Miyakogusa Predicted Gene
- Lj5g3v0511000.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0511000.3 Non Chatacterized Hit- tr|I1K8N6|I1K8N6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43762
PE,57.6,3e-17,seg,NULL,CUFF.53762.3
(697 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 ... 344 1e-94
AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast; EXPR... 344 2e-94
AT1G80810.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 150 3e-36
AT1G80810.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 150 3e-36
AT5G10950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 114 3e-25
AT1G15940.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 103 4e-22
AT5G47690.3 | Symbols: | binding | chr5:19317899-19327014 FORWA... 96 8e-20
AT5G47690.2 | Symbols: | binding | chr5:19317899-19327014 FORWA... 96 8e-20
AT5G47690.1 | Symbols: | binding | chr5:19317899-19327014 FORWA... 96 8e-20
AT4G32970.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 81 3e-15
AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | c... 69 1e-11
AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-91293... 69 1e-11
AT1G77600.1 | Symbols: | ARM repeat superfamily protein | chr1:... 68 2e-11
AT1G77600.2 | Symbols: | ARM repeat superfamily protein | chr1:... 68 3e-11
AT1G77600.3 | Symbols: | ARM repeat superfamily protein | chr1:... 67 3e-11
AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcriptio... 59 1e-08
AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcriptio... 59 1e-08
AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 | chr1:17... 50 4e-06
AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 | ... 50 4e-06
>AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is:
Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). |
chr4:15419435-15423939 REVERSE LENGTH=872
Length = 872
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 248/625 (39%), Positives = 354/625 (56%), Gaps = 64/625 (10%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK VF+LIVSSFE+L D SSRS AKR SIL+TVAKVRSCVVMLDLECDAL+ EMFQHF K
Sbjct: 101 MKEVFKLIVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLK 160
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
IR+HHSG+VF+SME IM PI+ SVKKD+ E+ ++RRL E+VL
Sbjct: 161 AIRDHHSGNVFSSMENIMTLVLEESEDIPSEMLSPILHSVKKDD-EISQVSRRLAEQVLS 219
Query: 121 SSATRLKPYLVQAVDALGLSLDDYDDVLASICQDTSGNLDQNDVTENSKEAEQ------- 173
+ A++LK YL +AV + G+ LD Y +++ASIC+ T L Q+ V N KE Q
Sbjct: 220 NCASKLKTYLTEAVKSSGVPLDKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRET 279
Query: 174 ---------PQKDDPVGDRSPKSAMSNGIAQAGEDDALVDSKSLLKPDDTDYSVQSKGDN 224
P++ D D S KS +SNG+AQ ++D+ VD+ S+ K DDT
Sbjct: 280 EVEAAEISTPERTDAPKDESGKSGVSNGVAQ--QNDSSVDTDSMKKQDDT---------- 327
Query: 225 LSGNEKPNDL-NPENVESNELKPVQP-----TKKRGRKPSTSKMAEPSEGSYLADEKDAE 278
++P L NP N + N +P +++ + S+ K A+ S+ S + +E +
Sbjct: 328 -GAKDEPQQLDNPRNTDLNNTTEEKPDVEHQIEEKENESSSVKQADLSKDSDIKEETEPA 386
Query: 279 KKIDSKSHSKDVPSSHKGDCA-EAAGPSKNNKEVNAKISSPKAGDGESDAVASPSPSERT 337
+ +D SKDV +S D + AA S+N K + +I K E+ V+SPS +E
Sbjct: 387 ELLD----SKDVLTSPPVDSSVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEEL 442
Query: 338 HDDEXXXXXXXXXXXXXXXAKEV--AAEDVSQKVSEGTCDSEAKPTRPSAKKGLGRGSDV 395
++ +EV +A +++VSE SE + T+ S KK S
Sbjct: 443 P-EQSVPKKTANQKKKESSTEEVKPSASIATEEVSEEPNTSEPQVTKKSGKK---VASSS 498
Query: 396 KITTVVDAVKKGSGSNDLDVKKQSAKKTEERNKGSGGS--SLRLSEDKKRSGRGKGNPEK 453
K V KK + + AK++E++ GS + S + E+KK+ GRGK E+
Sbjct: 499 KTKPTVPPSKKSTSETKV------AKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDEE 552
Query: 454 ALAKSSAKDEDEEMVSLQKSAMKSTKEH---LEETPKTNLKRKRTPGKENESDNKKYGDE 510
