Miyakogusa Predicted Gene
- Lj5g3v0510990.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0510990.2 Non Chatacterized Hit- tr|I1M9E2|I1M9E2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42998
PE,85.4,0,seg,NULL; no description,Zinc finger, RING/FYVE/PHD-type;
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMI,CUFF.53120.2
(553 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 584 e-167
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 150 2e-36
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 144 1e-34
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 140 3e-33
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 135 5e-32
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 135 7e-32
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 132 6e-31
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 130 2e-30
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 130 3e-30
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 129 5e-30
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 129 6e-30
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 125 7e-29
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 125 1e-28
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 123 4e-28
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 112 5e-25
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 96 6e-20
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 92 1e-18
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 92 1e-18
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 86 5e-17
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 86 6e-17
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 85 1e-16
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 85 2e-16
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 84 2e-16
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 84 2e-16
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 84 2e-16
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 84 2e-16
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 84 2e-16
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 82 1e-15
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 82 1e-15
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 77 4e-14
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 75 1e-13
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 74 2e-13
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 74 2e-13
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 69 1e-11
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 69 1e-11
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 69 1e-11
AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 52 7e-07
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 584 bits (1505), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/536 (56%), Positives = 379/536 (70%), Gaps = 19/536 (3%)
Query: 16 NPEPCQHLVDYKLKHGFNGYKAIQNLLVTSPIGRTSVKKPNTAIPRCSFCNGCQGRFYLC 75
NP+PC HL DYKL++G +GYK+ NL R +K IPRCS+C+ Q R Y+C
Sbjct: 10 NPDPCNHLSDYKLRYGTDGYKSFNNLFRCFNDARIKIKLQGIDIPRCSYCSVYQKRLYIC 69
Query: 76 LICSSFSCFDHTLLHPQSESGHAVFVDIERAELYCGVCCDQLYDPDFDQVVMSKHSMG-- 133
LIC S SC H LLH Q GH + +D+ER+ELYC C DQ+YD +FD+VV+SK G
Sbjct: 70 LICRSISCSSHILLHTQLNKGHDIAIDVERSELYCCACIDQVYDSEFDEVVVSKQLFGLG 129
Query: 134 ---GNGSESIGQRLIKRRRLVSGVGLDLGKLKYRFPAEDLRAKSCYPMGLRGLNNLGSTC 190
+G++ + R K+RRL S L +G + D R K +P+GLRGLNNLGSTC
Sbjct: 130 MSVKSGADVVAVRSNKKRRLDSQ--LIIGS-NFLVSPRDRREKWTFPLGLRGLNNLGSTC 186
Query: 191 FMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFSAVYSGDRNPYSP 250
FMN+VLQAL+HAPP R+++LS H D C +RTM +CL CD++ +FSA++SGDR PYSP
Sbjct: 187 FMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMFSGDRTPYSP 246
Query: 251 AQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNGDCQCIAHRVFYG 310
A LYSWWQHS NLA+YEQQD+HEFFIS+LD IHE EGK++ + N +CQCI H+ F G
Sbjct: 247 AHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSKCLYQDNEECQCITHKAFSG 306
Query: 311 LLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGS----MSTLLGC 366
LLRSDVTC CG TSTTYDP +DISL LD+ + + + G S M TL GC
Sbjct: 307 LLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYSGGPSVNAIMPTLSGC 366
Query: 367 LDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKID 426
LD FTR EKLG DQKL CQ+C +++ S KQMSIR+LPL+L LHVKRFEHS +KTSRKID
Sbjct: 367 LDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKTSRKID 426
Query: 427 RYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGD-EPD------MFSEFDIFAVVTHSGT 479
YL +PF L+M+PY+SSSI+ R+GNRIFAF G+ E D +EF+IFAVVTH G
Sbjct: 427 SYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAVVTHKGM 486
Query: 480 LESGHYVTFVRLRKQWYRCDDACITEVDEATVRASQCYMIFYAQKTLQDKANEDLS 535
LESGHYVT++RL+ WYRCDDA I EV+E VR +CYM+FYAQ+T+ KA+++LS
Sbjct: 487 LESGHYVTYLRLKGLWYRCDDAWINEVEEEVVRGCECYMLFYAQETVIQKAHKELS 542
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 167/349 (47%), Gaps = 54/349 (15%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKR-TMDRMCLLCDINAVFSAV 240
GL NLG+TCF+NSVLQ L + P + H QK + C LC I
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAH-----QKYCHVAGFCALCAIQKHVRTA 162
Query: 241 YSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHE---KEGKTRNGSRGN 297
+ +P + + S N + Q+DAHE+ I++L+ +H+ G S +
Sbjct: 163 RQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESS--D 220
Query: 298 GDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGE 357
+ + H++F G LRS V C C S +DP LD+SL++ +K D
Sbjct: 221 AYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-------------SKAD-- 265
Query: 358 GSMSTLLGCLDLFTRPEKLGSDQKLY-CQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHS 416
+L L FT E L + K+Y C+ C+Q+ + KQ+++ K P VL++H+KRFE
Sbjct: 266 ----SLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFE-- 319
Query: 417 FVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTH 476
S KIDR + F ++DM P++S G E ++ ++ ++ V+ H
Sbjct: 320 --AHRSEKIDRKVDFTSAIDMKPFVS---------------GPHEGNL--KYTLYGVLVH 360
Query: 477 SG-TLESGHYVTFVRLRK-QWYRCDDACITEVDEATVRASQCYMIFYAQ 523
G + SGHY FVR WY DD + +V E TV + YM+FY +
Sbjct: 361 YGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 172/350 (49%), Gaps = 57/350 (16%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLS-----DGHCLDACQKRTMDRMCLLCDINAV 236
GL NLG++CF+NSV Q H P + LS HC + + C++ I
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGN-------EFFCVIRAIRYH 229
Query: 237 FSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRG 296
