Miyakogusa Predicted Gene

Lj5g3v0553270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0553270.1 Non Chatacterized Hit- tr|I1M9P5|I1M9P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24090
PE,82.31,0,Endonuclease_5,Endonuclease V; seg,NULL,CUFF.53289.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31150.1 | Symbols:  | endonuclease V family protein | chr4:1...   313   7e-86
AT4G31150.2 | Symbols:  | endonuclease V family protein | chr4:1...   309   1e-84

>AT4G31150.1 | Symbols:  | endonuclease V family protein |
           chr4:15143907-15145583 REVERSE LENGTH=277
          Length = 277

 Score =  313 bits (802), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 186/245 (75%), Gaps = 8/245 (3%)

Query: 17  NWITAQDTLREKLITEDSFPWKAPSTG--------LRYVGGVDISFSKDDPSRACGTLVV 68
            W   QD L++KLI  D F WK  S+         L+YVGGVD+SF K+D S AC  LVV
Sbjct: 19  KWTEEQDELKKKLIAYDDFTWKLSSSTELSQGSEILKYVGGVDMSFCKEDSSVACACLVV 78

Query: 69  LDFHTLQVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNG 128
           L+  +L+VV+ DFSL+ L VPYVPGFLAFREAPVLL IL+KM+   +PFYPQ++MVDGNG
Sbjct: 79  LELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHPFYPQVLMVDGNG 138

Query: 129 ILHPRGFGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCS 188
           ILHPRGFGLACH+GV+A+LPTIG+GKNLHHVDGL+QS V++ L  + N  +  ITLVG S
Sbjct: 139 ILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLNQSEVKQSLQLQINEHEQTITLVGNS 198

Query: 189 GHIWGAAMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQADIRSRDYIRK 248
           G  WG   R T  S+KPI++S+GHRISL +A+ +V++TCKYRVPE IRQADIRSR Y++K
Sbjct: 199 GITWGVGFRPTLSSLKPIYVSVGHRISLDSAVEVVKITCKYRVPEPIRQADIRSRAYLQK 258

Query: 249 FEMNA 253
            +  +
Sbjct: 259 HQTES 263


>AT4G31150.2 | Symbols:  | endonuclease V family protein |
           chr4:15143907-15145469 REVERSE LENGTH=263
          Length = 263

 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/240 (61%), Positives = 185/240 (77%), Gaps = 8/240 (3%)

Query: 22  QDTLREKLITEDSFPWKAPSTG--------LRYVGGVDISFSKDDPSRACGTLVVLDFHT 73
           QD L++KLI  D F WK  S+         L+YVGGVD+SF K+D S AC  LVVL+  +
Sbjct: 10  QDELKKKLIAYDDFTWKLSSSTELSQGSEILKYVGGVDMSFCKEDSSVACACLVVLELPS 69

Query: 74  LQVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHPR 133
           L+VV+ DFSL+ L VPYVPGFLAFREAPVLL IL+KM+   +PFYPQ++MVDGNGILHPR
Sbjct: 70  LRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHPFYPQVLMVDGNGILHPR 129

Query: 134 GFGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIWG 193
           GFGLACH+GV+A+LPTIG+GKNLHHVDGL+QS V++ L  + N  +  ITLVG SG  WG
Sbjct: 130 GFGLACHLGVLAHLPTIGVGKNLHHVDGLNQSEVKQSLQLQINEHEQTITLVGNSGITWG 189

Query: 194 AAMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQADIRSRDYIRKFEMNA 253
              R T  S+KPI++S+GHRISL +A+ +V++TCKYRVPE IRQADIRSR Y++K +  +
Sbjct: 190 VGFRPTLSSLKPIYVSVGHRISLDSAVEVVKITCKYRVPEPIRQADIRSRAYLQKHQTES 249