Miyakogusa Predicted Gene

Lj5g3v0473540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0473540.1 tr|G7I7J7|G7I7J7_MEDTR Histidine kinase cytokinin
receptor OS=Medicago truncatula GN=MTR_1g013360 PE,76.57,0,SENSOR
HISTIDINE KINASE DHKB-RELATED,NULL; TWO COMPONENT SIGNAL TRANSDUCTION
PROTEIN-RELATED,NULL; n,CUFF.53054.1
         (633 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch...   427   e-119
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948...   166   6e-41
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   155   1e-37
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   154   1e-37
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom...   154   1e-37
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139...   141   1e-33
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c...   113   4e-25
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc...    98   2e-20
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina...    91   2e-18
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ...    82   1e-15
AT5G26594.1 | Symbols: ARR24, RR24 | response regulator 24 | chr...    65   2e-10
AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B | chr2:81...    57   3e-08
AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kina...    55   1e-07
AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kina...    55   1e-07
AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-1401...    52   1e-06
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994...    51   2e-06

>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
           chr5:3386835-3390541 FORWARD LENGTH=922
          Length = 922

 Score =  427 bits (1098), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/364 (61%), Positives = 257/364 (70%), Gaps = 63/364 (17%)

Query: 1   MRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILD 60
           MRAKQMLATMSHEIRSPLSGVV MAEILSTTKLD+EQ+QLLNVM+SSGDLVLQLINDILD
Sbjct: 365 MRAKQMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILD 424

Query: 61  LSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKMLILEGNVEDDIPIEVTGDVLRIRQ 120
           LSKVESG M+LEATKFRPREVVKHVLQTAAASL+K L LEGN+ DD+PIEV GDVLRIRQ
Sbjct: 425 LSKVESGVMRLEATKFRPREVVKHVLQTAAASLKKSLTLEGNIADDVPIEVVGDVLRIRQ 484

Query: 121 ILTNLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTP 180
           ILTNL+SNA+KFTH+G VGI L V+ EP F +                            
Sbjct: 485 ILTNLISNAIKFTHEGNVGIKLQVISEPSFVR---------------------------- 516

Query: 181 RSRCDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYD 240
                              D+A N +       E   NG TE       T+VWI CDV+D
Sbjct: 517 -------------------DNALNADTE-----EHEQNGLTE-------TSVWICCDVWD 545

Query: 241 TGIGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGST 300
           TGIGIPE ALP LF++YMQ SADHARKYGGTGLGLAICKQLVELMGG+LTV+S+   GST
Sbjct: 546 TGIGIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGST 605

Query: 301 FTFILPYKVSTACENSDDPDDLSDVENSE---DDTTEGFFQFQPRTLGSLFTSNGSSRPK 357
           FTFILPYKV  + + SDD D+ SD+ + +   DDT EG+FQF+P  LGS++++ G     
Sbjct: 606 FTFILPYKVGRSDDYSDDQDEFSDMADQQSEPDDTAEGYFQFKP-LLGSIYSNGGPGISN 664

Query: 358 NILP 361
           + LP
Sbjct: 665 DFLP 668



 Score =  210 bits (534), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 93/145 (64%), Positives = 126/145 (86%)

Query: 488 KPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQHHTYDIILMDVFMPVMNG 547
           KPKILLVEDNKINIMV +SM+K+LG++MD+ NNGVEAI A+   +YD++LMDV MPV++G
Sbjct: 777 KPKILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAINSSSYDLVLMDVCMPVLDG 836

Query: 548 LQTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMTANTLAESAEECF 607
           L+ T+LIRSYEETG+W+AA +AG++ S S +++  + P  R+ I+AMTANTLAES+EEC+
Sbjct: 837 LKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTANTLAESSEECY 896

Query: 608 ANGMDSFVSKPVTFQKLKDCLEKHL 632
           ANGMDSF+SKPVT QKL++CL+++L
Sbjct: 897 ANGMDSFISKPVTLQKLRECLQQYL 921


>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
           chr1:9487780-9492027 FORWARD LENGTH=1036
          Length = 1036

 Score =  166 bits (419), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 163/300 (54%), Gaps = 36/300 (12%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 64
           Q LAT+SHEIR+P++GV+ M  +L  T+LD  Q+  +    +SG  ++ LIN++LD +K+
Sbjct: 453 QFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKI 512

