Miyakogusa Predicted Gene

Lj5g3v0614510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614510.1 tr|Q075K5|Q075K5_PROWI Plastid ArgJ (Fragment)
OS=Prototheca wickerhamii PE=2 SV=1,56.98,3e-18,ArgJ,Arginine
biosynthesis protein ArgJ; Q3C251_CITLA_Q3C251;,Arginine biosynthesis
protein ArgJ; Dm,gene.g59320.t1.1
         (131 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ fam...   140   3e-34
AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ fam...   111   1e-25

>AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742689 REVERSE LENGTH=468
          Length = 468

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/129 (58%), Positives = 88/129 (68%), Gaps = 8/129 (6%)

Query: 1   MYSC-----VVVPHPIFLHKTSLNPKIFTSMRIRAMS---NQPSTYIPAAPIFLPEGPWN 52
           M+SC     V    P F    S        +R+ A++    + S  IPAAPI LP+G W 
Sbjct: 1   MHSCSHTHFVSFKLPHFFAPKSFVVSSRRELRVFAVATTVEEASGNIPAAPISLPQGSWK 60

Query: 53  QIPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKK 112
           QI GGVTAA+GFKAAGMY GLRA G+KPDLALVTCDV+AV+AG FTTNVVAAAPV+YCKK
Sbjct: 61  QIAGGVTAAKGFKAAGMYAGLRAAGKKPDLALVTCDVEAVAAGVFTTNVVAAAPVVYCKK 120

Query: 113 TLDISNTVR 121
            L+ S T R
Sbjct: 121 VLETSKTAR 129


>AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742430 REVERSE LENGTH=409
          Length = 409

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 60/69 (86%)

Query: 53  QIPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKK 112
           +  GGVTAA+GFKAAGMY GLRA G+KPDLALVTCDV+AV+AG FTTNVVAAAPV+YCKK
Sbjct: 2   ETAGGVTAAKGFKAAGMYAGLRAAGKKPDLALVTCDVEAVAAGVFTTNVVAAAPVVYCKK 61

Query: 113 TLDISNTVR 121
            L+ S T R
Sbjct: 62  VLETSKTAR 70