Miyakogusa Predicted Gene
- Lj5g3v0539700.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539700.2 Non Chatacterized Hit- tr|K3XI13|K3XI13_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001080,93.2,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.53242.2
(104 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 192 5e-50
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 192 5e-50
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 191 7e-50
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 191 7e-50
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 191 1e-49
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 1e-15
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 78 1e-15
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 76 6e-15
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 75 7e-15
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 75 9e-15
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 73 4e-14
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 73 4e-14
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 73 4e-14
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 73 5e-14
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 73 5e-14
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 69 8e-13
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 69 8e-13
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 63 4e-11
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 61 2e-10
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 61 2e-10
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 60 3e-10
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 60 3e-10
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 59 5e-10
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 59 6e-10
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 59 8e-10
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 59 8e-10
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 59 8e-10
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 58 1e-09
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 57 2e-09
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 57 3e-09
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 57 4e-09
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 55 7e-09
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 55 8e-09
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 55 9e-09
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 55 1e-08
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 55 1e-08
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 54 1e-08
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 52 1e-07
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 51 1e-07
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 50 2e-07
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 50 2e-07
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 50 2e-07
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 50 3e-07
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 50 4e-07
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 50 4e-07
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 50 4e-07
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 49 7e-07
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 49 9e-07
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 192 bits (487), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQI+P GQVSALVLCHTRELAYQIC+EF RFS +LPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
KV+V YGGVNIK+HKDLLKNECPHIVVGTPGR+LALAR+K+LS
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLS 104
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 192 bits (487), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQI+P GQVSALVLCHTRELAYQIC+EF RFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
KV+V YGGVNIK+HKDLLKNECPHIVVGTPGR+LALAR+K+LS
Sbjct: 144 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLS 187
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 191 bits (486), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQI+P GQVSALVLCHTRELAYQIC+EF RFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
KV+V YGGVNIK+HKDLLKNECPHIVVGTPGR+LALAR+K+LS
Sbjct: 144 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLS 187
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 191 bits (486), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQI+P GQVSALVLCHTRELAYQIC+EF RFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
KV+V YGGVNIK+HKDLLKNECPHIVVGTPGR+LALAR+K+LS
Sbjct: 144 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLS 187
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 191 bits (484), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/104 (86%), Positives = 98/104 (94%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQI+P GQVSALVLCHTRELAYQIC+EF RFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
KV+V YGGVNIK+HKDLLKNECPHIVVGTPGR+LALAR+K+LS
Sbjct: 144 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLS 187
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 79 LDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQI----EKVMRALGD 134