Query: 65  ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 123
           ESG ++LE  +F  R ++  VL   ++ S QK + L   + D +P  + GD  R RQILT
Sbjct: 513 ESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILT 572

Query: 124 NLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRSR 183
           NL+ N++KFT +G + + +++V E  F  ++G +  ++ +ST+S   V +       R R
Sbjct: 573 NLMGNSIKFTEKGHIFVTVHLVDE-LFESIDG-ETASSPESTLSGLPVAD-------RQR 623

Query: 184 CDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDTGI 243
             +N      N H           RS   S   +N               +   V DTG+
Sbjct: 624 SWENFKAFSSNGH-----------RSFEPSPPDIN---------------LIVSVEDTGV 657

Query: 244 GIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTF 303
           GIP +A   +F  +MQV    +R +GGTG+GL+I K LV LM G +  SS    GSTFTF
Sbjct: 658 GIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSTPKVGSTFTF 717



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 15/143 (10%)

Query: 487  LKPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQH-HTYDIILMDVFMPVM 545
            L  KIL+V+DN +N+ V    +K+ G  +    +G++AI  ++  H +D   MD+ MP M
Sbjct: 888  LGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIKAISLLKPPHEFDACFMDIQMPEM 947

Query: 546  NGLQTTKLIRSYEETGHWDAARKAG----IEQSLSASDECPVPPNKRMHIVAMTANTLAE 601
            +G + T+ IR  EE    +   K G    +E     S   PV        +AMTA+ +  
Sbjct: 948  DGFEATRRIRDMEE--EMNKRIKNGEALIVENGNKTSWHLPV--------LAMTADVIQA 997

Query: 602  SAEECFANGMDSFVSKPVTFQKL 624
            + EEC   GMD +VSKP   ++L
Sbjct: 998  THEECLKCGMDGYVSKPFEAEQL 1020


>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-368016
           REVERSE LENGTH=1080
          Length = 1080

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 160/300 (53%), Gaps = 21/300 (7%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 64
           Q LAT+SHEIR+P++G++ M  +L  T+L   Q+         G  ++ LIN++LD +K+
Sbjct: 475 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 534

Query: 65  ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 123
           E+G ++LE+  F  R ++  VL   +  S  K + L   V D +P  V GD  R RQI+ 
Sbjct: 535 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 594

Query: 124 NLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRSR 183
           NLV N+VKFT +G + + +++  +   +K E   K   +       GV EE  + + +S 
Sbjct: 595 NLVGNSVKFTEKGHIFVKVHLAEQ---SKDESEPKNALN------GGVSEEMIVVSKQSS 645

Query: 184 CDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDTGI 243
            +  L G +  D      +F    +  V+ E S++           + V +   + DTGI
Sbjct: 646 YN-TLSGYEAADGRNSWDSF----KHLVSEEQSLS------EFDISSNVRLMVSIEDTGI 694

Query: 244 GIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTF 303
           GIP  A   +F  +MQ  +  +R YGGTG+GL+I K LVELM G++   S+ H GSTF F
Sbjct: 695 GIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWF 754



 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)

Query: 479  SSEVTMSAL--KPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQ-HHTYDI 535
            SS  T+ +L    KIL+V+DN +N  V    +K+ G  +    +G  A+  +Q  HT+D 
Sbjct: 933  SSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFGAEVVCAESGQVALGLLQIPHTFDA 992

Query: 536  ILMDVFMPVMNGLQTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMT 595
              MD+ MP M+G + T+ IR  E+    +   K  +E  L               I+AMT
Sbjct: 993  CFMDIQMPQMDGFEATRQIRMMEK----ETKEKTNLEWHLP--------------ILAMT 1034

Query: 596  ANTLAESAEECFANGMDSFVSKPVTFQKLKDCLEKHLR 633
            A+ +  + EEC  +GMD +VSKP   + L   + K  +
Sbjct: 1035 ADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFK 1072


>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-367429
           REVERSE LENGTH=1057
          Length = 1057

 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 160/300 (53%), Gaps = 21/300 (7%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 64
           Q LAT+SHEIR+P++G++ M  +L  T+L   Q+         G  ++ LIN++LD +K+
Sbjct: 452 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 511

Query: 65  ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 123
           E+G ++LE+  F  R ++  VL   +  S  K + L   V D +P  V GD  R RQI+ 
Sbjct: 512 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 571

