e-66
AT4G32140.1 | Symbols:  | EamA-like transporter family | chr4:15...    79   4e-15

>AT3G07080.1 | Symbols:  | EamA-like transporter family |
           chr3:2241360-2242934 FORWARD LENGTH=438
          Length = 438

 Score =  247 bits (631), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/201 (68%), Positives = 162/201 (80%), Gaps = 1/201 (0%)

Query: 35  GERFTWLKLFSVLLCMGGTIIVSLGDSQSGLRTIASNPRLGDIFALLSAGLYAAYITLIR 94
           GE+FTWLKLFSVLLCM GTIIVS+GDS+S    +A NP LGDI +L+SA LYA YITLIR
Sbjct: 213 GEKFTWLKLFSVLLCMSGTIIVSMGDSESKSNAVAKNPLLGDILSLVSAALYAVYITLIR 272

Query: 95  KKLSNEDGKSGEASMAQFLGFLGLFNVLIFLPVALILNFSKIEPFFTLTWKQXXXXXXXX 154
           KKL ++D ++G  SMAQFLGFLGLFN  IFLP ALILNF+K E F  LT KQ        
Sbjct: 273 KKLPDDDERNGRVSMAQFLGFLGLFNFFIFLPPALILNFTKRERFNALTLKQFGLVVGKG 332

Query: 155 XXDNVLSDYLWAKAVLLTSSTVASAGLTIQVPLAAIVDTVTGNAPPFMDYLGAIAVMIGF 214
             DNVLSDYLWAKAVLLT++TVA+AGLTIQVPLAAIVD+++GN P F DY+GA AVM+GF
Sbjct: 333 LLDNVLSDYLWAKAVLLTTTTVATAGLTIQVPLAAIVDSLSGNKPSFTDYIGAAAVMVGF 392

Query: 215 AGINIPSDTFSKSRESNSVEL 235
           AGINIPS+ F KS+E+ ++EL
Sbjct: 393 AGINIPSEMFCKSKET-AIEL 412


>AT4G32140.1 | Symbols:  | EamA-like transporter family |
           chr4:15523037-15525195 REVERSE LENGTH=394
          Length = 394

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 13/194 (6%)

Query: 42  KLFSVLLCMGGTIIVSLGDS----QSGLRTIASNPR--LGDIFALLSAGLYAAYITLIRK 95
           K+ +V + M G ++ +LG +    +S L +  +  R  +GD+F LLSA  Y  + T++ K
Sbjct: 201 KVVAVFVSMAGVVMTTLGKTWASDESQLNSSLNGERSLMGDLFGLLSAVSYGLF-TVLLK 259

Query: 96  KLSNEDGKSGEASMAQFLGFLGLFNVLIFLPVALILNFSKIEPFFTL--TWKQXXXXXXX 153
           K + E+G+     + +  G++GLF ++    +   L    IEP FT+  + K        
Sbjct: 260 KFAGEEGEG--VDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSVKVDEVVLAN 317

Query: 154 XXXDNVLSDYLWAKAVLLTSSTVASAGLTIQVPLAAIVD-TVTGNAPPFMDYLGAIAVMI 212
               +VLSDY WA +V+ T+  VA+ G+++ +PLA + D  + G     +  LG+  V  
Sbjct: 318 GFIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSTQVFA 377

Query: 213 GFAGINIPSDTFSK 226
           GF   NI SD FSK
Sbjct: 378 GFVIANI-SDLFSK 390