Miyakogusa Predicted Gene

Lj5g3v0614250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614250.1 Non Chatacterized Hit- tr|B9SU07|B9SU07_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.33,2e-18,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related;
seg,,NODE_68822_length_1353_cov_17.804878.path2.1
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07900.1 | Symbols:  | Mitochondrial transcription terminatio...   176   2e-44
AT1G21150.1 | Symbols:  | Mitochondrial transcription terminatio...   154   1e-37
AT1G61980.1 | Symbols:  | Mitochondrial transcription terminatio...   145   3e-35
AT1G61970.2 | Symbols:  | Mitochondrial transcription terminatio...   135   5e-32
AT1G61970.1 | Symbols:  | Mitochondrial transcription terminatio...   135   5e-32
AT1G61990.1 | Symbols:  | Mitochondrial transcription terminatio...   134   1e-31
AT1G62120.1 | Symbols:  | Mitochondrial transcription terminatio...   130   1e-30
AT3G46950.1 | Symbols:  | Mitochondrial transcription terminatio...   122   4e-28
AT1G62085.1 | Symbols:  | Mitochondrial transcription terminatio...   118   7e-27
AT1G62150.1 | Symbols:  | Mitochondrial transcription terminatio...   116   3e-26
AT1G62110.1 | Symbols:  | Mitochondrial transcription terminatio...   110   2e-24
AT1G61960.1 | Symbols:  | Mitochondrial transcription terminatio...   107   1e-23
AT1G62010.1 | Symbols:  | Mitochondrial transcription terminatio...    96   4e-20
AT5G64950.1 | Symbols:  | Mitochondrial transcription terminatio...    95   7e-20
AT1G56380.2 | Symbols:  | Mitochondrial transcription terminatio...    94   1e-19
AT1G56380.1 | Symbols:  | Mitochondrial transcription terminatio...    94   1e-19
AT5G23930.1 | Symbols:  | Mitochondrial transcription terminatio...    94   1e-19
AT1G79220.1 | Symbols:  | Mitochondrial transcription terminatio...    69   5e-12
AT4G14605.1 | Symbols:  | Mitochondrial transcription terminatio...    52   5e-07
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active...    51   1e-06

>AT5G07900.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:2520188-2521405 FORWARD
           LENGTH=405
          Length = 405

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 173/329 (52%), Gaps = 7/329 (2%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL   CG +P SA  AS+++  D+ ++P +V+   + HGF+ +QI S++ + P LL  + 
Sbjct: 74  YLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANA 133

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
              +LPK  F  S G S   +  T+   P  L  SL   +IP+Y  ++    SD K ++ 
Sbjct: 134 ESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAA 193

Query: 163 VIVCPNSIGDARVQH---NVKLLLDVGVSHSNITHLIRTRPSILCSTN--FIDAVEEVKG 217
           +        +   ++   N+  + + GV    I  L+   P  +   N  F    ++ + 
Sbjct: 194 LRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQE 253

Query: 218 LGFDPLKLNFSVALLAKRAI-SKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEK 276
           +GF+P K  F +A+ A     +KS WD      ++WG SED+I  +FK+ P  M+ S+ K
Sbjct: 254 MGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERK 313

Query: 277 LNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKGLMKKGASLVTPF 336
           +N  M ++V+++     ++   P++  FSLE RI+PR SV + L+S GL+K+  SL +  
Sbjct: 314 INRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLL 373

Query: 337 CLTDKLFLQKFVTCFEKGETSRLLKLYQG 365
              +K+FL+K V  +E+ E   L+ LY G
Sbjct: 374 VPVEKVFLEKLVIKYEE-ELPELMNLYLG 401


>AT1G21150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:7406406-7407578 REVERSE
           LENGTH=390
          Length = 390

 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL   CG + +SA   S+ V+  ++KKP+SV+A F+ HGF+  QI S++   P +L+  P
Sbjct: 61  YLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSP 120

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
              + PK  F +S G ST D    ++ SP  L  SL K +IP Y+ ++     +   + C
Sbjct: 121 EDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKC 180

