Miyakogusa Predicted Gene

Lj5g3v0528760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0528760.1 Non Chatacterized Hit- tr|I1ILY3|I1ILY3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,30.37,2e-16,seg,NULL;
Kinetochor_Ybp2,YAP-binding/Alf4/Glomulin,CUFF.53167.1
         (609 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11030.2 | Symbols: ALF4 | aberrant lateral root formation 4 ...   441   e-123
AT5G11030.3 | Symbols: ALF4 | aberrant lateral root formation 4 ...   404   e-112
AT5G11030.1 | Symbols: ALF4 | aberrant lateral root formation 4 ...   399   e-111

>AT5G11030.2 | Symbols: ALF4 | aberrant lateral root formation 4 |
           chr5:3490993-3495078 REVERSE LENGTH=602
          Length = 602

 Score =  441 bits (1133), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/599 (45%), Positives = 375/599 (62%), Gaps = 32/599 (5%)

Query: 22  RRILE----SYSKLAEAGDFNDSENTILELVKFLDSLSDTTLSEPDDERAENNAYGALFE 77
           RR+ E     +S + EAG F D E+ + ELV  LDSL +    + ++E   +     L E
Sbjct: 20  RRVRELLALCFSSVEEAGGFQDFESFVTELVSCLDSLYENVALDANNELENDVIEEVLDE 79

Query: 78  IHRYISSPSLHQEVVDALSFELPKAVSKFGSISSRLLDMAISIIDQLIVKCGPRDMLSIL 137
           I + +SSP + Q+V+DALSF LPK  SKF  ISSR L +   I+D+ +  C PRDMLSIL
Sbjct: 80  ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 139

Query: 138 CNTLGYSSKMTKPACYIVSPL-SGLSKVFISIQRRQFEQVKEAVPMILNVLKTVXXXXXX 196
           C  L  +++    A    +PL  GLSKVFI IQRR +EQ+K AVP++LNVLK +      
Sbjct: 140 CEALD-AARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDV 198

Query: 197 XXXXXVFVKAVEIAKSIHEVCDKLESVKKEKLQELLGLYVLQCMALVSTSISYKAAICDS 256
                +F KA+ IA SI +V  KL + ++ K++ LL LYV+Q  A++S SI  KAA C  
Sbjct: 199 QVED-LFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDKAASCIP 257

Query: 257 LVLQLSQISSYCGLSYLFLLTTYDVETVASSVFGDDKDDCMGCLSYVRQGAALSVIWGHV 316
           LV+QL    + CGL++L L+T  D E + S+V GDD D+ +     +  GA+L  I   +
Sbjct: 258 LVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVAGDD-DEFITSFPDISLGASLLFICAKI 316

Query: 317 SEGVAHAAKEDLIVIKDELCNNQMKRWQAIGTLKHVLFFVNLPWELKKHTIDFLLSITDG 376
           S  VA AA   L  + DEL NN +KRWQA G LK++L   +L WE K+H I+FLL IT G
Sbjct: 317 SHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIEFLLDITKG 376

Query: 377 SISRKCNNEHSELLSYMPNVFSALQAVKMVIMHAPDPEVRKKSFAVLKGVLADIPISQRF 436
             S +CN+E  +   Y P +++ LQAV ++IM+APD ++RKK+F  LK VL+DIP   RF
Sbjct: 377 VTSSQCNDEQIDCSDYTPGIYATLQAVTLLIMYAPDADLRKKTFEALKRVLSDIPAPHRF 436

Query: 437 DILKALIANTDSSSMIAILIDLVRREMHTEICSRTSAVKNVAPINNKVHPNISFWNPSVL 496
           D+L+AL+ N+ S SM AIL+ LV+  M       T    + A ++             V+
Sbjct: 437 DVLRALVTNSRSPSMTAILLGLVKDSMSKSSLQDT----DCAAVDTH-----------VI 481

Query: 497 ELVELVLRPSQGGPPPLPEQSDAVLSALNLYRFVLMTES----SGKTNC---TGVLSRNT 549
           ELVELVLRP QGGPP LP+QSDA+L+ALNLYRF L+ ES    +GK      + +LS+  
Sbjct: 482 ELVELVLRPPQGGPPLLPDQSDAILAALNLYRFALLFESRECEAGKERSKVGSDILSKKN 541

