Miyakogusa Predicted Gene

Lj5g3v0529440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0529440.1 Non Chatacterized Hit- tr|I3S1U1|I3S1U1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,69.28,0,Cyclin_N,Cyclin, N-terminal; no description,Cyclin-like;
domain present in cyclins, TFIIB and Retino,CUFF.53234.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4...   163   6e-41
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547...   160   6e-40
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ...   155   1e-38
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114...   154   4e-38
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137...   140   6e-34
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286...   132   2e-31
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125...   118   2e-27
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951...   118   2e-27
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167...   115   2e-26
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666...   111   3e-25
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169...   110   4e-25
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase...   110   5e-25
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587...   109   1e-24
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172...   108   2e-24
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817...   106   9e-24
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173...   100   6e-22
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy...   100   7e-22
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ...    99   1e-21
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302...    99   1e-21
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365...    99   2e-21
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173...    96   1e-20
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173...    92   2e-19
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase...    86   2e-17
AT1G20590.1 | Symbols:  | Cyclin family protein | chr1:7131166-7...    56   2e-08

>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
           chr4:17622129-17624208 REVERSE LENGTH=428
          Length = 428

 Score =  163 bits (413), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/155 (55%), Positives = 117/155 (75%), Gaps = 6/155 (3%)

Query: 45  QKKPNEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRA 104
           +KK  E+IVD ID+ADV N+LAAVEY++DIY FYK+VE+E RP   YM SQP+I + MR 
Sbjct: 141 EKKQKEKIVD-IDSADVENDLAAVEYVEDIYSFYKSVESEWRP-RDYMASQPDINEKMRL 198

Query: 105 MLVDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYEN 164
           +LV+W+I+VHV   RF  + ET YLT+NI+DRFLS+  VP+++LQLVG++A+LM++KYE 
Sbjct: 199 ILVEWLIDVHV---RFELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYE- 254

Query: 165 NSLAPEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
               P+V+    ++D  YS +QIL MEK IL  LE
Sbjct: 255 EIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLE 289


>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
           chr3:3625475-3627139 REVERSE LENGTH=414
          Length = 414

 Score =  160 bits (404), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 110/145 (75%), Gaps = 5/145 (3%)

Query: 55  NIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDWVIEVH 114
           +ID  D  N+LAAVEY++D+Y FYK V NES+P   YM +QPEI + MR++L+DW++EVH
Sbjct: 144 DIDYVDKENDLAAVEYVEDMYIFYKEVVNESKPQ-MYMHTQPEIDEKMRSILIDWLVEVH 202

Query: 115 VHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYF 174
           V   +F  S ETLYLT+NI+DRFLSL TVP+R+LQLVG++A+L+ASKYE     P+V+  
Sbjct: 203 V---KFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYE-EIWPPQVNDL 258

Query: 175 AFLSDRTYSPEQILSMEKIILRILE 199
            +++D +Y+  QIL MEK IL  LE
Sbjct: 259 VYVTDNSYNSRQILVMEKTILGNLE 283


>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
           chr5:1859542-1861570 REVERSE LENGTH=445
          Length = 445

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 109/151 (72%), Gaps = 5/151 (3%)

Query: 49  NEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVD 108
           N+  + +ID +D  N LAAVEY+ D+Y FYK VE ES+P   YM  Q E+ + MRA+L+D
Sbjct: 161 NKPKIIDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQPK-MYMHIQTEMNEKMRAILID 219

Query: 109 WVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLA 168
           W++EVH+   +F  ++ETLYLT+NI+DRFLS+  VPKR+LQLVGI+A+L+ASKYE     
Sbjct: 220 WLLEVHI---KFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYE-EIWP 275

Query: 169 PEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
           P+V+   +++D  YS  QIL MEK IL  LE
Sbjct: 276 PQVNDLVYVTDNAYSSRQILVMEKAILGNLE 306


