Miyakogusa Predicted Gene
- Lj5g3v0511000.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0511000.2 tr|D7MP20|D7MP20_ARALL Binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494201
PE=4,44.72,3e-18,SUBFAMILY NOT NAMED,NULL; ANDROGEN INDUCED INHIBITOR
OF PROLIFERATION (AS3) / PDS5-RELATED,NULL; seg,CUFF.53762.2
(796 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 ... 484 e-136
AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast; EXPR... 483 e-136
AT1G15940.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 226 4e-59
AT1G80810.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 209 4e-54
AT1G80810.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 209 4e-54
AT5G47690.2 | Symbols: | binding | chr5:19317899-19327014 FORWA... 186 5e-47
AT5G47690.1 | Symbols: | binding | chr5:19317899-19327014 FORWA... 186 6e-47
AT5G47690.3 | Symbols: | binding | chr5:19317899-19327014 FORWA... 186 6e-47
AT1G77600.1 | Symbols: | ARM repeat superfamily protein | chr1:... 114 3e-25
AT1G77600.2 | Symbols: | ARM repeat superfamily protein | chr1:... 114 3e-25
AT5G10950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 114 3e-25
AT1G77600.3 | Symbols: | ARM repeat superfamily protein | chr1:... 114 4e-25
AT4G32970.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 81 3e-15
AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-91293... 70 7e-12
AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | c... 70 7e-12
AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcriptio... 59 1e-08
AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcriptio... 59 1e-08
AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 | chr1:17... 50 6e-06
AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 | ... 50 6e-06
>AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is:
Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). |
chr4:15419435-15423939 REVERSE LENGTH=872
Length = 872
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 315/725 (43%), Positives = 437/725 (60%), Gaps = 64/725 (8%)
Query: 1 MASTDKELEKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLK 60
M+ +DKELE Q+ EAG KL +PPSS+D+LL LD++ L +VEQSPP SMQ+AL+P +K
Sbjct: 1 MSDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMK 60
Query: 61 ALIDDKLLRHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSS 120
L+ KL +HSD+DVKVAVA+CISEITRITAPDAPYDDDQMK VF+LIVSSFE+L D SS
Sbjct: 61 GLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSS 120
Query: 121 RSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNX 180
RS AKR SIL+TVAKVRSCVVMLDLECDAL+ EMFQHF K IR+HHSG+VF+SME IM
Sbjct: 121 RSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTL 180
Query: 181 XXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLS 240
PI+ SVKKD+ E+ ++RRL E+VL + A++LK YL +AV + G+
Sbjct: 181 VLEESEDIPSEMLSPILHSVKKDD-EISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVP 239
Query: 241 LDDYDDVLASICQDTSGNLDQNDVTENSKEAEQ----------------PQQDDPVGDRS 284
LD Y +++ASIC+ T L Q+ V N KE Q P++ D D S
Sbjct: 240 LDKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRETEVEAAEISTPERTDAPKDES 299
Query: 285 PKSVMSNGIAQAGEDDALVDSKSLLKPDDTDYSVQSKGDNLSGNEKPNDL-NPENVESNE 343
KS +SNG+AQ ++D+ VD+ S+ K DDT ++P L NP N + N
Sbjct: 300 GKSGVSNGVAQ--QNDSSVDTDSMKKQDDT-----------GAKDEPQQLDNPRNTDLNN 346
Query: 344 LKPVQP-----TKKRGRKPSTSKMAEPSEGSYLADEKDAEKKIDSKSHSKDVPSSHKGDC 398
+P +++ + S+ K A+ S+ S + +E + + +D SKDV +S D
Sbjct: 347 TTEEKPDVEHQIEEKENESSSVKQADLSKDSDIKEETEPAELLD----SKDVLTSPPVDS 402
Query: 399 A-EAAGPSKNNKEVNAKISSPKAGDGESDAVASPSPSERTHDDEXXXXXXXXXXXXXXXA 457
+ AA S+N K + +I K E+ V+SPS +E ++
Sbjct: 403 SVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEELP-EQSVPKKTANQKKKESST 461
