Miyakogusa Predicted Gene

Lj5g3v0495880.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0495880.2 Non Chatacterized Hit- tr|I3SNI5|I3SNI5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.22,0,CHORISMATE_MUT_3,Chorismate mutase, AroQ class,
eukaryotic type; SUBFAMILY NOT NAMED,NULL; CHORISMAT,CUFF.53082.2
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10870.1 | Symbols: ATCM2, CM2 | chorismate mutase 2 | chr5:3...   324   3e-89
AT1G69370.1 | Symbols: CM3, cm-3 | chorismate mutase 3 | chr1:26...   268   3e-72
AT3G29200.1 | Symbols: CM1, ATCM1 | chorismate mutase 1 | chr3:1...   258   2e-69

>AT5G10870.1 | Symbols: ATCM2, CM2 | chorismate mutase 2 |
           chr5:3430691-3432272 REVERSE LENGTH=265
          Length = 265

 Score =  324 bits (831), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 160/255 (62%), Positives = 193/255 (75%), Gaps = 2/255 (0%)

Query: 6   SNPGNVYTLESVRKGLVRQEDTIVYGLIDRARFPLNSHTYEENYSKIPGFCGSLVEFVVQ 65
           S   NV +L+ +R+ L+RQEDTIV+ LI+RA+FPLNS  +EE+     G   SL EF V+
Sbjct: 11  SGCSNVLSLDLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSFSSLTEFFVR 70

Query: 66  NTEAVQAKAGRYQNPEENAFFPEHLPLSIVPSYPFTQILHPGAASININKSIWKKYFDEL 125
            TE +QAK GRY+ PEEN FF E++P S+ P++ +   LHP A S+NINK IW  YF EL
Sbjct: 71  ETEIIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKEL 130

Query: 126 LPILVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRAKDREG 185
           LP+ V  GDDGNY  TAASDL+ LQA+SRRIHYGKFVAEVKFR++PQDYEP IRA+DRE 
Sbjct: 131 LPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREA 190

Query: 186 LMKLLTFESVEEMVRKRVEKKAMVFGQDVGLNG--DDEKKVKRKFDPSVASRSYQKWIIP 243
           LMKLLTFE VEEMV+KRV+KKA  FGQ+V  N    DE K K K DP +ASR Y +W+IP
Sbjct: 191 LMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNSGYGDESKKKYKVDPLLASRIYGEWLIP 250

Query: 244 LTKEVQVEYLLRRLD 258
           LTK V+VEYLLRRLD
Sbjct: 251 LTKLVEVEYLLRRLD 265


>AT1G69370.1 | Symbols: CM3, cm-3 | chorismate mutase 3 |
           chr1:26080098-26081559 FORWARD LENGTH=316
          Length = 316

 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 176/246 (71%), Gaps = 1/246 (0%)

Query: 14  LESVRKGLVRQEDTIVYGLIDRARFPLNSHTYEENYSKIPGFCGSLVEFVVQNTEAVQAK 73
           LES+R  L+RQED+I++ L++RA++  N+ TY+E+   + GF GSLVEF+V+ TE + AK
Sbjct: 71  LESIRHSLIRQEDSIIFNLLERAQYRYNADTYDEDAFTMEGFQGSLVEFMVRETEKLHAK 130

Query: 74  AGRYQNPEENAFFPEHLPLSIVPSYPFTQILHPGAASININKSIWKKYFDELLPILVASG 133
             RY++P+E+ FFP+ LP  I+P   + Q+LH  A SININK +W  YF  LLP LV  G
Sbjct: 131 VDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHLLPRLVKPG 190

Query: 134 DDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRAKDREGLMKLLTFE 193
           DDGN    A  D   LQ +S+RIH+GKFVAE KFRE+P  YE  I+ +DR  LM+LLT+E
Sbjct: 191 DDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYE 250

Query: 194 SVEEMVRKRVEKKAMVFGQDVGLNG-DDEKKVKRKFDPSVASRSYQKWIIPLTKEVQVEY 252
           +VEE+V+KRVE KA +FGQD+ +N  + E     K  PS+ ++ Y + I+PLTKEVQ+EY
Sbjct: 251 TVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEY 310

Query: 253 LLRRLD 258
           LLRRLD
Sbjct: 311 LLRRLD 316


>AT3G29200.1 | Symbols: CM1, ATCM1 | chorismate mutase 1 |
           chr3:11164582-11166258 REVERSE LENGTH=340
          Length = 340

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 123/254 (48%), Positives = 176/254 (69%), Gaps = 8/254 (3%)

Query: 13  TLESVRKGLVRQEDTIVYGLIDRARFPLNSHTYEENYSKIPGFCGSLVEFVVQNTEAVQA 72
           TLE +R  L+RQED+I++GL++RA++  N+ TY+     + GF GSLVE++V+ TE + A
Sbjct: 87  TLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNGSLVEYMVKGTEKLHA 146

Query: 73  KAGRYQNPEENAFFPEHLPLSIVPSYPFTQILHPGAASININKSIWKKYFDELLPILVAS 132
           K GR+++P+E+ FFP+ LP  ++P   + ++LH  A SININK IW  YF +L+P LV  
Sbjct: 147 KVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVPRLVKK 206

Query: 133 GDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRAKDREGLMKLLTF 192
           GDDGNY  TA  D   LQ +S+RIHYGKFVAE KF+ SP+ YE  I+A+D++ LM +LTF
Sbjct: 207 GDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTF 266

Query: 193 ESVEEMVRKRVEKKAMVFGQDVGLNGDDEKKVKR--------KFDPSVASRSYQKWIIPL 244
            +VE+ ++KRVE K   +GQ+V +  +++++ +         K  P +    Y  WI+PL
Sbjct: 267 PTVEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPL 326

Query: 245 TKEVQVEYLLRRLD 258
           TKEVQVEYLLRRLD
Sbjct: 327 TKEVQVEYLLRRLD 340