Miyakogusa Predicted Gene

Lj5g3v0529230.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0529230.1 Non Chatacterized Hit- tr|I3S903|I3S903_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.78,0,SUBFAMILY
NOT NAMED,NULL; SOLUTE CARRIER FAMILY 35, MEMBER F5,NULL;
EamA,Drug/metabolite transporter,CUFF.53235.1
         (331 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32140.1 | Symbols:  | EamA-like transporter family | chr4:15...   401   e-112
AT3G07080.1 | Symbols:  | EamA-like transporter family | chr3:22...    68   1e-11

>AT4G32140.1 | Symbols:  | EamA-like transporter family |
           chr4:15523037-15525195 REVERSE LENGTH=394
          Length = 394

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/334 (61%), Positives = 244/334 (73%), Gaps = 7/334 (2%)

Query: 1   MGWRYRAGLFLIATVVIIWVSSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60
           MGWRY+AGLFLI TVVIIWV+SAEVTQDIF  YKQPFAVTYLGASLM+VYLP+AF+KDWL
Sbjct: 1   MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query: 61  CNLLKHRSSKSGKNAESGDEFSVRIGSPFKGNEAQRSFEVELGNIIRKDSDLDLSTLS-- 118
           C  L  RSSKS K     D+ SV +GSP +    +   +   G I +KDS+  LS+    
Sbjct: 61  CRYLDRRSSKSNKIPALTDDSSVELGSPLRHKIIEMGLQ---GTITKKDSEEHLSSHEEE 117

Query: 119 EVKPLVVRYND-TNLPKEEKALTAKEIATYGFYIAPIWFITEYLSNAALARXXXXXXXXX 177
           + +PL+ +  +     K+ K +T K+IA YG Y+APIWF+TEYLSNAALAR         
Sbjct: 118 DERPLIGKVREEVQTLKQRKEITTKQIAMYGLYLAPIWFVTEYLSNAALARTSVASTTVL 177

Query: 178 XXXXXXXXXXIGVLMGQDSLXXXXXXXXXXXXXXXXXTTMGKTWAADDSKFSSS-NGQRS 236
                     IGV +GQD+L                 TT+GKTWA+D+S+ +SS NG+RS
Sbjct: 178 SSTSGLFTLFIGVFLGQDTLNLSKVVAVFVSMAGVVMTTLGKTWASDESQLNSSLNGERS 237

Query: 237 LVGDLFGLLSAVSYGLFTVLLKKFSGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALG 296
           L+GDLFGLLSAVSYGLFTVLLKKF+GEEGE VDVQKLFGY+GLFTLVALWWL+WPL+ALG
Sbjct: 238 LMGDLFGLLSAVSYGLFTVLLKKFAGEEGEGVDVQKLFGYIGLFTLVALWWLVWPLTALG 297

Query: 297 IEPKFTIPHSARVDEVVLANGFIGSVLSDYFWYM 330
           IEPKFTIPHS +VDEVVLANGFIGSVLSDYFW +
Sbjct: 298 IEPKFTIPHSVKVDEVVLANGFIGSVLSDYFWAL 331


>AT3G07080.1 | Symbols:  | EamA-like transporter family |
           chr3:2241360-2242934 FORWARD LENGTH=438
          Length = 438

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 144/348 (41%), Gaps = 32/348 (9%)

Query: 3   WRYRAGLFLIATVVIIWVSSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPI----AFIKD 58
           WR+  GL  +  V  IW++++ V Q +      PF +T++  SL VVYLP+     +++D
Sbjct: 6   WRWVLGLIYLFAVATIWIAASFVVQSVVEAGVSPFLITFICNSLFVVYLPLFEIGRYLED 65

Query: 59  WLCNLLKHRSSKSGKNAESGDEFSVRIGSPFKGNEAQ---------RSFEV-ELGNIIR- 107
              +LL  RS +S        E +V +G    G ++          R  E+ E GN I  
Sbjct: 66  AYGSLLFWRSKRSHLMELVESEKAVLLGKDVSGVKSDATESSGLVVREQEISEGGNGIES 125

Query: 108 --KDSDLDLSTLSEVKPLVVRYNDTNLPKEEKALTAKEIATYGFYIAPIWFITEYLSNAA 165
             ++ +L++     V       ++  L  E+   T   +A     I P WF+ +   N +
Sbjct: 126 GLENIELEIDASVNVSDGASGVSNKGL-DEKGRWTRMRVAKVSLVICPFWFLAQLTFNVS 184

Query: 166 LARXXXXXXXXXXXXXXXXXXXIGVLMGQDSLXXXXXXXXXXXXXXXXXTTMGKTWAADD 225
           L                     + ++   +                    +MG     D 
Sbjct: 185 LKYTTVTSNTILSSASSLFTFLVSLIFLGEKFTWLKLFSVLLCMSGTIIVSMG-----DS 239

Query: 226 SKFSSSNGQRSLVGDLFGLLSAVSYGLFTVLLKKFSGEEGE---RVDVQKLFGYVGLFTL 282
              S++  +  L+GD+  L+SA  Y ++  L++K   ++ E   RV + +  G++GLF  
Sbjct: 240 ESKSNAVAKNPLLGDILSLVSAALYAVYITLIRKKLPDDDERNGRVSMAQFLGFLGLFN- 298

Query: 283 VALWWLIWPLSALGIEPKFTIPHSARVDE--VVLANGFIGSVLSDYFW 328
              +++  P + +    K    ++  + +  +V+  G + +VLSDY W
Sbjct: 299 ---FFIFLPPALILNFTKRERFNALTLKQFGLVVGKGLLDNVLSDYLW 343