Query: 458 KEV--AAEDVSQKVSEGTCDSEAKPTRPSAKKGLGRGSDVKITTVVDAVKKGSGSNDLDV 515
+EV +A +++VSE SE + T+ S KK S K V KK + +
Sbjct: 462 EEVKPSASIATEEVSEEPNTSEPQVTKKSGKK---VASSSKTKPTVPPSKKSTSETKV-- 516
Query: 516 KKQSAKKTEERNKGSGGS--SLRLSEDKKRSGRGKGNPEKALAKSSAKDEDEEMVSLQKS 573
AK++E++ GS + S + E+KK+ GRGK E++L SS D ++ VS K
Sbjct: 517 ----AKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDEESLHTSSG-DNEKPAVSSGKL 571
Query: 574 AMKSTKEH---LEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEGI 630
A KS KE +EE+P +N KRKR+ G+ K G+ LVG+R+KVWWP D+ +Y+G+
Sbjct: 572 ASKSKKEAKQTVEESPNSNTKRKRSLGQ-----GKASGESLVGSRIKVWWPMDQAYYKGV 626
Query: 631 VDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDEEEARGGTSHDDASADMPPT 690
V+S+D++ KKH V+YDDGDQE L LK +KWS + + S +EEA T ++ ++ +P T
Sbjct: 627 VESYDAAKKKHLVIYDDGDQEILYLKNQKWSPLDESELSQDEEAADQTGQEEDASTVPLT 686
Query: 691 KKGKT 695
KK KT
Sbjct: 687 KKAKT 691
>AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: Tudor/PWWP/MBT superfamily protein
(TAIR:AT1G15940.1); Has 137162 Blast hits to 70781
proteins in 2973 species: Archae - 289; Bacteria -
24182; Metazoa - 56725; Fungi - 20130; Plants - 6559;
Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink). | chr4:15419435-15423939 REVERSE LENGTH=873
Length = 873
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 315/726 (43%), Positives = 437/726 (60%), Gaps = 65/726 (8%)
Query: 1 MASTDKELEKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLK 60
M+ +DKELE Q+ EAG KL +PPSS+D+LL LD++ L +VEQSPP SMQ+AL+P +K
Sbjct: 1 MSDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMK 60
Query: 61 ALIDDKLLRHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSS 120
L+ KL +HSD+DVKVAVA+CISEITRITAPDAPYDDDQMK VF+LIVSSFE+L D SS
Sbjct: 61 GLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSS 120
Query: 121 RSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNX 180
RS AKR SIL+TVAKVRSCVVMLDLECDAL+ EMFQHF K IR+HHSG+VF+SME IM
Sbjct: 121 RSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTL 180
Query: 181 XXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLS 240
PI+ SVKKD+ E+ ++RRL E+VL + A++LK YL +AV + G+
Sbjct: 181 VLEESEDIPSEMLSPILHSVKKDD-EISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVP 239
Query: 241 LDDYDDVLASICQDTSGNLDQNDVTENSKEAEQ-----------------PQQDDPVGDR 283
LD Y +++ASIC+ T L Q+ V N KE Q P++ D D
Sbjct: 240 LDKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRETEVEKAAEISTPERTDAPKDE 299
Query: 284 SPKSVMSNGIAQAGEDDALVDSKSLLKPDDTDYSVQSKGDNLSGNEKPNDL-NPENVESN 342
S KS +SNG+AQ ++D+ VD+ S+ K DDT ++P L NP N + N
Sbjct: 300 SGKSGVSNGVAQ--QNDSSVDTDSMKKQDDT-----------GAKDEPQQLDNPRNTDLN 346
Query: 343 ELKPVQP-----TKKRGRKPSTSKMAEPSEGSYLADEKDAEKKIDSKSHSKDVPSSHKGD 397
+P +++ + S+ K A+ S+ S + +E + + +D SKDV +S D
Sbjct: 347 NTTEEKPDVEHQIEEKENESSSVKQADLSKDSDIKEETEPAELLD----SKDVLTSPPVD 402
Query: 398 CA-EAAGPSKNNKEVNAKISSPKAGDGESDAVASPSPSERTHDDEXXXXXXXXXXXXXXX 456
+ AA S+N K + +I K E+ V+SPS +E ++
Sbjct: 403 SSVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEELP-EQSVPKKTANQKKKESS 461
Query: 457 AKEV--AAEDVSQKVSEGTCDSEAKPTRPSAKKGLGRGSDVKITTVVDAVKKGSGSNDLD 514
+EV +A +++VSE SE + T+ S KK S K V KK + +
Sbjct: 462 TEEVKPSASIATEEVSEEPNTSEPQVTKKSGKK---VASSSKTKPTVPPSKKSTSETKV- 517
Query: 515 VKKQSAKKTEERNKGSGGS--SLRLSEDKKRSGRGKGNPEKALAKSSAKDEDEEMVSLQK 572
AK++E++ GS + S + E+KK+ GRGK E++L SS D ++ VS K
Sbjct: 518 -----AKQSEKKVVGSDNAQESTKPKEEKKKPGRGKAIDEESLHTSSG-DNEKPAVSSGK 571
Query: 573 SAMKSTKEH---LEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEG 629
A KS KE +EE+P +N KRKR+ G+ K G+ LVG+R+KVWWP D+ +Y+G
Sbjct: 572 LASKSKKEAKQTVEESPNSNTKRKRSLGQ-----GKASGESLVGSRIKVWWPMDQAYYKG 626
Query: 630 IVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDEEEARGGTSHDDASADMPP 689
+V+S+D++ KKH V+YDDGDQE L LK +KWS + + S +EEA T ++ ++ +P
Sbjct: 627 VVESYDAAKKKHLVIYDDGDQEILYLKNQKWSPLDESELSQDEEAADQTGQEEDASTVPL 686
Query: 690 TKKGKT 695
TKK KT
Sbjct: 687 TKKAKT 692
>AT1G15940.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:5473672-5478050 FORWARD LENGTH=990
Length = 990
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
Query: 9 EKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLKALIDDKLL 68
E+ L +A L P S D L LL+ +E+ L VEQ S+Q AL P ++AL+ LL
Sbjct: 13 EQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVSADLL 72
Query: 69 RHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTS 128
R+ D DV+V+V SC++EI RITAP+APY+D+QMK +F++ + +FE L D SSRS K
Sbjct: 73 RNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYRKAEV 132
Query: 129 ILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNXXXXXXXXX 188
IL+TVAKVRS +VMLDLECD L+ EMFQ F K IR H V SMETIM
Sbjct: 133 ILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDESEEV 192
Query: 189 XXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLSLDDYDDVL 248
++ +VKKD+++V P A L EKVL S +L+P +++A+ + G SLD Y V+
Sbjct: 193 PMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVV 252
Query: 249 ASICQ-DTSGNLDQNDVTENSKEAEQ 273
+SICQ + + NDV EA++
Sbjct: 253 SSICQSEFATTQAHNDVKPKDNEADE 278
>AT1G80810.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:30365575-30368898 FORWARD LENGTH=774
Length = 774
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 133/203 (65%)
Query: 51 MQDALSPSLKALIDDKLLRHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVS 110
MQ AL PS AL+ LL H D DV+V+V SC++EI RITAP+ PY DD MK +FRL +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 111 SFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSV 170
+FE L D SSRS K +LD VAKV+SC+VMLDLEC LI +MF++FFK IR H V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 171 FASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYL 230
F+SME IM ++ +VKK+N+ V P++ L EKVL A +LKPY+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 231 VQAVDALGLSLDDYDDVLASICQ 253
++A+ + G SLD Y V++SICQ
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQ 203
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 505 KKGSGSNDLDVKKQSAKK---TEERNKGSGGSSLRLSEDKKRSGRGKGNPEKALAKSSAK 561
K+ N L+ +++AKK E + S G L KR + + + +SS +
Sbjct: 403 KQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAPLDTLVPQSSKR 462
Query: 562 DEDEEMVSLQKSAMKSTKEHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWP 621
++MVS Q +A + E EETPK++ R+RT KE SD +G++LVG RV +WWP
Sbjct: 463 ---KKMVS-QVAARQLANESEEETPKSHPTRRRTVRKEV-SDG--FGEDLVGKRVNIWWP 515
Query: 622 EDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDEE 672
DK FYEG++DS+ + K H+V+Y DGD E LNL +E+W +++DD +DE+
Sbjct: 516 LDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADEQ 566
>AT1G80810.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr1:30365575-30368898 FORWARD LENGTH=773
Length = 773
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 133/203 (65%)
Query: 51 MQDALSPSLKALIDDKLLRHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVS 110
MQ AL PS AL+ LL H D DV+V+V SC++EI RITAP+ PY DD MK +FRL +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 111 SFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSV 170
+FE L D SSRS K +LD VAKV+SC+VMLDLEC LI +MF++FFK IR H V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 171 FASMETIMNXXXXXXXXXXXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYL 230
F+SME IM ++ +VKK+N+ V P++ L EKVL A +LKPY+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 231 VQAVDALGLSLDDYDDVLASICQ 253
++A+ + G SLD Y V++SICQ
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQ 203
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 10/170 (5%)