Query: 163 V---IVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN--FIDAVEEVKG 217
           +   I C +      V   V +  ++GV   +I  L++  P    S    F + +  V  
Sbjct: 181 LKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCS 240

Query: 218 LGFDPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKL 277
            GFDP K  F  A++A    S+S  + K    + +G S+++   +  R P+ +  S EK+
Sbjct: 241 YGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKI 300

Query: 278 NAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKGLMKK-GASLVTPF 336
              + + V+ +G  +  ++A P++   S+E RI PR  V+  LLSKGL+KK   +  T  
Sbjct: 301 MYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTIL 360

Query: 337 CLTDKLFLQKFV 348
            L    F+ KFV
Sbjct: 361 KLKSSEFMDKFV 372


>AT1G61980.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22908162-22909418 FORWARD
           LENGTH=418
          Length = 418

 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 175/362 (48%), Gaps = 40/362 (11%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A   S++V F+    P+SV+   + HGF+ SQI +I+   P+LL  D 
Sbjct: 57  YLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRR-FCPSDAKAIS 161
            K + PK QFL S+GAS+ ++   V+  P  L     K I   Y+ ++       +K+  
Sbjct: 117 EKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEK 176

Query: 162 CVIVCPNSIGDARVQHNVKLLLDVGVSHSNI-THLIRTRPSILCSTNFIDAVEEVKGLGF 220
                P    + +++ N+ +L ++G+ H  +   LI     +     F +++++V  +GF
Sbjct: 177 SCQPFPQGNLENKIR-NLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGF 235

Query: 221 DPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEK-LNA 279
           DP    F  AL   + +S    +DK+NA K+ G   + ++  FKR P+F+  S++K LN 
Sbjct: 236 DPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNT 295

Query: 280 VMS----------------------------------FWVSQLGWDSSTLLASPIIFGFS 305
           + +                                  F V ++ W    L+++P + G+S
Sbjct: 296 IETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYS 355

Query: 306 LETRIVPRASVVQYLLSKGLM-KKGASLVTPFCLTDKLFLQKFVTCFEKGE-TSRLLKLY 363
           LE R VPR +VVQ L+SKGL+  +  S+   F  TD++FL ++V   E  +  + L+ +Y
Sbjct: 356 LEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQLETELMAIY 415

Query: 364 QG 365
           + 
Sbjct: 416 RA 417


>AT1G61970.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 40/362 (11%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G T + A   S++V F+    P+SV+     HGF+ SQI +I+   P+LL  D 
Sbjct: 57  YLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVR-RFCPSDAKAIS 161
            K + PK QFL S+GAS+ +I   V+  P  L     K I   Y+ ++       +K   
Sbjct: 117 EKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEK 176

Query: 162 CVIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGLGF 220
                P    + +++ NV +L ++G+ H  +  L+ +    +C    F + +++V  +GF
Sbjct: 177 LCHSLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEETLKKVVEMGF 235

Query: 221 DPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQP-SFMLRSKEKLNA 279
           DP    F  AL     +++   ++K++  K  G    +++ SFK+ P S  +  K+ L++
Sbjct: 236 DPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDS 295

Query: 280 VMSFW----------------------------------VSQLGWDSSTLLASPIIFGFS 305
           + +F                                   V ++ W    ++++P +FG+S
Sbjct: 296 IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYS 355

Query: 306 LETRIVPRASVVQYLLSKGLMKKG-ASLVTPFCLTDKLFLQKFVTC-FEKGETSRLLKLY 363
           LE RIVPR +V++ L+SKGLM+    S+      T ++FL ++V    +K   + L+ +Y
Sbjct: 356 LEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

Query: 364 QG 365
           + 
Sbjct: 416 RA 417


>AT1G61970.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 40/362 (11%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G T + A   S++V F+    P+SV+     HGF+ SQI +I+   P+LL  D 
Sbjct: 57  YLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVR-RFCPSDAKAIS 161
            K + PK QFL S+GAS+ +I   V+  P  L     K I   Y+ ++       +K   
Sbjct: 117 EKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEK 176