>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
           chr2:11401551-11403205 FORWARD LENGTH=387
          Length = 387

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 49/230 (21%)

Query: 14  RNRIILGDIGNGRTLREVDINTNFCHQPLATQKKPNEQI--------------------- 52
           +NR +LGDIGN  T R+V    +   +    Q++   ++                     
Sbjct: 30  QNRKVLGDIGNLVTGRDVATGKDVAKKAKQPQQQTKAEVIVISPDENEKCKPHFSRRTHI 89

Query: 53  -----------------------VDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDA 89
                                  V +IDA D +NELAAVEY++DI+KFY+TVE E     
Sbjct: 90  RGTKTFTATLRARSKAASGLKDAVIDIDAVDANNELAAVEYVEDIFKFYRTVEEEGGIK- 148

Query: 90  TYMDSQPEITQTMRAMLVDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQ 149
            Y+ SQPEI + MR++L+DW+++VH    +F    ETLYLTIN+VDRFLSL  V +R+LQ
Sbjct: 149 DYIGSQPEINEKMRSILIDWLVDVH---RKFELMPETLYLTINLVDRFLSLTMVHRRELQ 205

Query: 150 LVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
           L+G+ AML+A KYE    APEV+ F  +SD  Y+ +Q+L+MEK IL  +E
Sbjct: 206 LLGLGAMLIACKYE-EIWAPEVNDFVCISDNAYNRKQVLAMEKSILGQVE 254


>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
           REVERSE LENGTH=429
          Length = 429

 Score =  140 bits (353), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 104/153 (67%), Gaps = 5/153 (3%)

Query: 47  KPNEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAML 106
           K  E ++D IDA D +N LAAVEYI D++ FYK  E  S     YMD+Q ++ + MR +L
Sbjct: 155 KEEEPVID-IDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGIL 213

Query: 107 VDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNS 166
           +DW+IEVH    +F    ETLYLTIN++DRFL++  + ++KLQLVG+TA+L+A KYE  S
Sbjct: 214 IDWLIEVHY---KFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVS 270

Query: 167 LAPEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
           + P VD    +SD+ YS  ++L MEK++   L+
Sbjct: 271 V-PVVDDLILISDKAYSRREVLDMEKLMANTLQ 302


>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
           chr1:28628046-28630199 REVERSE LENGTH=431
          Length = 431

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 5/151 (3%)

Query: 50  EQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDW 109
           E+ V +ID+ D +N L+ VEYI DIY FYK  E  S     YM++Q +I + MR +L DW
Sbjct: 157 EESVMDIDSCDKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDW 216

Query: 110 VIEVHVHMTRFHFSIETLYLTINIVDRFLSLVT-VPKRKLQLVGITAMLMASKYENNSLA 168
           +IEVH    +F    ETLYLTIN++DRFL++   + ++KLQLVG+TAML+A KYE  S+ 
Sbjct: 217 LIEVHY---KFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSV- 272

Query: 169 PEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
           P VD    +SD+ Y+  +IL MEK++   L+
Sbjct: 273 PVVDDLILISDKAYTRTEILDMEKLMANTLQ 303


>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
           chr1:12595110-12599354 FORWARD LENGTH=483
          Length = 483

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 25/151 (16%)

Query: 49  NEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVD 108
           N+  + +ID +D  N +AAVEY+ D+Y FYK VE ES+P   YM  Q E+ + MRA+L+D
Sbjct: 248 NKPKILDIDESDKDNHVAAVEYVDDMYSFYKEVEKESQPK-MYMHIQTEMNEKMRAILID 306

Query: 109 WVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLA 168
           W++EVH+   +F  ++ETLYLT+NI+DRFL +  VPKR+LQ                   
Sbjct: 307 WLLEVHI---KFELNLETLYLTVNIIDRFLYVKAVPKRELQ------------------- 344

