Miyakogusa Predicted Gene

Lj5g3v0615010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615010.1 tr|B4VZS1|B4VZS1_9CYAN Tetratricopeptide repeat
domain protein OS=Microcoleus chthonoplastes PCC
742,28.43,2e-16,seg,NULL; TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain;
coile,CUFF.53399.1
         (354 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   231   6e-61
AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   222   3e-58
AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   202   2e-52
AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   128   5e-30
AT4G39470.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   119   3e-27
AT3G18420.1 | Symbols:  | Protein prenylyltransferase superfamil...   118   8e-27

>AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:15696365-15697366 REVERSE
           LENGTH=333
          Length = 333

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/269 (45%), Positives = 183/269 (68%), Gaps = 7/269 (2%)

Query: 84  FLEPTYIAIVAAA-FFLLRLQLKPAKATAPLVPQPPPAESATLXXXXXXXXXXXXXXXXX 142
            L+ T ++  AAA  FL+ LQLKP+ A A  V   P  ES  L                 
Sbjct: 63  ILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMES--LKQSNGNVSFEEEERSLE 120

Query: 143 XRLSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYSHNGEH 202
             L+++P D EALRSL+EV++++RK+ EA++ +DR              KA+++S++G+ 
Sbjct: 121 EYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDL 180

Query: 203 ELARNGFEEVLKRDPFDAEAYHGLLKATSELNEPIGDLLKRIEEAMKHCEAEKDKAFEAR 262
           E A+ GFEE+L +DP   EAYHGL+ A S+  + +  + KRIEEAM  C+ EK++  + R
Sbjct: 181 ESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRK-DLR 239

Query: 263 EFKLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADKQFAMY 322
           +FKLL+AQI+VIE  ++ ALK+Y+ELVKEEP+DFRPYLCQG++YT+LKK++EA+KQF  +
Sbjct: 240 DFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKF 299

Query: 323 RKLLPKDHPYKEYFEDN---TQVFSQKLR 348
           R+L+PK+HPY+EYF DN   +++F++K++
Sbjct: 300 RRLVPKNHPYREYFMDNMVASKLFAEKVQ 328


>AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:19859954-19860976 REVERSE
           LENGTH=340
          Length = 340

 Score =  222 bits (566), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 108/205 (52%), Positives = 155/205 (75%), Gaps = 4/205 (1%)

Query: 145 LSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYSHNGEHEL 204
           L  +P+D +ALRSL+EVK+++RK+ EAV+ +DR              KA++++++G+ +L
Sbjct: 123 LITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDL 182

Query: 205 ARNGFEEVLKRDPFDAEAYHGLLKATSELNEPIGDLLKRIEEAMKHCEAEKDKAFEAREF 264
           A+ GFEE+L +DP   EAYHGLL A S+    + ++  RIEEAM  C+ E ++  + R+F
Sbjct: 183 AKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQN-DFRDF 241

Query: 265 KLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADKQFAMYRK 324
           KLL+AQI+VIE  +S ALK+YQELVKEEP+DFRPYLCQG++YTLLKKKD+A++QF  +RK
Sbjct: 242 KLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRK 301

Query: 325 LLPKDHPYKEYFEDN---TQVFSQK 346
           L+PK+HPY+EYF DN   T++FS+K
Sbjct: 302 LVPKNHPYREYFMDNMIATKLFSEK 326


>AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:583117-584097 FORWARD
           LENGTH=326
          Length = 326

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/263 (44%), Positives = 161/263 (61%), Gaps = 9/263 (3%)

Query: 84  FLEPTYIAIVAAAFFL---LRLQLKPAKATAPLVPQPPPAESA---TLXXXXXXXXXXXX 137
           FL+ T + +  AA  L   L L  KP  A A LV  PPP  +A   T             
Sbjct: 56  FLKTTCVTLTTAAALLSASLHLSTKPVTA-ATLVSPPPPPSTAADLTSDQISSRPKEEEE 114

Query: 138 XXXXXXRLSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYS 197
                  L+ NP D EAL+SL+++K + + ID A++ ++R              KA + +
Sbjct: 115 EAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQT 174

Query: 198 HNGEHELARNGFEEVLKRDPFDAEAYHGLLKATSELNEPIGDLLKRIEEAMKHCEAEKDK 257
           + G+ + A  GFEEVL +DPF  EAYHGL+ A SE    + ++  RI EA++ C+ E  K
Sbjct: 175 YGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKCKKENKK 234

