Miyakogusa Predicted Gene

Lj5g3v0539820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0539820.1 tr|Q705X1|Q705X1_LOTJA Cysteine-rich
polycomb-like protein OS=Lotus japonicus GN=cpp1 PE=2
SV=1,99.55,0,CXC,CRC domain; seg,NULL; CRC,CRC domain;
TESMIN/TSO1-LIKE CXC DOMAIN-CONTAINING PROTEIN,NULL;
TESMI,CUFF.53255.1
         (897 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 | c...   213   4e-55
AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC domai...   210   3e-54
AT3G22760.1 | Symbols: SOL1 | Tesmin/TSO1-like CXC domain-contai...   205   2e-52
AT3G04850.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   184   3e-46
AT2G20110.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   131   2e-30
AT2G20110.2 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   131   2e-30
AT4G29000.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   130   3e-30
AT5G25790.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   126   6e-29
AT3G16160.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing...   111   2e-24

>AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 |
           chr4:8481522-8484825 REVERSE LENGTH=674
          Length = 674

 Score =  213 bits (543), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 176/326 (53%), Gaps = 70/326 (21%)

Query: 312 ASLKYHGIRRRCLKFGEAASSALGSNMSNMKLNATSSQMHFVNPFKPVSSLYLQRGIPET 371
            SL + GIRRRCL F E   +   S+ +N     +SS+   V P                
Sbjct: 245 VSLLHRGIRRRCLDF-EMPGNKQTSSENNTAACESSSRC--VVP---------------- 285

Query: 372 GSKPAGIGLHLNSIINGMPPSCASTTGMRSSDVLQGMQSTSSISLNKVENMKKYVISSNM 431
                 IGLHLN+I+            M S D    +    S S N    +++  IS+  
Sbjct: 286 -----SIGLHLNAIL------------MSSKDCKTNVTQDYSCSANIQVGLQRS-ISTLQ 327

Query: 432 DRQPLVDNRNEIHE-TDASLAADYFSPSLKEPIALYPASGHDKRKLSPTDAGNSEGLDQH 490
           D   L    NEI E  D  +  +   P+L+E     P     K+K    D+G        
Sbjct: 328 DS--LDQTENEIREDADQDVPVE---PALQELNLSSP-----KKKRVKLDSG-------- 369

Query: 491 TPGXXXXXXXXXADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEK 550
                        +G  CKRCNCKKSKCLKLYC+CFAAGV+C++PCSC DCFNKP + + 
Sbjct: 370 -------------EGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEDV 416

Query: 551 VLETRQQIESRNPLAFAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYC 610
           VL TR+QIESRNPLAFAPK+++++ +     +D +  TP+SARH RGCNCK+S CLKKYC
Sbjct: 417 VLATRKQIESRNPLAFAPKVIRNSDSVQETGDDAS-KTPASARHKRGCNCKKSNCLKKYC 475

Query: 611 ECYQSNVGCSSGCRCEGCKNVYGKKE 636
           ECYQ  VGCS  CRCEGCKN +G+K+
Sbjct: 476 ECYQGGVGCSINCRCEGCKNAFGRKD 501


>AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC
           domain-containing protein | chr3:8048927-8052058 FORWARD
           LENGTH=695
          Length = 695

 Score =  210 bits (535), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 110/134 (82%), Gaps = 1/134 (0%)

Query: 503 ADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIESRN 562
            +G  CKRCNCKKSKCLKLYC+CFAAGV+C++PCSC DCFNKP + E VL TR+QIESRN
Sbjct: 395 GEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEETVLATRKQIESRN 454

Query: 563 PLAFAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYCECYQSNVGCSSG 622
           PLAFAPK++++A +     +D +  TP+SARH RGCNCK+S C+KKYCECYQ  VGCS  
Sbjct: 455 PLAFAPKVIRNADSIMEASDDAS-KTPASARHKRGCNCKKSNCMKKYCECYQGGVGCSMN 513

Query: 623 CRCEGCKNVYGKKE 636
           CRCEGC NV+G+K+
Sbjct: 514 CRCEGCTNVFGRKD 527


>AT3G22760.1 | Symbols: SOL1 | Tesmin/TSO1-like CXC
           domain-containing protein | chr3:8044622-8047381 FORWARD
           LENGTH=609
          Length = 609

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 174/333 (52%), Gaps = 69/333 (20%)

Query: 304 NISQDGSEASLKYHGIRRRCLKFGEAASSALGSNMSNMKLNATSSQMHFVNPFKPVSSLY 363
           N S+     S+ + G+RRRCL F        G+N   +  +++S  +             
Sbjct: 191 NESESVDALSILHRGVRRRCLDF-----EVKGNNQQTLGESSSSCVV------------- 232

