Miyakogusa Predicted Gene

Lj5g3v0553260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0553260.1 CUFF.53330.1
         (1506 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | c...   697   0.0  
AT2G33340.2 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    55   5e-07
AT2G33340.1 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    55   5e-07
AT2G33340.3 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    55   5e-07

>AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 |
            chr4:15145936-15152939 FORWARD LENGTH=1883
          Length = 1883

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/841 (49%), Positives = 509/841 (60%), Gaps = 67/841 (7%)

Query: 19   FDRDDNDDCFKECYIGGKDISALVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKTAA 78
             +R+DND+CF+ C IG K+I+ LV++                            LVKTAA
Sbjct: 388  IEREDNDECFQGCIIGTKNITDLVKRAVGAAETEARAAHAPDDAAKAAGDAAAELVKTAA 447

Query: 79   SEEFKSTNNEEXXXXXXXXXXWTVTDAAXXXXXXXXXXXXNKETENAGVQDTESCEDVED 138
             EEFKS+ +EE           TV DAA               + N     ++   DV +
Sbjct: 448  LEEFKSSGSEEAAVSAATRAAITVIDAAEV-------------SRNPTCVTSDQTTDVSE 494

Query: 139  YCIPDTQSLLQLREKYCIQCXXXXXXXXXXXXXXXHEKGVDVCLALLQQNSKHQEPSEVA 198
              +PD +SL QL+EKYCIQC               HEKGVDVC+ LL++ S+  + S V+
Sbjct: 495  VSLPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEKGVDVCIVLLERTSQLDDRSTVS 554

Query: 199  LLLPDVMKMICALAAHRKFAALFVDRGGMGKLLGVPRMAQTFFGLSSCLFAIGSVQGIME 258
             LLPDVMK+ICALAAHRKFAA+FV+R G+ KLL VPR+++TF+GLSSCL+ IGS+QGIME
Sbjct: 555  PLLPDVMKLICALAAHRKFAAMFVERRGILKLLAVPRVSETFYGLSSCLYTIGSLQGIME 614

Query: 259  RVCALSSDVIYRLVELALQLLECNQEQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLG 318
            RVCAL   VI+++V+LA++LL+C+Q+QARKN                    QD LQKLL 
Sbjct: 615  RVCALPLVVIHQVVKLAIELLDCSQDQARKNSALFFAAAFVFRAILDAFDAQDSLQKLLA 674

Query: 319  LLNDAAMLRXXXXXXXXXXXXXXXXXXDRSS-EVLTSFEKQIAYHTCVALRQYFRAHLLL 377
            +L DAA +R                  DRS+ EV+TS EKQ+A+HTC ALRQYFRAHLLL
Sbjct: 675  ILKDAASVRTGANT-------------DRSAPEVMTSSEKQMAFHTCFALRQYFRAHLLL 721

Query: 378  LVDSIRPNKSNRSA--SRNIPSVRAAHRPLDISDEAMDAVFLQLQKDRKLGSSFVRTRWP 435
            LVDSIRP++ +R    S   P++RAA++PLDIS+EA+DA+FLQLQKDR+LG +FV+ +WP
Sbjct: 722  LVDSIRPSRISRGGVPSSMKPNIRAAYKPLDISNEAVDAIFLQLQKDRRLGPTFVKAQWP 781

Query: 436  AVDKFLACNGHVTMLELCQGPPPPVERYLHDLLQYALDVLHIVTLVPSSRKMIVTATLSN 495
            AV+ FLA +GHVTMLELCQ PP  V+RYLHDLLQYA  VLHIVT +P  RK I  ATLSN
Sbjct: 782  AVNNFLASSGHVTMLELCQTPP--VDRYLHDLLQYAFGVLHIVTSIPDGRKAIAHATLSN 839

Query: 496  NRVGTAVILDAANIVSNHDDPEIIRPALNVLVNLVCPPPSISNKPASVTPGQQSASAQTS 555
            NR G AVILDAANI ++  DPEII+PALNVL+NLVCPPPS+SNKP  +    Q    Q +
Sbjct: 840  NRAGIAVILDAANISNSIVDPEIIQPALNVLINLVCPPPSLSNKPP-LAQNHQPVPGQAT 898

