Miyakogusa Predicted Gene
- Lj5g3v0473540.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0473540.3 tr|G7I7J7|G7I7J7_MEDTR Histidine kinase cytokinin
receptor OS=Medicago truncatula GN=MTR_1g013360 PE,80.9,0,HisKA,Signal
transduction histidine kinase, subgroup 1,
dimerisation/phosphoacceptor domain; HATPase,CUFF.53054.3
(303 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 400 e-112
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 117 1e-26
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 99 4e-21
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 99 4e-21
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 99 4e-21
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc... 99 4e-21
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 97 2e-20
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 86 3e-17
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ... 83 2e-16
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina... 69 4e-12
AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B | chr2:81... 60 3e-09
AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kina... 57 1e-08
AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kina... 57 1e-08
AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kina... 55 4e-08
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994... 52 7e-07
AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-1401... 52 7e-07
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 50 2e-06
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 50 2e-06
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/257 (76%), Positives = 224/257 (87%), Gaps = 3/257 (1%)
Query: 1 MEKGLPAKKEITFETELFGSKTFLIYVEPVFSKSGETIGVNYMGMEITDQVRKRERMAKL 60
+EKG +K+EITF T+LFGSKTFLIYVEPV++K+GE IG+NYMGME+TDQV KRE+MAKL
Sbjct: 281 LEKGKASKREITFTTDLFGSKTFLIYVEPVYNKAGEKIGINYMGMEVTDQVVKREKMAKL 340
Query: 61 REEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDRE 120
RE+ AV+KA E+ELNKTIHITEETMRAKQMLATMSHEIRSPLSGVV MAEILSTTKLD+E
Sbjct: 341 REDNAVRKAMESELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVGMAEILSTTKLDKE 400
Query: 121 QKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKM 180
Q+QLLNVM+SSGDLVLQLINDILDLSKVESG M+LEATKFRPREVVKHVLQTAAASL+K
Sbjct: 401 QRQLLNVMISSGDLVLQLINDILDLSKVESGVMRLEATKFRPREVVKHVLQTAAASLKKS 460
Query: 181 LILEGNVEDDIPIEVTGDVLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGH 240
L LEGN+ DD+PIEV GDVLRIRQILTNL+SNA+KFTH+G VGI L V+ EP F +
Sbjct: 461 LTLEGNIADDVPIEVVGDVLRIRQILTNLISNAIKFTHEGNVGIKLQVISEPSFVR---D 517
Query: 241 QKMTADQSTISANGVKE 257
+ AD NG+ E
Sbjct: 518 NALNADTEEHEQNGLTE 534
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 148
Q LAT+SHEIR+P++GV+ M +L T+LD Q+ + +SG ++ LIN++LD +K+
Sbjct: 453 QFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKI 512
Query: 149 ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 207
ESG ++LE +F R ++ VL ++ S QK + L + D +P + GD R RQILT
Sbjct: 513 ESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILT 572
Query: 208 NLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRSR 267
NL+ N++KFT +G + + +++V E F ++G + ++ +ST+S V + R R
Sbjct: 573 NLMGNSIKFTEKGHIFVTVHLVDE-LFESIDG-ETASSPESTLSGLPVAD-------RQR 623
Query: 268 CDQNLDGIKQNDH 280
+N N H
Sbjct: 624 SWENFKAFSSNGH 636
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 148
Q LAT+SHEIR+P++G++ M +L T+L Q+ G ++ LIN++LD +K+
Sbjct: 452 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 511
Query: 149 ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 207
E+G ++LE+ F R ++ VL + S K + L V D +P V GD R RQI+