Query: 124 NLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRSR 183
           NLV N+VKFT +G + + +++  +   +K E   K   +       GV EE  + + +S 
Sbjct: 572 NLVGNSVKFTEKGHIFVKVHLAEQ---SKDESEPKNALN------GGVSEEMIVVSKQSS 622

Query: 184 CDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDTGI 243
            +  L G +  D      +F    +  V+ E S++           + V +   + DTGI
Sbjct: 623 YN-TLSGYEAADGRNSWDSF----KHLVSEEQSLS------EFDISSNVRLMVSIEDTGI 671

Query: 244 GIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTF 303
           GIP  A   +F  +MQ  +  +R YGGTG+GL+I K LVELM G++   S+ H GSTF F
Sbjct: 672 GIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWF 731



 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)

Query: 479  SSEVTMSAL--KPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQ-HHTYDI 535
            SS  T+ +L    KIL+V+DN +N  V    +K+ G  +    +G  A+  +Q  HT+D 
Sbjct: 910  SSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFGAEVVCAESGQVALGLLQIPHTFDA 969

Query: 536  ILMDVFMPVMNGLQTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMT 595
              MD+ MP M+G + T+ IR  E+    +   K  +E  L               I+AMT
Sbjct: 970  CFMDIQMPQMDGFEATRQIRMMEK----ETKEKTNLEWHLP--------------ILAMT 1011

Query: 596  ANTLAESAEECFANGMDSFVSKPVTFQKLKDCLEKHLR 633
            A+ +  + EEC  +GMD +VSKP   + L   + K  +
Sbjct: 1012 ADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFK 1049


>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
           containing histidine kinase protein | chr2:363332-367429
           REVERSE LENGTH=1057
          Length = 1057

 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 160/300 (53%), Gaps = 21/300 (7%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 64
           Q LAT+SHEIR+P++G++ M  +L  T+L   Q+         G  ++ LIN++LD +K+
Sbjct: 452 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 511

Query: 65  ESGAMKLEATKFRPREVVKHVLQT-AAASLQKMLILEGNVEDDIPIEVTGDVLRIRQILT 123
           E+G ++LE+  F  R ++  VL   +  S  K + L   V D +P  V GD  R RQI+ 
Sbjct: 512 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 571

Query: 124 NLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRSR 183
           NLV N+VKFT +G + + +++  +   +K E   K   +       GV EE  + + +S 
Sbjct: 572 NLVGNSVKFTEKGHIFVKVHLAEQ---SKDESEPKNALN------GGVSEEMIVVSKQSS 622

Query: 184 CDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDTGI 243
            +  L G +  D      +F    +  V+ E S++           + V +   + DTGI
Sbjct: 623 YN-TLSGYEAADGRNSWDSF----KHLVSEEQSLS------EFDISSNVRLMVSIEDTGI 671

Query: 244 GIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTF 303
           GIP  A   +F  +MQ  +  +R YGGTG+GL+I K LVELM G++   S+ H GSTF F
Sbjct: 672 GIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWF 731



 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)

Query: 479  SSEVTMSAL--KPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQ-HHTYDI 535
            SS  T+ +L    KIL+V+DN +N  V    +K+ G  +    +G  A+  +Q  HT+D 
Sbjct: 910  SSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFGAEVVCAESGQVALGLLQIPHTFDA 969

Query: 536  ILMDVFMPVMNGLQTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMT 595
              MD+ MP M+G + T+ IR  E+    +   K  +E  L               I+AMT
Sbjct: 970  CFMDIQMPQMDGFEATRQIRMMEK----ETKEKTNLEWHLP--------------ILAMT 1011

Query: 596  ANTLAESAEECFANGMDSFVSKPVTFQKLKDCLEKHLR 633
            A+ +  + EEC  +GMD +VSKP   + L   + K  +
Sbjct: 1012 ADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFK 1049


>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
           chr5:13911743-13916337 REVERSE LENGTH=1176
          Length = 1176

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 33/302 (10%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKV 64
           Q LAT+SHEIR+P++GV+ M ++L  T LD +Q         SG  +  LIN++LD +K+
Sbjct: 590 QFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKI 649

Query: 65  ESGAMKLEATKFRPREVVKHV--LQTAAASLQKMLILEGNVEDDIPIEVTGDVLRIRQIL 122
           ESG ++LE   F  R ++ +V  L +  A+ +K + L   V   +P  V GD  R RQI+
Sbjct: 650 ESGRLELENVPFDMRFILDNVSSLLSGKAN-EKGIELAVYVSSQVPDVVVGDPSRFRQII 708