Query: 364 LQRGIPETGSKPAGIGLHLNSIINGMPPSCASTTGMRSSDVLQGMQSTSSISLNKVENMK 423
                         IGLHLN+I         +     S ++  G+QS    SL  V + +
Sbjct: 233 ------------PSIGLHLNTIAMSSKDKNVANEYSFSGNIKVGVQS----SLTPVLHSQ 276

Query: 424 KYVISSNMDRQPLVDNRNEIHETDASLAADYFSPSLKEPIALYPASGHDKRKLSPTDAGN 483
             ++  N   +   D+   I     SLA+          + L P S   KR+ S      
Sbjct: 277 HDIVRENESGK---DSGQIIEVVPKSLAS----------VDLTPISPKKKRRKS------ 317

Query: 484 SEGLDQHTPGXXXXXXXXXADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFN 543
               +Q   G            + CKRCNCKKSKCLKLYC+CFAAG +C++PCSC +CFN
Sbjct: 318 ----EQSGEGD-----------SSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFN 362

Query: 544 KPEYGEKVLETRQQIESRNPLAFAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRS 603
           KP + + VL TR+QIESRNPLAFAPK+++++ +     ED +  TP+SARH RGCNCK+S
Sbjct: 363 KPIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVGEDAS-KTPASARHKRGCNCKKS 421

Query: 604 MCLKKYCECYQSNVGCSSGCRCEGCKNVYGKKE 636
            CLKKYCECYQ  VGCS  CRCEGCKN +G+K+
Sbjct: 422 NCLKKYCECYQGGVGCSINCRCEGCKNAFGRKD 454


>AT3G04850.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr3:1332269-1335851 REVERSE LENGTH=639
          Length = 639

 Score =  184 bits (466), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 176/333 (52%), Gaps = 49/333 (14%)

Query: 315 KYHGIRRRCLKFGEAASSA---LGSNMSNMKLNATSSQMHFVNPF-KPVSSLYL-QRGIP 369
           K   +RRRCL F    S     L  + +++ L++TS     +N    P + L   ++   
Sbjct: 297 KQRSVRRRCLTFDMGGSHKRIPLRDSTNDLPLDSTS-----INKAPSPQNCLDTSKQDTD 351

Query: 370 ETGSKPAGIGLHLNSIINGMPPSCASTTGMRSSDVLQGMQSTSSISLNKVENMKKYVISS 429
           E    P  IGLHLN  +N   PS +S  G +   +  G    S+     +E+     +S+
Sbjct: 352 EILPIPRTIGLHLNGFVN---PSVSS--GRKKKKIKDGQAFPSTTFHYNIEDEFSTPVST 406

Query: 430 NMDRQPLVDNRNEIHETDASLAADYFSPSLKEPIALYPASGHDKRKLSPTDAGNSEGLDQ 489
             D     D +  +   + S+  + F   +            + R+LS       +GLD+
Sbjct: 407 KRDLVVFSDVKI-MEPPERSVEGECFDQLM----------AMENRQLS-------QGLDE 448

Query: 490 HTPGXXXXXXXXXADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGE 549
                             CKRC C+KS+CLKLYC+CF+AG+FC +PCSCQ+CFNKP + +
Sbjct: 449 L---------------GSCKRCKCRKSQCLKLYCECFSAGLFCGEPCSCQNCFNKPIHED 493

Query: 550 KVLETRQQIESRNPLAFAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKY 609
            V+++R+ I++RNPLAFAPK+V S ++   ++   N  TP+SARH RGCNC++S C KKY
Sbjct: 494 LVMKSREVIKARNPLAFAPKVV-STSDTVIDLWVENSKTPASARHKRGCNCRKSGCSKKY 552

Query: 610 CECYQSNVGCSSGCRCEGCKNVYGKKEDYVAPD 642
           CEC+   VGCSS CRC GCKN +G   +  A D
Sbjct: 553 CECFMMGVGCSSNCRCMGCKNTFGHTNEQCAGD 585


>AT2G20110.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr2:8684496-8686870 FORWARD LENGTH=571
          Length = 571

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 8/128 (6%)

Query: 509 KRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIES---RNPLA 565
           K+CNCK S+CLKLYC+CFA+G +C D C+C +CFN  E        RQ +ES   RNP A
Sbjct: 119 KQCNCKHSRCLKLYCECFASGTYC-DGCNCVNCFNNVENEPA---RRQAVESTLERNPNA 174

Query: 566 FAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYCECYQSNVGCSSGCRC 625
           F PKI  S      N E+V       ARH +GC+CK+S CLKKYCEC+Q+N+ CS  C+C
Sbjct: 175 FRPKIAASPHGGRDNREEVGDVV-MLARHNKGCHCKKSGCLKKYCECFQANILCSENCKC 233

Query: 626 EGCKNVYG 633
             CKN  G
Sbjct: 234 LDCKNFEG 241


>AT2G20110.2 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr2:8684496-8686870 FORWARD LENGTH=578
          Length = 578

