Miyakogusa Predicted Gene

Lj5g3v0539540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0539540.1 Non Chatacterized Hit- tr|B9FU25|B9FU25_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.71,0.0002,TPX2,Xklp2 targeting protein; seg,NULL;
coiled-coil,NULL; FAMILY NOT
NAMED,NULL,gene.Ljchr5_pseudomol_20120830.path1.gene1220.1
         (406 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32330.2 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   201   7e-52
AT4G32330.3 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   201   9e-52
AT4G32330.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   201   9e-52
AT2G25480.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   187   2e-47
AT2G35880.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   152   4e-37
AT3G23090.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   117   1e-26
AT3G23090.2 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   116   3e-26
AT5G28646.2 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)...   110   1e-24
AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)...   110   1e-24
AT3G04630.3 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...   110   2e-24
AT3G04630.2 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...   110   2e-24
AT3G04630.1 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652...   110   2e-24
AT1G54460.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...   102   4e-22
AT1G70950.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    99   4e-21

>AT4G32330.2 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr4:15609801-15611867 FORWARD
           LENGTH=436
          Length = 436

 Score =  201 bits (511), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/255 (47%), Positives = 157/255 (61%), Gaps = 32/255 (12%)

Query: 119 SSSGVHASLTKRSKNGKDKQPSSAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKLLQSFQ 178
           ++S VH    K+SK GK      A SN ++A + +    +K + FN R+   A++ +  +
Sbjct: 99  NNSSVH---IKKSKEGKSADAKVAASNGSVAPNVQTTNPLKSKSFNGRE---AQVTKQGK 152

Query: 179 HSS----TSDG----------ASSEVTTGDTE-------DAKPRRLGTLPDYGFSFKCGE 217
           H S    ++DG           + E +  DT+       D KPR++G LP+YGFSFKC +
Sbjct: 153 HDSAPAESADGEKVKPKSQKKQAHETSEDDTQSSNPKADDGKPRKVGALPNYGFSFKCDQ 212

Query: 218 RAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQEPP 277
           RAE+RKEFY KLEEK  AKE E  +MQAKSKETQEAE++MLRKSL FKATPMP+FYQEP 
Sbjct: 213 RAEKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRMLRKSLNFKATPMPSFYQEPQ 272

Query: 278 PTKVELKKIPITRPKSPKLGRKKXXXXXXXXXXXXXXXQQGRLSLDEKVLRSN-LSKGVT 336
           P K ELKKIP TRPKSPKLGRKK               + GRLSLDE+  + N  +KG+ 
Sbjct: 273 PPKTELKKIPPTRPKSPKLGRKK--TASGADSEETQTPRLGRLSLDERASKDNPTAKGIM 330

Query: 337 PV--HHKKPQRRSLP 349
           P     K+P R+SLP
Sbjct: 331 PTVDLKKQPVRKSLP 345


>AT4G32330.3 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr4:15609801-15611867 FORWARD
           LENGTH=437
          Length = 437

 Score =  201 bits (510), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/253 (47%), Positives = 152/253 (60%), Gaps = 27/253 (10%)

Query: 119 SSSGVHASLTKRSKNGKDKQPSSAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKL----- 173
           ++S VH    K+SK GK      A SN ++A + +    +K + FN R++++ K      
Sbjct: 99  NNSSVH---IKKSKEGKSADAKVAASNGSVAPNVQTTNPLKSKSFNGREAQVTKQGKHDS 155

Query: 174 --------------LQSFQHSSTSDGASSEVTTGDTEDAKPRRLGTLPDYGFSFKCGERA 219
                          Q  Q   TS+  +    +   +D KPR++G LP+YGFSFKC +RA
Sbjct: 156 APAESADGEKVKPKSQKKQAHETSEDDTQSSNSPKADDGKPRKVGALPNYGFSFKCDQRA 215