+L SS D ++ VS K A KS KE +EE+P +N KRKR+ G+ K G+
Sbjct: 553 SLHTSSG-DNEKPAVSSGKLASKSKKEAKQTVEESPNSNTKRKRSLGQ-----GKASGES 606
Query: 511 LVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSD 570
LVG+R+KVWWP D+ +Y+G+V+S+D++ KKH V+YDDGDQE L LK +KWS + + S
Sbjct: 607 LVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGDQEILYLKNQKWSPLDESELSQ 666
Query: 571 EEEARGGTSHDDASADMPPTKKGKT 595
+EEA T ++ ++ +P TKK KT
Sbjct: 667 DEEAADQTGQEEDASTVPLTKKAKT 691
>AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: Tudor/PWWP/MBT superfamily protein
(TAIR:AT1G15940.1); Has 137162 Blast hits to 70781
proteins in 2973 species: Archae - 289; Bacteria -
24182; Metazoa - 56725; Fungi - 20130; Plants - 6559;
Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink). | chr4:15419435-15423939 REVERSE LENGTH=873
Length = 873
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 354/626 (56%), Gaps = 65/626 (10%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK VF+LIVSSFE+L D SSRS AKR SIL+TVAKVRSCVVMLDLECDAL+ EMFQHF K
Sbjct: 101 MKEVFKLIVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLK 160
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
IR+HHSG+VF+SME IM PI+ SVKKD+ E+ ++RRL E+VL
Sbjct: 161 AIRDHHSGNVFSSMENIMTLVLEESEDIPSEMLSPILHSVKKDD-EISQVSRRLAEQVLS 219
Query: 121 SSATRLKPYLVQAVDALGLSLDDYDDVLASICQDTSGNLDQNDVTENSKEAEQ------- 173
+ A++LK YL +AV + G+ LD Y +++ASIC+ T L Q+ V N KE Q
Sbjct: 220 NCASKLKTYLTEAVKSSGVPLDKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRET 279
Query: 174 ----------PQKDDPVGDRSPKSAMSNGIAQAGEDDALVDSKSLLKPDDTDYSVQSKGD 223
P++ D D S KS +SNG+AQ ++D+ VD+ S+ K DDT
Sbjct: 280 EVEKAAEISTPERTDAPKDESGKSGVSNGVAQ--QNDSSVDTDSMKKQDDT--------- 328
Query: 224 NLSGNEKPNDL-NPENVESNELKPVQP-----TKKRGRKPSTSKMAEPSEGSYLADEKDA 277
++P L NP N + N +P +++ + S+ K A+ S+ S + +E +
Sbjct: 329 --GAKDEPQQLDNPRNTDLNNTTEEKPDVEHQIEEKENESSSVKQADLSKDSDIKEETEP 386
Query: 278 EKKIDSKSHSKDVPSSHKGDCA-EAAGPSKNNKEVNAKISSPKAGDGESDAVASPSPSER 336
+ +D SKDV +S D + AA S+N K + +I K E+ V+SPS +E
Sbjct: 387 AELLD----SKDVLTSPPVDSSVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEE 442
Query: 337 THDDEXXXXXXXXXXXXXXXAKEV--AAEDVSQKVSEGTCDSEAKPTRPSAKKGLGRGSD 394
++ +EV +A +++VSE SE + T+ S KK S
Sbjct: 443 LP-EQSVPKKTANQKKKESSTEEVKPSASIATEEVSEEPNTSEPQVTKKSGKK---VASS 498
Query: 395 VKITTVVDAVKKGSGSNDLDVKKQSAKKTEERNKGSGGS--SLRLSEDKKRSGRGKGNPE 452
K V KK + + AK++E++ GS + S + E+KK+ GRGK E
Sbjct: 499 SKTKPTVPPSKKSTSETKV------AKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDE 552
Query: 453 KALAKSSAKDEDEEMVSLQKSAMKSTKEH---LEETPKTNLKRKRTPGKENESDNKKYGD 509
++L SS D ++ VS K A KS KE +EE+P +N KRKR+ G+ K G+
Sbjct: 553 ESLHTSSG-DNEKPAVSSGKLASKSKKEAKQTVEESPNSNTKRKRSLGQ-----GKASGE 606
Query: 510 ELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADS 569
LVG+R+KVWWP D+ +Y+G+V+S+D++ KKH V+YDDGDQE L LK +KWS + + S
Sbjct: 607 SLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGDQEILYLKNQKWSPLDESELS 666
Query: 570 DEEEARGGTSHDDASADMPPTKKGKT 595
+EEA T ++ ++ +P TKK KT
Sbjct: 667 QDEEAADQTGQEEDASTVPLTKKAKT 692
>AT1G80810.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:30365575-30368898 FORWARD LENGTH=773
Length = 773
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 98/153 (64%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK +FRL + +FE L D SSRS K +LD VAKV+SC+VMLDLEC LI +MF++FFK
Sbjct: 51 MKEIFRLTIEAFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFK 110
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
IR H VF+SME IM ++ +VKK+N+ V P++ L EKVL
Sbjct: 111 FIRSDHPQLVFSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLS 170