Query: 550 LLKAFNEWLLPLRTLVTGILAEN-KNDYDQ-LAVDTLCTINPLELVLYRCIELVEDKIK 606
           L KA+ EWLLPLRTLV+  +AEN K D+ Q  ++D +  +NP+ELVLYRCIELVE+K+K
Sbjct: 542 LEKAYKEWLLPLRTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYRCIELVEEKLK 600


>AT5G11030.3 | Symbols: ALF4 | aberrant lateral root formation 4 |
           chr5:3490993-3495078 REVERSE LENGTH=574
          Length = 574

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/595 (44%), Positives = 355/595 (59%), Gaps = 52/595 (8%)

Query: 22  RRILE----SYSKLAEAGDFNDSENTILELVKFLDSLSDTTLSEPDDERAENNAYGALFE 77
           RR+ E     +S + EAG F D E+ + ELV  LDSL +    + ++E   +     L E
Sbjct: 20  RRVRELLALCFSSVEEAGGFQDFESFVTELVSCLDSLYENVALDANNELENDVIEEVLDE 79

Query: 78  IHRYISSPSLHQEVVDALSFELPKAVSKFGSISSRLLDMAISIIDQLIVKCGPRDMLSIL 137
           I + +SSP + Q+V+DALSF LPK  SKF  ISSR L +   I+D+ +  C PRDMLSIL
Sbjct: 80  ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 139

Query: 138 CNTLGYSSKMTKPACYIVSP-LSGLSKVFISIQRRQFEQVKEAVPMILNVLKTVXXXXXX 196
           C  L  +++    A    +P L GLSKVFI IQRR +EQ+K AVP++LNVLK +      
Sbjct: 140 CEALD-AARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDI-SLETD 197

Query: 197 XXXXXVFVKAVEIAKSIHEVCDKLESVKKEKLQELLGLYVLQCMALVSTSISYKAAICDS 256
                +F KA+ IA SI +V  KL + ++ K++ LL LYV+Q  A++S SI  KAA C  
Sbjct: 198 VQVEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDKAASCIP 257

Query: 257 LVLQLSQISSYCGLSYLFLLTTYDVETVASSVFGDDKDDCMGCLSYVRQGAALSVIWGHV 316
           LV+QL    + CGL++L L+T  D E + S+V GDD D+ +     +  GA+L  I   +
Sbjct: 258 LVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVAGDD-DEFITSFPDISLGASLLFICAKI 316

Query: 317 SEGVAHAAKEDLIVIKDELCNNQMKRWQAIGTLKHVLFFVNLPWELKKHTIDFLLSITDG 376
           S  VA AA   L  + DEL NN +KRWQA G LK++L   +L WE K+H I+FLL IT G
Sbjct: 317 SHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIEFLLDITKG 376

Query: 377 SISRKCNNEHSELLSYMPNVFSALQAVKMVIMHAPDPEVRKKSFAVLKGVLADIPISQRF 436
             S +CN+E  +   Y P +++ LQ                        VL+DIP   RF
Sbjct: 377 VTSSQCNDEQIDCSDYTPGIYATLQ------------------------VLSDIPAPHRF 412

Query: 437 DILKALIANTDSSSMIAILIDLVRREMHTEICSRTSAVKNVAPINNKVHPNISFWNPSVL 496
           D+L+AL+ N+ S SM AIL+ LV+  M       T    + A ++             V+
Sbjct: 413 DVLRALVTNSRSPSMTAILLGLVKDSMSKSSLQDT----DCAAVDTH-----------VI 457

Query: 497 ELVELVLRPSQGGPPPLPEQSDAVLSALNLYRFVLMTESSGKTNC---TGVLSRNTLLKA 553
           ELVELVLRP QGGPP LP+QSDA+L+ALNLYRF L+ ES GK      + +LS+  L KA
Sbjct: 458 ELVELVLRPPQGGPPLLPDQSDAILAALNLYRFALLFESRGKERSKVGSDILSKKNLEKA 517