A +R P +P F + S + Y+Q+DAHEF + L+ + E G R RG
Sbjct: 230 IEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL-EICGSDRTSFRG 288
Query: 297 NGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDG 356
+ + VF G L S + C C + S TY+ + +SL ++
Sbjct: 289 D----ITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE----------------- 327
Query: 357 EGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHS 416
+ TL L+ FTR EKL D++L C NC ++ + KQ+ + KLPLV + H+KRF+++
Sbjct: 328 --DVDTLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNN 383
Query: 417 FVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTH 476
+ KI +++ P +D+ PYM + E ++ +++ ++A+V H
Sbjct: 384 GLYM--EKIYKHVKIPLEIDLQPYMRNI---------------QENEVSTKYHLYALVEH 426
Query: 477 SG-TLESGHYVTFVR-LRKQWYRCDDACITEVDEATVRASQCYMIFYAQK 524
G ++ GHY ++VR K W+ DD+ +T +DE V + Y++FYA++
Sbjct: 427 FGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYARE 476
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 50/348 (14%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFSAVY 241
GL N+G++CF N V Q L+ PP YFL H AC K+ C C +
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHS-RACTKK---EQCFTCGFEKLVVKAK 598
Query: 242 SGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHE---KEGKTRNGSRGNG 298
+++P SP L L + +++DAHEF ++D + K +
Sbjct: 599 E-EKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKL 657
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
+ + F G LRS + CM C S + +D+++ +D G
Sbjct: 658 EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID------------------G 699
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+STL L FTR E L + K C +C+ + + K++ I + P VL++ +KRF+
Sbjct: 700 DISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF 759
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
K +++ + FP +LD+ PY+S GG E ++ ++ V+ H
Sbjct: 760 GK----LNKLIRFPETLDLAPYVS---------------GGSEKSH--DYKLYGVIVHLD 798
Query: 479 TLE---SGHYVTFVRLRKQWYRCDDACITEVDEATVRASQCYMIFYAQ 523
+ SGHYV ++R + +WY+ DD+ + D + YM+FYA+
Sbjct: 799 VMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERILTKGAYMLFYAR 846
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 159/350 (45%), Gaps = 53/350 (15%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDI-NAVFSAV 240
GL N G++CF N VLQ L P Y L GH + C++ + C LC+ N + A
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRE-CRR---NDWCFLCEFENHLDRAN 230
Query: 241 YSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHE---FFISMLDAIHEKEGKTRNGSRGN 297
YS R P+SP + NL Q+DAHE F I M+ ++ E
Sbjct: 231 YS--RFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPR 288
Query: 298 GDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGE 357
+ +F GLL+S V C AC S Y+ +D+++ +
Sbjct: 289 AQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEI------------------H 330
Query: 358 GSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSF 417
G +L CLD FT E L D C C + K++SIR P +L++ +KRF+
Sbjct: 331 GDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGR 390
Query: 418 VKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHS 477
K +++I FP + D+ PYMS GG+ D++ ++AV+ H
Sbjct: 391 FGKLNKRI----SFPETFDLGPYMSG--------------GGEGSDVYK---LYAVIVHL 429
Query: 478 GTLES---GHYVTFVR-LRKQWYRCDDACITEVDEATVRASQCYMIFYAQ 523
L + GHY+ +V+ R WYR DD+ + +V+ V + + YM+ Y++
Sbjct: 430 DMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSR 479
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 159/350 (45%), Gaps = 53/350 (15%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDI-NAVFSAV 240
GL N G++CF N VLQ L P Y L GH + C++ + C LC+ N + A
Sbjct: 5 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRE-CRR---NDWCFLCEFENHLDRAN 60
Query: 241 YSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHE---FFISMLDAIHEKEGKTRNGSRGN 297
YS R P+SP + NL Q+DAHE F I M+ ++ E
Sbjct: 61 YS--RFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPR 118
Query: 298 GDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGE 357
+ +F GLL+S V C AC S Y+ +D+++ +
Sbjct: 119 AQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEI------------------H 160
Query: 358 GSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSF 417
G +L CLD FT E L D C C + K++SIR P +L++ +KRF+
Sbjct: 161 GDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGR 220
Query: 418 VKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHS 477
K +++I FP + D+ PYMS GG+ D++ ++AV+ H
Sbjct: 221 FGKLNKRI----SFPETFDLGPYMSG--------------GGEGSDVYK---LYAVIVHL 259
Query: 478 GTLES---GHYVTFVR-LRKQWYRCDDACITEVDEATVRASQCYMIFYAQ 523
L + GHY+ +V+ R WYR DD+ + +V+ V + + YM+ Y++
Sbjct: 260 DMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSR 309
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 58/373 (15%)
Query: 161 LKYRFPAED-LRAKSC--YPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLD 217
LK FP E+ L+ C + + RGL N G++C+ N+VLQ+L P Y L H
Sbjct: 415 LKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRS 474
Query: 218 ACQKRTMDRMCLLCDINA-VFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFF 276
K CL+C++ V SG P S ++ L + + Q+DAHEF
Sbjct: 475 CSGKD----WCLMCELEQHVMMLRESG--GPLSASRILSHMRSINCQIGDGSQEDAHEF- 527
Query: 277 ISMLDAIHEKEGKTRNGSRGNGDCQ----CIAHRVFYGLLRSDVTCMACGFTSTTYDPCL 332
+ +L A + R G D + + +F G LRS V C+ C S Y+ +
Sbjct: 528 LRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIM 587
Query: 333 DISLNLDTNVSLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQN 392
D++L + G + +L L FTRPE L + C C
Sbjct: 588 DLTLEI------------------YGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVR 629
Query: 393 SLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGN 452
+ K++SI + P +L++ +KRF+ KI++ + FP LDM P+M+ +
Sbjct: 630 ARKELSIHEAPNILTIVLKRFQEGRYG----KINKCISFPEMLDMIPFMTRT-------- 677
Query: 453 RIFAFGGDEPDMFSEFDIFAVVTHSGTLE---SGHYVTFVR-LRKQWYRCDDACITEVDE 508
GD P ++ ++AV+ H TL SGHY+++V+ LR WYR DD+ I V
Sbjct: 678 ------GDVPPLYM---LYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPM 728
Query: 509 ATVRASQCYMIFY 521
V + YM+FY
Sbjct: 729 TQVMSEGAYMLFY 741
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 58/369 (15%)
Query: 165 FPAED-LRAKSC--YPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQK 221
FP E+ L+ C + + RGL N G++C+ N+VLQ+L P Y L H K
Sbjct: 423 FPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGK 482
Query: 222 RTMDRMCLLCDINA-VFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISML 280
CL+C++ V SG P S ++ L + + Q+DAHEF + +L
Sbjct: 483 D----WCLMCELEQHVMMLRESG--GPLSASRILSHMRSINCQIGDGSQEDAHEF-LRLL 535