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+K C GG +++ + +L++ H+VVGTPGR+ L R + L
Sbjct: 135 YLGVKAQACVGGTSVREDQRVLQSGV-HVVVGTPGRVFDLLRRQSL 179
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 72 LDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQI----EKVMRALGD 127
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + R + L
Sbjct: 128 YQGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSL 172
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 75.9 bits (185), Expect = 6e-15, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 72 LDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI----EKVMRALGD 127
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + + + L
Sbjct: 128 YLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLKRQSL 172
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 75.5 bits (184), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKT F + TL++IDP + A++L TRELA Q + SK+L +
Sbjct: 193 DILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KI 251
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG +++ D+++ P H++VGTPGRIL LA+
Sbjct: 252 EVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAK 288
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 77 LDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQI----EKVMRALGD 132
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + R + L
Sbjct: 133 YQGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSL 177
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKT F + L++IDP + A++L TRELA Q + SK+L ++
Sbjct: 163 DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NI 221
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG +++ D+++ P H++VGTPGRIL L +
Sbjct: 222 QVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTK 258
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKT F + L++IDP + A++L TRELA Q + SK+L ++
Sbjct: 163 DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NI 221
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG +++ D+++ P H++VGTPGRIL L +
Sbjct: 222 QVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTK 258
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 77 LDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI----EKVMRALGD 132
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + + + L
Sbjct: 133 YLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLKRQSL 177
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 77 LDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI----EKVMRALGD 132
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + + + L
Sbjct: 133 YLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLKRQSL 177
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 67 LDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI----EKVMRALGD 122
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + + + L
Sbjct: 123 YLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLKRQSL 167
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + A+++ TRELA Q + KHL +
Sbjct: 170 DILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KI 228
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL L +
Sbjct: 229 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTK 265
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + A+++ TRELA Q + KHL +
Sbjct: 170 DILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KI 228
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL L +
Sbjct: 229 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTK 265
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
DVI QA+SG GKT++ LS Q +D + +V AL+L TRELA Q + H ++
Sbjct: 74 DVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANI 132
Query: 62 KVAVCYGGVNIKVHKDLLKNE-CPHIVVGTPGRILALARDKEL 103
+ C GG + V +D+ K E H+V GTPGR+ + + + L
Sbjct: 133 QAHACIGGNS--VGEDIRKLEHGVHVVSGTPGRVCDMIKRRSL 173
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVA-------------GQVSALVLCHTRELAYQIC 48
D + Q+ +G GKT ++L L +I P+A ++ A+++ +REL QI
Sbjct: 149 DAVIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIV 208
Query: 49 HEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
E E+ + V GG N ++ LK P IVVGTPGRI +++ +L
Sbjct: 209 REVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKL 263
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQVSALVLCHTRELAYQICHEFERFSKHLP 59
DV+ A++G GKTA F L L ++ DP V ALV+ TRELA+Q+ +F+ L
Sbjct: 97 DVLGLAQTGSGKTAAFALPILHRLAEDPYG--VFALVVTPTRELAFQLAEQFKALGSCL- 153
Query: 60 DLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 97
+L+ +V GG+++ L + PHIV+ TPGRI L
Sbjct: 154 NLRCSVIVGGMDMLTQTMSLVSR-PHIVITTPGRIKVL 190
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--------DPVAGQVSALVLCHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L +++ + D + ALV+C TRELA Q E
Sbjct: 359 DVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANT 418
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
K+ P + V V GG + + + ++ I+V TPGR+
Sbjct: 419 LLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRL 459
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA----------LVLCHTRELAYQICHEF 51
D+I +AK+G GKT F + ++++ AG +A LVL TRELA Q+ E
