Miyakogusa Predicted Gene
- Lj5g3v0614410.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0614410.2 tr|D7LIG7|D7LIG7_ARALL Protein binding protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_481,27.09,1e-18,seg,NULL,CUFF.53365.2
(490 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 362 e-100
AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 336 2e-92
AT5G59830.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 160 2e-39
AT5G59830.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 160 2e-39
AT5G13660.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 149 3e-36
AT5G13660.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 148 1e-35
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 108 9e-24
AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 100 2e-21
>AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15745033-15749615 REVERSE LENGTH=829
Length = 829
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/498 (45%), Positives = 288/498 (57%), Gaps = 70/498 (14%)
Query: 2 MGEEAVCLVQALAADGVKGNNEESRAELKRDFHQCVADTEPEQLS---PNKKQAKEVSND 58
MGE +CL +E +LKRD + DT+ P+KKQAKE SND
Sbjct: 1 MGEGTICLEMP----------KEENGQLKRD--RLDDDTDEGNKGDHFPSKKQAKEASND 48
Query: 59 EVRSEVSNPNISATENALAFQDISSQPTESENAHHAECGELTSTCLENSSSYGS---LSD 115
++ SE+SNP S E+ F+D+SSQP +S EC + S +GS +SD
Sbjct: 49 DITSEISNPVASPVESTSLFRDVSSQPVKS---GLVEC---------SGSDFGSEETVSD 96
Query: 116 EAGVQXXXXXXXXXXXXXXXXXXXXXXGKDTSTSRVVLEIPKHASSTGIRKITFKFSKKK 175
+A V D SR VLEIPKH SSTGI KITFK SK K
Sbjct: 97 DASV---------------VGSSQTEQSSDVLPSRFVLEIPKHLSSTGITKITFKLSKPK 141
Query: 176 EDYCYQPPAKDDNESSCGMGYVRDGDLDLYTRNMELKMSKKVVPDCYPTNVKKLLSTGIL 235
+++ DD + ++D D M KK+V YP+NVKKLL TGIL
Sbjct: 142 KEF-------DD------LPLIKDHTWDAGVVKMP---KKKIVSLSYPSNVKKLLETGIL 185
Query: 236 DGAVVKYIYNPLKVELQGIISGGGYLCGCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIFL 295
+GA VKYI P +L GII GGYLCGC+ CN+S+VLSAYEFEQHAGAKTRHPNNHIFL
Sbjct: 186 EGARVKYISTPPVRQLLGIIHSGGYLCGCTTCNFSKVLSAYEFEQHAGAKTRHPNNHIFL 245
Query: 296 ENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVNEECFQLWKESLLQSNERDQSCKNFSA 355
EN R VY+I+QE+KT+P VL+EVI+NVAG+++NEE + WK S QSN S +N+
Sbjct: 246 ENRRAVYNIVQELKTAPRVVLEEVIRNVAGSALNEEGLRAWKASFQQSNS--MSDRNY-- 301
Query: 356 KSVSNSTPRTSISQSVESSGHWSSLHAPSH-FEQQMYVSQTTDEWKRLVKKPSSN-SGL- 412
+++ + + + ++ S + +H F ++ Y T DE KR+ KK +S+ SG
Sbjct: 302 --ITDHSTVSYLGPGLDESQSLTPCSVENHYFSEKTYAKDTLDEPKRIAKKLTSHVSGTG 359
Query: 413 LLKKSADGCTKRRDNDLHRLLFMPNGLPDGAELAXXXXXXXXXXXXXXXXXIVCSCCDIE 472
KK ++G ++RDNDLHRLLFMPNGLPDG ELA IVCSCC E
Sbjct: 360 CHKKVSEGSNRKRDNDLHRLLFMPNGLPDGTELAYYVKTQKLLQGYKQGSGIVCSCCSRE 419
Query: 473 ISPSQFEAHAGMAARRQP 490
ISPSQFEAHAGMAARRQP
Sbjct: 420 ISPSQFEAHAGMAARRQP 437
>AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr3:19892863-19897412 REVERSE LENGTH=841
Length = 841
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/499 (42%), Positives = 280/499 (56%), Gaps = 55/499 (11%)
Query: 2 MGEEAVCLVQALAADGVKGNNEESRAELKRD---FHQCVADTEPEQLSPNKKQAKEVSND 58
MGE VC + N E++ +LKRD F Q D E E S NK+Q KE SND
Sbjct: 1 MGEATVCFAK---------ENSETKKDLKRDRLCFEQDNLDEE-ELYSSNKRQTKEPSND 50
Query: 59 EVRSEVSNPNIS-ATENALAFQDISSQPTESENAHHAECGELTSTCLENSSSYGSLSDEA 117
+++SE+SNP S +NA +F+DI+S P +S + G+ +C S SY +++DE
Sbjct: 51 DMKSEISNPVPSPVVDNASSFRDITSNPAKSSS------GDRVGSC---SGSYETITDE- 100