Query: 556  KGPMSETRDRTAERNVSDRPVNFSSQTDTREQNAESNAVDRDGAAAVNTQTVLAATSGLV 615
              P ++                               AV            V  A+SGLV
Sbjct: 899  TRPSTDV------------------------------AVGTQSTGNAPQTPVAPASSGLV 928

Query: 616  GDHRISXXXXXXXXXXXXXXXXXYRQAREAVRANNGIKVLLHLLQQRIY-SPPXXXXXXX 674
            GD RI                  YRQAREAVR N+GIK+LL LLQ RIY +PP       
Sbjct: 929  GDRRIFLGAGTGSAGLAAKLEQVYRQAREAVRGNDGIKILLKLLQPRIYVNPPATPDCLR 988

Query: 675  XXXXXXXXXXXXDDIIAHILTKLQVGKKLSELIRDSGSQTHGTEQGRWQAELSQAAIELI 734
                        DD IA ILTKL+VGK LSELIRDSG Q+ GT+QGRWQAEL+Q A+ELI
Sbjct: 989  ALACRVLLGLARDDTIAQILTKLEVGKSLSELIRDSGGQSSGTDQGRWQAELAQVALELI 1048

Query: 735  GVVTNSGHXXXXXXXXXXXXXXXXIEREAIAPATPISYDSRELLQLIHEYVRASGLSQTA 794
            G+VTNSGH                IER AIA ATPI+YDS+ELL LIHE+++ASGL  TA
Sbjct: 1049 GIVTNSGHATTLTASDAATPTLRRIERAAIAAATPITYDSKELLLLIHEHLQASGLGDTA 1108

Query: 795  SILLKEAQLKPLPSLIAPSSLAQPPSTQE--APSVQLQWPSGRA-PGFLSDKLKLNAGDD 851
            S LLKEAQL PL    A  S     +TQE   P  Q QWPSGRA  GF + K K+ A D+
Sbjct: 1109 SALLKEAQLTPL-PSSASPSSIAYSTTQEMSTPLAQEQWPSGRANSGFFTSKPKVCAHDE 1167

Query: 852  D 852
            D
Sbjct: 1168 D 1168



 Score =  629 bits (1621), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 333/628 (53%), Positives = 431/628 (68%), Gaps = 47/628 (7%)

Query: 810  IAPSSLAQPPSTQEAPSVQLQWPSGRAP-GFLSDKLKLNAGDDDVLGSDVSTRIGSAFTX 868
            +A S+L  P      P  Q QWPSGRA  GF     K+NA D+D      S+R  +A + 
Sbjct: 1184 LASSTLEMP-----TPVAQQQWPSGRANCGFCPSIPKINARDEDP-----SSRGNAAPSA 1233

Query: 869  XXXXXXXXXXXXXXXRHQL--DDSRQSSVRKVSSTSKGSSETAIVSETPSKLLEKHNIDS 926
                           R Q    D+   S ++++  S      A  SET ++L+ K+++D+
Sbjct: 1234 KKKQLTFSPSFSSQSRKQSFSHDALPQSTQRINCCSNSDPALADTSETAAELVLKNDLDA 1293

Query: 927  ESQYKTPIILPMKRKLSDLKDTRVLSSSRKRLIAGDHGIRSPICITPNTVRKTNLQTDAI 986
            ++Q+KTPI  P KRKLS+L+D+ V     KR+  G+              R+ +   D  
Sbjct: 1294 DAQFKTPISFPRKRKLSELRDSSVPG---KRIDLGE--------------RRNSTFADGS 1336

Query: 987  RFPTPSSNLRNQQGRCSVDYVDENQNSMSNLGQFTPSSAA--INDLQHSNSERMTLDSIV 1044
               TP+S L            D NQ+  S LGQ TP+S     +D Q SN ER++LDS+V
Sbjct: 1337 GLQTPASAL------------DANQSGSSRLGQMTPASQLRLPSDPQPSNPERLSLDSLV 1384

Query: 1045 VQYLKHQHLQCPAXXXXXXXXXXXXXXVCPEPKRSLDAASNVTARFKRREFKFIYGGVHG 1104
            VQYLKHQH QC A              VCPEPKR L+A  N+T R   RE +  Y GVHG
Sbjct: 1385 VQYLKHQHRQCLAPITTLPPVSLLHPHVCPEPKRLLEAPLNMTGRLGTRELQSFYSGVHG 1444