Sbjct: 48 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 107
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+ + P L YGGV+ + + L +VVGTPGRI+ L + L
Sbjct: 108 K---ESAPYLSTVCVYGGVSYTIQQSALTRGV-DVVVGTPGRIIDLIEGRSL 155
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQVS------ALVLCHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L ++ + P A + S LV+C TRELA Q E
Sbjct: 421 DVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANT 480
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
K+ P + V V GG + + ++ I+V TPGR+
Sbjct: 481 LLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRL 521
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
Query: 2 DVICQAKSGMGKTAVFVLS----TLQQ--IDPVAGQVS--ALVLCHTRELAYQICHEFER 53
D+I A +G GKT VFVL LQ+ + P+A ALV+C +RELA Q E+
Sbjct: 136 DMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQ 195
Query: 54 FSKHL-----PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
F L P L+ +C GGV+++ D++K HIVV TPGR+ + K++S
Sbjct: 196 FVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGV-HIVVATPGRLKDILAKKKMS 250
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 58.5 bits (140), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 19/114 (16%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI----------DPVAGQVSALVLCH-TRELAYQICHE 50
DVI AK+G GKTA FVL + I P+ V+C TRELA+QI E
Sbjct: 267 DVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIG------VICAPTRELAHQIFLE 320
Query: 51 FERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
++FSK L+V+ YGG++ LK C IVV TPGR++ + + K L+
Sbjct: 321 AKKFSKAY-GLRVSAVYGGMSKHEQFKELKAGC-EIVVATPGRLIDMLKMKALT 372
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 58.5 bits (140), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA----------LVLCHTRELAYQICHEF 51
D+I +AK+G GKT F + ++++ AG +A LVL TRELA Q+ E
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+ + P L YGGV+ + + L +VVGTPGRI+ L + L
Sbjct: 201 KESA---PYLSTVCVYGGVSYTIQQSALTRGV-DVVVGTPGRIIDLIEGRSL 248
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 58.5 bits (140), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA----------LVLCHTRELAYQICHEF 51
D+I +AK+G GKT F + ++++ AG +A LVL TRELA Q+ E
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+ + P L YGGV+ + + L +VVGTPGRI+ L + L
Sbjct: 201 KESA---PYLSTVCVYGGVSYTIQQSALTRGV-DVVVGTPGRIIDLIEGRSL 248
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI------DPVAGQVSALVLCHTRELAYQICHEFERFS 55
DV+ A +G GKT F+L ++ I P QV +++ TREL+ QI E F
Sbjct: 55 DVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFV 114
Query: 56 KHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
LP++ + GG ++ + L+ E ++++GTPGR+ + + E
Sbjct: 115 STLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEF 162
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI-------DPVAGQ-----VSALVLCHTRELAYQICH 49
DVI A++G GKT F + LQ + +P G+ A VL TRELA QI
Sbjct: 48 DVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAE 107
Query: 50 EFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
+FE + L+ AV GG++ ++ + + + PH++V TPGR+
Sbjct: 108 QFEALGADI-SLRCAVLVGGID-RMQQTIALGKRPHVIVATPGRL 150
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI----------DPVAGQVSALVLCHTRELAYQICHEF 51
D + +AK+G GK+ F+L ++ + + VA + AL+LC TRELA QI E
Sbjct: 367 DALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVA-PIFALILCPTRELASQIAAEG 425
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
+ K + V GG K+ + L++E I++ TPGR+L
Sbjct: 426 KALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLL 469
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQ------VSALVLCHTRELAYQICHEFER 53
D++ +AK+G GKT F+L +++ + P A + + LV+C TRELA Q E
Sbjct: 119 DILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANI 178
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
K+ P + V V GG + + L+ I+V TPGR+
Sbjct: 179 LLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRL 219
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 2 DVICQAKSGMGKTAVFVLSTL------QQIDPVAGQVS--ALVLCHTRELAYQICHEFER 53
D+I A +G GKT VFVL + + + P+A L++C +RELA Q E+
Sbjct: 185 DMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQ 244
Query: 54 FSKHL-----PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
F L P L+ +C GG++++ +++K HIVV TPGR+ + K++S
Sbjct: 245 FVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGV-HIVVATPGRLKDMLAKKKMS 299
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDP--VAGQVSALVLCHTRELAYQICHEFERFSKHL 58
+DV+ A++G GKTA F++ L+++ G V AL+L TR+LA Q +F+K L
Sbjct: 66 VDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTL----KFTKEL 121
Query: 59 ---PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 97
DL+V++ GG +++ + L + P +++ TPGR++ L
Sbjct: 122 GKFTDLRVSLLVGGDSMEDQFEEL-TKGPDVIIATPGRLMHL 162
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA---LVLCHTRELAYQICHEFERFSKHL 58
D+ A +G GKTA F L TL+++ +V A L+L TRELA QI H +
Sbjct: 206 DLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQI-HSMIQNLAQF 264
Query: 59 PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARD 100
D+K + GG++++ + +L++ P IVV TPGR++ R+
Sbjct: 265 TDIKCGLIVGGLSVREQEVVLRS-MPDIVVATPGRMIDHLRN 305
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