Query: 258 AFEAREFKLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADK 317
            F  R+F LLIAQI+VI+ +   AL+VYQELVK+EPKDFRPYLCQG++YTL+KKKDEA+K
Sbjct: 235 DF--RDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEK 292

Query: 318 QFAMYRKLLPKDHPYKEYFEDNT 340
           QFA +R+L+P++HPYKEY + N 
Sbjct: 293 QFAEFRRLVPENHPYKEYLDANV 315


>AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:2915636-2916640 FORWARD
           LENGTH=334
          Length = 334

 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 1/190 (0%)

Query: 145 LSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYSHNGEHEL 204
           L     D  AL  L E+K ++ K ++A+  +DR              KA + S++G+ E 
Sbjct: 106 LETQSNDVNALSLLTEIKFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSES 165

Query: 205 ARNGFEEVLKRDPFDAEAYHGLLKATSELNEPIGDLLKRIEEAMKHCEAEKDKAFEAREF 264
           A   FEE+L++DP   +AYH L+         + ++ KRI + ++ C+ EK K  E   F
Sbjct: 166 AIEAFEEILEKDPIRVDAYHYLVMEYYNSKPKLTEIEKRINKVIRRCKKEK-KTKEILGF 224

Query: 265 KLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADKQFAMYRK 324
           ++LIAQI+ IE     A+++ +ELVKE+P DF  YL QGVVYTL+ K +EA KQF    +
Sbjct: 225 RMLIAQIRFIEGKSVEAIRICEELVKEDPNDFTIYLFQGVVYTLMNKGEEAAKQFEHVAR 284

Query: 325 LLPKDHPYKE 334
           ++P++HP +E
Sbjct: 285 VIPRNHPSRE 294


>AT4G39470.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:18359735-18361165 REVERSE
           LENGTH=341
          Length = 341

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 110/195 (56%), Gaps = 5/195 (2%)

Query: 145 LSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYSHNGEHEL 204
           L N P + EA++++V  K+R  K ++AV+ V++              +A  Y   GE   
Sbjct: 126 LENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSK 185

Query: 205 ARNGFEEVLKRDPFDAEAYHGLLKATSELNE-PIGDLLKRIEEAMKHCEAEKDKAFEARE 263
           A+  ++++LK  P    A HGL     + ++  + D+L    E  +    + ++  E R 
Sbjct: 186 AKRLYKDILKEQPLLIRALHGLAMVMHKTHDTSVFDMLIEAMEVAR----QGNRVTEERN 241

Query: 264 FKLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADKQFAMYR 323
            ++LI Q+ ++E  +   LK++Q++V + P+DFRPYLCQG+VY+L+ KK+EA +QF +Y 
Sbjct: 242 IQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYW 301

Query: 324 KLLPKDHPYKEYFED 338
            L+P + P K + +D
Sbjct: 302 SLVPGEFPQKGFLDD 316


>AT3G18420.1 | Symbols:  | Protein prenylyltransferase superfamily
           protein | chr3:6324771-6325721 REVERSE LENGTH=316
          Length = 316

 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 8/195 (4%)

Query: 145 LSNNPADTEALRSLVEVKVRARKIDEAVQAVDRXXXXXXXXXXXXXXKAHLYSHNGEHEL 204
           L + P   E LRSL++ K+   + +EA++ ++R               A L    G  E 
Sbjct: 111 LDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPEN 170

Query: 205 ARNGFEEVLKRDPFDAEAYHG---LLKATSELNEPIGDLLKRIEEAMKHCEAEKDKAFEA 261
           AR  FEE+L+R+P   EA      L+  + E N     +L+R+E+A+   EAE     EA
Sbjct: 171 ARQMFEEILQRNPLSFEALFENALLMDRSGEGN----AVLQRLEDALAVAEAEY-LVKEA 225

Query: 262 REFKLLIAQIKVIEDDYSGALKVYQELVKEEPKDFRPYLCQGVVYTLLKKKDEADKQFAM 321
           R+ +L+IAQI  ++ +   ALK Y++L KE+PKDFRPY C+G++Y+LL K  EA +QFA 
Sbjct: 226 RDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAK 285

Query: 322 YRKLLPKDHPYKEYF 336
           YR+L PK    + Y 
Sbjct: 286 YRELSPKKFEVEGYL 300