Query: 121 SSATRLKPYLVQAVDALGLSLDDYDDVLASICQ 153
A +LKPY+++A+ + G SLD Y V++SICQ
Sbjct: 171 RCARKLKPYIIEALKSRGTSLDMYSPVVSSICQ 203
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 10/170 (5%)
Query: 405 KKGSGSNDLDVKKQSAKK---TEERNKGSGGSSLRLSEDKKRSGRGKGNPEKALAKSSAK 461
K+ N L+ +++AKK E + S G L KR + + + +SS +
Sbjct: 403 KQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAPLDTLVPQSSKR 462
Query: 462 DEDEEMVSLQKSAMKSTKEHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWP 521
++MVS Q +A + E EETPK++ R+RT KE SD +G++LVG RV +WWP
Sbjct: 463 ---KKMVS-QVAARQLANESEEETPKSHPTRRRTVRKEV-SDG--FGEDLVGKRVNIWWP 515
Query: 522 EDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDE 571
DK FYEG++DS+ + K H+V+Y DGD E LNL +E+W +++DD +DE
Sbjct: 516 LDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADE 565
>AT1G80810.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:30365575-30368898 FORWARD LENGTH=774
Length = 774
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 98/153 (64%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK +FRL + +FE L D SSRS K +LD VAKV+SC+VMLDLEC LI +MF++FFK
Sbjct: 51 MKEIFRLTIEAFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFK 110
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
IR H VF+SME IM ++ +VKK+N+ V P++ L EKVL
Sbjct: 111 FIRSDHPQLVFSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLS 170
Query: 121 SSATRLKPYLVQAVDALGLSLDDYDDVLASICQ 153
A +LKPY+++A+ + G SLD Y V++SICQ
Sbjct: 171 RCARKLKPYIIEALKSRGTSLDMYSPVVSSICQ 203
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 405 KKGSGSNDLDVKKQSAKK---TEERNKGSGGSSLRLSEDKKRSGRGKGNPEKALAKSSAK 461
K+ N L+ +++AKK E + S G L KR + + + +SS +
Sbjct: 403 KQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAPLDTLVPQSSKR 462
Query: 462 DEDEEMVSLQKSAMKSTKEHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWP 521
++MVS Q +A + E EETPK++ R+RT KE SD +G++LVG RV +WWP
Sbjct: 463 ---KKMVS-QVAARQLANESEEETPKSHPTRRRTVRKEV-SDG--FGEDLVGKRVNIWWP 515
Query: 522 EDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDEE 572
DK FYEG++DS+ + K H+V+Y DGD E LNL +E+W +++DD +DE+
Sbjct: 516 LDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADEQ 566
>AT5G10950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:3459557-3461632 REVERSE LENGTH=395
Length = 395
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%), Gaps = 10/110 (9%)
Query: 494 RTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETL 553
R+ GK+ SD +KYG+ LVG+R++VWWP D +FY+G+VDS+ SS KKH+V Y+DGD+ETL
Sbjct: 20 RSSGKDKVSDARKYGEALVGSRIRVWWPMDSKFYKGVVDSYVSSKKKHRVFYEDGDKETL 79
Query: 554 NLKKEKWSII-QDDADSD------EEEARGGTSHDDASADMPPTKKGKTS 596
+LKKE+W +I +DDA+S+ +EE+ G +S PP KGK S
Sbjct: 80 DLKKERWELIEEDDAESESDEISLQEESAGESSE---GTPEPPKGKGKAS 126
>AT1G15940.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:5473672-5478050 FORWARD LENGTH=990
Length = 990
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%)
Query: 483 EETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHK 542
E+ PK++ K KR G+E ES+ + G+ELVG RV VWWP DK+FYEG++ S+ K H+
Sbjct: 543 EQAPKSHPKMKRIAGEEVESNTNELGEELVGKRVNVWWPLDKKFYEGVIKSYCRVKKMHQ 602
Query: 543 VLYDDGDQETLNLKKEKWSIIQDDADSDE 571
V Y DGD E LNLKKE++ II+D + + E
Sbjct: 603 VTYSDGDVEELNLKKERFKIIEDKSSASE 631
>AT5G47690.3 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1607
Length = 1607
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 491 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 548
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1346 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1405
Query: 549 DQETLNLKKEKWSII 563
D E LNLKKE+W +I