Sbjct: 512 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 571
Query: 208 NLVSNAVKFTHQGKVGINLYV 228
NLV N+VKFT +G + + +++
Sbjct: 572 NLVGNSVKFTEKGHIFVKVHL 592
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 148
Q LAT+SHEIR+P++G++ M +L T+L Q+ G ++ LIN++LD +K+
Sbjct: 452 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 511
Query: 149 ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 207
E+G ++LE+ F R ++ VL + S K + L V D +P V GD R RQI+
Sbjct: 512 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 571
Query: 208 NLVSNAVKFTHQGKVGINLYV 228
NLV N+VKFT +G + + +++
Sbjct: 572 NLVGNSVKFTEKGHIFVKVHL 592
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 148
Q LAT+SHEIR+P++G++ M +L T+L Q+ G ++ LIN++LD +K+
Sbjct: 475 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 534
Query: 149 ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 207
E+G ++LE+ F R ++ VL + S K + L V D +P V GD R RQI+
Sbjct: 535 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 594
Query: 208 NLVSNAVKFTHQGKVGINLYV 228
NLV N+VKFT +G + + +++
Sbjct: 595 NLVGNSVKFTEKGHIFVKVHL 615
>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal
transduction histidine kinase, hybrid-type, ethylene
sensor | chr1:24734698-24737366 FORWARD LENGTH=738
Length = 738
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Query: 82 EETMRAKQ-MLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLIN 140
E +RA+ LA M+HE+R+P+ +++++ +L T+L EQ+ ++ ++ S +L+ L+N
Sbjct: 338 ETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLMN 397
Query: 141 DILDLSKVESGAMKLEATKFRPREVVKHVLQ-TAAASLQKMLILEGNVEDDIPIEVTGDV 199
D+LDLS++E G+++LE F + + VL ++ K L + N+ D+P V GD
Sbjct: 398 DVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDE 457
Query: 200 LRIRQILTNLVSNAVKFTHQGKVGINLYV 228
R+ QI+ N+V NAVKF+ QG + + V
Sbjct: 458 KRLMQIILNIVGNAVKFSKQGSISVTALV 486
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 148
Q LAT+SHEIR+P++GV+ M ++L T LD +Q SG + LIN++LD +K+
Sbjct: 590 QFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKI 649
Query: 149 ESGAMKLEATKFRPREVVKHV--LQTAAASLQKMLILEGNVEDDIPIEVTGDVLRIRQIL 206
ESG ++LE F R ++ +V L + A+ +K + L V +P V GD R RQI+
Sbjct: 650 ESGRLELENVPFDMRFILDNVSSLLSGKAN-EKGIELAVYVSSQVPDVVVGDPSRFRQII 708
Query: 207 TNLVSNAVKFTHQ-GKVGINLYVVPE 231
TNLV N++KFT + G + I++++ E
Sbjct: 709 TNLVGNSIKFTQERGHIFISVHLADE 734
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 89 QMLATMSHEIRSPLSGVVSMAEIL-STTKLDREQKQLLNVMMSSGDLVLQLINDILDLSK 147
Q LA MSHE+R+P++ V+ + +IL S L EQ + + +L+L+N+ILDLSK
Sbjct: 501 QFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSK 560
Query: 148 VESGAMKLEATKFR-PREVVKHVLQTAAASLQKMLILEGNVEDDIPIEVTGDVLRIRQIL 206
VESG + LE +F RE+ V + + + ++ DD+P V GD R+ QI
Sbjct: 561 VESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIF 620
Query: 207 TNLVSNAVKFTHQGKV 222
NL+SN++KFT G +
Sbjct: 621 ANLISNSIKFTTTGHI 636
>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
chr2:17084635-17086819 REVERSE LENGTH=613
Length = 613
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 40/226 (17%)
Query: 48 TDQVRKR-----ERMAKLREEIAVQKAKETELNKTIHITEETM-------RAKQ------ 89
TD RK E + + +++AV + L +++H ++ M +A+Q
Sbjct: 282 TDGARKWRDHELELVENVADQVAVALSHAAILEESMHARDQLMEQNFALDKARQEAEMAV 341
Query: 90 -----MLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILD 144
LA M+HE+R+P+ ++S++ +L T+L EQ+ ++ ++ S +LV LI+D+LD
Sbjct: 342 HARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNLVATLISDVLD 401
Query: 145 LSKVESGAMKLEATKFRPREVVKHVLQT--AAASLQKM---LILEGNVEDDIPIEVTGDV 199