Query: 281 DAIHEKEGKTRNGSRGNGDCQ----CIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISL 336
A + R G D + + +F G LRS V C+ C S Y+ +D++L
Sbjct: 536 VASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTL 595
Query: 337 NLDTNVSLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQ 396
+ G + +L L FTRPE L + C C + K+
Sbjct: 596 EI------------------YGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKE 637
Query: 397 MSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFA 456
+SI + P +L++ +KRF+ KI++ + FP LDM P+M+ +
Sbjct: 638 LSIHEAPNILTIVLKRFQEGRYG----KINKCISFPEMLDMIPFMTRT------------ 681
Query: 457 FGGDEPDMFSEFDIFAVVTHSGTLE---SGHYVTFVR-LRKQWYRCDDACITEVDEATVR 512
GD P ++ ++AV+ H TL SGHY+++V+ LR WYR DD+ I V V
Sbjct: 682 --GDVPPLYM---LYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVM 736
Query: 513 ASQCYMIFY 521
+ YM+FY
Sbjct: 737 SEGAYMLFY 745
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 150/351 (42%), Gaps = 55/351 (15%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDR--MCLLCDINAVFSA 239
GL N G++CF N +LQ L P Y L GH KR R C LC+
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLEKGH------KRECMRNDWCFLCEFQTHVER 222
Query: 240 VYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFF---ISMLDAIHEKEGKTRNGSRG 296
S R P+SP + L Q+DAHEF I M+ ++ E
Sbjct: 223 A-SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPP 281
Query: 297 NGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDG 356
+ +F GLL+S V C C S Y+ +D+ + +
Sbjct: 282 RSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEM------------------ 323
Query: 357 EGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHS 416
G +L CLD FT E L D C C + K+++IR+ P +L++ +KR++
Sbjct: 324 HGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGG 383
Query: 417 FVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTH 476
K +++I FP +LD+ PYMS GGD D++ ++AV+ H
Sbjct: 384 RYGKLNKRI----SFPETLDLNPYMSE--------------GGDGSDVYK---LYAVIVH 422
Query: 477 SGTLES---GHYVTFVR-LRKQWYRCDDACITEVDEATVRASQCYMIFYAQ 523
L + GHY+ +++ WYR DD+ I V+ V + + YM+ Y++
Sbjct: 423 LDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSR 473
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 167/374 (44%), Gaps = 56/374 (14%)
Query: 182 GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFSAVY 241
GL NLG++C+ N+VLQ L P Y + H C+K++ C +C+ +
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHS-KTCRKKSW---CFVCEFEHLILKAR 385
Query: 242 SGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNGDCQ 301
G+ +P SP + L + +L +++DAHEF +D + K + +
Sbjct: 386 GGE-SPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAEET 444
Query: 302 CIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMS 361
+ F G L S + CMAC S + +D+++ +D G +
Sbjct: 445 TLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEID------------------GDIG 486
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L L FT E L + + +C C+ Q + K++ I + P +L++ +KRF+ K
Sbjct: 487 SLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKL 546
Query: 422 SRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTH---SG 478
S+ I HFP LD++PYMS GD P + ++AVV H
Sbjct: 547 SKPI----HFPELLDISPYMSD------------PNHGDHP----VYSLYAVVVHLDAMS 586
Query: 479 TLESGHYVTFVR-LRKQWYRCDDACITEVDEATVRASQCYMIFYAQKT---------LQD 528
TL SGHYV +++ L W++ DD+ + V TV YM+ YA+ + +
Sbjct: 587 TLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRPVSKNGGRKS 646
Query: 529 KANEDLSLLPNSPG 542
K +L+ +P+ G
Sbjct: 647 KQRRNLAAIPSRKG 660
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 53/356 (14%)
Query: 177 PMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCL--DACQKRTMDRMCLLCDIN 234
P+GLR NLG+TC++NSVLQ L PP ++ L+ H D R C C +
Sbjct: 23 PLGLR---NLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVE 79
Query: 235 AVFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR--- 291
+ S D +P + + + Q+DAHEF ++DA H + +
Sbjct: 80 KRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLR 139
Query: 292 -NGSRG-NGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGK 349
NG+ NG+ + +F G L+S V C++CG S D +DISL + + S+ E+
Sbjct: 140 YNGNEPFNGN--SVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKES-- 195
Query: 350 KLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLH 409
L F + E L + K C++C++ + KQMSI + P +L +
Sbjct: 196 -----------------LQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQ 238
Query: 410 VKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFD 469
+KRF F KID+ + F L ++ +MS + D E+
Sbjct: 239 LKRFGGIF----GGKIDKAISFGEILVLSNFMSKA----------------SKDPQPEYK 278
Query: 470 IFAVVTHSG-TLESGHYVTFVRLR-KQWYRCDDACITEVDEATVRASQCYMIFYAQ 523
+F ++ HSG + ESGHY +V+ +WY C+D+ ++ V + + Y++F+++
Sbjct: 279 LFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 159/374 (42%), Gaps = 81/374 (21%)
Query: 176 YPMGLR--GLNNLGSTCFMNSVLQALLHAPPFRD----YFLSDGHCLDACQKRTMDRMCL 229
+P G R G N G+TC+ NSVLQAL PFR+ Y+ S+ DA + + M
Sbjct: 16 FPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEE----NLMTC 71
Query: 230 LCDINAVFSAVYSGDRNP--YSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDA---IH 284
L D+ FS + S + +P +F+ + + SY QDAHEF +L+ I
Sbjct: 72 LADL---FSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDIL 128
Query: 285 EKEGKTR------------------------NGSRGNGDCQCIAHRVFYGLLRSDVTCMA 320
EKE K NG H +F G+L ++ C+
Sbjct: 129 EKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLR 188
Query: 321 CGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQ 380
C + + LD+SL+++ N S+T CL F+ E L ++
Sbjct: 189 CETVTARDETFLDLSLDIEQNSSIT-------------------SCLKNFSSTETLHAED 229
Query: 381 KLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPY 440
K +C C Q + K+M I+K P +L +H+KRF++ +K+ + FP L ++
Sbjct: 230 KFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT 289
Query: 441 MSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGT-LESGHYVTFVRLRKQWYRCD 499
+ EP E+ +FAVV H G+ GHYV+ V+ W D
Sbjct: 290 V-------------------EPYADVEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFD 330
Query: 500 DACITEVDEATVRA 513
D + ++E+ V+
Sbjct: 331 DENVEMIEESAVQT 344
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 52/356 (14%)
Query: 177 PMGL-RGLNNLGSTCFMNSVLQALLHAPPFRDY---FLSDGHCLDACQKRTMDRMCLLCD 232
P G+ GL N G+TCF+ SVLQ H P D F+ C C ++ C++
Sbjct: 158 PTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPC--NCGN---EKFCVMQA 212
Query: 233 INAVFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHE--KEGKT 290
+ + +F + S++ Q+DAHEF S LD + + K
Sbjct: 213 LRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKN 272
