Miyakogusa Predicted Gene
- Lj5g3v0526470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0526470.1 tr|G7KFY0|G7KFY0_MEDTR Zinc finger protein
OS=Medicago truncatula GN=MTR_5g077370 PE=4
SV=1,36.57,2e-16,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; C2H2 and C2HC
zinc fingers,NULL; ZFP1 (ARABIDOPSIS THALIANA ZI,CUFF.53139.1
(293 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10970.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 127 8e-30
AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 | chr5:86875... 117 7e-27
AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch... 112 4e-25
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260... 88 8e-18
AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 | chr1:24620... 75 8e-14
AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | ch... 73 2e-13
AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfam... 65 7e-11
AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 63 3e-10
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016... 60 1e-09
AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfam... 59 5e-09
AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 | chr2:17507... 57 2e-08
AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers superfa... 55 7e-08
AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 54 1e-07
AT5G05120.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 53 3e-07
AT5G48890.1 | Symbols: | C2H2-like zinc finger protein | chr5:1... 52 5e-07
AT1G68360.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 52 6e-07
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |... 50 1e-06
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup... 50 2e-06
AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 50 2e-06
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin... 49 5e-06
>AT5G10970.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:3469268-3470086 FORWARD LENGTH=272
Length = 272
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 146/289 (50%), Gaps = 46/289 (15%)
Query: 16 SPSTPLQ---NPQEKKKKKNIEQSVXXXXXXXKDTK--VESL-LDLNVCSTDDSALDCST 69
S ST LQ +P+ + NI+ +V D K VE + LDL + D S +
Sbjct: 18 SASTSLQFSDSPKLSLENYNID-TVAAQEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQ 76
Query: 70 EGPELNLITCLDVGS-SPDANSSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQNAH 128
E LNL+ CL+ G +P N G + E ++FSCNYC R FYSSQALGGHQNAH
Sbjct: 77 E---LNLLDCLETGVVTPSFN-------GSTSTEQKLFSCNYCQRTFYSSQALGGHQNAH 126
Query: 129 KRERSIAKRSHHHHHRFGTQILASAAAFGFPFGHSNKPFASMASLPLYHGHIPLAIQAHS 188
KRER++AKR Q +ASAAAFG P+G + PF S + L IQAHS
Sbjct: 127 KRERTLAKRG---------QRMASAAAFGHPYGFAPVPFHGQYS------NRTLGIQAHS 171
Query: 189 MIHKPXXXXXXXXXXXXCGSHHNL-WSKPLIDQQAGKAKLAMAD----FHRPTTSALLSS 243
M HKP G + + WS+ + QQ AKL + H+ + L+S
Sbjct: 172 MSHKPSSYNVYG------GEYGQINWSRIPLVQQPAIAKLTSTENHYNHHQMMIAPPLTS 225
Query: 244 SRGSVGRFEVVDTVMNSAVNKEYLVTGGTRLKASSNQEEIKHLDLSLKL 292
+ ++GRF+V + ++ L G L + +E+ K+LDLSLKL
Sbjct: 226 TCENIGRFDVGRIPVEFPTSE--LWQRGEELLKPAEEEKQKNLDLSLKL 272
>AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 |
chr5:8687524-8688231 FORWARD LENGTH=235
Length = 235
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 116/242 (47%), Gaps = 35/242 (14%)
Query: 59 STDDSALDCSTEGPELNLITCLDVGSSPDANSSETNPLGCSEAEPRVFSCNYCHRKFYSS 118
S +D D ELNLI C+D +S N S T+ E ++FSCNYC R FYSS
Sbjct: 21 SIEDEERDVHNSSHELNLIDCIDDTTSI-VNESTTS------TEQKLFSCNYCQRTFYSS 73
Query: 119 QALGGHQNAHKRERSIAKRSHHHHHRFGTQILASAAAFGFPFGHSNKPFASMASLPLYHG 178
QALGGHQNAHKRER++AKR G ++ ASA+AFG P+G S PF Y+
Sbjct: 74 QALGGHQNAHKRERTLAKR--------GQRMAASASAFGHPYGFSPLPFHGQ-----YNN 120
Query: 179 HIPLAIQAHSMIHKPXXXXXXXXXXXXCGSHHNL--WSKPLIDQQAGKAKLAMADFHRPT 236
H L IQAHS+ HK G H+ WS+ DQQ K D
Sbjct: 121 HRSLGIQAHSISHK-------LSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHH 173
Query: 237 TSALLSSSRGSVGRFEVVDT------VMNSAVNKEYLVTGGTRLKASSNQEEIKHLDLSL 290
++ + R +D+ V+ + E L ++S+ EE + LDLSL
Sbjct: 174 HHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQKLDLSL 233
Query: 291 KL 292
KL
Sbjct: 234 KL 235
>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
chr1:30339493-30340179 REVERSE LENGTH=228
Length = 228
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
Query: 101 AEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRSHHHHHRFGTQILASAAAFGFPF 160
A+PRVFSCNYC RKFYSSQALGGHQNAHKRER++AKR ++ L+S + F F
Sbjct: 63 ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYY-----KMTLSSLPSSAFAF 117
Query: 161 GH-SNKPFASMASLPLYHGHI----PLAIQAHSMIHKP 193
GH S FASMASLPL HG + L IQAHS IHKP
Sbjct: 118 GHGSVSRFASMASLPL-HGSVNNRSTLGIQAHSTIHKP 154
>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
chr1:8726009-8726638 REVERSE LENGTH=209
Length = 209
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 26/119 (21%)
Query: 72 PELNLITCLDVGSSPDANSSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQNAHKRE 131
PE N ++ LD+ + D + +T C EA PRVFSCNYC RKFYSSQALGGHQNAHKRE
Sbjct: 28 PESNHVS-LDLKLN-DTFNDDTKSTKC-EANPRVFSCNYCRRKFYSSQALGGHQNAHKRE 84
Query: 132 RSIAKRSHHHHHRFGTQILASAAAFGFPFGHSNKPFASMASLPLYHGHIPLAIQAHSMI 190
R++AKR+ H G FGH ++P+ +S L +QAHS +
Sbjct: 85 RTMAKRAMH---------------MGRMFGHHHRPYTYTSS--------SLGMQAHSGL 120
>AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 |
chr1:24620063-24620845 REVERSE LENGTH=260
Length = 260
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRS 138
RVFSCNYC RKFYSSQALGGHQNAHKRER++AKR+