Query: 123 TNLVSNAVKFTHQ-GKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPR 181
           TNLV N++KFT + G + I++++  E         + +T + + +       ++ L+   
Sbjct: 709 TNLVGNSIKFTQERGHIFISVHLADEV-------KEPLTIEDAVL-------KQRLALGC 754

Query: 182 SRCDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDT 241
           S   + + G    + +     F   C S+     S N D           + +   V DT
Sbjct: 755 SESGETVSGFPAVNAWGSWKNFKT-CYSTE----SQNSD----------QIKLLVTVEDT 799

Query: 242 GIGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTF 301
           G+GIP  A   +F  +MQ  +  +R YGGTG+GL+I K+LVELM G +   S+   GSTF
Sbjct: 800 GVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGEMGFVSEPGIGSTF 859

Query: 302 TF 303
           +F
Sbjct: 860 SF 861



 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 490  KILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQH-HTYDIILMDVFMPVMNGL 548
            +IL+V+DN +N  V +  +K+ G  +  V +G  A+  ++  H +D   MD+ MP M+G 
Sbjct: 1036 QILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFDACFMDLQMPEMDGF 1095

Query: 549  QTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMTANTLAESAEECFA 608
            + T+ +R  E         K      +SA   C    +  + I+AMTA+ +  + EEC  
Sbjct: 1096 EATRRVRELER-----EINKKIASGEVSAEMFCKFS-SWHVPILAMTADVIQATHEECMK 1149

Query: 609  NGMDSFVSKP 618
             GMD +VSKP
Sbjct: 1150 CGMDGYVSKP 1159


>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
           chr2:7743133-7748013 REVERSE LENGTH=1207
          Length = 1207

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 46/318 (14%)

Query: 5   QMLATMSHEIRSPLSGVVSMAEIL-STTKLDREQKQLLNVMMSSGDLVLQLINDILDLSK 63
           Q LA MSHE+R+P++ V+ + +IL S   L  EQ   +  +      +L+L+N+ILDLSK
Sbjct: 501 QFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSK 560

Query: 64  VESGAMKLEATKF-RPREVVKHVLQTAAASLQKMLILEGNVEDDIPIEVTGDVLRIRQIL 122
           VESG + LE  +F   RE+   V   +   +   +    ++ DD+P  V GD  R+ QI 
Sbjct: 561 VESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIF 620

Query: 123 TNLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEEKHLSTPRS 182
            NL+SN++KFT  G + +  +                       + N + +E  +S  R 
Sbjct: 621 ANLISNSIKFTTTGHIILRGWCE---------------------NINSLHDEMSVSVDRR 659

Query: 183 RCDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTVWIRCDVYDTG 242
           +    +   KQ  H           R+ +   C          ++ +  +W   D  DTG
Sbjct: 660 KPWAPMK-TKQVQH-----------RNHLQKSCK---------NANKMVLWFEVD--DTG 696

Query: 243 IGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFT 302
            GI      ++F  + Q      R +GGTGLGL I + LV  MGG + V  K   G+   
Sbjct: 697 CGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGTLMR 756

Query: 303 FILPYKVSTACENSDDPD 320
             L        + +  PD
Sbjct: 757 LYLILSTPDTVDQNIQPD 774


>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal
           transduction histidine kinase, hybrid-type, ethylene
           sensor | chr1:24734698-24737366 FORWARD LENGTH=738
          Length = 738

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 1   MRAKQ-MLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDIL 59
           +RA+   LA M+HE+R+P+  +++++ +L  T+L  EQ+ ++  ++ S +L+  L+ND+L
Sbjct: 341 IRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLMNDVL 400

Query: 60  DLSKVESGAMKLEATKFRPREVVKHVLQ-TAAASLQKMLILEGNVEDDIPIEVTGDVLRI 118
           DLS++E G+++LE   F    + + VL      ++ K L +  N+  D+P  V GD  R+
Sbjct: 401 DLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRL 460

Query: 119 RQILTNLVSNAVKFTHQGKVGINLYV 144
            QI+ N+V NAVKF+ QG + +   V
Sbjct: 461 MQIILNIVGNAVKFSKQGSISVTALV 486



 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 233 WIRCDVYDTGIGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVS 292
           ++R  V D+G GI  + +P +F ++ Q  +   R  GG+GLGLAI K+ V LM G + + 
Sbjct: 506 YLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIE 565

