Miyakogusa Predicted Gene

Lj5g3v0529460.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0529460.2 Non Chatacterized Hit- tr|C6TH49|C6TH49_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4 S,63.51,4e-18,no
description,NULL; FAMILY NOT NAMED,NULL; Ubiquitin-like,NULL;
seg,NULL,CUFF.53232.2
         (269 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32270.1 | Symbols:  | Ubiquitin-like superfamily protein | c...   160   8e-40
AT5G25340.1 | Symbols:  | Ubiquitin-like superfamily protein | c...   149   2e-36
AT4G32270.2 | Symbols:  | Ubiquitin-like superfamily protein | c...   139   2e-33
AT1G80060.1 | Symbols:  | Ubiquitin-like superfamily protein | c...   113   2e-25
AT3G07860.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    65   4e-11

>AT4G32270.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr4:15575015-15576360 REVERSE LENGTH=239
          Length = 239

 Score =  160 bits (405), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 90/116 (77%)

Query: 23  FSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFS 82
            S + +ID +  ++SF Y ++P +P +L+VLKLDGSSF IQV KTA++ ELK AVEA FS
Sbjct: 13  LSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKMAVEAAFS 72

Query: 83  HMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNC 138
           H+P  GP KISWPHVWGQFCL Y+ ++L+ E +YL  +GIKDGD+L F+RH+SN C
Sbjct: 73  HLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYC 128


>AT5G25340.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:8793238-8794211 FORWARD LENGTH=208
          Length = 208

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 64/107 (59%), Positives = 84/107 (78%)

Query: 33  FAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPAKI 92
           F +++F Y KLP++P RLSVLKLDGSSFD+ V  +A++ +LK A+E  FSH+P+KGP+KI
Sbjct: 4   FHRRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKI 63

Query: 93  SWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCT 139
           SW HVWG FCLC+ GQKL+T+ D + NYG+KDGDE+ F  HVS N  
Sbjct: 64  SWSHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAV 110


>AT4G32270.2 | Symbols:  | Ubiquitin-like superfamily protein |
           chr4:15575015-15576264 REVERSE LENGTH=204
          Length = 204

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 76/96 (79%), Gaps = 3/96 (3%)

Query: 43  LPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFC 102
           +P +P +L+VLKLDGSSF   V KTA++ ELK AVEA FSH+P  GP KISWPHVWGQFC
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 57

Query: 103 LCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNC 138
           L Y+ ++L+ E +YL  +GIKDGD+L F+RH+SN C
Sbjct: 58  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYC 93


>AT1G80060.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr1:30116302-30117524 REVERSE LENGTH=243
          Length = 243

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 71/97 (73%), Gaps = 1/97 (1%)

Query: 40  YGKLPSQP-FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVW 98
           Y KLP Q   +LSV+KL+GS FD++V+K  S+AELK AVE VF+  P +G   ISW HVW
Sbjct: 44  YLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGMISWSHVW 103

Query: 99  GQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVS 135
           G FCLCY  Q+LV ++  +R  G+ DGD+LHF+RH+S
Sbjct: 104 GHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLS 140


>AT3G07860.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr3:2507895-2508656 FORWARD LENGTH=165
          Length = 165

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 48  FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLCY 105
            RLSV+KLDGSS D+ V  +A++ +LK  ++   + M +   G   ISW HVW  FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 106 DGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
           + +KL+ +   L++ GI++  ++ FM +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140