Miyakogusa Predicted Gene

Lj5g3v0526300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526300.1 tr|I0Z9S1|I0Z9S1_9CHLO Abi-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,50.59,1e-17,Abi,CAAX amino terminal
protease,NODE_58224_length_436_cov_80.782112.path2.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14270.4 | Symbols:  | CAAX amino terminal protease family pr...   150   2e-37
AT1G14270.3 | Symbols:  | CAAX amino terminal protease family pr...   150   2e-37
AT1G14270.2 | Symbols:  | CAAX amino terminal protease family pr...   149   3e-37
AT1G14270.1 | Symbols:  | CAAX amino terminal protease family pr...   149   3e-37
AT2G20725.1 | Symbols:  | CAAX amino terminal protease family pr...    52   7e-08
AT5G60750.1 | Symbols:  | CAAX amino terminal protease family pr...    52   8e-08

>AT1G14270.4 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  150 bits (378), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 77/86 (89%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           M SLTKWVPTP+AIIISSA FALAH TPGEFPQLF+LG+ LG+SYAQT NL+TP+ IH F
Sbjct: 142 MVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGF 201

Query: 61  WNSGVILFLTFLQLQGYDIKELLQST 86
           WNSGVIL LTFLQ+QGYDIKELLQ+ 
Sbjct: 202 WNSGVILLLTFLQIQGYDIKELLQAN 227


>AT1G14270.3 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  150 bits (378), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 77/86 (89%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           M SLTKWVPTP+AIIISSA FALAH TPGEFPQLF+LG+ LG+SYAQT NL+TP+ IH F
Sbjct: 142 MVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGF 201

Query: 61  WNSGVILFLTFLQLQGYDIKELLQST 86
           WNSGVIL LTFLQ+QGYDIKELLQ+ 
Sbjct: 202 WNSGVILLLTFLQIQGYDIKELLQAN 227


>AT1G14270.2 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876503 REVERSE LENGTH=247
          Length = 247

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 77/86 (89%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           M SLTKWVPTP+AIIISSA FALAH TPGEFPQLF+LG+ LG+SYAQT NL+TP+ IH F
Sbjct: 162 MVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGF 221

Query: 61  WNSGVILFLTFLQLQGYDIKELLQST 86
           WNSGVIL LTFLQ+QGYDIKELLQ+ 
Sbjct: 222 WNSGVILLLTFLQIQGYDIKELLQAN 247


>AT1G14270.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4877195 REVERSE LENGTH=353
          Length = 353

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 77/86 (89%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           M SLTKWVPTP+AIIISSA FALAH TPGEFPQLF+LG+ LG+SYAQT NL+TP+ IH F
Sbjct: 268 MVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGF 327

Query: 61  WNSGVILFLTFLQLQGYDIKELLQST 86
           WNSGVIL LTFLQ+QGYDIKELLQ+ 
Sbjct: 328 WNSGVILLLTFLQIQGYDIKELLQAN 353


>AT2G20725.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr2:8934113-8935426 REVERSE LENGTH=301
          Length = 301

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 42/68 (61%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           +TSL   +    A++ISS VFA  H +  +F QLF +G  LG+ Y+ + NL + + +H+ 
Sbjct: 233 LTSLASRMEWWKALVISSGVFAAGHFSGEDFVQLFGIGCGLGLCYSWSGNLASSVLVHSL 292

Query: 61  WNSGVILF 68
           +N+  +LF
Sbjct: 293 YNALTLLF 300


>AT5G60750.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr5:24431072-24433199 FORWARD LENGTH=347
          Length = 347

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           + SLT+++P   AI++SS  FALAH        L  LG  LG+ +A++ NLL  + +H+ 
Sbjct: 277 LPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPLVFLGVVLGLIFARSRNLLPSMLLHSL 336

Query: 61  WNSGVILFL 69
           WN  V + L
Sbjct: 337 WNGFVFMEL 345