Query: 291 RNGSRGNGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKK 350
+ GS + D I VF G L S + C C S T++P L SL ++
Sbjct: 273 QLGSVSSQDLN-IVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE----------- 320
Query: 351 LTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHV 410
++TL L+ FT EKL + +L C NC+++ KQ+ KLP V + H+
Sbjct: 321 --------DVNTLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHL 370
Query: 411 KRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDI 470
KRF + V T KI ++ FP LD++P+MSS +P++ + + +
Sbjct: 371 KRFTNDGV--TMEKIFDHIEFPLELDLSPFMSS---------------NHDPEVSTRYHL 413
Query: 471 FAVVTHSGTLES-GHYVTFVRLRKQ-WYRCDDACITEVDEATVRASQCYMIFYAQK 524
+A V H G + GHY ++VR + W+ DD+ +T + E V + Y++FYA++
Sbjct: 414 YAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYARE 469
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 72/367 (19%)
Query: 176 YPMGLR--GLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDI 233
+P G R G N G+TC+ NSVLQAL PFR+ L A K + L C +
Sbjct: 16 FPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHY----ANNKADAEENLLTC-L 70
Query: 234 NAVFSAVYSGDRNP--YSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR 291
+FS + S + +P +F+ + + SY QDAHEF +L+ + E K
Sbjct: 71 ADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKET 130
Query: 292 NGSRGNGDC----QCIA--------------------HRVFYGLLRSDVTCMACGFTSTT 327
++ + + + IA H++F G+L ++ C+ C +
Sbjct: 131 QATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTAR 190
Query: 328 YDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNC 387
+ LD+SL+++ N S+T CL F+ E L ++ K +C C
Sbjct: 191 DETFLDLSLDIEQNSSIT-------------------SCLKNFSSTETLHAEDKFFCDKC 231
Query: 388 QQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILR 447
Q + K+M I+K P +L +H+KRF++ +K+ + FP L ++ + +
Sbjct: 232 CSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV-- 289
Query: 448 ARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGT-LESGHYVTFVRLRKQWYRCDDACITEV 506
D+ E+ +FAVV H G+ GHYV+ V+ W DD + +
Sbjct: 290 ---------------DI--EYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEII 332
Query: 507 DEATVRA 513
+E+ V+
Sbjct: 333 EESAVQT 339
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 86/381 (22%)
Query: 176 YPMGLR--GLNNLGSTCFMNSVLQ-------ALLHA-------PPFRDYFLSDGHCLDAC 219
+P G R G N G+TC+ NSVLQ ++LH+ PFR+ L A
Sbjct: 16 FPEGERYFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHY----AN 71
Query: 220 QKRTMDRMCLLCDINAVFSAVYSGDRNP--YSPAQFLYSWWQHSANLASYEQQDAHEFFI 277
K + L C + +FS + S + +P +F+ + + SY QDAHEF
Sbjct: 72 NKADAEENLLTC-LADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN 130
Query: 278 SMLDAIHEKEGKTRNGSRGNGDCQ------------------------CIAHRVFYGLLR 313
+L+ + E K ++ + + H++F G+L
Sbjct: 131 YLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILT 190
Query: 314 SDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLLGCLDLFTRP 373
++ C+ C + + LD+SL+++ N S+T CL F+
Sbjct: 191 NETRCLRCETVTARDETFLDLSLDIEQNSSIT-------------------SCLKNFSST 231
Query: 374 EKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPF 433
E L ++ K +C C Q + K+M I+K P +L +H+KRF++ +K+ + FP
Sbjct: 232 ETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPL 291
Query: 434 SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGT-LESGHYVTFVRLR 492
L ++ + + D+ E+ +FAVV H G+ GHYV+ V+
Sbjct: 292 ELKLSNTVDEYV-----------------DI--EYSLFAVVVHVGSGPNHGHYVSLVKSH 332
Query: 493 KQWYRCDDACITEVDEATVRA 513
W DD + ++E+ V+
Sbjct: 333 NHWLFFDDESVEIIEESAVQT 353
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%), Gaps = 21/167 (12%)
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L CL+ F R E L D+ +C C +R+ + K++ + +LP VL +H+KRF S+ +
Sbjct: 769 SLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRF--SYSRSM 826
Query: 422 SRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTL 480
K++ +++FP LD+T Y+++ L +P + ++++A+ H G +
Sbjct: 827 KHKLETFVNFPIHDLDLTKYVANKNL-------------SQPQL---YELYALTNHYGGM 870
Query: 481 ESGHYVTFVRL--RKQWYRCDDACITEVDEATVRASQCYMIFYAQKT 525
SGHY ++L +WY DD+ I+ ++E V++ Y++FY +K+
Sbjct: 871 GSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRKS 917
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 21/186 (11%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
GL GL NLG+TCFMNS +Q L+H P F YF D H Q L +
Sbjct: 315 GLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLR 374
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRN------ 292
+++ R P +P F + + + Y Q D+ E +LD +HE + ++
Sbjct: 375 KLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINS 434
Query: 293 -GSRGNGDCQC--------------IAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLN 337
+ G D + I V G +S + C C S T+DP + +SL
Sbjct: 435 RDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVTFDPFMYLSLP 494
Query: 338 LDTNVS 343
L N +
Sbjct: 495 LQFNTT 500
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 343 SLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKL 402
SL E K TKR E +L CL+ F E LG D YC C++ + ++K++ + +L
Sbjct: 748 SLPEVSKSGTKRPQESV--SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRL 805
Query: 403 PLVLSLHVKRFEHSFVKKTSRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDE 461
P +L +H+KRF +S K K++ Y+ FP +LD++ Y+S + Y
Sbjct: 806 PEILVIHLKRFSYSRFMKN--KLEAYVDFPLDNLDLSSYISYKNGQTTY----------- 852
Query: 462 PDMFSEFDIFAVVTHSGTLESGHYVTFVRL-RKQWYRCDDACITEVDEATVRASQCYMIF 520
+ ++A+ H G++ GHY +V +WY DD+ + ++ + ++ S Y++F
Sbjct: 853 -----RYMLYAISNHYGSMGGGHYTAYVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLF 907
Query: 521 YAQ 523
Y +
Sbjct: 908 YKR 910
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 171 RAKSCYPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDR-MCL 229
+A +GL GL NLG+TCFMNS LQ L H P D+FL + ++ +D + +
Sbjct: 311 KAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLG-----EYSKEINLDNPLGM 365
Query: 230 LCDINAVFS----AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHE 285
+I F ++++ + +P F + + + + Q D+ E +LD +HE
Sbjct: 366 KGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHE 425
Query: 286 KEGKTRN-----GSRGNG--DCQC--------------IAHRVFYGLLRSDVTCMACGFT 324
+ +N G+G D + I V G +S + C C
Sbjct: 426 DLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKV 485
Query: 325 STTYDPCLDISLNL 338
S +DP + +SL L
Sbjct: 486 SVMFDPFMYLSLPL 499
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 343 SLTENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKL 402
SL E K TKR E +L CL+ F E LG D YC C++ + ++K++ + +L