Query: 1105 NRKDRQFVYSRFRPWRTCRDDAGALLTCITFLGDSSRIAVGSHNGEVKLFDSNNNNVVES 1164
            NR+DRQFV+SRF+ WR+ RD+  AL TCI  LG ++ IAVGSH GE+K+F++++ +++ES
Sbjct: 1445 NRRDRQFVFSRFKSWRSFRDET-ALFTCIALLGGTNHIAVGSHAGEIKIFEASSGSMLES 1503

Query: 1165 FTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLWDASSLSSGTTHSFDGCKAARFSNSGNV 1224
             +GHQ P+TLVQ +VS +TQLLLSSSS DV+LWDASS++ G  HSFDGCKAA+FSNSG  
Sbjct: 1504 VSGHQAPVTLVQPYVSRDTQLLLSSSSSDVQLWDASSITGGPRHSFDGCKAAKFSNSGLQ 1563

Query: 1225 FAALSSESAQREILLYDIQTCQLESKLSDTSTNFTGRGHVYPLIHFNPSDSMLLWNGVLW 1284
            FAALS E++++++LLYD+QTC    KL+DT T  + R + Y L+HF+P D+++LWNGVLW
Sbjct: 1564 FAALSCEASRKDVLLYDVQTCSPCQKLTDTVT--SSRSNPYSLVHFSPCDTLILWNGVLW 1621

Query: 1285 DQRVSEPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFSLLRSVPSLDQTEITFNAH 1344
            D+R+ E V RFDQFTDYGGGGFHP+ NEVIINSE+WD+R F LLRSVPSLDQT ITFN+ 
Sbjct: 1622 DRRIPEKVRRFDQFTDYGGGGFHPSRNEVIINSEIWDMRTFKLLRSVPSLDQTAITFNSR 1681

Query: 1345 GDVLYAILRRKIEDVMSAVNTRRVKHPLFAAFRTVDAVNYSEIATIPVDRCVLDFATEPT 1404
            GDV+YA+LRR IEDVMSAV+TRRVKHPLFAAFRT+DA+NYS+IATIPVDRC+LDFATEPT
Sbjct: 1682 GDVIYAMLRRNIEDVMSAVHTRRVKHPLFAAFRTLDAINYSDIATIPVDRCLLDFATEPT 1741

Query: 1405 DSIVGLVTMDDQDEMFASARIYEIGRRR 1432
            DS +GL+TM+DQ++MF+SAR+YEIGRRR
Sbjct: 1742 DSFLGLITMEDQEDMFSSARMYEIGRRR 1769


>AT2G33340.2 | Symbols: MAC3B | MOS4-associated  complex 3B |
            chr2:14126584-14131000 REVERSE LENGTH=525
          Length = 525

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 28/224 (12%)

Query: 1142 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 1198
            IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237  IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 1199 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLSDTS 1255
              + + G T   HS +  +A     +   F + S +        YD+ +    +++SD S
Sbjct: 296  DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 1256 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 1308
             N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352  KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 1309 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 1348
             G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406  NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449


>AT2G33340.1 | Symbols: MAC3B | MOS4-associated  complex 3B |
            chr2:14126584-14131000 REVERSE LENGTH=525
          Length = 525

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 28/224 (12%)

Query: 1142 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 1198
            IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237  IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 1199 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLSDTS 1255
              + + G T   HS +  +A     +   F + S +        YD+ +    +++SD S
Sbjct: 296  DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 1256 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 1308
             N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352  KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 1309 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 1348
             G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406  NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449


>AT2G33340.3 | Symbols: MAC3B | MOS4-associated  complex 3B |
            chr2:14126703-14131000 REVERSE LENGTH=485
          Length = 485

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 28/224 (12%)

Query: 1142 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 1198
            IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237  IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 1199 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLSDTS 1255
              + + G T   HS +  +A     +   F + S +        YD+ +    +++SD S
Sbjct: 296  DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 1256 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 1308
             N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352  KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 1309 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 1348
             G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406  NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449