Query: 220 ERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQEPPPT 279
           E+RKEFY KLEEK  AKE E  +MQAKSKETQEAE++MLRKSL FKATPMP+FYQEP P 
Sbjct: 216 EKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRMLRKSLNFKATPMPSFYQEPQPP 275

Query: 280 KVELKKIPITRPKSPKLGRKKXXXXXXXXXXXXXXXQQGRLSLDEKVLRSN-LSKGVTPV 338
           K ELKKIP TRPKSPKLGRKK               + GRLSLDE+  + N  +KG+ P 
Sbjct: 276 KTELKKIPPTRPKSPKLGRKK--TASGADSEETQTPRLGRLSLDERASKDNPTAKGIMPT 333

Query: 339 --HHKKPQRRSLP 349
               K+P R+SLP
Sbjct: 334 VDLKKQPVRKSLP 346


>AT4G32330.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr4:15609801-15611867 FORWARD
           LENGTH=437
          Length = 437

 Score =  201 bits (510), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/253 (47%), Positives = 152/253 (60%), Gaps = 27/253 (10%)

Query: 119 SSSGVHASLTKRSKNGKDKQPSSAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKL----- 173
           ++S VH    K+SK GK      A SN ++A + +    +K + FN R++++ K      
Sbjct: 99  NNSSVH---IKKSKEGKSADAKVAASNGSVAPNVQTTNPLKSKSFNGREAQVTKQGKHDS 155

Query: 174 --------------LQSFQHSSTSDGASSEVTTGDTEDAKPRRLGTLPDYGFSFKCGERA 219
                          Q  Q   TS+  +    +   +D KPR++G LP+YGFSFKC +RA
Sbjct: 156 APAESADGEKVKPKSQKKQAHETSEDDTQSSNSPKADDGKPRKVGALPNYGFSFKCDQRA 215

Query: 220 ERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQEPPPT 279
           E+RKEFY KLEEK  AKE E  +MQAKSKETQEAE++MLRKSL FKATPMP+FYQEP P 
Sbjct: 216 EKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRMLRKSLNFKATPMPSFYQEPQPP 275

Query: 280 KVELKKIPITRPKSPKLGRKKXXXXXXXXXXXXXXXQQGRLSLDEKVLRSN-LSKGVTPV 338
           K ELKKIP TRPKSPKLGRKK               + GRLSLDE+  + N  +KG+ P 
Sbjct: 276 KTELKKIPPTRPKSPKLGRKK--TASGADSEETQTPRLGRLSLDERASKDNPTAKGIMPT 333

Query: 339 --HHKKPQRRSLP 349
               K+P R+SLP
Sbjct: 334 VDLKKQPVRKSLP 346


>AT2G25480.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr2:10843449-10845343 FORWARD
           LENGTH=403
          Length = 403

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/227 (49%), Positives = 138/227 (60%), Gaps = 17/227 (7%)

Query: 143 VSNVTLALDSRPRQSIKGRPFNDRQSEMAKL--LQSFQHSSTSDGAS--------SEVTT 192
            SN ++A + +P +S K +  N R++ + K     S     T D           ++ + 
Sbjct: 99  ASNGSVAPNVKPVKSPKSKSLNGREAHVTKHGNHDSLPAEGTRDKPKLRETRKQVNDTSE 158

Query: 193 GDTE-----DAKPRRLGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKS 247
            DT+     D KPRR   LP+YGFSF+C +RAE+R+EFY+KLEEKI AKE EK  +QAKS
Sbjct: 159 DDTQYPKEDDGKPRRASALPNYGFSFRCDQRAEKRREFYSKLEEKIHAKEEEKNTVQAKS 218

Query: 248 KETQEAEIKMLRKSLTFKATPMPTFYQEPPPTKVELKKIPITRPKSPKLGRKKXXXXXXX 307
           KETQEAE+KMLRKSL FKATPMPTFYQEP   K ELKKI ITRPKSPKLGRKK       
Sbjct: 219 KETQEAELKMLRKSLNFKATPMPTFYQEPQLPKTELKKIAITRPKSPKLGRKKTNSRADS 278