Sbjct: 748 SLPEVSKSGTKRPQESV--SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRL 805
Query: 403 PLVLSLHVKRFEHSFVKKTSRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDE 461
P +L +H+KRF +S K K++ Y+ FP +LD++ Y+S + Y
Sbjct: 806 PEILVIHLKRFSYSRFMKN--KLEAYVDFPLDNLDLSSYISYKNGQTTY----------- 852
Query: 462 PDMFSEFDIFAVVTHSGTLESGHYVTFVRL-RKQWYRCDDACITEVDEATVRASQCYMIF 520
+ ++A+ H G++ GHY +V +WY DD+ + ++ + ++ S Y++F
Sbjct: 853 -----RYMLYAISNHYGSMGGGHYTAYVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLF 907
Query: 521 YAQ 523
Y +
Sbjct: 908 YKR 910
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 171 RAKSCYPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDR-MCL 229
+A +GL GL NLG+TCFMNS LQ L H P D+FL + ++ +D + +
Sbjct: 311 KAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLG-----EYSKEINLDNPLGM 365
Query: 230 LCDINAVFS----AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHE 285
+I F ++++ + +P F + + + + Q D+ E +LD +HE
Sbjct: 366 KGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHE 425
Query: 286 KEGKTRN-----GSRGNG--DCQC--------------IAHRVFYGLLRSDVTCMACGFT 324
+ +N G+G D + I V G +S + C C
Sbjct: 426 DLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKV 485
Query: 325 STTYDPCLDISLNL 338
S +DP + +SL L
Sbjct: 486 SVMFDPFMYLSLPL 499
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 143/366 (39%), Gaps = 63/366 (17%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
G GL N G+TC+MNS+LQ L H P YF + + + L + +
Sbjct: 196 GFVGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDAPTASIPLALQSLFYK 251
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNG 298
Y+ + W S+ Q D E + + + +K G+ G
Sbjct: 252 LQYNDTSVATKELTKSFGW----DTYDSFMQHDVQELNRVLCEKLEDK----MKGTVVEG 303
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
Q ++F G + + C+ + ST + D+ L++
Sbjct: 304 TIQ----KLFEGHHMNYIECINVDYKSTRKESFYDLQLDV-------------------K 340
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+ D + E+L D K + + Q++ K + P VL L +KRFE+ F+
Sbjct: 341 GCKDVYASFDKYVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 399
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
+ T KI+ FP LD+ R R + D+ + + + + +V+ HSG
Sbjct: 400 RDTMVKINDRYEFPLQLDLD----------REDGRYLSPDADK-SVRNLYTLHSVLVHSG 448
Query: 479 TLESGHYVTFVR--LRKQWYRCDDACITEVDEATVRASQCYMIFYAQKTLQDKANEDLSL 536
+ GHY F+R L QWY+ DD +T+ D ++ L+++ + L
Sbjct: 449 GVHGGHYYAFIRPTLSDQWYKFDDERVTKED--------------VKRALEEQYGGEEEL 494
Query: 537 LPNSPG 542
N+PG
Sbjct: 495 PQNNPG 500
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 143/366 (39%), Gaps = 63/366 (17%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
G GL N G+TC+MNS+LQ L H P YF + + + L + +
Sbjct: 195 GFVGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDAPTASIPLALQSLFYK 250
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNG 298
Y+ + W S+ Q D E + + + +K G+ G
Sbjct: 251 LQYNDTSVATKELTKSFGW----DTYDSFMQHDVQELNRVLCEKLEDK----MKGTVVEG 302
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
Q ++F G + + C+ + ST + D+ L++
Sbjct: 303 TIQ----KLFEGHHMNYIECINVDYKSTRKESFYDLQLDV-------------------K 339
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+ D + E+L D K + + Q++ K + P VL L +KRFE+ F+
Sbjct: 340 GCKDVYASFDKYVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 398
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
+ T KI+ FP LD+ R R + D+ + + + + +V+ HSG
Sbjct: 399 RDTMVKINDRYEFPLQLDLD----------REDGRYLSPDADK-SVRNLYTLHSVLVHSG 447
Query: 479 TLESGHYVTFVR--LRKQWYRCDDACITEVDEATVRASQCYMIFYAQKTLQDKANEDLSL 536
+ GHY F+R L QWY+ DD +T+ D ++ L+++ + L
Sbjct: 448 GVHGGHYYAFIRPTLSDQWYKFDDERVTKED--------------VKRALEEQYGGEEEL 493
Query: 537 LPNSPG 542
N+PG
Sbjct: 494 PQNNPG 499
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 22/163 (13%)
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L CL+ F E LG D +C +C++ + + K++ + KLP +L H+KRF +S K
Sbjct: 749 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 808
Query: 422 SRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTL 480
KID +++FP LD++ Y+ + + G ++++AV H G L
Sbjct: 809 --KIDTFVNFPVHDLDLSKYV-----KNKNGQSYL------------YELYAVSNHYGGL 849
Query: 481 ESGHYVTFVRL--RKQWYRCDDACITEVDEATVRASQCYMIFY 521
GHY + +L +WY DD+ ++ V+E+ +R S Y++FY
Sbjct: 850 GGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFY 892
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMC--LLCDINAV 236
GL GL+NLG+TCFMNS LQ L H PP +YFL D D + MC L +
Sbjct: 302 GLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYS--DDINRDNPLGMCGELAIAFGDL 359
Query: 237 FSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR----- 291
++S RN +P F + + + Y Q D+ E +LD +HE K +
Sbjct: 360 LKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 419
Query: 292 ----NGSRGNGDC------------QCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDIS 335
+ SR + + + V G +S + C CG S T+DP + +S
Sbjct: 420 ELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLS 479
Query: 336 LNLDTNVS 343
+ L + ++
Sbjct: 480 VPLPSTLT 487
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 49/331 (14%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
G GL N G+TC+MNS+LQ L H P YF + + + L + +
Sbjct: 197 GFVGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDAPTASIPLALQSLFYK 252
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNG 298
Y+ + W S+ Q D E + + + +K G+ G
Sbjct: 253 LQYNDTSVATKELTKSFGW----DTYDSFMQHDVQELNRVLCEKLEDK----MKGTVVEG 304
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
Q ++F G + + C+ F ST + D+ L++
Sbjct: 305 TIQ----QLFEGHHMNYIECINVDFKSTRKESFYDLQLDV-------------------K 341
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+ D + E+L D K + + Q++ K + P VL L +KRFE+ F+
Sbjct: 342 GCKDVYASFDKYVEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 400
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
+ T KI+ FP LD+ R + + D + + + + +V+ HSG
Sbjct: 401 RDTMVKINDRYEFPLELDLD----------REDGKYLSPDADR-SVRNLYTLHSVLVHSG 449
Query: 479 TLESGHYVTFVR--LRKQWYRCDDACITEVD 507
+ GHY F+R L QWY+ DD +T+ D
Sbjct: 450 GVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 49/331 (14%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
G GL N G+TC+MNS+LQ L H P YF + + + L + +
Sbjct: 197 GFVGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDAPTASIPLALQSLFYK 252
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNG 298
Y+ + W S+ Q D E + + + +K G+ G
Sbjct: 253 LQYNDTSVATKELTKSFGW----DTYDSFMQHDVQELNRVLCEKLEDK----MKGTVVEG 304
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
Q ++F G + + C+ F ST + D+ L++