Sbjct: 1406 DVEVLNLKKEQWELI 1420
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK +F+LIVS+F L D S S +R IL+TVAK RSCVVMLDLECD L+ E+F F
Sbjct: 98 MKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLD 157
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
R+ H VF+SM+ IM ++ + ++ +V ARRL KV+E
Sbjct: 158 VARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIE 217
Query: 121 SSATR----LKPYLVQAV 134
A + +K +L+ ++
Sbjct: 218 HCAPKVESDIKQFLISSM 235
>AT5G47690.2 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1606
Length = 1606
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 491 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 548
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1346 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1405
Query: 549 DQETLNLKKEKWSII 563
D E LNLKKE+W +I
Sbjct: 1406 DVEVLNLKKEQWELI 1420
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK +F+LIVS+F L D S S +R IL+TVAK RSCVVMLDLECD L+ E+F F
Sbjct: 98 MKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLD 157
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
R+ H VF+SM+ IM ++ + ++ +V ARRL KV+E
Sbjct: 158 VARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIE 217
Query: 121 SSATR----LKPYLVQAV 134
A + +K +L+ ++
Sbjct: 218 HCAPKVESDIKQFLISSM 235
>AT5G47690.1 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1605
Length = 1605
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 491 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 548
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1345 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1404
Query: 549 DQETLNLKKEKWSII 563
D E LNLKKE+W +I
Sbjct: 1405 DVEVLNLKKEQWELI 1419
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
MK +F+LIVS+F L D S S +R IL+TVAK RSCVVMLDLECD L+ E+F F
Sbjct: 98 MKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLD 157
Query: 61 TIREHHSGSVFASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLE 120
R+ H VF+SM+ IM ++ + ++ +V ARRL KV+E
Sbjct: 158 VARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIE 217
Query: 121 SSATR----LKPYLVQAV 134
A + +K +L+ ++
Sbjct: 218 HCAPKVESDIKQFLISSM 235
>AT4G32970.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G32960.1); Has 552 Blast hits to 489 proteins
in 85 species: Archae - 4; Bacteria - 14; Metazoa - 187;
Fungi - 12; Plants - 225; Viruses - 0; Other Eukaryotes
- 110 (source: NCBI BLink). | chr4:15910671-15914300
REVERSE LENGTH=638
Length = 638
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 468 VSLQKSAMKSTK---EHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDK 524
VS KSA STK + LE+ PKTN KR + GKE SD KKY +++VG+RVK+WWP D+
Sbjct: 239 VSCDKSASDSTKGAKQPLEKKPKTNTKRIHSLGKEKTSDFKKYDEKIVGSRVKIWWPLDR 298
Query: 525 EFYEGIVDSFDSSSKKHK 542
+YE +V S+ S+ ++H+
Sbjct: 299 AYYEAVVISYCSAKERHR 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 95 PIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLSLDDYDDVLASICQD 154
P +VKKD+E V I+RR E+VL + A+++K YL +A +SL + DV+ SIC
Sbjct: 355 PFPPNVKKDDE-VPQISRRQAEQVLSNCASQIKKYLTEAGKLSSVSLANPSDVVDSICGR 413
Query: 155 TSGNLDQNDVTENSKEAEQ 173
L Q DV N KE Q
Sbjct: 414 AFDALKQEDVVANEKEDRQ 432
>AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 |
chr4:906079-912930 FORWARD LENGTH=1324
Length = 1324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 507 YGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEK--WSIIQ 564
YGDE+VG +V+V+WP DK++Y+G V +D KH V Y+DG++E+L+L KEK W + +
Sbjct: 120 YGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGE 179
Query: 565 DDADSDEEEARGGTS 579
D RG ++
Sbjct: 180 KSGDRFNRLKRGASA 194
>AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-912930
FORWARD LENGTH=1321
Length = 1321
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 507 YGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEK--WSIIQ 564
YGDE+VG +V+V+WP DK++Y+G V +D KH V Y+DG++E+L+L KEK W + +
Sbjct: 120 YGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGE 179
Query: 565 DDADSDEEEARGGTS 579
D RG ++
Sbjct: 180 KSGDRFNRLKRGASA 194
>AT1G77600.1 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1367
Length = 1367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
++ +F L ++ F L D S +KR IL+TV++++ C++MLD +C L+ EMF FF
Sbjct: 106 LRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMFFS 165
Query: 61 TIREHHSGSV 70
+REHH S+
Sbjct: 166 LVREHHQQSL 175
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 503 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 562
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1213 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1272
Query: 563 IQDDADSDEE 572
+ ++ +E
Sbjct: 1273 LSHESMGQQE 1282
>AT1G77600.2 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1410
Length = 1410
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
++ +F L ++ F L D S +KR IL+TV++++ C++MLD +C L+ EMF FF
Sbjct: 106 LRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMFFS 165
Query: 61 TIREHHSGSV 70
+REHH S+
Sbjct: 166 LVREHHQQSL 175
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 503 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 562
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1249 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1308
Query: 563 IQDDADSDEE 572
+ ++ +E
Sbjct: 1309 LSHESMGQQE 1318
>AT1G77600.3 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1424
Length = 1424
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 1 MKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK 60
++ +F L ++ F L D S +KR IL+TV++++ C++MLD +C L+ EMF FF
Sbjct: 106 LRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMFFS 165
Query: 61 TIREHHSGSV 70
+REHH S+
Sbjct: 166 LVREHHQQSL 175
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 503 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 562
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1263 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1322
Query: 563 IQDDADSDEE 572
+ ++ +E
Sbjct: 1323 LSHESMGQQE 1332
>AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1540
Length = 1540
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 511 LVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSII 563
L+ ++KV+WP D+ +Y G VD FD H V YDD D+E +NL+ E++ I+
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKIL 407
>AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1539
Length = 1539
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 511 LVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSII 563
L+ ++KV+WP D+ +Y G VD FD H V YDD D+E +NL+ E++ I+
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKIL 407
>AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 510 ELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADS 569
+G + KV+WP D +Y G + ++ +K H V Y DGD E L L++EK + D
Sbjct: 219 HFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGDGDGEELALRREKIKFLISRDDM 278
Query: 570 DEEEARGGTS 579
+ + GT+
Sbjct: 279 ELLNMKFGTN 288
>AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 510 ELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADS 569
+G + KV+WP D +Y G + ++ +K H V Y DGD E L L++EK + D
Sbjct: 219 HFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGDGDGEELALRREKIKFLISRDDM 278
Query: 570 DEEEARGGTS 579
+ + GT+
Sbjct: 279 ELLNMKFGTN 288