Query: 162 CVIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGLGF 220
                P    + +++ NV +L ++G+ H  +  L+ +    +C    F + +++V  +GF
Sbjct: 177 LCHSLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEETLKKVVEMGF 235

Query: 221 DPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQP-SFMLRSKEKLNA 279
           DP    F  AL     +++   ++K++  K  G    +++ SFK+ P S  +  K+ L++
Sbjct: 236 DPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDS 295

Query: 280 VMSFW----------------------------------VSQLGWDSSTLLASPIIFGFS 305
           + +F                                   V ++ W    ++++P +FG+S
Sbjct: 296 IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYS 355

Query: 306 LETRIVPRASVVQYLLSKGLMKKG-ASLVTPFCLTDKLFLQKFVTC-FEKGETSRLLKLY 363
           LE RIVPR +V++ L+SKGLM+    S+      T ++FL ++V    +K   + L+ +Y
Sbjct: 356 LEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

Query: 364 QG 365
           + 
Sbjct: 416 RA 417


>AT1G61990.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22911453-22912697 FORWARD
           LENGTH=414
          Length = 414

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 170/345 (49%), Gaps = 46/345 (13%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G + + A   S++V F+    P+SV++ F+ +GF+ SQI +I+   P LL  D 
Sbjct: 57  YLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K +  K Q L S+GAS+ +I   V+  P  L    +K I   Y+ V+    +D    S 
Sbjct: 117 KKALGRKLQILQSRGASSSEITEIVSTVPRILG---KKSITVYYDAVKDIIVADT---SS 170

Query: 163 VIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCS-TNFIDAVEEVKGLGFD 221
               P      +++ NV  L ++G+    +  L+ ++   +C   NF  ++++V  +GFD
Sbjct: 171 SYELPQGSQGNKIR-NVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFD 229

Query: 222 PLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKL---- 277
           P    F +AL     +S+   ++K+   +  G + D++++ FK+ PS +  SK+K+    
Sbjct: 230 PTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSA 289

Query: 278 -------------------------NAVMS------FWVSQLGWDSSTLLASPIIFGFSL 306
                                     +V S      F V ++ W  + L+  P +FG+S+
Sbjct: 290 ETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSM 349

Query: 307 ETRIVPRASVVQYLLSKGLMKKGASL---VTPFCLTDKLFLQKFV 348
           E RI+PR ++++ LLSKGL++KG+ L    +    TD+ FL ++V
Sbjct: 350 EKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394


>AT1G62120.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22960326-22961639 REVERSE
           LENGTH=437
          Length = 437

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 40/324 (12%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A   S +V FD    P+SV++  + HGF+ SQI +I+   P LL  D 
Sbjct: 61  YLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDA 120

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K + PK QFL S GAS+ ++  TV+  P  L     K +   Y+ V+    +D K+   
Sbjct: 121 EKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEAD-KSSKL 179

Query: 163 VIVC---PNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGL 218
             +C   P          N+ +L ++GV    +  L+ +    +C    F +++++   +
Sbjct: 180 EKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCGKEKFKESLKKAVEI 239

Query: 219 GFDPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKL- 277
           GFDP    F  AL     +S    ++K NA K+ GL+ D+++  FK+ P+ + +S++K+ 
Sbjct: 240 GFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIE 299

Query: 278 NAVMSFW----------------------------------VSQLGWDSSTLLASPIIFG 303
           N+V +F                                   V+++ W    + + P + G
Sbjct: 300 NSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLG 359

Query: 304 FSLETRIVPRASVVQYLLSKGLMK 327
           +SLE R VPR +V++ L+SKGL++
Sbjct: 360 YSLEKRTVPRCNVIKVLISKGLLE 383


>AT3G46950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr3:17289452-17290804 FORWARD
           LENGTH=450
          Length = 450

 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 5/236 (2%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL +  G T + A   SK+V F+    P+SV+   + +GF  SQI  I+   P LL  D 
Sbjct: 57  YLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K + PK QFL S+GAS+ +++  V+  P  L    E+ +   Y+ V+     D K  S 
Sbjct: 117 EKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIM-QDGK--SL 173

