Miyakogusa Predicted Gene

Lj5g3v0539960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0539960.1 Non Chatacterized Hit- tr|I3S4U9|I3S4U9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.45,0,ATP-synt_C,ATPase, F0/V0 complex, subunit C;
VACATPASE,ATPase, V0 complex, proteolipid subunit C; V-,CUFF.53288.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25610.1 | Symbols:  | ATPase, F0/V0 complex, subunit C prote...   284   2e-77
AT4G32530.1 | Symbols:  | ATPase, F0/V0 complex, subunit C prote...   282   7e-77
AT4G32530.2 | Symbols:  | ATPase, F0/V0 complex, subunit C prote...   266   6e-72
AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0 ...    74   7e-14
AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type ...    74   7e-14
AT2G16510.1 | Symbols:  | ATPase, F0/V0 complex, subunit C prote...    74   7e-14
AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0...    74   7e-14
AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD...    74   8e-14
AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD...    56   1e-08

>AT2G25610.1 | Symbols:  | ATPase, F0/V0 complex, subunit C protein
           | chr2:10901585-10902494 REVERSE LENGTH=178
          Length = 178

 Score =  284 bits (727), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/181 (82%), Positives = 158/181 (87%), Gaps = 3/181 (1%)

Query: 1   MSGAATMATRSYVWSTALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKA 60
           MSG A  A+    W  ALV+ISPYTFSAIGIA++IGVSVLGAAWGIYITGSSLIGAAI+A
Sbjct: 1   MSGVAIHASS---WGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEA 57

Query: 61  PRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVG 120
           PRITSKNLISVIFCE            LQTKLESVP S++YD ESLRAGYAIFASGIIVG
Sbjct: 58  PRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVG 117

Query: 121 FANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPS 180
           FANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP+
Sbjct: 118 FANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPT 177

Query: 181 K 181
           K
Sbjct: 178 K 178


>AT4G32530.1 | Symbols:  | ATPase, F0/V0 complex, subunit C protein
           | chr4:15693399-15694958 REVERSE LENGTH=180
          Length = 180

 Score =  282 bits (722), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 148/181 (81%), Positives = 157/181 (86%), Gaps = 1/181 (0%)

Query: 1   MSGAATMATRSYVWSTALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKA 60
           MSG   +   S  W  ALV+ISPYTFSAIGIA++IGVSVLGAAWGIYITGSSLIGAAI+A
Sbjct: 1   MSGVVALGHASS-WGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEA 59

Query: 61  PRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVG 120
           PRITSKNLISVIFCE            LQTKLESVP S++YD ESLRAGYAIFASGIIVG
Sbjct: 60  PRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVG 119

Query: 121 FANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPS 180
           FANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP+
Sbjct: 120 FANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPT 179

Query: 181 K 181
           K
Sbjct: 180 K 180


>AT4G32530.2 | Symbols:  | ATPase, F0/V0 complex, subunit C protein
           | chr4:15693399-15694958 REVERSE LENGTH=210
          Length = 210

 Score =  266 bits (680), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 148/211 (70%), Positives = 157/211 (74%), Gaps = 31/211 (14%)

Query: 1   MSGAATMATRSYVWSTALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKA 60
           MSG   +   S  W  ALV+ISPYTFSAIGIA++IGVSVLGAAWGIYITGSSLIGAAI+A
Sbjct: 1   MSGVVALGHASS-WGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEA 59

Query: 61  PRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVG 120
           PRITSKNLISVIFCE            LQTKLESVP S++YD ESLRAGYAIFASGIIVG
Sbjct: 60  PRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVG 119

Query: 121 FANLVCG------------------------------LCVGIIGSSCALSDAQNSSLFVK 150
           FANLVCG                              LCVGIIGSSCALSDAQNS+LFVK
Sbjct: 120 FANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVK 179

Query: 151 ILVIEIFGSALGLFGVIVGIIMSAQATWPSK 181
           ILVIEIFGSALGLFGVIVGIIMSAQATWP+K
Sbjct: 180 ILVIEIFGSALGLFGVIVGIIMSAQATWPTK 210


>AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0
           complex, subunit C protein | chr4:16568223-16569165
           REVERSE LENGTH=164
          Length = 164

 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 67  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158


>AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type
           H(+)-ATPase C3 | chr4:18147330-18148853 FORWARD
           LENGTH=164
          Length = 164

 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 67  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158


>AT2G16510.1 | Symbols:  | ATPase, F0/V0 complex, subunit C protein
           | chr2:7160007-7160811 REVERSE LENGTH=164
          Length = 164

 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 67  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158


>AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0
           complex, subunit C protein | chr1:6913317-6914322
           FORWARD LENGTH=165
          Length = 165

 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 9   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 67

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 68  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159


>AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
           proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
           LENGTH=166
          Length = 166

 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 10  ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 68

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 69  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 124 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 160


>AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
           proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
           LENGTH=200
          Length = 200

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 40/191 (20%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 10  ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 68

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 69  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123

Query: 140 ----------------------------------SDAQNSSLFVKILVIEIFGSALGLFG 165
                                             ++AQ   LFV +++I IF  AL L+G
Sbjct: 124 VVDCNPDSKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALALYG 183

Query: 166 VIVGIIMSAQA 176
           +IVGII+S++A
Sbjct: 184 LIVGIILSSRA 194