Sbjct: 83 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 117
>AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 |
chr5:23296019-23296471 FORWARD LENGTH=150
Length = 150
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 73 ELNLITCLDVGSSPDANSSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQNAHKRER 132
+LNL L+ S ++SS TN C E +PRVFSCNYC RKFYSSQALGGHQNAHK ER
Sbjct: 20 QLNLELVLEPSSMSSSSSSSTNSSSCLE-QPRVFSCNYCQRKFYSSQALGGHQNAHKLER 78
Query: 133 SIAKRS 138
++AK+S
Sbjct: 79 TLAKKS 84
>AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfamily
protein | chr5:4522260-4522745 FORWARD LENGTH=161
Length = 161
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRS 138
R+F C YC RKFY+SQALGGHQNAHKRER+ A+R+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70
>AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:335630-336277 FORWARD LENGTH=215
Length = 215
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 35/39 (89%)
Query: 99 SEAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR 137
+EA+ RVF+C +C ++F +SQALGGHQNAHK+ERS+AKR
Sbjct: 60 NEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKR 98
>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
chr1:25016644-25017237 FORWARD LENGTH=197
Length = 197
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 68 STEGPELNL--ITCLDVGSSPDANSSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQ 125
+TE L L I L+ +S SSE P S +E R + C YC R+F +SQALGGHQ
Sbjct: 2 ATETSSLKLFGINLLET-TSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQ 60
Query: 126 NAHKRERSIAKRS 138
NAHK+ER + KR+
Sbjct: 61 NAHKKERQLLKRA 73
>AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfamily
protein | chr3:21506845-21507606 REVERSE LENGTH=253
Length = 253
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR 137
R F C+YC R F +SQALGGHQNAHKRER +AKR
Sbjct: 89 RRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122
>AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 |
chr2:17507556-17508329 FORWARD LENGTH=257
Length = 257
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR 137
R F C+YC R F +SQALGGHQNAHKRER AKR
Sbjct: 93 RRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126
>AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers
superfamily protein | chr5:2043486-2044061 FORWARD
LENGTH=191
Length = 191
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 89 NSSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRSHHHHHRFGTQ 148
N +E N + + + F C+YC R F +SQALGGHQNAHKRER KR + H
Sbjct: 38 NYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLH------- 90
Query: 149 ILASAAAF 156
++AAAF
Sbjct: 91 --SNAAAF 96
>AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr4:9906918-9907532 FORWARD LENGTH=204
Length = 204
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Query: 103 PRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRSHHHHHRFGTQILASA 153
PR ++CN+C R+F S+QALGGH N H+R+R+ + R+H G+ + A+A
Sbjct: 43 PRSYTCNFCRREFRSAQALGGHMNVHRRDRA-SSRAHQ-----GSTVAAAA 87
>AT5G05120.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:1511232-1511837 FORWARD LENGTH=201
Length = 201
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 18/63 (28%)
Query: 105 VFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR------------------SHHHHHRFG 146
++ C YC RKF +QALGGHQNAH++ER + K+ S+ +HH F
Sbjct: 26 IYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQQKAFLAHLNRPEPDLYAYSYSYHHSFP 85
Query: 147 TQI 149
Q
Sbjct: 86 NQY 88
>AT5G48890.1 | Symbols: | C2H2-like zinc finger protein |
chr5:19820353-19820874 FORWARD LENGTH=173
Length = 173
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 90 SSETNPLGCSEAEPRVFSCNYCHRKFYSSQALGGHQNAHKRE 131
S E N + + R+F C +C RKF+SSQALGGHQNAHK+E
Sbjct: 19 SKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKE 60
>AT1G68360.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr1:25621678-25622412 REVERSE LENGTH=244
Length = 244
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRSH 139
R + C YC R+F +SQALGGHQNAHK+ER KR+
Sbjct: 71 RKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQ 106
>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
chr2:15827706-15828620 REVERSE LENGTH=304
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 103 PRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRSHHHH 142
PR ++C++C R+F S+QALGGH N H+R+R+ K++ +
Sbjct: 36 PRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQY 75
>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
superfamily protein | chr5:1828426-1829106 REVERSE
LENGTH=226
Length = 226
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 103 PRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR 137
PR +SC++C R+F S+QALGGH N H+R+R+ K+
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ 86
>AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:9885908-9886744 FORWARD LENGTH=278
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 104 RVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKR 137
++++C++C + F +SQALGGHQNAHK+ER K+
Sbjct: 78 KIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKK 111
>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
fingers superfamily protein | chr3:8242504-8243118
FORWARD LENGTH=204
Length = 204
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 103 PRVFSCNYCHRKFYSSQALGGHQNAHKRERS 133
PR ++C++C R+F S+QALGGH N H+R+R+
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA 74