Query: 505 KKGSGSNDLDVKKQSAKK---TEERNKGSGGSSLRLSEDKKRSGRGKGNPEKALAKSSAK 561
K+ N L+ +++AKK E + S G L KR + + + +SS +
Sbjct: 403 KQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAPLDTLVPQSSKR 462
Query: 562 DEDEEMVSLQKSAMKSTKEHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWP 621
++MVS Q +A + E EETPK++ R+RT KE SD +G++LVG RV +WWP
Sbjct: 463 ---KKMVS-QVAARQLANESEEETPKSHPTRRRTVRKEV-SDG--FGEDLVGKRVNIWWP 515
Query: 622 EDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADSDE 671
DK FYEG++DS+ + K H+V+Y DGD E LNL +E+W +++DD +DE
Sbjct: 516 LDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADE 565
>AT5G47690.2 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1606
Length = 1606
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 150/250 (60%), Gaps = 7/250 (2%)
Query: 9 EKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLKALIDDKLL 68
E+QL+E G+KL P S D LL+LL + CL ++EQSPP ++ ++ P L A+I ++L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 69 RHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTS 128
H D DVK+ VASC+SEITRITAP+APY D+ MK +F+LIVS+F L D S S +R
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 129 ILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNXXXXXXXXX 188
IL+TVAK RSCVVMLDLECD L+ E+F F R+ H VF+SM+ IM
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDV 185
Query: 189 XXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATR----LKPYLVQAVDA---LGLSL 241
++ + ++ +V ARRL KV+E A + +K +L+ ++ S
Sbjct: 186 QEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQ 245
Query: 242 DDYDDVLASI 251
DY +V+ +
Sbjct: 246 IDYHEVIYDL 255
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 591 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 648
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1346 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1405
Query: 649 DQETLNLKKEKWSII 663
D E LNLKKE+W +I
Sbjct: 1406 DVEVLNLKKEQWELI 1420
>AT5G47690.1 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1605
Length = 1605
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 150/250 (60%), Gaps = 7/250 (2%)
Query: 9 EKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLKALIDDKLL 68
E+QL+E G+KL P S D LL+LL + CL ++EQSPP ++ ++ P L A+I ++L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 69 RHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTS 128
H D DVK+ VASC+SEITRITAP+APY D+ MK +F+LIVS+F L D S S +R
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 129 ILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNXXXXXXXXX 188
IL+TVAK RSCVVMLDLECD L+ E+F F R+ H VF+SM+ IM
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDV 185
Query: 189 XXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATR----LKPYLVQAVDA---LGLSL 241
++ + ++ +V ARRL KV+E A + +K +L+ ++ S
Sbjct: 186 QEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQ 245
Query: 242 DDYDDVLASI 251
DY +V+ +
Sbjct: 246 IDYHEVIYDL 255
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 591 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 648
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1345 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1404
Query: 649 DQETLNLKKEKWSII 663
D E LNLKKE+W +I
Sbjct: 1405 DVEVLNLKKEQWELI 1419
>AT5G47690.3 | Symbols: | binding | chr5:19317899-19327014 FORWARD
LENGTH=1607
Length = 1607
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 150/250 (60%), Gaps = 7/250 (2%)
Query: 9 EKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLKALIDDKLL 68
E+QL+E G+KL P S D LL+LL + CL ++EQSPP ++ ++ P L A+I ++L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 69 RHSDIDVKVAVASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTS 128
H D DVK+ VASC+SEITRITAP+APY D+ MK +F+LIVS+F L D S S +R