Query: 169 PEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
             V+   +++D  YS  QIL M+K IL  LE
Sbjct: 345 --VNDLVYVTDNAYSSRQILVMKKAILGNLE 373


>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
           chr1:12595110-12599628 FORWARD LENGTH=491
          Length = 491

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 25/151 (16%)

Query: 49  NEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVD 108
           N+  + +ID +D  N +AAVEY+ D+Y FYK VE ES+P   YM  Q E+ + MRA+L+D
Sbjct: 251 NKPKILDIDESDKDNHVAAVEYVDDMYSFYKEVEKESQPK-MYMHIQTEMNEKMRAILID 309

Query: 109 WVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLA 168
           W++EVH+   +F  ++ETLYLT+NI+DRFL +  VPKR+LQ                   
Sbjct: 310 WLLEVHI---KFELNLETLYLTVNIIDRFLYVKAVPKRELQ------------------- 347

Query: 169 PEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
             V+   +++D  YS  QIL M+K IL  LE
Sbjct: 348 --VNDLVYVTDNAYSSRQILVMKKAILGNLE 376


>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
           chr1:16775035-16777182 REVERSE LENGTH=460
          Length = 460

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 103/166 (62%), Gaps = 7/166 (4%)

Query: 36  NFCHQP-LATQKKPNEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDS 94
           N+C +  L+  KK ++  + NID+ +   +L A  +  DIYK  +  E + RPD  YM+ 
Sbjct: 160 NYCSRDVLSDMKKMDKNQIVNIDSNNGDPQLCAT-FACDIYKHLRASEAKKRPDVDYMER 218

Query: 95  -QPEITQTMRAMLVDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGI 153
            Q ++  +MR +LVDW+IEV      +    ETLYLT+N +DR+LS   + ++KLQL+G+
Sbjct: 219 VQKDVNSSMRGILVDWLIEVS---EEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGV 275

Query: 154 TAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
             M++A+KYE    AP+V+ F +++D TY  +++L ME  +L  L+
Sbjct: 276 ACMMIAAKYE-EICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLK 320


>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
           FORWARD LENGTH=429
          Length = 429

 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 5/150 (3%)

Query: 50  EQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDW 109
           E IVD ID  D  N LAAVEY+QD+Y FY+T+E  S     YM  Q ++ + MRA+L+DW
Sbjct: 152 EPIVD-IDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKMRAILIDW 210

Query: 110 VIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAP 169
           +IEVH    +F    ETL+LT+N++DRFLS   V ++KLQLVG+ A+L+A KYE  S+ P
Sbjct: 211 LIEVH---DKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSV-P 266

Query: 170 EVDYFAFLSDRTYSPEQILSMEKIILRILE 199
            V+    +SD+ Y+   +L MEK +L  L+
Sbjct: 267 VVEDLVLISDKAYTRNDVLEMEKTMLSTLQ 296


>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
           chr4:16901744-16903766 FORWARD LENGTH=429
          Length = 429

 Score =  110 bits (276), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 4/145 (2%)

Query: 55  NIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDWVIEVH 114
           +ID  D +N LAAVEY+QD+Y FY+  E  S     YM  Q +I+  MRA+L+DW+IEVH
Sbjct: 157 DIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDKMRAILIDWLIEVH 216

Query: 115 VHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYF 174
               +F    ETL+LT+N++DRFLS   V ++KLQLVG+ A+L+A KYE  S+ P V+  
Sbjct: 217 ---DKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEEVSV-PIVEDL 272

Query: 175 AFLSDRTYSPEQILSMEKIILRILE 199
             +SD+ Y+   +L MEKI+L  L+
Sbjct: 273 VVISDKAYTRTDVLEMEKIMLSTLQ 297


>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
           3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
          Length = 372

 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 91/133 (68%), Gaps = 7/133 (5%)