Query: 308 XXXXXXXXQQ-GRLSLDEKVLRSN-LSKGVTPVHHKKPQRRSLPPRL 352
                    + GRLSLDEK  + N + +G  P   KKP  R   PRL
Sbjct: 279 EEAITIQTPRFGRLSLDEKTPKDNPVVEGSVPGETKKPPVRKSLPRL 325


>AT2G35880.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr2:15063204-15065259 REVERSE
           LENGTH=432
          Length = 432

 Score =  152 bits (384), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/100 (76%), Positives = 83/100 (83%), Gaps = 1/100 (1%)

Query: 201 RRLGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRK 260
           RR       GFSF+  ERAE+RKEFY KLEEKI AKE EKTN+QAKSKE+QE EIK LRK
Sbjct: 236 RRSSVGSASGFSFRLEERAEKRKEFYMKLEEKIHAKEVEKTNLQAKSKESQEEEIKRLRK 295

Query: 261 SLTFKATPMPTFYQEPPPTKVELKKIPITRPKSPKLGRKK 300
           SLTFKA PMP+FY+EPPP KVELKKIP TRPKSPKLGR+K
Sbjct: 296 SLTFKAGPMPSFYKEPPP-KVELKKIPTTRPKSPKLGRRK 334


>AT3G23090.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr3:8214533-8216983 REVERSE LENGTH=338
          Length = 338

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 77/113 (68%)

Query: 187 SSEVTTGDTEDAKPRRLGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAK 246
           S  V +  T  AK  +  T+     SF+  ERAE+RKEFYTKLEEK QA EAEKT  +A+
Sbjct: 170 SCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEEKHQAMEAEKTQSEAR 229

Query: 247 SKETQEAEIKMLRKSLTFKATPMPTFYQEPPPTKVELKKIPITRPKSPKLGRK 299
           +KE  EA ++ LRKSL FKA PMP FY E PP KVELKK   TR KSPKLGR+
Sbjct: 230 NKEATEAALRQLRKSLRFKANPMPKFYHEGPPPKVELKKPLPTRAKSPKLGRR 282


>AT3G23090.2 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr3:8214533-8216137 REVERSE LENGTH=338
          Length = 338

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 4/117 (3%)

Query: 187 SSEVTTGDTEDAKPRRLGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAK 246
           S  V +  T  AK  +  T+     SF+  ERAE+RKEFYTKLEEK QA EAEKT  +A+
Sbjct: 166 SCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEEKHQAMEAEKTQSEAR 225

Query: 247 SKETQEAEIKMLRKSLTFKATPMPTFYQEPPPTKVELKKI---PI-TRPKSPKLGRK 299
           +KE  EA ++ LRKSL FKA PMP FY E PP KVELKK+   P+ TR KSPKLGR+
Sbjct: 226 NKEATEAALRQLRKSLRFKANPMPKFYHEGPPPKVELKKVTHKPLPTRAKSPKLGRR 282


>AT5G28646.2 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)
           protein family | chr5:10675192-10676151 FORWARD
           LENGTH=202
          Length = 202

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 4/94 (4%)

Query: 204 GTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLT 263
           GT P     F+  +RAE+RKE+Y KLEEK QA EAE+  ++ + KE QEA IK LRK+L 
Sbjct: 84  GTAP----RFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLK 139

Query: 264 FKATPMPTFYQEPPPTKVELKKIPITRPKSPKLG 297
           FKA P+P FY + PP K ELKK P+TRPKSPKL 
Sbjct: 140 FKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLN 173


>AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2)
           protein family | chr5:10675192-10676151 FORWARD
           LENGTH=202
          Length = 202

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 4/94 (4%)

Query: 204 GTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLT 263
           GT P     F+  +RAE+RKE+Y KLEEK QA EAE+  ++ + KE QEA IK LRK+L 
Sbjct: 84  GTAP----RFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLK 139