Query: 163 VIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGLGFD 221
            I CP      R++ N+ +L ++GV    +  L+ +R   +C    F +++++V  +GFD
Sbjct: 174 CISCPEGKKGNRIR-NISVLRELGVPQKLLFSLLISRYQPVCGKEKFEESLKKVVDMGFD 232

Query: 222 PLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKL 277
           P K  F  AL     +S+   ++K+N  K+ G SE EI+  FK+ P F+  S++K+
Sbjct: 233 PAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288


>AT1G62085.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22948757-22950142 REVERSE
           LENGTH=461
          Length = 461

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 163/381 (42%), Gaps = 76/381 (19%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A   SK+V F+    P+SV++  + HGF+ SQI SI+   P+LL  D 
Sbjct: 60  YLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQLLVADA 119

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K + PK QFL S+GAS  ++   V+  P  L    +K I   Y+ V+    +D K+   
Sbjct: 120 EKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEAD-KSSKF 178

Query: 163 VIVC---PNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCS-TNFIDAVEEVKGL 218
             +C   P          NV +L ++GV    +  L+ +    +C   NF +++++V  +
Sbjct: 179 EKLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFPLLISDHQPVCGKENFEESLKKVVEM 238

Query: 219 GFDPLKLNFSVALL-----------AKRAISKS--------------------------- 240
           GFDP    F  AL            AK  + KS                           
Sbjct: 239 GFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIV 298

Query: 241 -QW----------DDKINALKKW---------------------GLSEDEIFQSFKRQPS 268
             W          DD ++ LKK+                     G S DE+    KR P 
Sbjct: 299 QTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQ 358

Query: 269 FMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKG-LMK 327
            ++ S E +     F V ++ W    ++++P + G+SLE R +PR +V++ L+SKG L  
Sbjct: 359 CLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGS 418

Query: 328 KGASLVTPFCLTDKLFLQKFV 348
           +   + +    T++ FL ++V
Sbjct: 419 ELPGMSSVLVCTNEEFLCRYV 439


>AT1G62150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22970198-22971589 REVERSE
           LENGTH=463
          Length = 463

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 161/385 (41%), Gaps = 82/385 (21%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A   S +V F+    P++V+   + H F+ SQI SI+   P LL  D 
Sbjct: 63  YLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTLLVADA 122

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
              + PK   + S+GAS+ ++   V++ P  L    +K I   Y++V+    +D K+   
Sbjct: 123 ENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEAD-KSSKF 181

Query: 163 VIVC---PNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGL 218
             +C   P          NV +L D+GV    +  L+ +   + C    F +++ +V G+
Sbjct: 182 EKLCHSLPEGSKQENKIRNVLVLRDLGVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGM 241

Query: 219 GFDPLKLNFSVALLAKRAISKSQWDDKIN------------------------------- 247
           GFDP    F  AL     +S  + ++  N                               
Sbjct: 242 GFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRII 301

Query: 248 ----ALKKWGLSEDEIFQSFKRQPSFMLRSKEK--LNAVMSFW----------------- 284
               ALK+ GL EDE+   FK+ P   LR+ E+  LN++ +F                  
Sbjct: 302 QTFEALKRCGLCEDEVLSVFKKNP-LCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLP 360

Query: 285 -----------------VSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKGLMK 327
                            V ++ W    +   P + G+S+E R VPR +V++ L+SKGL+ 
Sbjct: 361 QCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLL- 419

Query: 328 KGASL---VTPFCLTDKLFLQKFVT 349
            G+ L    +    TD+ FL+++V 
Sbjct: 420 -GSELPPMASVLACTDQTFLKRYVV 443


>AT1G62110.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22958094-22959482 REVERSE
           LENGTH=462
          Length = 462

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 79/384 (20%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A   SK+V F     P+ V++ F+ +GF+ SQI SI+   P LL  D 
Sbjct: 57  YLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPRLLLIDA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K +  K QFL S+GAS+ ++   V+  P  L     K +   Y+ V+    +D K+   
Sbjct: 117 EKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEAD-KSSKY 175