LS++E G++ LE F + + + V+ AS++K+ LIL D+P GD
Sbjct: 402 LSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSA----DLPTYAIGDE 457
Query: 200 LRIRQILTNLVSNAVKFTHQGKVGI--------NLYVVPEPPFAKV 237
R+ Q + N++ NAVKFT +G + I +L +P P F V
Sbjct: 458 KRLMQTILNIMGNAVKFTKEGYISIIASIMKPESLQELPSPEFFPV 503
>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase
| chr2:19459167-19463122 REVERSE LENGTH=1122
Length = 1122
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 57 MAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEIL-STT 115
M R E+ ++ ++ T ++M Q A SH+IR L+G+ + +I
Sbjct: 366 MQATRREMHMRATLINQMEATQQAERKSMNKSQAFANASHDIRGALAGMKGLIDICRDGV 425
Query: 116 KLDREQKQLLN-VMMSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTA- 173
K + LN V + + DLV L+N +LD+SK+ESG M+L F ++++ V+
Sbjct: 426 KPGSDVDTTLNQVNVCAKDLV-ALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYH 484
Query: 174 AASLQKMLILEGNVEDDIPIE---VTGDVLRIRQILTNLVSNAVKFTHQGKVGINLY 227
+++K + + + D + V GD R++QIL NLVSNAVKFT G + + +
Sbjct: 485 PVAMKKGVDVVLDPHDGSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAW 541
>AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B |
chr2:8140079-8144151 FORWARD LENGTH=1172
Length = 1172
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 59 KLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLD 118
+L++ +AVQ+ ++TE +AK+ LA + I++PLSG+ +L T L+
Sbjct: 910 ELQQALAVQRRQDTEC---------FTKAKE-LAYICQVIKNPLSGMRFANSLLEATDLN 959
Query: 119 REQKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQ 178
+QKQLL +S + +++ D +DL +E G+ L+ +F V+ ++ A L+
Sbjct: 960 EDQKQLLETSVSCEKQISRIVGD-MDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLR 1018
Query: 179 -KMLILEGNVEDDI-PIEVTGDVLRIRQILTNLVSNAVKFT 217
+ L L ++ ++I IEV GD +RI+Q+L + + +++
Sbjct: 1019 DRGLQLIRDIPEEIKSIEVFGDQIRIQQLLAEFLLSIIRYA 1059
>AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 47 ITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQ--MLAT---------MS 95
+ DQV A + EE + + K N+ + +RAKQ M+A+ MS
Sbjct: 323 VADQVAVAISHASVLEESQLMREKLGIQNRAL------LRAKQNAMMASQARNTCQKVMS 376
Query: 96 HEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKL 155
H +R P+ ++ + + + + +QK +++ +M + ++ LIND++D+S ++G L
Sbjct: 377 HGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTSTVLSALINDVIDISPKDNGKSAL 436
Query: 156 EATKFRPREVVKHVLQTA-AASLQKMLILEGNVEDDIPIEVTGDVLRIRQILTNLVSNAV 214
E +F+ +++ A S+ K E +V+ +P V GD R Q++ ++ +
Sbjct: 437 EVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLPNLVVGDEKRTFQLVMYMLGYIL 496
Query: 215 KFTHQGK 221
T GK
Sbjct: 497 DMTDGGK 503
>AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 47 ITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQ--MLAT---------MS 95
+ DQV A + EE + + K N+ + +RAKQ M+A+ MS
Sbjct: 323 VADQVAVAISHASVLEESQLMREKLGIQNRAL------LRAKQNAMMASQARNTCQKVMS 376
Query: 96 HEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKL 155
H +R P+ ++ + + + + +QK +++ +M + ++ LIND++D+S ++G L
Sbjct: 377 HGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTSTVLSALINDVIDISPKDNGKSAL 436
Query: 156 EATKFRPREVVKHVLQTA-AASLQKMLILEGNVEDDIPIEVTGDVLRIRQILTNLVSNAV 214
E +F+ +++ A S+ K E +V+ +P V GD R Q++ ++ +
Sbjct: 437 EVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLPNLVVGDEKRTFQLVMYMLGYIL 496
Query: 215 KFTHQGK 221
T GK
Sbjct: 497 DMTDGGK 503
>AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:8255156-8257560
FORWARD LENGTH=773
Length = 773
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 5 LPAKKEITFETELFGSKTFLIYVEPVFSKSGETIGVNYMGMEI----TDQVRKRERMAKL 60
+P + F EL S L+ V P G Y +EI DQV A +