Query: 264 FKATPMPTFYQEPPPTKVELKKIPITRPKSPKLG 297
           FKA P+P FY + PP K ELKK P+TRPKSPKL 
Sbjct: 140 FKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLN 173


>AT3G04630.3 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=286
          Length = 286

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 2/90 (2%)

Query: 209 YGFS--FKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKA 266
           YG +  F+  +RAE+RKE+Y KLEEK QA EAE+  ++ + K+ QEA +K LRK+L FKA
Sbjct: 122 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 181

Query: 267 TPMPTFYQEPPPTKVELKKIPITRPKSPKL 296
            P+P FY E PP K ELKK+P+TRPKSPKL
Sbjct: 182 KPVPNFYYEAPPAKPELKKLPLTRPKSPKL 211


>AT3G04630.2 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=286
          Length = 286

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 2/90 (2%)

Query: 209 YGFS--FKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKA 266
           YG +  F+  +RAE+RKE+Y KLEEK QA EAE+  ++ + K+ QEA +K LRK+L FKA
Sbjct: 122 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 181

Query: 267 TPMPTFYQEPPPTKVELKKIPITRPKSPKL 296
            P+P FY E PP K ELKK+P+TRPKSPKL
Sbjct: 182 KPVPNFYYEAPPAKPELKKLPLTRPKSPKL 211


>AT3G04630.1 | Symbols: WDL1 | WVD2-like 1 | chr3:1259231-1260652
           FORWARD LENGTH=287
          Length = 287

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 2/90 (2%)

Query: 209 YGFS--FKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKA 266
           YG +  F+  +RAE+RKE+Y KLEEK QA EAE+  ++ + K+ QEA +K LRK+L FKA
Sbjct: 123 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 182

Query: 267 TPMPTFYQEPPPTKVELKKIPITRPKSPKL 296
            P+P FY E PP K ELKK+P+TRPKSPKL
Sbjct: 183 KPVPNFYYEAPPAKPELKKLPLTRPKSPKL 212


>AT1G54460.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr1:20340907-20342900 REVERSE
           LENGTH=338
          Length = 338

 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 4/98 (4%)

Query: 203 LGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSL 262
           +G  P    +F    R ERR+EFY KLEEK +A EAEK   + + KE QEA  K LRK++
Sbjct: 161 IGVAP----TFSSTSRLERRREFYQKLEEKQKALEAEKRENEKRLKEEQEAVTKQLRKNM 216

Query: 263 TFKATPMPTFYQEPPPTKVELKKIPITRPKSPKLGRKK 300
            +KA P+P+FYQE PP K  LKK P+TRPKSP L R+K
Sbjct: 217 AYKANPVPSFYQEGPPPKQPLKKFPLTRPKSPNLNRRK 254


>AT1G70950.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr1:26752779-26755242 FORWARD
           LENGTH=478
          Length = 478

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 29/162 (17%)

Query: 127 LTKRSKNGKDKQP---------SSAVSNVTLALDS------RPRQSIKGRPFNDRQSEMA 171
           +TK S  G D  P         SS  SN    +D+      RP+++I+ +P +  ++E  
Sbjct: 243 VTKASTKGHDVTPKAASRRTKGSSLSSNSKTNVDAKSQKELRPKKTIESQPKSSNKTETR 302

Query: 172 KLLQSFQHSSTSDGASSEVTTGDTEDAKPRRLGTLPDYGFSFKCGERAERRKEFYTKLEE 231
             + + +  +++  +  E++TG T               F FKC ERAE+RKEFY KLEE
Sbjct: 303 PPIATNRCKTSTTSSKLEMSTGST--------------SFRFKCSERAEKRKEFYMKLEE 348

Query: 232 KIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFY 273
           KI AK+ E   +QAK+++  EAEIK  RKSL FKATPMP+FY
Sbjct: 349 KIHAKKTETNQVQAKTQQKAEAEIKQFRKSLNFKATPMPSFY 390