Query: 163 VIVC---PNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILC--------------- 204
             +C   P +        NV +L D+GV    +  L+ +    +C               
Sbjct: 176 ETLCQPLPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPVCGKENFEESLKKVVEM 235

Query: 205 -----STNFIDAVEEV---------------KGLGFD-----------PLKLNFSVALLA 233
                ++ F+ A+  V               KG GF            P  LN S   + 
Sbjct: 236 GFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIG 295

Query: 234 KRAISKSQ----WDDKINALKKW---------------------GLSEDEIFQSFKRQPS 268
           +   +  +     D+ I+ LKK+                     G S DE     KR P 
Sbjct: 296 QTIETLKKCGLLEDEVISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQ 355

Query: 269 FMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKGLMKK 328
            ++ S E +   + F V ++ W    ++++P + G++LE R VPR +V++ L+SK L+  
Sbjct: 356 CLILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGD 415

Query: 329 GASLVTP----FCLTDKLFLQKFV 348
             S + P       TD+LFL+++V
Sbjct: 416 TGSELPPMSSVLVCTDELFLKRYV 439


>AT1G61960.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22902239-22903612 FORWARD
           LENGTH=457
          Length = 457

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 6/239 (2%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G T + A   SK+V F+  + P+SV++    +GF+ SQI SI+   P LL  D 
Sbjct: 57  YLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPRLLALDA 116

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K + PK Q L S+GAS+ ++   V+  P  L     K I   Y+ V+    +D K+ S 
Sbjct: 117 EKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD-KSSSY 175

Query: 163 VIVC---PNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGL 218
             +C   P      +++ N+ +L ++GV+   +  L+ +    +C    F +++++V  +
Sbjct: 176 EKLCHSFPQGNKKNKIR-NISVLRELGVAQRLLFPLLISDGQPVCGKERFEESLKKVVEM 234

Query: 219 GFDPLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKL 277
           GFDP    F  AL     +S    ++K+N  K+ G    +++  FK+ PSF+  S++K+
Sbjct: 235 GFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKI 293



 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 253 GLSEDEIFQSFKRQPSFMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVP 312
           G S DE     KR P  +  + E +     F V  + W    L++ P +FG+SLE R VP
Sbjct: 339 GFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVP 398

Query: 313 RASVVQYLLSKGLMKKGAS---LVTPFCLTDKLFLQKFVTCFEK 353
           R +V++ L+SKGLMK G+    + +    TD+ FL+++V   +K
Sbjct: 399 RCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYVMKHDK 442


>AT1G62010.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22915886-22917133 FORWARD
           LENGTH=415
          Length = 415

 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 38/293 (12%)

Query: 71  ESVIAFFQQHGFSPSQIQSILIRAPELLTCDPIKRVLPKFQFLASKGASTHDIVTTVTRS 130
           +SV+   + +GF+ SQI SI+     +L  +    +  K QFL S+GAS+ ++   V+  
Sbjct: 71  DSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTV 130

Query: 131 PGFLRTSLEKHIIPAYELVRRFCPSDAKAISCVIVCPNSIGDARVQHNVKLLLDVGVSHS 190
           P  L     K +   Y+ ++    +D  +    I   +S+       N+ +L ++GV   
Sbjct: 131 PKILGKREGKSLSRYYDFIKVIIEADKSSKYEKI--SHSLAQGNKIRNILVLRELGVPQK 188

Query: 191 NITHLIRTRPSILCSTNFIDA-VEEVKGLGFDPLKLNFSVALLAKRAISKSQWDDKINAL 249
            +  L+ ++   +C     DA +++V  +GFDP    F  AL     +S    ++KI   
Sbjct: 189 RLLLLLISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIRVY 248

Query: 250 KKWGLSEDEIFQSFKRQPSFMLRSKEKL-NAVMSFW------------------------ 284
           +  G S D+++  FK+ P  +  S++K+ N++ +F                         
Sbjct: 249 RSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGYST 308