Query: 118 GVQXXXXXXXXXXXXXXXXXXXXXXGKDTSTSRVVLEIPKHASSTGIRKITFKFSKKKED 177
D S EIPKH S+TGI KITFK SK+ ED
Sbjct: 101 ---------------KHSEYCSSLANSDAVPSSFEREIPKHLSTTGITKITFKLSKRNED 145
Query: 178 YCYQPPAKDDNESSCGMGYVRDGDLDLYTRNMELKMSKKVVPDCYPTNVKKLLSTGILDG 237
+C P ++ GY + + + + +KM KK+ + +NVKKLL TGILDG
Sbjct: 146 FCDLPMIQEHTWE----GYPSN----VASSTLGVKMLKKIDSTNFLSNVKKLLGTGILDG 197
Query: 238 AVVKYIYNPLKVELQGIISGGGYLCGCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIFLEN 297
A VKY+ ELQGII GGYLCGC+ C++S+VL AYEFE+HAG KT+HPNNHI+LEN
Sbjct: 198 ARVKYLSTSAARELQGIIHSGGYLCGCTACDFSKVLGAYEFERHAGGKTKHPNNHIYLEN 257
Query: 298 GRPVYSIIQEIKTSPLSVLDEVIKNVAGASVNEECFQLWKESLLQSNERDQSCKN----F 353
GRPVY++IQE++ +P VL+EVI+ VAG++++EE FQ WK S Q + N
Sbjct: 258 GRPVYNVIQELRIAPPDVLEEVIRKVAGSALSEEGFQAWKGSFQQDKNMTEDDSNHIMDH 317
Query: 354 SAKSVSNSTPRTSISQSVESSGHWSSLHAPSHFEQQMYVSQTTDEWKRLVKKPSSNS-GL 412
S +S+ S P + S ES ++F +++ T K KK +S+ G+
Sbjct: 318 SFQSLV-SYPGSGWSLD-ESQSSTPCFPEDNYFREKICTKDTRHAHKPKAKKLTSHMFGM 375
Query: 413 LLKKSADGCTK-RRDNDLHRLLFMPNGLPDGAELAXXXXXXXXXXXXXXXXXIVCSCCDI 471
K G K +RDNDLHRLLF+PNGLPDG ELA IVCSCCD
Sbjct: 376 GCHKKVSGGGKWKRDNDLHRLLFLPNGLPDGTELAYYVKSQKLLQGYKQGSGIVCSCCDT 435
Query: 472 EISPSQFEAHAGMAARRQP 490
+ISPSQFEAHAGMA RRQP
Sbjct: 436 KISPSQFEAHAGMAGRRQP 454
>AT5G59830.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13660.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr5:24105423-24107071 FORWARD LENGTH=425
Length = 425
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 210 ELKMSKKVVPDCYPTNVKKLLSTGILDGAVVKYIYNPLKVELQGIISGGGYLCGCSMCNY 269
E K SKK +P+NV+ L+STG+LDG VKY+ + + EL+G+I G GYLCGC C++
Sbjct: 278 EAKSSKKEASTSFPSNVRSLISTGMLDGVPVKYV-SVSREELRGVIKGSGYLCGCQTCDF 336
Query: 270 SRVLSAYEFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVN 329
++VL+AY FE+HAG KT+HPNNHI+ ENG+ +Y I+QE++ +P S+L +VI+ V G+ +N
Sbjct: 337 TKVLNAYAFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPIN 396
Query: 330 EECFQLWKESL 340
++ F++WKES
Sbjct: 397 QKAFRIWKESF 407
>AT5G59830.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13660.2); Has 174 Blast hits to 139 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink). | chr5:24105423-24107071 FORWARD
LENGTH=425
Length = 425
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 210 ELKMSKKVVPDCYPTNVKKLLSTGILDGAVVKYIYNPLKVELQGIISGGGYLCGCSMCNY 269
E K SKK +P+NV+ L+STG+LDG VKY+ + + EL+G+I G GYLCGC C++
Sbjct: 278 EAKSSKKEASTSFPSNVRSLISTGMLDGVPVKYV-SVSREELRGVIKGSGYLCGCQTCDF 336
Query: 270 SRVLSAYEFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVN 329
++VL+AY FE+HAG KT+HPNNHI+ ENG+ +Y I+QE++ +P S+L +VI+ V G+ +N
Sbjct: 337 TKVLNAYAFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPIN 396
Query: 330 EECFQLWKESL 340
++ F++WKES
Sbjct: 397 QKAFRIWKESF 407
>AT5G13660.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G59830.2); Has 135 Blast hits to 126 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:4405094-4406983 FORWARD
LENGTH=536
Length = 536
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 89/130 (68%)
Query: 210 ELKMSKKVVPDCYPTNVKKLLSTGILDGAVVKYIYNPLKVELQGIISGGGYLCGCSMCNY 269
+ K +KK + +P+NVK LLSTGI DG VKY + L+G+I G GYLCGC C
Sbjct: 386 DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSRERNLKGMIKGTGYLCGCGNCKL 445
Query: 270 SRVLSAYEFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVN 329
