Miyakogusa Predicted Gene

Lj5g3v0526500.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526500.1 tr|G7JD84|G7JD84_MEDTR Mitochondrial acidic
protein MAM33 OS=Medicago truncatula GN=MTR_4g006560
PE=,40.57,3e-19,Mitochondrial glycoprotein MAM33-like,Mitochondrial
glycoprotein; COMPLEMENT COMPONENT 1-RELATED,NUL,gene.g59058.t1.1
         (120 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family prot...   122   4e-29
AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family prot...    98   1e-21
AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family prot...    85   1e-17
AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family prot...    65   1e-11
AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family prot...    64   3e-11
AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    59   8e-10
AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    54   2e-08
AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family prot...    54   3e-08

>AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15449710-15450804 REVERSE LENGTH=234
          Length = 234

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 79/117 (67%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRR 60
           MFD + ++   G D+SG DVRLH SLLVDISK +   E+EF+CS WP  + + K++ LRR
Sbjct: 109 MFDGFMNVPRAGLDASGHDVRLHISLLVDISKVDGSEEIEFLCSVWPNRIEIRKLYKLRR 168

Query: 61  GHMPARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
             +  +P++GPNF +L    Q   RE+L  RG++  L  FLH+YM+ KDRIE ++W+
Sbjct: 169 NKITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHEYMMNKDRIELIQWL 225


>AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:5457153-5458245 FORWARD LENGTH=242
          Length = 242

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 1/109 (0%)

Query: 9   TGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPF 68
           +     S   DV+LH + +V+ISKG DG  LE +CSAWP  + + K F+ +        +
Sbjct: 125 SSKSTTSDPEDVQLHITFIVNISKG-DGETLEIMCSAWPDTIQITKFFVRKSSQNSPNAY 183

Query: 69  LGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           +GP F+++  ++Q+    +L+ RG++D LA FLH YM  KD+ E++RWM
Sbjct: 184 IGPEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWM 232


>AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:30336289-30337347 FORWARD LENGTH=190
          Length = 190

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 59/96 (61%)

Query: 22  LHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFLGPNFRDLNPKVQ 81
           LH + +V+ISK      LE +CSAWP  + + K+ I R  +     + GP F +L+ ++Q
Sbjct: 85  LHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIRRGINTSPSSYGGPEFEELDDQLQ 144

Query: 82  EKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           +   ++L+ RG++D LA FLH YM  K + E++RWM
Sbjct: 145 DALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWM 180


>AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:1806911-1807895 REVERSE LENGTH=259
          Length = 259

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 11/98 (11%)

Query: 26  LLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARP------FLGPNFRDLNPK 79
           LLV +SK + G  LEF C+A+P  + ++ +++      P  P      + GP+FR L+ K
Sbjct: 158 LLVTLSK-KTGPSLEFRCTAFPDRIAIKDMWVT----FPDDPSKDELAYEGPSFRVLDEK 212

Query: 80  VQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           +++ F  Y++ RG+  ++  FLH+YM+ KD  EHL W+
Sbjct: 213 LRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWL 250


>AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:403239-404244 REVERSE LENGTH=267
          Length = 267

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 5/105 (4%)

Query: 14  DSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILR-RGHMPARPFLGPN 72
           +SSG   ++   ++V + KG DG  LEF  SA+P  + ++ + I + +G      + GP+
Sbjct: 158 ESSG---KVRVPMVVSVQKG-DGVCLEFGVSAYPDEIVIDSLSIKQPQGSDNDLAYEGPD 213

Query: 73  FRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           F DL+  +Q+ F  YL+ RG+  +   FL DY+  KD  E+L+W+
Sbjct: 214 FDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVANKDSREYLQWL 258


>AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr3:20622668-20623889 FORWARD LENGTH=258
          Length = 258

 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 26  LLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFL--GPNFRDLNPKVQEK 83
           L+V ++K + G  LEF C+A+P  + ++ + + R            GP+F++L+  +++ 
Sbjct: 157 LVVTVTK-KSGLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKS 215

Query: 84  FREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           F ++L+TRG+  +   FL++YM+ KD  E+L W+
Sbjct: 216 FHKFLETRGIKASATDFLYEYMMKKDSREYLLWL 249


>AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15726429-15727864 REVERSE LENGTH=227
          Length = 227

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 26  LLVDISKGEDGSELEFVCSAWPKCLNVEKVFI---LRRGHMPARP--FLGPNFRDLNPKV 80
           L V +SK      L F+C  +P  L +  V +   L    M   P  + GP+F +L+ K+
Sbjct: 114 LHVAVSKPNQPDSLHFLCGLYPDALGIHSVSMRPKLEALEMSDDPTQYTGPSFEELDEKM 173

Query: 81  QEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRW 116
           ++ F  +L+ RGVN++L  FL  ++  KD    LRW
Sbjct: 174 RDVFHGFLEERGVNESLFPFLQAWLYVKDHRNLLRW 209


>AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:16597026-16598028 FORWARD LENGTH=250
          Length = 250

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 10  GPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFL 69
           GP  +SS         L+V ++K + G  LEF C A+P  + ++ + +   G        
Sbjct: 140 GPSNESS-------IPLVVTVTK-KSGLTLEFSCMAFPDEIAIDALSVKHPGDSLEDQLA 191

Query: 70  --GPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
             GP+F DL+  +++ F ++L+ RGV  +   FLH+YM  K   E+  W+
Sbjct: 192 NEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWL 241