Miyakogusa Predicted Gene
- Lj5g3v0539710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539710.1 Non Chatacterized Hit- tr|C6TLC4|C6TLC4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,95.12,1e-38,helicase superfamily c-terminal domain,Helicase,
C-terminal; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.53243.1
(91 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 148 8e-37
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 1e-36
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 1e-36
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 1e-36
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 2e-36
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 84 2e-17
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 84 2e-17
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 84 2e-17
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 83 3e-17
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 83 3e-17
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 83 3e-17
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 83 3e-17
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 83 4e-17
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 80 3e-16
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 80 3e-16
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 80 4e-16
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 80 4e-16
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 1e-15
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 1e-15
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 77 2e-15
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 75 7e-15
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 74 1e-14
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 74 2e-14
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 74 2e-14
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 73 5e-14
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 72 5e-14
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-14
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 8e-14
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 8e-14
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 8e-14
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 71 1e-13
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 71 1e-13
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 70 2e-13
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 70 3e-13
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 70 3e-13
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 70 3e-13
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 70 3e-13
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 70 3e-13
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 69 5e-13
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 69 6e-13
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 69 8e-13
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 67 2e-12
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 67 2e-12
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 2e-12
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 67 3e-12
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 67 3e-12
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 67 4e-12
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 66 4e-12
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 65 9e-12
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 65 9e-12
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 64 2e-11
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 64 2e-11
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 62 8e-11
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 61 1e-10
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 60 2e-10
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 60 3e-10
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 59 5e-10
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 59 6e-10
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 58 1e-09
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 58 1e-09
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 58 1e-09
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 57 2e-09
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 54 2e-08
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 53 4e-08
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 53 5e-08
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 52 7e-08
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 52 7e-08
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 52 8e-08
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 50 2e-07
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 50 2e-07
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 50 4e-07
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 49 6e-07
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 49 7e-07
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 49 8e-07
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 48 1e-06
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 148 bits (373), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L RYK FKEG RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 245 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 304
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFV+ A+D +VLN VQ RFEV
Sbjct: 305 AITFVASASDSEVLNQVQERFEV 327
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L RYK FKEG RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 387 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 446
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFV+ A+D +VLN VQ RFEV
Sbjct: 447 AITFVASASDSEVLNQVQERFEV 469
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L RYK FKEG RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFV+ A+D +VLN VQ RFEV
Sbjct: 388 AITFVASASDSEVLNQVQERFEV 410
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L RYK FKEG RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFV+ A+D +VLN VQ RFEV
Sbjct: 388 AITFVASASDSEVLNQVQERFEV 410
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 147 bits (370), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L RYK FKEG RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 369 LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 428
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFV+ A+D +VLN VQ RFEV
Sbjct: 429 AITFVASASDSEVLNQVQERFEV 451
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 382 VTL-DDQRMLFDIQKFYNV 399
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 317 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 376
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 377 VTL-DDQRMLFDIQKFYNV 394
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G +R+L+ TD+ RGID+++V++VIN+D+P++ + Y+HR+GR+GRFG KG+AI FV
Sbjct: 320 FRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 379