++VL+AYEFEQHA KT+HPNNHI+ ENG+ +Y ++QE+K +P L + I+NV G+ +N
Sbjct: 446 NKVLNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAIQNVTGSDIN 505
Query: 330 EECFQLWKES 339
+ F WK S
Sbjct: 506 HKNFNTWKAS 515
>AT5G13660.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G59830.2);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr5:4405094-4406983
FORWARD LENGTH=537
Length = 537
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 210 ELKMSKKVVPDCYPTNVKKLLSTGILDGAVVKYI-YNPLKVELQGIISGGGYLCGCSMCN 268
+ K +KK + +P+NVK LLSTGI DG VKY ++ + L+G+I G GYLCGC C
Sbjct: 386 DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGYLCGCGNCK 445
Query: 269 YSRVLSAYEFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASV 328
++VL+AYEFEQHA KT+HPNNHI+ ENG+ +Y ++QE+K +P L + I+NV G+ +
Sbjct: 446 LNKVLNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAIQNVTGSDI 505
Query: 329 NEECFQLWKES 339
N + F WK S
Sbjct: 506 NHKNFNTWKAS 516
>AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:11913950-11919741 REVERSE LENGTH=1072
Length = 1072
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 222 YPTNVKKLLSTGILDGAVVKYIYNPLKVE-----LQGIISGGGYLCGCSMCNYSRVLSAY 276
+P +K + GIL+G +V Y+ E L+G+I G G LC CS C +V+S
Sbjct: 377 FPAKLKDIFDCGILEGLIVYYVRGAKVREAGTRGLKGVIKGSGVLCFCSACIGIQVVSPA 436
Query: 277 EFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVNEECFQLW 336
FE HA + + P +I LE+G + ++ K +PL+ L+E ++ V G + + L
Sbjct: 437 MFELHASSNNKRPPEYILLESGFTLRDVMNACKENPLATLEEKLRVVVGPILKKSSLCLS 496
Query: 337 KE----------------SLLQSNERDQSCKNFSAKSVSNSTPRTSISQSVESSGHWSSL 380
+ S L+S E + A N + R S+ S L
Sbjct: 497 CQGPMIEPCDTKSLVVCKSCLESKEPEFHNSPSKANDALNGSSRPSVDPK-------SIL 549
Query: 381 HAPSHFEQQMYVSQTTDEWKRLVKKPSSNSGLLLKKSAD--------GCTKRRDNDLHRL 432
+Q S ++ R +P G +L +S + G R+D LH+L
Sbjct: 550 RRSKSSPRQ---SNRREQPTRKSTEPGVVPGTILSESKNSSIKSNSHGKLTRKDLRLHKL 606
Query: 433 LFMPNGLPDGAELAXXXXXXXXXXXXXXXXXIVCSCCDIEISPSQFEAHAGMAARRQP 490
+F + LPDG E+ I CSCC+ +SPS FEAHAG A+RR+P
Sbjct: 607 VFEDDILPDGTEVGYFVAGEKMLVGYKKGFGIHCSCCNKVVSPSTFEAHAGCASRRKP 664
>AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15393447-15399189 FORWARD LENGTH=1007
Length = 1007
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 139/332 (41%), Gaps = 56/332 (16%)
Query: 215 KKVVPDCYPTNVKKLLSTGILDGAVVKYI--YNPLKVELQGIISGGGYLCGCSMCNYSRV 272
K ++ P V+ L TG+LDG V Y+ L+GII GG LC CS C+++ V
Sbjct: 253 KSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCDWANV 312
Query: 273 LSAYEFEQHAGAKTRHPNNHIFLENGRPVYSIIQEIKTSPLSVLDEVIKNVAGASVNEEC 332
+S +FE HA + R + +I ENG+ + ++ + +PL L+ I + + E+
Sbjct: 313 ISTSKFEIHACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKR 372
Query: 333 F------------QLWKESLL--QSNERDQSCKNFSAKSVSNSTP--------------- 363
F L L +E + S + +A S S P
Sbjct: 373 FTCKRCKGPFPFSSLGHRGFLCKSCSEVETSQASLAATRTSTSAPACITSPVKSRLKITR 432
Query: 364 ----RTSISQSVESS-GHWSSLHAPSHFEQQM----YVSQTTD---------EWKRLVKK 405
TSIS SS G+ + Q + Y+S +T+ ++K+++ +
Sbjct: 433 KPSESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQ 492
Query: 406 PSSNSGLLLKKSADGCTKRRDNDLHR-------LLFMPNGLPDGAELAXXXXXXXXXXXX 458
S L S +K+R L R L+F GLP+G EL
Sbjct: 493 HSVTPKALKSVSLSVSSKKRSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGY 552
Query: 459 XXXXXIVCSCCDIEISPSQFEAHAGMAARRQP 490
I C CC E+SPS FEAHAG A+RR+P
Sbjct: 553 KMGAGIYCYCCKCEVSPSLFEAHAGWASRRKP 584