Query: 293 S 293
           S
Sbjct: 566 S 566



 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 24/139 (17%)

Query: 490 KILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAVQHHTYDIILMDVFMPVMNGLQ 549
           K+L++++N ++ MVT+ ++  LG  +  V++  E +R V H  + ++ MDV MP +   Q
Sbjct: 611 KVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHE-HKVVFMDVCMPGVENYQ 669

Query: 550 TTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHIVAMTANTLAESAEECFAN 609
               +R +E+   +   R                  ++R  +VA++ NT   + E+C + 
Sbjct: 670 IA--LRIHEK---FTKQR------------------HQRPLLVALSGNTDKSTKEKCMSF 706

Query: 610 GMDSFVSKPVTFQKLKDCL 628
           G+D  + KPV+   ++D L
Sbjct: 707 GLDGVLLKPVSLDNIRDVL 725


>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase
           | chr2:19459167-19463122 REVERSE LENGTH=1122
          Length = 1122

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 51/313 (16%)

Query: 1   MRAKQMLATMSHEIRSPLSGVVSMAEILS-TTKLDREQKQLLN-VMMSSGDLVLQLINDI 58
           M   Q  A  SH+IR  L+G+  + +I     K   +    LN V + + DLV  L+N +
Sbjct: 394 MNKSQAFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTTLNQVNVCAKDLV-ALLNSV 452

Query: 59  LDLSKVESGAMKLEATKFRPREVVKHVLQTA-AASLQKMLILEGNVEDDIPIE---VTGD 114
           LD+SK+ESG M+L    F   ++++ V+      +++K + +  +  D    +   V GD
Sbjct: 453 LDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLDPHDGSVFKFSNVRGD 512

Query: 115 VLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPPFAKVEGHQKMTADQSTISANGVKEE 174
             R++QIL NLVSNAVKFT  G + +  +             Q+  ++ S + A      
Sbjct: 513 SGRLKQILNNLVSNAVKFTVDGHIAVRAWA------------QRPGSNSSVVLA------ 554

Query: 175 KHLSTPR--SRCDQNLDGIKQNDHYTQDHAFNDECRSSVNSECSMNGDTEERTHSTETTV 232
              S P+  S+  +++    + +  T +   ++  R++ N                  T+
Sbjct: 555 ---SYPKGVSKFVKSMFCKNKEESSTYETEISNSIRNNAN------------------TM 593

Query: 233 WIRCDVYDTGIGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVS 292
               +V DTG GIP +   ++F  Y+QV  + A+ + GTGLGL I + LV LMGG + ++
Sbjct: 594 EFVFEVDDTGKGIPMEMRKSVFENYVQVR-ETAQGHQGTGLGLGIVQSLVRLMGGEIRIT 652

Query: 293 SKE--HCGSTFTF 303
            K     G+ F F
Sbjct: 653 DKAMGEKGTCFQF 665


>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
           chr2:17084635-17086819 REVERSE LENGTH=613
          Length = 613

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 17/161 (10%)

Query: 6   MLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKVE 65
            LA M+HE+R+P+  ++S++ +L  T+L  EQ+ ++  ++ S +LV  LI+D+LDLS++E
Sbjct: 347 FLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNLVATLISDVLDLSRLE 406

Query: 66  SGAMKLEATKFRPREVVKHV--LQTAAASLQKM---LILEGNVEDDIPIEVTGDVLRIRQ 120
            G++ LE   F  + + + V  L    AS++K+   LIL      D+P    GD  R+ Q
Sbjct: 407 DGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSA----DLPTYAIGDEKRLMQ 462

Query: 121 ILTNLVSNAVKFTHQGKVGI--------NLYVVPEPPFAKV 153
            + N++ NAVKFT +G + I        +L  +P P F  V
Sbjct: 463 TILNIMGNAVKFTKEGYISIIASIMKPESLQELPSPEFFPV 503



 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 228 TETTVWIRCDVYDTGIGIPEKALPNLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGG 287
           +++  ++   V DTG GI  + +P LF +++Q      R + G GLGLA+CK+ V LMGG
Sbjct: 505 SDSHFYLCVQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGG 564

