Miyakogusa Predicted Gene

Lj5g3v0528880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0528880.2 Non Chatacterized Hit- tr|F6H3V1|F6H3V1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,79.63,0,seg,NULL; GB DEF: HYPOTHETICAL PROTEIN T5K6_30,NULL;
FAMILY NOT NAMED,NULL; TRAPPC9-Trs120,TRAPP II ,CUFF.53331.2
         (1200 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11040.1 | Symbols: TRS120, AtTRS120 | TRS120 | chr5:3495332-...  1810   0.0  

>AT5G11040.1 | Symbols: TRS120, AtTRS120 | TRS120 |
            chr5:3495332-3500610 FORWARD LENGTH=1186
          Length = 1186

 Score = 1810 bits (4689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 891/1204 (74%), Positives = 1015/1204 (84%), Gaps = 23/1204 (1%)

Query: 1    MEPEVSIEGSSVIQVAVVPIGTVPPNMLRDYYSMLLPLHSIPLSAISSFYTEHQKSPFAN 60
            MEP+VSIE  S+I++AV+PIGT+PP +LRDY+SMLL  H+I LSAISSFYTEHQKSPF N
Sbjct: 1    MEPDVSIETLSIIRIAVLPIGTIPPTLLRDYHSMLLRHHTIALSAISSFYTEHQKSPFTN 60

Query: 61   QPWDTGSLSFKFVLGGAPPSPWEDFQSYRKTLAVVGIVHCPSSPDLDAVVDQFASACKSY 120
            QPWD+GSL FKFVLGG+PPSPWEDFQS RK LAV+G+ HCPSSPDLD+V ++F  ACKSY
Sbjct: 61   QPWDSGSLRFKFVLGGSPPSPWEDFQSNRKMLAVIGLCHCPSSPDLDSVTEKFNVACKSY 120

Query: 121  PSSLVDRCFAFCPNDSQLDDGSKREGNLRLFPPADRPTLEFHLNTMMQEVAASLLMEFEK 180
             S+LV RCFAF P DSQL+DG K+  NL LFPP+D+ T EFHL TMMQ++AASLLMEFEK
Sbjct: 121  SSALVRRCFAFSPGDSQLEDGDKKGENLILFPPSDKQTQEFHLQTMMQDIAASLLMEFEK 180

Query: 181  WVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYS 240
            WVLQAES+GTILKTPLDSQASL+SEEVIKAKKRRLGRAQKTIGDY LLAGSPVDANAHYS
Sbjct: 181  WVLQAESAGTILKTPLDSQASLNSEEVIKAKKRRLGRAQKTIGDYSLLAGSPVDANAHYS 240

Query: 241  TALELARLTGDYFWYAGALEGSVCALLIDRMGQKDSILEDEVRYRYNSVILNYKKS--QD 298
            TALELARLTGDYFWYAGALEGSVCALL+DRMGQ+D  LEDEVRYRY +VIL+Y+KS  Q+
Sbjct: 241  TALELARLTGDYFWYAGALEGSVCALLVDRMGQRDVALEDEVRYRYTNVILHYRKSFIQE 300

Query: 299  NAQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKCLIDASDRLVLYIEIAR 358
             AQRVSP++FELEATLKLARFLCRRELAKEVVELLT AADGAK LIDASDRL+LY+E+AR
Sbjct: 301  IAQRVSPLSFELEATLKLARFLCRRELAKEVVELLTNAADGAKSLIDASDRLILYVEVAR 360

Query: 359  LYGSLGYQRKAAFFSRQVAQLYLQQDNRLAAISAMQVLAMTTKAYHVQSRSSISDHSMHN 418
            L+G+LGYQRKAAFF RQVAQLYLQQDNRLAAISAMQVL+MTT AY +QSR+S+S  S++N
Sbjct: 361  LFGALGYQRKAAFFCRQVAQLYLQQDNRLAAISAMQVLSMTTDAYRIQSRASMSKVSVNN 420

Query: 419  KGIGSNNADSGKMYHQSVVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRS 478
            +       D+GKM+H S+VSLFES WSTLQMVVLREILLSAVRAGDPL AWSAAARLLR 
Sbjct: 421  ET--GRLPDAGKMHHHSIVSLFESHWSTLQMVVLREILLSAVRAGDPLAAWSAAARLLRW 478

Query: 479  YYPLIPPAGQHGLANALLNSAERLPPGTRCADPALPFIRLHSFPLHPIQMDIVKRNPARE 538
            +YPLI P+GQ+GLAN+L NSA+RLP GTRCADPALPF+RL SFPLH  Q+DIVKRNPARE
Sbjct: 479  HYPLITPSGQNGLANSLANSADRLPSGTRCADPALPFVRLFSFPLHSSQVDIVKRNPARE 538