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 8/128 (6%)

Query: 509 KRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIES---RNPLA 565
           K+CNCK S+CLKLYC+CFA+G +C D C+C +CFN  E        RQ +ES   RNP A
Sbjct: 119 KQCNCKHSRCLKLYCECFASGTYC-DGCNCVNCFNNVENEPA---RRQAVESTLERNPNA 174

Query: 566 FAPKIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYCECYQSNVGCSSGCRC 625
           F PKI  S      N E+V       ARH +GC+CK+S CLKKYCEC+Q+N+ CS  C+C
Sbjct: 175 FRPKIAASPHGGRDNREEVGDVV-MLARHNKGCHCKKSGCLKKYCECFQANILCSENCKC 233

Query: 626 EGCKNVYG 633
             CKN  G
Sbjct: 234 LDCKNFEG 241


>AT4G29000.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr4:14293957-14296602 FORWARD LENGTH=603
          Length = 603

 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 2/128 (1%)

Query: 509 KRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIESRNPLAFAP 568
           K+CNCK S+CLKLYC+CFA+G +C D C+C +CFN  +      E  +    RNP AF P
Sbjct: 132 KQCNCKHSRCLKLYCECFASGTYC-DGCNCVNCFNNVDNEPARREAVEATLERNPFAFRP 190

Query: 569 KIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYCECYQSNVGCSSGCRCEGC 628
           KI  S        ED+        +H +GC+CK+S CLKKYCEC+Q+N+ CS  C+C  C
Sbjct: 191 KIASSPHGGRDKREDIGEVV-LLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDC 249

Query: 629 KNVYGKKE 636
           KN  G +E
Sbjct: 250 KNFEGSEE 257



 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 24/108 (22%)

Query: 437 VDNRNEIHE-TDASLAADYFSPSLKEPIALYPASGHDKRKLSPTDAGNSEGLDQHTPGXX 495
           VDN     E  +A+L  + F+   +  IA  P  G DKR+    D G    L +H  G  
Sbjct: 167 VDNEPARREAVEATLERNPFA--FRPKIASSPHGGRDKRE----DIGEVVLLGKHNKG-- 218

Query: 496 XXXXXXXADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFN 543
                          C+CKKS CLK YC+CF A + C + C C DC N
Sbjct: 219 ---------------CHCKKSGCLKKYCECFQANILCSENCKCLDCKN 251


>AT5G25790.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr5:8977233-8979181 REVERSE LENGTH=459
          Length = 459

 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 8/131 (6%)

Query: 509 KRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIESRNPLAFAP 568
           K CNCK SKCLKLYC+CFA+G +C + C+C +C NK E           I  RNP AF P
Sbjct: 95  KHCNCKNSKCLKLYCECFASGSYC-NGCNCVNCHNKLENESSRQVAISGILERNPDAFKP 153

Query: 569 KIVKSATNAPSNMEDVNLTTPSS---ARHTRGCNCKRSMCLKKYCECYQSNVGCSSGCRC 625
           KI  S    P  M+D+           +H++GC+C++S CLKKYCECYQ+N+ CS  CRC
Sbjct: 154 KIAGS----PHGMKDLQENVQQVLLIGKHSKGCHCRKSGCLKKYCECYQANILCSENCRC 209

Query: 626 EGCKNVYGKKE 636
           + CKN  G +E
Sbjct: 210 QDCKNFEGSEE 220



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 505 GNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFN 543
           G   K C+C+KS CLK YC+C+ A + C + C CQDC N
Sbjct: 176 GKHSKGCHCRKSGCLKKYCECYQANILCSENCRCQDCKN 214


>AT3G16160.1 | Symbols:  | Tesmin/TSO1-like CXC domain-containing
           protein | chr3:5473366-5475090 REVERSE LENGTH=368
          Length = 368

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 75/123 (60%), Gaps = 5/123 (4%)

Query: 509 KRCNCKKSKCLKLYCDCFAAGVFCLDPCSCQDCFNKPEYGEKVLETRQQIESRNPLAFAP 568
           K C CK+SKCLKLYCDCFA+GV C D C C DC N  E  +        +  RNP AF+ 
Sbjct: 66  KGCRCKQSKCLKLYCDCFASGVVCTD-CDCVDCHNNSEKCDAREAAMVNVLGRNPNAFSE 124

Query: 569 KIVKSATNAPSNMEDVNLTTPSSARHTRGCNCKRSMCLKKYCECYQSNVGCSSGCRCEGC 628
           K + S T+  +  +    T P     +RGC CKR+ CLKKYCEC+Q+N+ CS  C+C  C
Sbjct: 125 KALGSLTD--NQCKAAPDTKP--GLLSRGCKCKRTRCLKKYCECFQANLLCSDNCKCINC 180

Query: 629 KNV 631
           KNV
Sbjct: 181 KNV 183