Query: 285 ----------VSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKGLMK 327
                     V ++ W    + + P + G+SLE R VPR +V++ L+SKGL++
Sbjct: 309 EAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLE 361


>AT5G64950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:25953887-25955062 FORWARD
           LENGTH=391
          Length = 391

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 154/333 (46%), Gaps = 22/333 (6%)

Query: 49  GFTPQSALKASKRV-RFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDPIKRVL 107
           GF    A+  + R     + ++P SVI   + + FS +QIQ  +   P ++  +  K + 
Sbjct: 49  GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILE 108

Query: 108 PKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISCVIVCP 167
           PK +F    G +   +   V+++   +  SL K +IP  E+++       + +  ++   
Sbjct: 109 PKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRC 168

Query: 168 NSIGDARVQH-----NVKLLLDVGVSHSNITHLIRTRPSILCSTNFIDAVEEVKGLGFDP 222
             +  +R  +     N+  L   G+  S +  L+R +P I     F  + E+++G     
Sbjct: 169 GWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRI-----FNLSEEKLRGYVSRA 223

Query: 223 LKLNFSV-------ALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKE 275
           L L F++       A+++  ++S+  +D K+      G SEDEI    +R P  +  S++
Sbjct: 224 LDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSED 283

Query: 276 KLNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYL----LSKGLMKKGAS 331
           KL     F++ ++G +   L   P +  ++LE R++PR  V+Q L    L     KK  +
Sbjct: 284 KLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKN 343

Query: 332 LVTPFCLTDKLFLQKFVTCFEKGETSRLLKLYQ 364
           +V    +T++ FL+K+V  F       LL  Y+
Sbjct: 344 MVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376


>AT1G56380.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101327-21102701 FORWARD
           LENGTH=399
          Length = 399

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 48/352 (13%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A    K V       P SV+   + + F+ SQI SI+   PELL  D 
Sbjct: 32  YLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELLMEDA 91

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAI-- 160
              + PK +FL S+   +  +   VTR P  LR   EK +I  Y+ V+    + +++   
Sbjct: 92  ENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRSDFY 151

Query: 161 ------------------------------SCVIVCPNSIGDARVQHNVKLLLDVGVSHS 190
                                         + V+VC  ++ +  ++  V +   +G    
Sbjct: 152 KVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLGFDVR 209

Query: 191 NITHLIRTRPSIL--CSTNFIDAVEEVKGLGFDPLKLNFSVALLAKRAISKSQWD--DKI 246
           ++  + +  P+ L         + E +K  G    ++  S+   + + I  S+ D     
Sbjct: 210 DVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEV-ISMFQKSPQCIDFSELDITQNF 268

Query: 247 NALKKWGLSEDEIFQSFKRQPSFMLRSKEK-LNAVMSFWVSQLGWDSSTLLAS------- 298
             LK  GL E+E+   FKR P  +  S++K LNAV +F       D   ++ +       
Sbjct: 269 EFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVSI 328

Query: 299 PIIFGFSLETRIVPRASVVQYLLSKGLMK-KGASLVTPFCLTDKLFLQKFVT 349
           P++  FS+E  IVPR +V++ L SK L+K + +S+ +     D++FL+++V+
Sbjct: 329 PVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVS 380


>AT1G56380.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101374-21102701 FORWARD
           LENGTH=388
          Length = 388

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 48/352 (13%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G   + A    K V       P SV+   + + F+ SQI SI+   PELL  D 
Sbjct: 21  YLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELLMEDA 80

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAI-- 160
              + PK +FL S+   +  +   VTR P  LR   EK +I  Y+ V+    + +++   
Sbjct: 81  ENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRSDFY 140

Query: 161 ------------------------------SCVIVCPNSIGDARVQHNVKLLLDVGVSHS 190
                                         + V+VC  ++ +  ++  V +   +G    
Sbjct: 141 KVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVC--TLSNETLEERVNIYKTLGFDVR 198