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 129 ILDTVAKVRSCVVMLDLECDALISEMFQHFFKTIREHHSGSVFASMETIMNXXXXXXXXX 188
IL+TVAK RSCVVMLDLECD L+ E+F F R+ H VF+SM+ IM
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDV 185
Query: 189 XXXXXCPIIDSVKKDNEEVLPIARRLGEKVLESSATR----LKPYLVQAVDA---LGLSL 241
++ + ++ +V ARRL KV+E A + +K +L+ ++ S
Sbjct: 186 QEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQ 245
Query: 242 DDYDDVLASI 251
DY +V+ +
Sbjct: 246 IDYHEVIYDL 255
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 591 KRKRTPG--KENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDG 648
KRK G K + +NK DEL+G R++VWWP DK FYEG V S+DS+ ++H +LY+DG
Sbjct: 1346 KRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDG 1405
Query: 649 DQETLNLKKEKWSII 663
D E LNLKKE+W +I
Sbjct: 1406 DVEVLNLKKEQWELI 1420
>AT1G77600.1 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1367
Length = 1367
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 9/159 (5%)
Query: 27 DDLLRLLDQVENCLLKVEQSPP-------KSMQDALSPSLKALIDDKLLRHSDIDVKVAV 79
D L++LL +V N L K++Q K ++ L P K++I LL++ D DV + V
Sbjct: 25 DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84
Query: 80 ASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSC 139
C+SE+ RI AP P++D+ ++ +F L ++ F L D S +KR IL+TV++++ C
Sbjct: 85 TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144
Query: 140 VVMLDLECDALISEMFQHFFKTIREHHSGSVF--ASMET 176
++MLD +C L+ EMF FF +REHH S+ SM+T
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQSLINQKSMKT 183
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 603 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 662
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1213 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1272
Query: 663 IQDDADSDEE 672
+ ++ +E
Sbjct: 1273 LSHESMGQQE 1282
>AT1G77600.2 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1410
Length = 1410
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 27 DDLLRLLDQVENCLLKVEQSPP-------KSMQDALSPSLKALIDDKLLRHSDIDVKVAV 79
D L++LL +V N L K++Q K ++ L P K++I LL++ D DV + V
Sbjct: 25 DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84
Query: 80 ASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSC 139
C+SE+ RI AP P++D+ ++ +F L ++ F L D S +KR IL+TV++++ C
Sbjct: 85 TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144
Query: 140 VVMLDLECDALISEMFQHFFKTIREHHSGSV 170
++MLD +C L+ EMF FF +REHH S+
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQSL 175
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 603 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 662
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1249 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1308
Query: 663 IQDDADSDEE 672
+ ++ +E
Sbjct: 1309 LSHESMGQQE 1318
>AT5G10950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:3459557-3461632 REVERSE LENGTH=395
Length = 395
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%), Gaps = 10/110 (9%)
Query: 594 RTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETL 653
R+ GK+ SD +KYG+ LVG+R++VWWP D +FY+G+VDS+ SS KKH+V Y+DGD+ETL
Sbjct: 20 RSSGKDKVSDARKYGEALVGSRIRVWWPMDSKFYKGVVDSYVSSKKKHRVFYEDGDKETL 79
Query: 654 NLKKEKWSII-QDDADSD------EEEARGGTSHDDASADMPPTKKGKTS 696
+LKKE+W +I +DDA+S+ +EE+ G +S PP KGK S
Sbjct: 80 DLKKERWELIEEDDAESESDEISLQEESAGESSE---GTPEPPKGKGKAS 126
>AT1G77600.3 | Symbols: | ARM repeat superfamily protein |
chr1:29152890-29162156 REVERSE LENGTH=1424
Length = 1424
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 27 DDLLRLLDQVENCLLKVEQSPP-------KSMQDALSPSLKALIDDKLLRHSDIDVKVAV 79
D L++LL +V N L K++Q K ++ L P K++I LL++ D DV + V
Sbjct: 25 DSLVKLLREVANTLSKIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLV 84
Query: 80 ASCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSC 139