Sbjct: 305 TIQ----QLFEGHHMNYIECINVDFKSTRKESFYDLQLDV-------------------K 341
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+ D + E+L D K + + Q++ K + P VL L +KRFE+ F+
Sbjct: 342 GCKDVYASFDKYVEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 400
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
+ T KI+ FP LD+ R + + D + + + + +V+ HSG
Sbjct: 401 RDTMVKINDRYEFPLELDLD----------REDGKYLSPDADR-SVRNLYTLHSVLVHSG 449
Query: 479 TLESGHYVTFVR--LRKQWYRCDDACITEVD 507
+ GHY F+R L QWY+ DD +T+ D
Sbjct: 450 GVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 49/331 (14%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
G GL N G+TC+MNS+LQ L H P YF + + + L + +
Sbjct: 196 GFVGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDAPTASIPLALQSLFYK 251
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSRGNG 298
Y+ + W S+ Q D E + + + +K G+ G
Sbjct: 252 LQYNDTSVATKELTKSFGW----DTYDSFMQHDVQELNRVLCEKLEDK----MKGTVVEG 303
Query: 299 DCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEG 358
Q ++F G + + C+ F ST + D+ L++
Sbjct: 304 TIQ----QLFEGHHMNYIECINVDFKSTRKESFYDLQLDV-------------------K 340
Query: 359 SMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFV 418
+ D + E+L D K + + Q++ K + P VL L +KRFE+ F+
Sbjct: 341 GCKDVYASFDKYVEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFM 399
Query: 419 KKTSRKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSG 478
+ T KI+ FP LD+ R + + D + + + + +V+ HSG
Sbjct: 400 RDTMVKINDRYEFPLELDLD----------REDGKYLSPDADR-SVRNLYTLHSVLVHSG 448
Query: 479 TLESGHYVTFVR--LRKQWYRCDDACITEVD 507
+ GHY F+R L QWY+ DD +T+ D
Sbjct: 449 GVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFS 238
GL GL NLG+TCFMNS LQ L H PP +YFL D + R L +
Sbjct: 299 GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLR 358
Query: 239 AVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR------- 291
++S +N +P F + + + Y Q D+ E +LD +HE K +
Sbjct: 359 KLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 418
Query: 292 NGSRGNGDCQCIAHR--------------VFYGLLRSDVTCMACGFTSTTYDPCLDISLN 337
S G D + + VF G +S + C CG S T+DP + +SL
Sbjct: 419 KDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLP 478
Query: 338 L 338
L
Sbjct: 479 L 479
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 23/178 (12%)
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L CL+ F E LG D YC C++ + + K++ + KLP +L H+KRF +S K
Sbjct: 734 SLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKN 793
Query: 422 SRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTL 480
KID ++F LD++ Y+ +E ++++A+ H G L
Sbjct: 794 --KIDTLVNFHIHDLDLSKYVK-----------------NEDGQSYLYELYAISNHYGGL 834
Query: 481 ESGHYVTFVRL--RKQWYRCDDACITEVDEATVRASQCYMIFYAQKTLQDKANEDLSL 536
GHY + +L +WY DD+ ++ V+E+ ++ S Y++FY Q+ D D+ +
Sbjct: 835 GGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFY-QRVKSDSETSDMKM 891
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 22/163 (13%)
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L CL+ F E LG D +C +C++ + + K++ + KLP +L H+KRF +S K
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 422 SRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTL 480
KID +++FP LD++ Y+ ++ D ++++AV H G L
Sbjct: 808 --KIDTFVNFPVHDLDLSKYVK-----------------NKNDQSYLYELYAVSNHYGGL 848
Query: 481 ESGHYVTFVRL--RKQWYRCDDACITEVDEATVRASQCYMIFY 521
GHY + +L +WY DD+ ++ V+E+ ++ S Y++FY
Sbjct: 849 GGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFY 891
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMC--LLCDINAV 236
GL GL+NLG+TCFMNS LQ L H PP +YFL D D + MC L +
Sbjct: 301 GLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYS--DDINRDNPLGMCGELAIAFGDL 358
Query: 237 FSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR----- 291
++S RN +P F + + + Y Q D+ E +LD +HE K +
Sbjct: 359 LKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 418
Query: 292 ----NGSRGNGDC------------QCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDIS 335
+ SR + + + V G +S + C ACG S T+DP + +S
Sbjct: 419 ELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLS 478
Query: 336 LNLDTNVS 343
+ L + ++
Sbjct: 479 VPLPSTLT 486
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 22/163 (13%)
Query: 362 TLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKT 421
+L CL+ F E LG D +C +C++ + + K++ + KLP +L H+KRF +S K
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 422 SRKIDRYLHFPF-SLDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTL 480
KID +++FP LD++ Y+ ++ D ++++AV H G L
Sbjct: 808 --KIDTFVNFPVHDLDLSKYVK-----------------NKNDQSYLYELYAVSNHYGGL 848
Query: 481 ESGHYVTFVRL--RKQWYRCDDACITEVDEATVRASQCYMIFY 521
GHY + +L +WY DD+ ++ V+E+ ++ S Y++FY
Sbjct: 849 GGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFY 891
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 179 GLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMC--LLCDINAV 236
GL GL+NLG+TCFMNS LQ L H PP +YFL D D + MC L +
Sbjct: 301 GLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYS--DDINRDNPLGMCGELAIAFGDL 358
Query: 237 FSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTR----- 291
++S RN +P F + + + Y Q D+ E +LD +HE K +
Sbjct: 359 LKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 418
Query: 292 ----NGSRGNGDC------------QCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDIS 335
+ SR + + + V G +S + C ACG S T+DP + +S
Sbjct: 419 ELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLS 478
Query: 336 LNLDTNVS 343
+ L + ++
Sbjct: 479 VPLPSTLT 486
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 169 DLRAKSCYPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSD-GHCLDACQKRTMDRM 227
D+ A+ Y +RGL NLG+TCF NS++Q LL RD+FL + G + ++ ++
Sbjct: 221 DIEARDGYV--VRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGVGGPLASSLRKL 278
Query: 228 CLLCDINAVFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKE 287
A +V +P F S+ + Y+Q D+HE +LD++ +E
Sbjct: 279 FTETKPEAGLKSV-------INPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEE 331
Query: 288 G---KTRNGSRGNGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISL 336
K R S + + VF G S V+CM CG +S Y+P LD+SL
Sbjct: 332 SALRKKRGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 26/144 (18%)
Query: 390 RQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRAR 449
++++ K++ I K P VL++H+KRF + S K++ ++ F +D+ YM S
Sbjct: 829 KRDATKKVLINKAPPVLTIHLKRFSQDLRGRLS-KLNGHVAFKEVIDLRQYMDSRC---- 883
Query: 450 YGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLESGHYVTFVRLRKQ----------WYRCD 499
G++P ++ + +V HSGT+ GHYV +VR ++ WY