Sbjct: 283 MPMLRVSDFNGEL--SYAILVCVLP----GGTPRDWTYQEIEIVKVVADQVTVALDHAAV 336
Query: 61 REEIAVQKAKETELNKTIHITE-ETMRAKQ----MLATMSHEIRSPLSGVVSMAEILSTT 115
EE + + K E N+ + + + + +RA Q TMS +R P+ ++ + ++
Sbjct: 337 LEESQLMREKLAEQNRALQMAKRDALRASQARNAFQKTMSEGMRRPMHSILGLLSMIQDE 396
Query: 116 KLDREQKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAA 175
KL EQK +++ M+ +G+++ L+ D +D+ G T+ +P + + + + AA
Sbjct: 397 KLSDEQKMIVDTMVKTGNVMSNLVGDSMDVPDGRFG------TEMKPFSLHRTIHE--AA 448
Query: 176 SLQKMLILEGNV------EDDIPIEVTGDVLRIRQILTNLVSNAVK 215
+ + L L + E +P V GD R+ Q++ ++V + VK
Sbjct: 449 CMARCLCLCNGIRFLVDAEKSLPDNVVGDERRVFQVILHIVGSLVK 494
>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
REVERSE LENGTH=1164
Length = 1164
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 26/177 (14%)
Query: 59 KLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLD 118
+L++ + VQ+ +E+E ++ LA + I++PLSG+ +L L+
Sbjct: 914 ELQQALEVQRRQESEY----------FSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLN 963
Query: 119 REQKQLLNVMMSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQ 178
+QKQLL +S + +++ D +D+ ++ G+ LE T+F V V+ Q
Sbjct: 964 EDQKQLLETSVSCEKQISKIVGD-MDVKSIDDGSFLLERTEFFIGNVTNAVVS------Q 1016
Query: 179 KMLIL-EGNVE--DDIPIE-----VTGDVLRIRQILTNLVSNAVKFT-HQGKVGINL 226
ML++ E N++ +IP E V GD +R++Q+L + + V++ +G V ++L
Sbjct: 1017 VMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAPMEGSVELHL 1073
>AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-14011619
FORWARD LENGTH=1111
Length = 1111
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 91 LATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKVES 150
LA + HE++ P + + ++L ++ L +QK+LL + + + ++I+D D+ +E
Sbjct: 887 LAYLRHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDS-DIEGIEE 945
Query: 151 GAMKLEATKFRPREVVKHVL-QTAAASLQKMLILEGNVEDDIPIEVT-----GDVLRIRQ 204
G ++L+ ++F +E ++ V+ Q S+++ + + D P EV+ GD LR++Q
Sbjct: 946 GYVELDCSEFGLQESLEAVVKQVMELSIERKV----QISCDYPQEVSSMRLYGDNLRLQQ 1001
Query: 205 ILTNLVSNAVKFT 217
IL+ + ++++FT
Sbjct: 1002 ILSETLLSSIRFT 1014
>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3099216 REVERSE LENGTH=1122
Length = 1122
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 25/163 (15%)
Query: 73 ELNKTIHITEETMRAK----QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVM 128
EL + +H+ R + LA + +IR+PLSG++ +++ T+L EQ+++L
Sbjct: 878 ELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQ-- 935
Query: 129 MSSGDLVLQLINDILDLSKVES---GAMKLEATKFRPREVVKHVLQTAAASLQKMLILEG 185
+ L + ++ ILD S +ES G + LE +F EV+ A++ Q M+ G
Sbjct: 936 --TSALCQKQLSKILDDSDLESIIEGCLDLEMKEFTLNEVL------TASTSQVMMKSNG 987
Query: 186 NV--------EDDIPIEVTGDVLRIRQILTNLVSNAVKFTHQG 220
E+ + + GD +R++Q+L + + AV FT G
Sbjct: 988 KSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNFTPSG 1030
>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3098892 REVERSE LENGTH=1014
Length = 1014
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 25/163 (15%)
Query: 73 ELNKTIHITEETMRAK----QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVM 128
EL + +H+ R + LA + +IR+PLSG++ +++ T+L EQ+++L
Sbjct: 770 ELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQ-- 827
Query: 129 MSSGDLVLQLINDILDLSKVES---GAMKLEATKFRPREVVKHVLQTAAASLQKMLILEG 185
+ L + ++ ILD S +ES G + LE +F EV+ A++ Q M+ G
Sbjct: 828 --TSALCQKQLSKILDDSDLESIIEGCLDLEMKEFTLNEVL------TASTSQVMMKSNG 879
Query: 186 NV--------EDDIPIEVTGDVLRIRQILTNLVSNAVKFTHQG 220
E+ + + GD +R++Q+L + + AV FT G
Sbjct: 880 KSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNFTPSG 922