C+SE+ RI AP P++D+ ++ +F L ++ F L D S +KR IL+TV++++ C
Sbjct: 85 TVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFC 144
Query: 140 VVMLDLECDALISEMFQHFFKTIREHHSGSV 170
++MLD +C L+ EMF FF +REHH S+
Sbjct: 145 LLMLDEDCQDLVHEMFNMFFSLVREHHQQSL 175
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 603 DNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSI 662
D +G+ ++G R+K+ P D FY G V+ F+S S HK+++D+GD E + L E W
Sbjct: 1263 DISNHGEAIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWET 1322
Query: 663 IQDDADSDEE 672
+ ++ +E
Sbjct: 1323 LSHESMGQQE 1332
>AT4G32970.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G32960.1); Has 552 Blast hits to 489 proteins
in 85 species: Archae - 4; Bacteria - 14; Metazoa - 187;
Fungi - 12; Plants - 225; Viruses - 0; Other Eukaryotes
- 110 (source: NCBI BLink). | chr4:15910671-15914300
REVERSE LENGTH=638
Length = 638
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 568 VSLQKSAMKSTK---EHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDK 624
VS KSA STK + LE+ PKTN KR + GKE SD KKY +++VG+RVK+WWP D+
Sbjct: 239 VSCDKSASDSTKGAKQPLEKKPKTNTKRIHSLGKEKTSDFKKYDEKIVGSRVKIWWPLDR 298
Query: 625 EFYEGIVDSFDSSSKKHK 642
+YE +V S+ S+ ++H+
Sbjct: 299 AYYEAVVISYCSAKERHR 316
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 195 PIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLSLDDYDDVLASICQD 254
P +VKKD+E V I+RR E+VL + A+++K YL +A +SL + DV+ SIC
Sbjct: 355 PFPPNVKKDDE-VPQISRRQAEQVLSNCASQIKKYLTEAGKLSSVSLANPSDVVDSICGR 413
Query: 255 TSGNLDQNDVTENSKEAEQ 273
L Q DV N KE Q
Sbjct: 414 AFDALKQEDVVANEKEDRQ 432
>AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-912930
FORWARD LENGTH=1321
Length = 1321
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 607 YGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEK--WSIIQ 664
YGDE+VG +V+V+WP DK++Y+G V +D KH V Y+DG++E+L+L KEK W + +
Sbjct: 120 YGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGE 179
Query: 665 DDADSDEEEARGGTS 679
D RG ++
Sbjct: 180 KSGDRFNRLKRGASA 194
>AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 |
chr4:906079-912930 FORWARD LENGTH=1324
Length = 1324
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 607 YGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEK--WSIIQ 664
YGDE+VG +V+V+WP DK++Y+G V +D KH V Y+DG++E+L+L KEK W + +
Sbjct: 120 YGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGE 179
Query: 665 DDADSDEEEARGGTS 679
D RG ++
Sbjct: 180 KSGDRFNRLKRGASA 194
>AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1540
Length = 1540
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 611 LVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSII 663
L+ ++KV+WP D+ +Y G VD FD H V YDD D+E +NL+ E++ I+
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKIL 407
>AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1539
Length = 1539
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 611 LVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSII 663
L+ ++KV+WP D+ +Y G VD FD H V YDD D+E +NL+ E++ I+
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKIL 407
>AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 610 ELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADS 669
+G + KV+WP D +Y G + ++ +K H V Y DGD E L L++EK + D
Sbjct: 219 HFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGDGDGEELALRREKIKFLISRDDM 278
Query: 670 DEEEARGGTS 679
+ + GT+
Sbjct: 279 ELLNMKFGTN 288
>AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 610 ELVGTRVKVWWPEDKEFYEGIVDSFDSSSKKHKVLYDDGDQETLNLKKEKWSIIQDDADS 669
+G + KV+WP D +Y G + ++ +K H V Y DGD E L L++EK + D
Sbjct: 219 HFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGDGDGEELALRREKIKFLISRDDM 278
Query: 670 DEEEARGGTS 679
+ + GT+
Sbjct: 279 ELLNMKFGTN 288