Query: 70  YIQDIYKFYKTVE--NESRPDATYMDS-QPEITQTMRAMLVDWVIEVHVHMTRFHFSIET 126
           Y+ DIY++ + +E   + RP   Y++  Q ++T +MR +LVDW++EV      +    ET
Sbjct: 102 YVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEV---AEEYKLGSET 158

Query: 127 LYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQ 186
           LYLT++ +DRFLSL TV K+KLQLVG++AML+ASKYE  S  P+VD F +++D T+S + 
Sbjct: 159 LYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEIS-PPKVDDFCYITDNTFSKQD 217

Query: 187 ILSMEKIILRILE 199
           ++ ME  IL  L+
Sbjct: 218 VVKMEADILLALQ 230


>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
           REVERSE LENGTH=648
          Length = 648

 Score =  109 bits (273), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/140 (40%), Positives = 89/140 (63%), Gaps = 4/140 (2%)

Query: 60  DVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDWVIEVHVHMTR 119
           D  N+L   EY+ DIY+FY T E  +     Y+ +  E++   R +L++W+IEVH     
Sbjct: 385 DESNQLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWLIEVHFKFDL 444

Query: 120 FHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSD 179
            H   ETLYLT++++DR+LS V + K ++QL+G+TA+L+ASKYE +   P +     +S 
Sbjct: 445 MH---ETLYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYE-DYWHPRIKDLISISA 500

Query: 180 RTYSPEQILSMEKIILRILE 199
            +Y+ EQIL ME+ +L+ L+
Sbjct: 501 ESYTREQILGMERSMLKQLK 520


>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
           chr5:17293227-17294789 FORWARD LENGTH=355
          Length = 355

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 19/193 (9%)

Query: 14  RNRIILGDIGNGRTLREVDINTNFCHQPLATQKKPN------EQIVDNIDAADVHNELAA 67
           + R++LG++ N   +++         +    QKK +      E +  +ID      ++  
Sbjct: 33  KKRVVLGELPNLSNIKK-------SRKATTKQKKKSVSIPTIETLNSDIDTRSDDPQMCG 85

Query: 68  VEYIQDIYKFYKTVENESRPDATYMDS-QPEITQTMRAMLVDWVIEVHVHMTRFHFSIET 126
             Y+  I+++ + +E +SRP   Y++  Q ++T  MR +LVDW++EV      +    +T
Sbjct: 86  -PYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEV---AEEYKLLSDT 141

Query: 127 LYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQ 186
           LYL ++ +DRFLSL TV K++LQL+G+T+ML+ASKYE  +  P VD F +++D TY+ ++
Sbjct: 142 LYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEIT-PPNVDDFCYITDNTYTKQE 200

Query: 187 ILSMEKIILRILE 199
           I+ ME  IL  L+
Sbjct: 201 IVKMEADILLALQ 213


>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
           FORWARD LENGTH=437
          Length = 437

 Score =  106 bits (265), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 7/149 (4%)

Query: 51  QIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYM-DSQPEITQTMRAMLVDW 109
           QIVD ID+     +  ++ Y   IY      E E RP  +YM   Q +I  TMR +L+DW
Sbjct: 156 QIVD-IDSGVQDPQFCSL-YAASIYDSINVAELEQRPSTSYMVQVQRDIDPTMRGILIDW 213

Query: 110 VIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAP 169
           ++EV      +    +TLYLT+N++DRF+S   + K+KLQL+GIT ML+ASKYE  S AP
Sbjct: 214 LVEVS---EEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEIS-AP 269

Query: 170 EVDYFAFLSDRTYSPEQILSMEKIILRIL 198
            ++ F F++D TY+  ++LSME  +L  L
Sbjct: 270 RLEEFCFITDNTYTRLEVLSMEIKVLNSL 298


>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
           chr1:17303676-17305197 FORWARD LENGTH=327
          Length = 327

 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 10/164 (6%)