Sbjct: 884 --------SGEDPPVYR---LAGLVEHSGTMRGGHYVAYVRGGQRVKETDSSSTAWYNVS 932
Query: 500 DACITEVDEATVRASQCYMIFYAQ 523
DA + +V V S+ Y++FY +
Sbjct: 933 DAYVRQVSLEKVLHSEAYILFYER 956
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 63/347 (18%)
Query: 166 PAEDLRAKSCYPMGLRGLNNLGSTCFMNSVLQALLHAPPFRD-YFLSDGHCLDACQKRTM 224
P D R P GL NLG+TC+ NS+LQ L FR+ F + H L Q +
Sbjct: 94 PTLDRRDSESTPAGL---TNLGATCYANSILQCLYMNTAFREGVFSVEVHVLK--QNPVL 148
Query: 225 DRMCLLCDINAVFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIH 284
D++ L F+ +++ ++ F+ + L + QQD HEF +
Sbjct: 149 DQIARL------FAQLHASQKSFVDSDAFV-----KTLELDNGVQQDTHEFLTLL--LSL 195
Query: 285 EKEGKTRNGSRGNGDCQCIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSL 344
+ +G + + I +F G + TC CG S D L+ NV
Sbjct: 196 LERCLLHSGVKA----KTIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDF-YALELNVK- 249
Query: 345 TENGKKLTKRDGEGSMSTLLGCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPL 404
+ +L L+ + E+L D + +C +C R ++ + + +R LP
Sbjct: 250 --------------GLKSLDASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPP 295
Query: 405 VLSLHVKRFEHSFVKKTS--RKIDRYLHFPFSLDMTPYMSSSILRARYGNRIFAFGGDEP 462
V++ +KR F+ KT+ +KI FP LDM ++ S N++
Sbjct: 296 VITFQLKRC--IFLPKTTAKKKITSSFSFPQVLDMGSRLAES-----SQNKL-------- 340
Query: 463 DMFSEFDIFAVVTHSGT-LESGHYVTFVRLRKQ--WYRCDDACITEV 506
+D+ AV+ H G+ + SGHYV ++ K W+ DD ++E+
Sbjct: 341 ----TYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSEL 383
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
| chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 170 LRAKSCYPMGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCL 229
+ A+ Y +RGL NLG+TCF NSV+Q LL R++FL + + ++ L
Sbjct: 193 IEARDGY--AVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLSVSGPLVSSLKE--L 248
Query: 230 LCDINAVFSAVYSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGK 289
+ N+ S RN +P +S + Y+Q D+HE +LD + +E
Sbjct: 249 FAESNSEASVF----RNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESS 304
Query: 290 TRN--GSRGNGDCQ-----CIAHRVFYGLLRSDVTCMACGFTSTTYDPCLDISL 336
R G + D + VF G + S V+C+ CG S Y+P +D+SL
Sbjct: 305 LRKKLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSL 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 390 RQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLHFPFSLDMTPYMSSSILRAR 449
++++ K++ I K P VL++H+KRF + S K+ ++ F +D++ YM +
Sbjct: 951 KRDARKKVLINKAPPVLTIHLKRFSQDARGRVS-KLSGHVDFQEFIDLSKYMDTRCSEE- 1008
Query: 450 YGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLESGHYVTFVRLRKQ--------------W 495
DEP + + +V H G + GHYV+++R + W
Sbjct: 1009 ----------DEP----VYRLAGLVEHLGAMSRGHYVSYIRGGHKERRDSDTKEPNSSIW 1054
Query: 496 YRCDDACITEVDEATVRASQCYMIFYAQ 523
Y D+ + V S+ Y++FY +
Sbjct: 1055 YHASDSQVRPASLEEVLRSEAYILFYER 1082
>AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11779063-11781898 REVERSE
LENGTH=541
Length = 541
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 186/461 (40%), Gaps = 70/461 (15%)
Query: 73 YLCLICSSF----SCFDHTLLHPQSESGHAVFVDIERAELYCGVCCDQLYDPDFDQVVMS 128
Y CL+C + S H H E+GH V++++ ++YC ++ DP D +
Sbjct: 140 YACLVCGKYFQGRSQKSHAYTH-SLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI--- 195
Query: 129 KHSMGGNGSESIGQRLIKRRRLVSGVGLDLGKLKYRFPAEDLRAKSCYPMGLRGLNNLGS 188
+H + S + L K R+ + S Y G+ GLNN+
Sbjct: 196 RHVLNPRFSRAQVNELDKNRQWSRALD-----------------GSDYLPGMVGLNNIQK 238
Query: 189 TCFMNSVLQALLHAPPFRDYFLSDGHCLDACQKRTMDRMCLLCDINAVFSAVYSGDRNPY 248
T F+N +Q+L+ P R++FL + C+ + R L ++ A +
Sbjct: 239 TEFVNVTIQSLMRVTPLRNFFLIPEN-YQHCKSPLVHRFGELT--RKIWHA--RNFKGQV 293
Query: 249 SPAQFLYSWWQHSANLASYEQQ-DAHEFFISMLDAIHEKEGKTRNGSRGNGDCQCIAHRV 307
SP +FL + + S QQ D EF +L+ +H R + D I H+
Sbjct: 294 SPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLH-------MDLRTSKDASSIIHKC 346
Query: 308 FYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLLGCL 367
F G L +V G + +IS + L L K E ++ +
Sbjct: 347 FQGEL--EVVKEFQGNENK------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALF 398
Query: 368 DLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRF-EHSFVKKTSRKID 426
DL + + + + + + R +K P L H+ RF +++F K+ + +
Sbjct: 399 DLLKKFDGETVTEVVRPKLARMRYRVIKS------PRYLMFHMVRFKKNNFFKEKNPTL- 451
Query: 427 RYLHFPFS-LDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLESGHY 485
++FP +++ Y+ S+ RA G ++ S++++ A + H G E G++
Sbjct: 452 --VNFPVKDMELRDYI-PSLPRAPEGE----------NVCSKYNLIANIVHDGKPEDGYF 498
Query: 486 VTFVRLRKQ--WYRCDDACITEVDEATVRASQCYMIFYAQK 524
FV+ + Q WY D + E V S+ YM Y Q+
Sbjct: 499 RVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQE 539
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 182/464 (39%), Gaps = 76/464 (16%)
Query: 73 YLCLICSSF----SCFDHTLLHPQSESGHAVFVDIERAELYCGVCCDQLYDPDFDQVVMS 128
Y CL+C + S H H E+GH V++++ ++YC ++ DP D +
Sbjct: 138 YACLVCGKYFQGRSQKSHAYTH-SLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI--- 193
Query: 129 KHSMGGNGSESIGQRLIKRRRLVSGVGLDLGKLKYRFPAEDLRAKSCYPMGLRGLNNLGS 188
+H + S + L K R+ + S Y G+ GLNN+
Sbjct: 194 RHVLNPRFSRAQVNELDKNRQWSRALD-----------------GSDYLPGMVGLNNIQK 236
Query: 189 TCFMNSVLQALLHAPPFRDYFL---SDGHCLDACQKRTMDRMCLLCDINAVFSAVYSGDR 245
T F+N +Q+L+ P R++FL + HC R + + V
Sbjct: 237 TEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQV----- 291
Query: 246 NPYSPAQFLYSWWQHSANLASYEQQ-DAHEFFISMLDAIHEKEGKTRNGSRGNGDCQCIA 304
SP +FL + + S QQ D EF +L+ +H R + D I
Sbjct: 292 ---SPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHM-------DLRTSKDASSII 341
Query: 305 HRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLL 364
H+ F G L +V G + +IS + L L K E ++ +
Sbjct: 342 HKCFQGEL--EVVKEYQGNENK------EISRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 393
Query: 365 GCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRF-EHSFVKKTSR 423
DL + + + + + + R +K P L H+ RF +++F K+ +
Sbjct: 394 ALFDLLKKFDGETVTEVVRPKLARMRYRVIKS------PRYLMFHMVRFKKNNFFKEKNP 447
Query: 424 KIDRYLHFPFS-LDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLES 482
+ ++FP +++ Y+ S+ RA G + S++++ A + H G E
Sbjct: 448 TL---VNFPVKDMELRDYI-PSLPRAPEGENV----------CSKYNLIANIVHDGKPED 493
Query: 483 GHYVTFVRLRKQ--WYRCDDACITEVDEATVRASQCYMIFYAQK 524
G++ FV+ + Q WY D + E V S+ YM Y Q+
Sbjct: 494 GYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQ 537
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 183/464 (39%), Gaps = 76/464 (16%)
Query: 73 YLCLICSSF----SCFDHTLLHPQSESGHAVFVDIERAELYCGVCCDQLYDPDFDQVVMS 128
Y CL+C + S H H E+GH V++++ ++YC ++ DP D +
Sbjct: 109 YACLVCGKYFQGRSQKSHAYTH-SLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI--- 164