DVI QA+SG GKT++ +S Q ++ + +V LVL +RELA Q + H ++
Sbjct: 61 DVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAH-TNI 119
Query: 62 KVAVCYGGVNIKVHKDLLKNE-CPHIVVGTPGRILALAR 99
+ C GG +I +D+ K E H V GTPGR+ + +
Sbjct: 120 QAHACIGGKSI--GEDIKKLERGVHAVSGTPGRVYDMIK 156
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQ--------VSALVLCHTRELAYQICHEF 51
D++ +A++G GKT FVL L+ + P + S LVL TRELA Q+ +F
Sbjct: 135 DLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADF 194
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
+ + L L YGG + V + LK IVVGTPGRI
Sbjct: 195 DAYGGSL-GLSSCCLYGGDSYPVQEGKLKRGV-DIVVGTPGRI 235
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPV---------AGQVSALVLCHTRELAYQICHEFE 52
D + +AK+G GK+ F+L ++ + + L+LC TRELA QI E +
Sbjct: 414 DALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGK 473
Query: 53 RFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
K+ + V GG ++ + L++E I++ TPGR+L
Sbjct: 474 ALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLL 516
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQ------QIDPVAGQVSALVLCHTRELAYQICHEFERFS 55
DV A +G GKT FV+ ++ P QV +++ TREL+ QI + + F
Sbjct: 55 DVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFV 114
Query: 56 KHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
L ++ + GG +K +++ E ++++GTPGR+
Sbjct: 115 STLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRL 153
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 3 VICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQ---ICHEFERFSKHLP 59
+I QA +G GKT FVL L ++DP + AL +C TRELA Q + + +F+
Sbjct: 134 LIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITA 193
Query: 60 DLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPG---RILALAR 99
+L V G + H+V+GTPG + +A R
Sbjct: 194 ELAVPDSTRGAPAATRGAPV---SAHVVIGTPGTLKKWMAFKR 233
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI----DPVA----------------GQVSALVLCHTR 41
DVI A++G GKT F L LQ++ + V G + AL++ TR
Sbjct: 230 DVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTR 289
Query: 42 ELAYQICHEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 97
ELA Q+ E +K+L +KV GG+ + + LK E P IVV TPGR+ L
Sbjct: 290 ELALQVTEHLENAAKNL-SVKVVPIVGGMFSEKQERRLK-EKPEIVVATPGRLWEL 343
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---PVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI + +G GKTA FVL L I P+ + ALV+ TRELA+QI E +
Sbjct: 241 DVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVK 300
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
FS++L K G +I+ L C IV+ TPGR+L
Sbjct: 301 FSRYL-GFKAVSITGWESIEKQALKLSQGC-EIVIATPGRLL 340
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---PVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI A++G GKTA FVL L I P++ + A+V+ TRELA QI E +
Sbjct: 352 DVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVK 411
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
F+ +L +V GG +I+ + C IV+ TPGR++
Sbjct: 412 FAHYL-GFRVTSIVGGQSIEEQGLKITQGC-EIVIATPGRLI 451
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---PV-AGQVS-ALVLCHTRELAYQICHEFERFSK 56
D I AK+G GKT FVL L+ I PV AG LV+ TREL QI + +FSK
Sbjct: 435 DCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSK 494
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
L + V V YGG + LK IVV TPGR++
Sbjct: 495 ALGIICVPV-YGGSGVAQQISELKRGT-EIVVCTPGRMI 531
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTL------QQIDPVAGQVS----ALVLCHTRELAYQICHEF 51
D++ A++G GKTA F + Q ++ G + A++L TRELA QI E
Sbjct: 190 DLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEA 249
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
++FS + +KV V YGG I L+ C I+V TPGR+
Sbjct: 250 KKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPGRL 290
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTL------QQIDPVAGQVS----ALVLCHTRELAYQICHEF 51
D++ A++G GKTA F + Q ++ G + A++L TRELA QI E
Sbjct: 190 DLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEA 249
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
++FS + +KV V YGG I L+ C I+V TPGR+
Sbjct: 250 KKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPGRL 290
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTL------QQIDPVAGQVS----ALVLCHTRELAYQICHEF 51
D++ A++G GKTA F + Q ++ G + A++L TRELA QI E
Sbjct: 190 DLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEA 249
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
++FS + +KV V YGG I L+ C I+V TPGR+
Sbjct: 250 KKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPGRL 290
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---PV-AGQVS-ALVLCHTRELAYQICHEFERFSK 56
D I AK+G GKT FVL L+ I PV AG LV+ TREL QI + +FSK
Sbjct: 568 DCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSK 627
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
L ++ YGG + LK IVV TPGR++
Sbjct: 628 PL-GIRCVPVYGGSGVAQQISELKRGT-EIVVCTPGRMI 664
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---PV-AGQVS-ALVLCHTRELAYQICHEFERFSK 56
D I AK+G GKT FVL L+ I PV AG LV+ TREL QI + +FSK
Sbjct: 230 DCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSK 289
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 97
L ++ YGG + LK IVV TPGR++ +
Sbjct: 290 PL-GIRCVPVYGGSGVAQQISELKRGT-EIVVCTPGRMIDI 328