Query: 39  HQPLATQKKPNEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENES--RPDATYMDS-Q 95
           H+ LA Q+  N Q   +IDA     ++  + Y+ DIY++ + +E +   RP   Y++  Q
Sbjct: 28  HKLLAFQE--NIQSGSDIDARSDDPQMCGL-YVSDIYEYLRELEVKPKLRPLHDYIEKIQ 84

Query: 96  PEITQTMRAMLVDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITA 155
            +IT + R +LVDW++EV      F    ETLYLT++ +DRFLSL  V +  LQLVG++A
Sbjct: 85  EDITPSKRGVLVDWLVEV---AEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSA 141

Query: 156 MLMASKYENNSLAPEVDYFAFLSDRTYSPEQILSMEKIILRILE 199
           M +ASKYE     P+V+ F +++  TY+ + +L ME+ IL  LE
Sbjct: 142 MFIASKYEEKR-RPKVEDFCYITANTYTKQDVLKMEEDILLALE 184


>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
           cyclin 3B from Arabidopsis | chr5:3601811-3604466
           REVERSE LENGTH=436
          Length = 436

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 112/197 (56%), Gaps = 11/197 (5%)

Query: 5   NIIVPTKEERNRIILGDIGNGRTLREVDIN-TNFCHQPLATQKKPNEQIVDNIDAADVHN 63
           +I+V    E++++   D+   R     D++ +NF  + +  Q++    +++ +   D+ +
Sbjct: 103 DILVDMHTEKSKLA-EDLSKIRMAEAQDVSLSNFKDEEITEQQEDGSGVMELLQVVDIDS 161

Query: 64  EL----AAVEYIQDIYKFYKTVENESRPDATYMD-SQPEITQTMRAMLVDWVIEVHVHMT 118
            +        Y  DIY      E + RP A YM+  Q +I   MR +L+DW++EV     
Sbjct: 162 NVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWLVEVS---D 218

Query: 119 RFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLS 178
            +    +TLYLT+N++DRFLS   + +++LQL+G++ ML+ASKYE  S AP V+ F F++
Sbjct: 219 DYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASKYEELS-APGVEEFCFIT 277

Query: 179 DRTYSPEQILSMEKIIL 195
             TY+  ++LSME  IL
Sbjct: 278 ANTYTRPEVLSMEIQIL 294


>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
           chr1:29081904-29084137 REVERSE LENGTH=442
          Length = 442

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 6/146 (4%)

Query: 55  NIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMD-SQPEITQTMRAMLVDWVIEV 113
           NID+  +  +L A  +  DIY+  +  E   RP   YM+ +Q  I  +MR++L+DW++EV
Sbjct: 164 NIDSDLMDPQLCA-SFACDIYEHLRVSEVNKRPALDYMERTQSSINASMRSILIDWLVEV 222

Query: 114 HVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDY 173
                 +  S ETLYL +N VDR+L+   + K+ LQL+G+T M++A+KYE     P+V+ 
Sbjct: 223 ---AEEYRLSPETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIAAKYE-EVCVPQVED 278

Query: 174 FAFLSDRTYSPEQILSMEKIILRILE 199
           F +++D TY   ++L ME  +L  L+
Sbjct: 279 FCYITDNTYLRNELLEMESSVLNYLK 304


>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
           chr1:30214694-30216861 FORWARD LENGTH=461
          Length = 461

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 55  NIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMD-SQPEITQTMRAMLVDWVIEV 113
           +ID+ D    L ++ Y  DIY   +  E + RP   +M+ +Q ++T+TMR +LVDW++EV
Sbjct: 183 DIDSDDKDPLLCSL-YAPDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEV 241

Query: 114 HVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDY 173
               T      +TLYLT+ ++D FL    V +++LQL+GIT ML+ASKYE    AP ++ 
Sbjct: 242 SEEYT---LVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYEEIH-APRIEE 297

Query: 174 FAFLSDRTYSPEQILSMEKIILR 196
           F F++D TY+ +Q+L ME  +L+
Sbjct: 298 FCFITDNTYTRDQVLEMESQVLK 320


>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
           FORWARD LENGTH=450
          Length = 450