Query: 75 CATDVDVLNNVQSRF 89
+ D+ +L +++ +
Sbjct: 380 -SDDIKILRDIEQYY 393
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 312 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 371
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 372 VT-RDDERMLFDIQKFYNV 389
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 382 VT-RDDERMLFDIQKFYNV 399
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 317 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 376
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 377 VT-RDDERMLFDIQKFYNV 394
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 324 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 383
Query: 73 VSCATDVDVLNNVQSRFEV 91
++ + D ++ ++Q + V
Sbjct: 384 MT-SEDERMMADIQRFYNV 401
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 50/62 (80%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 73 VS 74
V+
Sbjct: 382 VT 383
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P ++++YLHRVGR+GRFG GLA+
Sbjct: 434 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVN 493
Query: 72 FVS 74
V+
Sbjct: 494 LVT 496
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G+ +L+ATD++ RG+D + +N VIN+D PDSA Y+HR+GR+GR G G AITF +
Sbjct: 426 FRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT 485
Query: 75 CATDVDVLNNV 85
DV L N+
Sbjct: 486 -EQDVPFLRNI 495
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P +A+TYLHRVGR+GRFG GLA+
Sbjct: 411 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVN 470
Query: 72 FVS 74
++
Sbjct: 471 LIT 473
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P +A+TYLHRVGR+GRFG GLA+
Sbjct: 411 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVN 470
Query: 72 FVS 74
++
Sbjct: 471 LIT 473
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P ++++YLHRVGR+GRFG GLA+
Sbjct: 404 FHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVN 463
Query: 72 FVS 74
V+
Sbjct: 464 LVT 466
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P ++++YLHRVGR+GRFG GLA+
Sbjct: 404 FHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVN 463
Query: 72 FVS 74
V+
Sbjct: 464 LVT 466
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ ++R+L+A+D+ RGID++ V+ VIN+D+P++ + Y+HR+GRAGRFG +G+AI FV
Sbjct: 307 FRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVK 366
Query: 75 CATDVDVLNNVQSRF 89
++D+ L +++ +
Sbjct: 367 -SSDMKDLKDIERHY 380
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 75.5 bits (184), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADT-------YLHRVGRAGR 62
K K FKE T++L+ATD++ RG D +RVN+V+N+++P +T YLHRVGRAGR
Sbjct: 381 KIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGR 440
Query: 63 FGTKGLAIT-FVSCATDVDVLNNVQSRFE 90
FG KG + D +V+ ++ FE
Sbjct: 441 FGRKGAVFNLLLDDGWDKEVMEKIEKYFE 469
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
K FK G+T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G GLA F
Sbjct: 462 KAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAF 521
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + +V+N+D P+ + Y+HR+GR GR G GLA TF
Sbjct: 519 FRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + +V+N+D P+ + Y+HR+GR GR G GLA TF
Sbjct: 451 FRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 72.8 bits (177), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G+T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G GLA F
Sbjct: 449 RSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAF 508
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 72.4 bits (176), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 44/60 (73%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G++ I+ ATD+ RG+D++ + V+N+D P++ + Y+HR+GR GR G KG+A TF +
Sbjct: 456 FKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFT 515
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 72.0 bits (175), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+GF+ + +LVATD+VGRGIDI V VIN+DMP + Y HR+GR GR G G+A +F
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSF 679
Query: 73 VS 74
++
Sbjct: 680 LT 681
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 72.0 bits (175), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G+T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G G+A F
Sbjct: 452 RSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAF 511
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 72.0 bits (175), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G+T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G G+A F
Sbjct: 452 RSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAF 511
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 72.0 bits (175), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G+T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G G+A F
Sbjct: 452 RSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAF 511
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G++ +L+ATD+ RG+DI+ + +VIN+D P + Y+HR+GR GR G G+A TF +
Sbjct: 725 FRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFT 784
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G++ I+ ATD+ RG+D++ V VIN+D P S + Y+HR+GR GR G KG A TF +
Sbjct: 390 FRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
Query: 75 CA 76
A
Sbjct: 450 VA 451
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FKEG +LVATD+ RG+DI V +VIN+ P + + Y+HR+GR GR G KG+A TF +
Sbjct: 412 FKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + V+N+D P+ + Y+HR+GR GR G G A TF
Sbjct: 448 FRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + V+N+D P+ + Y+HR+GR GR G G A TF
Sbjct: 448 FRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + V+N+D P+ + Y+HR+GR GR G G A TF
Sbjct: 448 FRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + V+N+D P+ + Y+HR+GR GR G G A TF
Sbjct: 448 FRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 69.7 bits (169), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L FK G+ IL+ATD+ RG+DI V++VIN+D+P Y+HRVGR R G GL
Sbjct: 342 LSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGL 401
Query: 69 AITFVSCATDVDVLNNVQ 86
A++ ++ TDV +++ ++
Sbjct: 402 AVSIIT-ETDVKLIHKIE 418
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 69.3 bits (168), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G+ ILV TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+ I+ V+
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVN 365
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 68.9 bits (167), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 443 FKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 502
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK+ + +LV TD++GRG+DI + VIN+DMP++ D Y HR+GR GR G G+A TF++
Sbjct: 510 FKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLT 569
Query: 75 CATDVDVLNNVQSRF 89
D DV ++ +
Sbjct: 570 LE-DKDVFYGLKQKL 583
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 44/57 (77%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
GF++G ILVATD+ RG+D+ V++VI++++P++ +T++HR GR GR G KG AI
