Miyakogusa Predicted Gene

Lj5g3v0510910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0510910.1 tr|O81977|O81977_SOYBN Rudimentary enhancer
(Fragment) OS=Glycine max PE=2 SV=1,87.1,0.0000007,ERH-like,NULL;
ER,Enhancer of
rudimentary,gene.Ljchr5_pseudomol_20120830.path1.gene1014.1
         (34 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10810.1 | Symbols: ATER, ER | enhancer of rudimentary protei...    49   5e-07

>AT5G10810.1 | Symbols: ATER, ER | enhancer of rudimentary
          protein, putative | chr5:3418897-3420556 REVERSE
          LENGTH=109
          Length = 109

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 3/37 (8%)

Query: 1  MAN---NRHTIILMQTSHNRATRTFMDYASITQAMEA 34
          MAN   +RHTIIL+Q S +RATRTFMDY SI QAM+ 
Sbjct: 1  MANHNSSRHTIILLQNSPSRATRTFMDYDSIGQAMDG 37