Miyakogusa Predicted Gene

Lj5g3v0554370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0554370.1 Non Chatacterized Hit- tr|I1M9E9|I1M9E9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75,0.000000000001,CheY-like,CheY-like superfamily; no
description,NULL; RESPONSE_REGULATORY,Signal transduction
respon,CUFF.53385.1
         (53 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 | chr...    66   4e-12
AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 | chr...    65   9e-12
AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 | chr4:9...    58   1e-09
AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5...    57   2e-09
AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5...    57   2e-09
AT1G67710.1 | Symbols: ARR11 | response regulator 11 | chr1:2537...    55   1e-08
AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 | chr...    48   1e-06

>AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 |
          chr2:10724490-10726961 REVERSE LENGTH=596
          Length = 596

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/44 (68%), Positives = 35/44 (79%)

Query: 10 DQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITALQ 53
          DQFP+GMRVLAVDDD T L ILE++LR CQY VT T+ A  AL+
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALE 54


>AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 |
          chr4:15444290-15446766 REVERSE LENGTH=552
          Length = 552

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 36/44 (81%)

Query: 10 DQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITALQ 53
          DQFP+GMRVLAVDDD T L IL+ +L++CQY VT T+ A TAL+
Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALE 54


>AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 |
          chr4:9112979-9115785 FORWARD LENGTH=664
          Length = 664

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 3  AVGDDHRDQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITAL 52
          A G  + D FP  +RVL VDDDPT LMILE ML  C Y+VT  + A +AL
Sbjct: 15 AAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESAL 64


>AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 |
          chr3:5756113-5758853 FORWARD LENGTH=669
          Length = 669

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/48 (58%), Positives = 33/48 (68%)

Query: 5  GDDHRDQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITAL 52
          G+   + FP G+RVL VDDDPT LMILE MLR C Y+VT  + A  AL
Sbjct: 26 GETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMAL 73


>AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 |
          chr3:5756113-5759139 FORWARD LENGTH=690
          Length = 690

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/48 (58%), Positives = 33/48 (68%)

Query: 5  GDDHRDQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITAL 52
          G+   + FP G+RVL VDDDPT LMILE MLR C Y+VT  + A  AL
Sbjct: 26 GETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMAL 73


>AT1G67710.1 | Symbols: ARR11 | response regulator 11 |
          chr1:25376994-25378905 REVERSE LENGTH=521
          Length = 521

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/41 (60%), Positives = 31/41 (75%)

Query: 13 PIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITALQ 53
          P+G+RVL VDDDPT+L ILE ML+KC Y+VT    A  AL+
Sbjct: 8  PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALR 48


>AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 |
          chr2:333041-334514 FORWARD LENGTH=382
          Length = 382

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 28/43 (65%)

Query: 10 DQFPIGMRVLAVDDDPTFLMILEAMLRKCQYKVTGTDNAITAL 52
          DQFP G+R+L VDDD + L ILE ML +  Y+VT    A  AL
Sbjct: 5  DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVAL 47