Query: 554 FNEWLLPLRTLVTGILAEN-KNDYDQ-LAVDTLCTINPLELVLYRCIELVEDKIK 606
           + EWLLPLRTLV+  +AEN K D+ Q  ++D +  +NP+ELVLYRCIELVE+K+K
Sbjct: 518 YKEWLLPLRTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYRCIELVEEKLK 572


>AT5G11030.1 | Symbols: ALF4 | aberrant lateral root formation 4 |
           chr5:3490993-3495078 REVERSE LENGTH=578
          Length = 578

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 262/599 (43%), Positives = 356/599 (59%), Gaps = 56/599 (9%)

Query: 22  RRILE----SYSKLAEAGDFNDSENTILELVKFLDSLSDTTLSEPDDERAENNAYGALFE 77
           RR+ E     +S + EAG F D E+ + ELV  LDSL +    + ++E   +     L E
Sbjct: 20  RRVRELLALCFSSVEEAGGFQDFESFVTELVSCLDSLYENVALDANNELENDVIEEVLDE 79

Query: 78  IHRYISSPSLHQEVVDALSFELPKAVSKFGSISSRLLDMAISIIDQLIVKCGPRDMLSIL 137
           I + +SSP + Q+V+DALSF LPK  SKF  ISSR L +   I+D+ +  C PRDMLSIL
Sbjct: 80  ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 139

Query: 138 CNTLGYSSKMTKPACYIVSP-LSGLSKVFISIQRRQFEQVKEAVPMILNVLKTVXXXXXX 196
           C  L  +++    A    +P L GLSKVFI IQRR +EQ+K AVP++LNVLK +      
Sbjct: 140 CEALD-AARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDI-SLETD 197

Query: 197 XXXXXVFVKAVEIAKSIHEVCDKLESVKKEKLQELLGLYVLQCMALVSTSISYKAAICDS 256
                +F KA+ IA SI +V  KL + ++ K++ LL LYV+Q  A++S SI  KAA C  
Sbjct: 198 VQVEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDKAASCIP 257

Query: 257 LVLQLSQISSYCGLSYLFLLTTYDVETVASSVFGDDKDDCMGCLSYVRQGAALSVIWGHV 316
           LV+QL    + CGL++L L+T  D E + S+V GDD D+ +     +  GA+L  I   +
Sbjct: 258 LVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVAGDD-DEFITSFPDISLGASLLFICAKI 316

Query: 317 SEGVAHAAKEDLIVIKDELCNNQMKRWQAIGTLKHVLFFVNLPWELKKHTIDFLLSITDG 376
           S  VA AA   L  + DEL NN +KRWQA G LK++L   +L WE K+H I+FLL IT G
Sbjct: 317 SHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIEFLLDITKG 376

Query: 377 SISRKCNNEHSELLSYMPNVFSALQAVKMVIMHAPDPEVRKKSFAVLKGVLADIPISQRF 436
             S +CN+E  +   Y P +++ LQ                        VL+DIP   RF
Sbjct: 377 VTSSQCNDEQIDCSDYTPGIYATLQ------------------------VLSDIPAPHRF 412

Query: 437 DILKALIANTDSSSMIAILIDLVRREMHTEICSRTSAVKNVAPINNKVHPNISFWNPSVL 496
           D+L+AL+ N+ S SM AIL+ LV+  M       T    + A ++             V+
Sbjct: 413 DVLRALVTNSRSPSMTAILLGLVKDSMSKSSLQDT----DCAAVDTH-----------VI 457

Query: 497 ELVELVLRPSQGGPPPLPEQSDAVLSALNLYRFVLMTES----SGKTNC---TGVLSRNT 549
           ELVELVLRP QGGPP LP+QSDA+L+ALNLYRF L+ ES    +GK      + +LS+  
Sbjct: 458 ELVELVLRPPQGGPPLLPDQSDAILAALNLYRFALLFESRECEAGKERSKVGSDILSKKN 517

Query: 550 LLKAFNEWLLPLRTLVTGILAEN-KNDYDQ-LAVDTLCTINPLELVLYRCIELVEDKIK 606
           L KA+ EWLLPLRTLV+  +AEN K D+ Q  ++D +  +NP+ELVLYRCIELVE+K+K
Sbjct: 518 LEKAYKEWLLPLRTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYRCIELVEEKLK 576