Sbjct: 405 GFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAI 461
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
GF++G ILVATD+ RG+D+ V+++I++++P++ +T++HR GR GR G KG AI
Sbjct: 393 GFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIY 452
Query: 74 S 74
S
Sbjct: 453 S 453
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 394 FKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFIN 453
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +L+AT + RG+D++ + +V+N D P+ + Y+HRVGR GR G KG A+TF+S
Sbjct: 484 FKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 543
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K FK +L+AT + RG+D++ + +V+N D P+ + Y+HRVGR GR G KG A
Sbjct: 655 KSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCA 714
Query: 70 ITFVS 74
+TF+S
Sbjct: 715 VTFIS 719
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 66.6 bits (161), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +L+AT + RG+D++ + +V+N D P+ + Y+HRVGR GR G KG A+TF+S
Sbjct: 822 FKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 881
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K K F++G ++LVA+D + RG+D++ V VIN+DMP A T++HR GR R G G
Sbjct: 379 KELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRC 438
Query: 70 ITFVS 74
T +S
Sbjct: 439 FTLLS 443
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 6 HTGLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGT 65
H + F++G+ +LVATD+ RG+DI V++VI++++P+ +T++HR GR GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 66 KGLAI 70
+G AI
Sbjct: 447 EGSAI 451
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 6 HTGLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGT 65
H + F++G+ +LVATD+ RG+DI V++VI++++P+ +T++HR GR GR G
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 446
Query: 66 KGLAI 70
+G AI
Sbjct: 447 EGSAI 451
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 6 HTGLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGT 65
H + F++G+ +LVATD+ RG+DI V++VI++++P+ +T++HR GR GR G
Sbjct: 294 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 353
Query: 66 KGLAI 70
+G AI
Sbjct: 354 EGSAI 358
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + L+ATD+ RG+DI V VIN+ P D+Y+HRVGR R G +G A+TFV
Sbjct: 458 FRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFV- 516
Query: 75 CATDVD 80
TD D
Sbjct: 517 --TDSD 520
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LK F+ + IL+ATDLV RGIDI+ V +I++ +P SA+ Y+HR GR R G
Sbjct: 542 LKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGC 601
Query: 69 AITFV 73
+I +
Sbjct: 602 SIALI 606
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
K FK G+ ++LV +L RG+D+ ++V+N ++P A Y HR GR GR G KG +T
Sbjct: 451 KKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVT 509
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK + +L++TD+ RG+D +V +I +D P A Y+HRVGR R G KG A+ F+
Sbjct: 395 FKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQ 454
Query: 75 CATDVDVLNNVQ 86
++D L ++
Sbjct: 455 -PIEIDYLKELK 465
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTK-G 67
++ + FK G +L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G + G
Sbjct: 513 METLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDG 572
Query: 68 LAITFVS 74
+A T V+
Sbjct: 573 VAYTLVT 579
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
GF+ G+ LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+T
Sbjct: 391 GFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTL 449
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ +T +L+ TD+ RGIDI ++ VIN D P ++HRVGRA R G G A +FV+
Sbjct: 317 FRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F G+ +LV+T ++GRG+D+ V VI DMP + Y+H +GRA R G KG AI FV+
Sbjct: 267 FLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVN 326
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
F G+ +LV+T ++GRG+D+ V VI DMP + Y+H +GRA R G KG AI FV
Sbjct: 403 SFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFV 462
Query: 74 S 74
+
Sbjct: 463 N 463
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
F G+ +LV+T ++GRG+D+ V VI DMP + Y+H +GRA R G KG AI FV
Sbjct: 403 SFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFV 462
Query: 74 S 74
+
Sbjct: 463 N 463
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
F E + +L+ TD+ RG+DI ++ V+ +D P D ++HRVGR R +G AI F+
Sbjct: 315 FTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LK++K +EG LV TDL RG+D++ V+ V+ D P ++ YLHR GR R G KG
Sbjct: 413 LKKFKD-EEGDCPTLVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTARMGAKGK 470
Query: 69 AITFVS 74
+ VS
Sbjct: 471 VTSLVS 476
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGL 68
K + F + + IL+ TD+ RG+DI V+ +I +D PD Y+HRVGR R G KG
Sbjct: 375 KTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGK 434
Query: 69 AI 70
A+
Sbjct: 435 AL 436
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
Y F E Q+ +L TD++ RG+D ++ V+ V+ D P+ +Y+HRVGR RF T+G ++
Sbjct: 361 YSQFIERQS-VLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSL 419
Query: 71 TFVS 74
F++
Sbjct: 420 LFLT 423
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 16 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
++G +LV+TD+ RGID+ + N D+P + YLHR GRAGR
Sbjct: 231 RQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 16 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
++G +LV+TD+ RGID+ + N D+P + YLHR GRAGR
Sbjct: 388 RQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 434
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K F + + L+ TD+ RG+DI ++ V+ +D P + + HR GR R G +G A
Sbjct: 319 KALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRA 378
Query: 70 ITFV 73
I F+
Sbjct: 379 IVFL 382
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ ++ ILV +D+ RG+D V++V+ +P + Y+HR+GR GR G +G + ++
Sbjct: 384 FRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLA 443
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRF-GTKGLAITFV 73
F + +T IL+ T++ RG+D V+ ++ +D PD+ Y+HRVGR R G KG A+ +
Sbjct: 446 FIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVL 505
Query: 74 S 74
+
Sbjct: 506 T 506
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + ILV +D+ RG+D V++V+ +P + Y+HR+GR GR G +G + ++
Sbjct: 686 FRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLA 745
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FKE ILV +D+ RG++ V +VI +P + Y+HR+GR GR G G + ++
Sbjct: 680 FKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLIA 739
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FKE ILV +D+ RG++ V +VI +P + Y+HR+GR GR G G + ++
Sbjct: 633 FKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIA 692
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 29 VGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
V RGID ++V+ VIN DMP S Y+HR+GR GR
Sbjct: 396 VVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGR 429
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + ILV +D+ RG+D V +V+ +P + Y+HR+GR GR G +G I ++
Sbjct: 624 FRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLA 683