Query: 129 KHSMGGNGSESIGQRLIKRRRLVSGVGLDLGKLKYRFPAEDLRAKSCYPMGLRGLNNLGS 188
+H + S + L K R+ + S Y G+ GLNN+
Sbjct: 165 RHVLNPRFSRAQVNELDKNRQWSRALD-----------------GSDYLPGMVGLNNIQK 207
Query: 189 TCFMNSVLQALLHAPPFRDYFL---SDGHCLDACQKRTMDRMCLLCDINAVFSAVYSGDR 245
T F+N +Q+L+ P R++FL + HC R + + V
Sbjct: 208 TEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQV----- 262
Query: 246 NPYSPAQFLYSWWQHSANLASYEQQ-DAHEFFISMLDAIHEKEGKTRNGSRGNGDCQCIA 304
SP +FL + + S QQ D EF +L+ +H R + D I
Sbjct: 263 ---SPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLH-------MDLRTSKDASSII 312
Query: 305 HRVFYGLLRSDVTCMACGFTSTTYDPCLDISLNLDTNVSLTENGKKLTKRDGEGSMSTLL 364
H+ F G L +V G + +IS + L L K E ++ +
Sbjct: 313 HKCFQGEL--EVVKEYQGNENK------EISRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 364
Query: 365 GCLDLFTRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRF-EHSFVKKTSR 423
DL + + + + + + R +K P L H+ RF +++F K+ +
Sbjct: 365 ALFDLLKKFDGETVTEVVRPKLARMRYRVIKS------PRYLMFHMVRFKKNNFFKEKNP 418
Query: 424 KIDRYLHFPFS-LDMTPYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLES 482
+ ++FP +++ Y+ S+ RA G ++ S++++ A + H G E
Sbjct: 419 TL---VNFPVKDMELRDYI-PSLPRAPEGE----------NVCSKYNLIANIVHDGKPED 464
Query: 483 GHYVTFVRLRKQ--WYRCDDACITEVDEATVRASQCYMIFYAQK 524
G++ FV+ + Q WY D + E V S+ YM Y Q+
Sbjct: 465 GYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQ 508
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 154/399 (38%), Gaps = 101/399 (25%)
Query: 181 RGLNNLGSTCFMNSVLQALLHAPPFRDYF----LSDGHCLDACQKRTMDRMCLLCDINAV 236
RGL N G+ CF+N+ LQALL PF L D D+ D+ +
Sbjct: 197 RGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPTLAAFSEFISELDVPSS 256
Query: 237 FS-----AVYSGDRNPYSPAQF---LYSWWQHSANLAS--YEQQDAHEFFISMLDAIHEK 286
S V R P+ PA F L ++ N S Q+DA EF ++D +H++
Sbjct: 257 SSIRNNVTVVEAGR-PFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 287 EGKTRNGS--------------RGNGD-CQCIAHR------------------VFYGLLR 313
K + S +GD + + + +F G L+
Sbjct: 316 LLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLK 375
Query: 314 SDVTCMACGFTSTTYDPCLDISLNLDTN-VSLTENGKKL--TKRDGEGSMSTLLGCLDLF 370
S V S T P L + L++ + V E+ L + D EG +++ G +
Sbjct: 376 SVVKAKGTK-ASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVV 434
Query: 371 TRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLH 430
+ + K + I+KL ++ LH+ RF S+ + S K+ + +
Sbjct: 435 S---------------------ASKSIKIQKLSKIMILHLMRF--SYGSQGSTKLRKGVK 471
Query: 431 FPFSLDMT----PYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLES-GHY 485
FP L++ +S+ LR +++ A +TH G S GHY
Sbjct: 472 FPLELNLNRSHLVSLSNESLR--------------------YELVATITHHGWDPSKGHY 511
Query: 486 VTFVRLRK-QWYRCDDACITEVDEATVRASQCYMIFYAQ 523
T R + QW R DDA +T + V Q Y++FY Q
Sbjct: 512 TTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 154/399 (38%), Gaps = 101/399 (25%)
Query: 181 RGLNNLGSTCFMNSVLQALLHAPPFRDYF----LSDGHCLDACQKRTMDRMCLLCDINAV 236
RGL N G+ CF+N+ LQALL PF L D D+ D+ +
Sbjct: 197 RGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPTLAAFSEFISELDVPSS 256
Query: 237 FS-----AVYSGDRNPYSPAQF---LYSWWQHSANLAS--YEQQDAHEFFISMLDAIHEK 286
S V R P+ PA F L ++ N S Q+DA EF ++D +H++
Sbjct: 257 SSIRNNVTVVEAGR-PFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 287 EGKTRNGS--------------RGNGD-CQCIAHR------------------VFYGLLR 313
K + S +GD + + + +F G L+
Sbjct: 316 LLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLK 375
Query: 314 SDVTCMACGFTSTTYDPCLDISLNLDTN-VSLTENGKKL--TKRDGEGSMSTLLGCLDLF 370
S V S T P L + L++ + V E+ L + D EG +++ G +
Sbjct: 376 SVVKAKGTK-ASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVV 434
Query: 371 TRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLH 430
+ + K + I+KL ++ LH+ RF S+ + S K+ + +
Sbjct: 435 S---------------------ASKSIKIQKLSKIMILHLMRF--SYGSQGSTKLRKGVK 471
Query: 431 FPFSLDMT----PYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLES-GHY 485
FP L++ +S+ LR +++ A +TH G S GHY
Sbjct: 472 FPLELNLNRSHLVSLSNESLR--------------------YELVATITHHGWDPSKGHY 511
Query: 486 VTFVRLRK-QWYRCDDACITEVDEATVRASQCYMIFYAQ 523
T R + QW R DDA +T + V Q Y++FY Q
Sbjct: 512 TTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 154/399 (38%), Gaps = 101/399 (25%)
Query: 181 RGLNNLGSTCFMNSVLQALLHAPPFRDYF----LSDGHCLDACQKRTMDRMCLLCDINAV 236
RGL N G+ CF+N+ LQALL PF L D D+ D+ +
Sbjct: 197 RGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPTLAAFSEFISELDVPSS 256
Query: 237 FS-----AVYSGDRNPYSPAQF---LYSWWQHSANLAS--YEQQDAHEFFISMLDAIHEK 286
S V R P+ PA F L ++ N S Q+DA EF ++D +H++
Sbjct: 257 SSIRNNVTVVEAGR-PFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 287 EGKTRNGS--------------RGNGD-CQCIAHR------------------VFYGLLR 313
K + S +GD + + + +F G L+
Sbjct: 316 LLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLK 375
Query: 314 SDVTCMACGFTSTTYDPCLDISLNLDTN-VSLTENGKKL--TKRDGEGSMSTLLGCLDLF 370
S V S T P L + L++ + V E+ L + D EG +++ G +
Sbjct: 376 SVVKAKGTK-ASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVV 434
Query: 371 TRPEKLGSDQKLYCQNCQQRQNSLKQMSIRKLPLVLSLHVKRFEHSFVKKTSRKIDRYLH 430
+ + K + I+KL ++ LH+ RF S+ + S K+ + +
Sbjct: 435 S---------------------ASKSIKIQKLSKIMILHLMRF--SYGSQGSTKLRKGVK 471
Query: 431 FPFSLDMT----PYMSSSILRARYGNRIFAFGGDEPDMFSEFDIFAVVTHSGTLES-GHY 485
FP L++ +S+ LR +++ A +TH G S GHY
Sbjct: 472 FPLELNLNRSHLVSLSNESLR--------------------YELVATITHHGWDPSKGHY 511
Query: 486 VTFVRLRK-QWYRCDDACITEVDEATVRASQCYMIFYAQ 523
T R + QW R DDA +T + V Q Y++FY Q
Sbjct: 512 TTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11818213-11820135 REVERSE
LENGTH=340
Length = 340
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 73 YLCLICSSF----SCFDHTLLHPQSESGHAVFVDIERAELYCGVCCDQLYDPDFDQVVMS 128
Y CL+C + S H H E+GH V++++ ++YC ++ DP D +
Sbjct: 25 YACLVCGKYFQGRSQKSHAYTH-SLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDI--- 80
Query: 129 KHSMGGNGSESIGQRLIKRRRLVSGVGLDLGKLKYRFPAEDLRAKSCYPMGLRGLNNLGS 188
+H + S + L K R+ + S Y G+ GLNN+
Sbjct: 81 RHVLNPRFSRAQVNELDKNRQWSRALD-----------------GSDYLPGMVGLNNIQK 123
Query: 189 TCFMNSVLQALLHAPPFRDYFLSDGHCLDACQK-RTMDRMCLLCDINAVFSAVYSGDRNP 247
T F+N +Q+L+ P R++F H + Q ++ C ++ A +
Sbjct: 124 TEFVNVTIQSLMRVTPLRNFF----HIPENYQHCKSPLVHCFGELTRKIWHA--RNFKGQ 177
Query: 248 YSPAQFLYSWWQHSANLASYEQQ-DAHEFFISMLDAIHEKEGKTRNGSRGNGDCQCIAHR 306
SP +FL + + S QQ D EF +L+ +H R + D I H+
Sbjct: 178 VSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHM-------DLRTSKDASSIIHK 230
Query: 307 VFYGLL 312
F G L
Sbjct: 231 CFQGEL 236