Miyakogusa Predicted Gene

Lj5g3v0614530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614530.1 tr|B1XK02|B1XK02_SYNP2 Arginine biosynthesis
bifunctional protein ArgJ OS=Synechococcus sp. (strain
,42.21,3e-19,Q9ZUR7_ARATH_Q9ZUR7;,Arginine biosynthesis protein ArgJ;
seg,NULL; DmpA/ArgJ-like,Peptidase S58 DmpA,gene.g59322.t1.1
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ fam...   140   5e-34
AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ fam...   140   6e-34

>AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742689 REVERSE LENGTH=468
          Length = 468

 Score =  140 bits (353), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 85/161 (52%), Gaps = 55/161 (34%)

Query: 26  VGGTKVRVGGMAKGSGMIHPNMATMLGV-----------------------------DGD 56
           VGG K+RVGGMAKGSGMIHPNMATMLGV                             DGD
Sbjct: 226 VGGIKIRVGGMAKGSGMIHPNMATMLGVITTDALVESDIWRKMVKVAVNRSFNQITVDGD 285

Query: 57  TSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIE-- 114
           TSTNDTV                   EA QLQACLDAVMQGLAKSIAWDGEGATCLIE  
Sbjct: 286 TSTNDTVIALASGLSGSPSISSLNCKEAAQLQACLDAVMQGLAKSIAWDGEGATCLIEVT 345

Query: 115 ------------------------AAVYGRDPNWGRIAAAA 131
                                   AAVYGRDPNWGRIAAAA
Sbjct: 346 VKGTETEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAA 386


>AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742430 REVERSE LENGTH=409
          Length = 409

 Score =  140 bits (352), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 85/161 (52%), Gaps = 55/161 (34%)

Query: 26  VGGTKVRVGGMAKGSGMIHPNMATMLGV-----------------------------DGD 56
           VGG K+RVGGMAKGSGMIHPNMATMLGV                             DGD
Sbjct: 167 VGGIKIRVGGMAKGSGMIHPNMATMLGVITTDALVESDIWRKMVKVAVNRSFNQITVDGD 226

Query: 57  TSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIE-- 114
           TSTNDTV                   EA QLQACLDAVMQGLAKSIAWDGEGATCLIE  
Sbjct: 227 TSTNDTVIALASGLSGSPSISSLNCKEAAQLQACLDAVMQGLAKSIAWDGEGATCLIEVT 286

Query: 115 ------------------------AAVYGRDPNWGRIAAAA 131
                                   AAVYGRDPNWGRIAAAA
Sbjct: 287 VKGTETEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAA 327