Query: 191 NITHLIRTRPSIL--CSTNFIDAVEEVKGLGFDPLKLNFSVALLAKRAISKSQWD--DKI 246
           ++  + +  P+ L         + E +K  G    ++  S+   + + I  S+ D     
Sbjct: 199 DVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEV-ISMFQKSPQCIDFSELDITQNF 257

Query: 247 NALKKWGLSEDEIFQSFKRQPSFMLRSKEK-LNAVMSFWVSQLGWDSSTLLAS------- 298
             LK  GL E+E+   FKR P  +  S++K LNAV +F       D   ++ +       
Sbjct: 258 EFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVSI 317

Query: 299 PIIFGFSLETRIVPRASVVQYLLSKGLMK-KGASLVTPFCLTDKLFLQKFVT 349
           P++  FS+E  IVPR +V++ L SK L+K + +S+ +     D++FL+++V+
Sbjct: 318 PVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYVS 369


>AT5G23930.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:8074625-8075998 REVERSE
           LENGTH=457
          Length = 457

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 8/242 (3%)

Query: 43  YLTQHCGFTPQSALKASKRVRFDTAKKPESVIAFFQQHGFSPSQIQSILIRAPELLTCDP 102
           YL    G T + A   S +  FD    P+SV+   + +GF  SQI SI+   P  L  +P
Sbjct: 60  YLIDSLGLTTKLAESISMKANFDEKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENP 119

Query: 103 IKRVLPKFQFLASKGASTHDIVTTVTRSPGFLRTSLEKHIIPAYELVRRFCPSDAKAISC 162
            K +  K  FL   GAS+ ++   V++ P  L     K I   Y+ V+        + S 
Sbjct: 120 EKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSS 179

Query: 163 VIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTN-FIDAVEEVKGLGFD 221
                          NV +L  +GV    + +L+ +R   +C    F ++V+++  +GFD
Sbjct: 180 S-----KRKQTNRNRNVSVLRKLGVPQRLLLNLLISRAKPVCGKERFEESVKKIVEMGFD 234

Query: 222 PLKLNFSVALLAKRAISKSQWDDKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKLNAVM 281
           P    F  AL     +S    ++K+NA  + GLS +E++  FK+ P F L+  EK N + 
Sbjct: 235 PKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWP-FSLKYSEK-NIIQ 292

Query: 282 SF 283
            F
Sbjct: 293 KF 294



 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 16/206 (7%)

Query: 152 FCPSDAKAISCVIVCPNSIGDARVQHNVKLLLDVGVSHSNITHLIRTRPSIL--CSTNFI 209
           F P   K ++ + V    + D  ++  V   + +G+S + +  + +  P  L     N I
Sbjct: 233 FDPKSPKFVNALYVF-YELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNII 291

Query: 210 DAVEEVKGLGFDPLKLNFSVALLAKR-----AISKSQWDDKINALKKWGLSEDEIFQSFK 264
              E +K +G    +    V L+ K+       S+ +    +    + G ++DE+    K
Sbjct: 292 QKFETLKRVGLTKEE----VCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIK 347

Query: 265 RQPSFMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFGFSLETRIVPRASVVQYLLSKG 324
           R P  +  + + +     F V  +GW    + ++PI+ GFSLE  ++PR +V++ L+S G
Sbjct: 348 RHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNG 407

Query: 325 LMKK----GASLVTPFCLTDKLFLQK 346
           L+ +     + L +P     KLF++K
Sbjct: 408 LIGEMPAISSVLTSPKLKFLKLFVEK 433


>AT1G79220.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:29799227-29800426 FORWARD
           LENGTH=399
          Length = 399

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 141/302 (46%), Gaps = 15/302 (4%)

Query: 72  SVIAFFQQHGFSPSQIQSILIRAPELLTCDPIKRVLPKFQFLASKGASTHDIVTTVTRSP 131
           S +   ++ G    +I  +  R P L   + + ++  K   L   G ++ D+V  +   P
Sbjct: 82  SPLQVLRRWGCDDDEISKLFTRRPALQRAN-VAQLEFKLSLLKPLGITSSDLVKILNCRP 140