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 55  NIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDS-QPEITQTMRAMLVDWVIEV 113
           +ID+ D  + L    Y  +I+   +  E + RP   +M+  Q ++TQ+MR +LVDW++EV
Sbjct: 174 DIDSDD-KDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEV 232

Query: 114 HVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDY 173
               T    + +TLYLT+ ++D FL    V +++LQL+GIT ML+ASKYE  S AP ++ 
Sbjct: 233 SEEYT---LASDTLYLTVYLIDWFLHGNYVQRQQLQLLGITCMLIASKYEEIS-APRIEE 288

Query: 174 FAFLSDRTYSPEQILSMEKIILR 196
           F F++D TY+ +Q+L ME  +L+
Sbjct: 289 FCFITDNTYTRDQVLEMENQVLK 311


>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
           chr1:17306752-17308587 FORWARD LENGTH=369
          Length = 369

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 88/133 (66%), Gaps = 7/133 (5%)

Query: 70  YIQDIYKFYKTVENES--RPDATYMDS-QPEITQTMRAMLVDWVIEVHVHMTRFHFSIET 126
           +  DI  + + +E +   RP   Y++  Q ++T  MRA+LVDW++EV      +    +T
Sbjct: 95  FASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEV---AEEYKLVSDT 151

Query: 127 LYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQ 186
           LYLTI+ VDRFLS+  + ++KLQLVG++AML+ASKYE     P+V+ F +++D T++ ++
Sbjct: 152 LYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEEIG-PPKVEDFCYITDNTFTKQE 210

Query: 187 ILSMEKIILRILE 199
           ++SME  IL  L+
Sbjct: 211 VVSMEADILLALQ 223


>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
           chr1:17306752-17308587 FORWARD LENGTH=370
          Length = 370

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 86/133 (64%), Gaps = 6/133 (4%)

Query: 70  YIQDIYKFYKTVENES--RPDATYMDS-QPEITQTMRAMLVDWVIEVHVHMTRFHFSIET 126
           +  DI  + + +E +   RP   Y++  Q ++T  MRA+LVDW++EV      +    +T
Sbjct: 95  FASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEV---AEEYKLVSDT 151

Query: 127 LYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQ 186
           LYLTI+ VDRFLS+  + ++KLQLVG++AML+AS+       P+V+ F +++D T++ ++
Sbjct: 152 LYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQE 211

Query: 187 ILSMEKIILRILE 199
           ++SME  IL  L+
Sbjct: 212 VVSMEADILLALQ 224


>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
           3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
          Length = 192

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 66/94 (70%), Gaps = 6/94 (6%)

Query: 70  YIQDIYKFYKTVE--NESRPDATYMDS-QPEITQTMRAMLVDWVIEVHVHMTRFHFSIET 126
           Y+ DIY++ + +E   + RP   Y++  Q ++T +MR +LVDW++EV      +    ET
Sbjct: 102 YVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVA---EEYKLGSET 158

Query: 127 LYLTINIVDRFLSLVTVPKRKLQLVGITAMLMAS 160
           LYLT++ +DRFLSL TV K+KLQLVG++AML+AS
Sbjct: 159 LYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192


>AT1G20590.1 | Symbols:  | Cyclin family protein |
           chr1:7131166-7132183 REVERSE LENGTH=199
          Length = 199

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)

Query: 137 FLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEVDYFAFLSDRTYSPEQILSMEKIILR 196
           FL++  + ++KLQLVG+TA+L+A KYE  S+ P VD    +SD+ YS  ++L MEK++  
Sbjct: 3   FLAVHQIVRKKLQLVGVTALLLACKYEEVSV-PVVDDLILISDKAYSRREVLDMEKLMAN 61

Query: 197 ILE 199
            L+
Sbjct: 62  TLQ 64