Query: 539  DWWAGSAPSGPFIYTPFSKGEPNNMKKQELIWVVGEPVQVLVELANPCGFDLRVDSIYLS 598
            DWW GSAPSGPFIYTPFSKG+ N   KQELIWVVGEPVQVLVELANPC FDLR+DSIYLS
Sbjct: 539  DWWTGSAPSGPFIYTPFSKGDANESSKQELIWVVGEPVQVLVELANPCCFDLRIDSIYLS 598

Query: 599  VHSGNFDAFPVSVSLLPNSSKVITLSGIPTSVGTVTIPGCIVHCFGVITEHLFREVDNLL 658
             HS NFDAFPVSV + PNS+KVITLSGIPT+VG VTIPGC VHCFGVITEH+FR+VDNLL
Sbjct: 599  AHSSNFDAFPVSVDIPPNSAKVITLSGIPTAVGPVTIPGCTVHCFGVITEHVFRDVDNLL 658

Query: 659  LGAAQGLVLSDPFRCCGSPKLKNVSVPNISVVQPLPLLISHVVGGDGAIILYEGEIRDVW 718
            LGAAQGLV SDPFR CGS KL++V VPNISV  PLPLL+++VVGGDGAIILYEGEIR+V 
Sbjct: 659  LGAAQGLVFSDPFRSCGSAKLRHVFVPNISVAPPLPLLVANVVGGDGAIILYEGEIREVC 718

Query: 719  ISLANAGTVQIEQAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTFPVTLRAWQVGSV 778
            I+ ANAGTV I QAH+SLSGKNQD+VIS + E L+S LPLKPGA+VT PVTL+AW VG  
Sbjct: 719  INFANAGTVPIVQAHVSLSGKNQDAVISIADEALQSALPLKPGAQVTLPVTLKAWHVGPT 778

Query: 779  DTDTGV--GRTVSGSNMRHSKDGSDPSLLIHYAGPLKTSEEPLTNGSTVPPGRRLIVPLQ 836
            D+D  +  GR  +G+  R  KDG+ PSLLIHYAGPL  + +     S VPPGRRL+VPLQ
Sbjct: 779  DSDNTMSSGRNAAGNTGR-PKDGTSPSLLIHYAGPLSNNGDSQEKESIVPPGRRLVVPLQ 837

Query: 837  ICVLQGLSFVKAQLLSMEFPAHVGENLPKLDDMDNKSPGEHVKSETKMDRLVKIDPFRGS 896
            ICVLQGLSFVKA+LLSME PAHV +NL            E ++ E+  D LVKI+PFRGS
Sbjct: 838  ICVLQGLSFVKARLLSMEIPAHVSDNLRD----------EDIERESNADSLVKINPFRGS 887

Query: 897  WGLRFLELELSNPTDVAFEINVSVKLENSSNEDNHLADQGATEYGYPKTRIDRDCSARVL 956
            WGLRFLELELSNPTDV FEI+V V+LENS+ ED+    Q + EY YPKTRIDRD SARVL
Sbjct: 888  WGLRFLELELSNPTDVVFEISVFVQLENSAKEDDSSPVQDSPEYEYPKTRIDRDYSARVL 947

Query: 957  VPLEHFKLPVLDDSFFMKXXXXXXXXXXXXXSFSEKSTKAELNACIKNLISRIKVQWHSG 1016
            +PLEHFKLPVLD SFF K             SFSEK+TKAE+N  IKNLIS+IKV+W SG
Sbjct: 948  IPLEHFKLPVLDGSFFTKDPPPGSPSSSRNPSFSEKNTKAEINTLIKNLISKIKVRWQSG 1007

Query: 1017 RNSSGELNIRDAIQAALQTSVMDVLLPDPLTFGFRLVRDGFESEKLDSDKESDIIESPAS 1076
            RNSSGEL+I+DAIQ ALQT+VMDVLLPDPLTFGFRLVR+G E      D E+   ESP S
Sbjct: 1008 RNSSGELDIKDAIQTALQTTVMDVLLPDPLTFGFRLVRNGLE-----KDPETK-AESPFS 1061

Query: 1077 KDSVLAHEMTPMEVVVRNNTKDMIKMSLNITCRDVAGENCVDGIKATVLWTGVLSDITME 1136
            K SVL+HE+TPMEV+VRNNT + IK++L++TCRDVAG+NC +G  ATVLW G LS I+ME
Sbjct: 1062 KGSVLSHEVTPMEVLVRNNTSEAIKLNLSVTCRDVAGQNCTEGADATVLWAGALSGISME 1121

Query: 1137 IPPLQQIKHSFCLHFFVPGEYTLLAAAVIEDASDILRARAKTTSAAEPIFCRGPPYHVRV 1196
            + PLQ+ +H F L F VPGEYT++AAAVIEDA+++LRARA T S  EPIFCRGPP+HV V
Sbjct: 1122 VAPLQEARHCFSLFFLVPGEYTMVAAAVIEDANNVLRARAGTASPNEPIFCRGPPFHVCV 1181

Query: 1197 VGTA 1200
             G A
Sbjct: 1182 AGGA 1185