Query: 132 GFL--RTSLEKHIIPAYELVRRFCPSDAKAISCVIVCPNSIG----DARVQHNVKLLLDV 185
            F   R  L++ I    E++        + +  VI+   S+     D +++  ++    +
Sbjct: 141 RFFSCRLVLDERINYFMEIL-----GSKEVLRRVIIRNPSLMLYDLDDKIKPAIEYYKGL 195

Query: 186 GVSHSNITHLIRTRPSILCSTNFIDA-VEEVKGLGFDPLKLNFSVALLAKRAISKSQWDD 244
           G S  ++  ++ +RP+++  TNF +   E ++  G       F    +          ++
Sbjct: 196 GFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVSRMETIEE 255

Query: 245 KINALKKWGLSEDEIFQSFKRQPSFMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFGF 304
           K+  L+K+G SE+EI+  + + P  +  S EK+   M+F ++ +   + +++  P +   
Sbjct: 256 KVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLL 315

Query: 305 SLETRIVPRASVVQYLLSKGL--MKKGASLVTPFCLTDKLFLQKFVTCFEKGETSRLLKL 362
           +LE+R+ PRA +V+ +L   L  + K  S+     +++K FL+ +V C  +   + L++ 
Sbjct: 316 NLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDIATELMEF 375

Query: 363 YQ 364
           Y+
Sbjct: 376 YE 377


>AT4G14605.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr4:8378815-8380564 FORWARD
           LENGTH=493
          Length = 493

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 38/173 (21%)

Query: 172 DARVQHNVKLLLDVGVSHSNITHLIRTRPSILCSTNFIDAVEEVKGLGFDPLKLNFSVAL 231
           D +++  V+ LLD+G+  S+I  ++  RP I C  +  D              L  ++A 
Sbjct: 229 DGKIKPVVEFLLDLGIPKSDIPTILCKRPQI-CGISLTD-------------NLKPTMAF 274

Query: 232 LAKRAISKSQW------------------DDKINALKKWGLSEDEIFQSFKRQPSFMLRS 273
           L    I K+QW                     +  L + GL+E++I +   R P+ M  S
Sbjct: 275 LETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYS 334

Query: 274 -KEKLNAVMSFWVSQLGWDSSTLLAS-PIIFGFSLETRIVPRASVVQYLLSKG 324
            ++KL   M ++ S L  D + LL   P  FG S+E+ + P   V ++ L KG
Sbjct: 335 VEDKLRPTMEYFRS-LNVDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEKG 383


>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
           | chr5:21988544-21990183 FORWARD LENGTH=500
          Length = 500

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 13/250 (5%)

Query: 71  ESVIAFFQQHGFSPSQIQSILIRAPELLTCDPIKRVLPKFQFLAS-KGASTHDIVTTVTR 129
           E +I+F +  G        I+ R P +L  D   +++P+  F+ +  G       T + R
Sbjct: 220 ERLISFLEPFGGI-----GIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRR 274

Query: 130 SPGFLRTSLEKHIIPAYELVRRFCP-SDAKAISCVIVCPNSIG---DARVQHNVKLLLDV 185
            P  L  S+E H+    E ++ F   +  +    V V PN I    + +++  ++ L + 
Sbjct: 275 LPAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKEC 333

Query: 186 GVSHSNITHLIRTRPSILC--STNFIDAVEEVKGLGFDPLKLNFSVALLAKRAISKSQWD 243
           G     +   +   P IL     N    +  +  +G+       + A+ A    S     
Sbjct: 334 GFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQ 393

Query: 244 DKINALKKWGLSEDEIFQSFKRQPSFMLRSKEKLNAVMSFWVSQLGWDSSTLLASPIIFG 303
             I     +GLS ++I     + P  +  +   L   + + +  +G +   LLA P   G
Sbjct: 394 RVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLG 453

Query: 304 FSLETRIVPR 313
           + L++RI  R
Sbjct: 454 YKLDSRIKHR 463