Query: 288 RLTVSSKE-HCGSTFTFIL 305
            + + S+    G T +FI+
Sbjct: 565 YMWIESEGLEKGCTASFII 583


>AT5G26594.1 | Symbols: ARR24, RR24 | response regulator 24 |
           chr5:9269282-9270254 FORWARD LENGTH=139
          Length = 139

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 30/159 (18%)

Query: 474 SRNSISSEV-TMSALKPKILLVEDNKINIMVTQSMVKRLGYSMDVVNNGVEAIRAV-QHH 531
           +R+ ++ E+  ++  K   L+V+D+ +N  + Q ++ RLG   DVV NG EA+       
Sbjct: 2   TRDQVAEELPNLAESKLTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGG 61

Query: 532 TYDIILMDVFMPVMNGLQTTKLIRSYEETGHWDAARKAGIEQSLSASDECPVPPNKRMHI 591
            YD+ILMD+ MP+MNG+Q TK +            R+ GIE                  I
Sbjct: 62  NYDLILMDMDMPIMNGIQATKRL------------REMGIESK----------------I 93

Query: 592 VAMTANTLAESAEECFANGMDSFVSKPVTFQKLKDCLEK 630
             +T        +E    G++ F  KP+T  KL   L K
Sbjct: 94  AGVTTRANEGEKKEFMEAGLNDFQEKPLTISKLLSILHK 132


>AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B |
            chr2:8140079-8144151 FORWARD LENGTH=1172
          Length = 1172

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 4/134 (2%)

Query: 2    RAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDL 61
            +AK+ LA +   I++PLSG+     +L  T L+ +QKQLL   +S    + +++ D +DL
Sbjct: 928  KAKE-LAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGD-MDL 985

Query: 62   SKVESGAMKLEATKFRPREVVKHVLQTAAASLQ-KMLILEGNVEDDIP-IEVTGDVLRIR 119
              +E G+  L+  +F    V+  ++  A   L+ + L L  ++ ++I  IEV GD +RI+
Sbjct: 986  ESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQ 1045

Query: 120  QILTNLVSNAVKFT 133
            Q+L   + + +++ 
Sbjct: 1046 QLLAEFLLSIIRYA 1059


>AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kinase,
           hybrid-type, ethylene sensor | chr3:1235576-1237965
           REVERSE LENGTH=766
          Length = 766

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 1   MRAKQ--MLAT---------MSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGD 49
           +RAKQ  M+A+         MSH +R P+  ++ +  +  +  +  +QK +++ +M +  
Sbjct: 355 LRAKQNAMMASQARNTCQKVMSHGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTST 414

Query: 50  LVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAA-SLQKMLILEGNVEDDIP 108
           ++  LIND++D+S  ++G   LE  +F+   +++     A   S+ K    E +V+  +P
Sbjct: 415 VLSALINDVIDISPKDNGKSALEVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLP 474

Query: 109 IEVTGDVLRIRQILTNLVSNAVKFTHQGK 137
             V GD  R  Q++  ++   +  T  GK
Sbjct: 475 NLVVGDEKRTFQLVMYMLGYILDMTDGGK 503


>AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kinase,
           hybrid-type, ethylene sensor | chr3:1235576-1237965
           REVERSE LENGTH=766
          Length = 766

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 1   MRAKQ--MLAT---------MSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGD 49
           +RAKQ  M+A+         MSH +R P+  ++ +  +  +  +  +QK +++ +M +  
Sbjct: 355 LRAKQNAMMASQARNTCQKVMSHGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTST 414

Query: 50  LVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAA-SLQKMLILEGNVEDDIP 108
           ++  LIND++D+S  ++G   LE  +F+   +++     A   S+ K    E +V+  +P
Sbjct: 415 VLSALINDVIDISPKDNGKSALEVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLP 474

Query: 109 IEVTGDVLRIRQILTNLVSNAVKFTHQGK 137
             V GD  R  Q++  ++   +  T  GK
Sbjct: 475 NLVVGDEKRTFQLVMYMLGYILDMTDGGK 503


>AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-14011619
            FORWARD LENGTH=1111
          Length = 1111

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 77/133 (57%), Gaps = 11/133 (8%)

Query: 7    LATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSKVES 66
            LA + HE++ P   +  + ++L ++ L  +QK+LL   +   + + ++I+D  D+  +E 
Sbjct: 887  LAYLRHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDS-DIEGIEE 945

Query: 67   GAMKLEATKFRPREVVKHVL-QTAAASLQKMLILEGNVEDDIPIEVT-----GDVLRIRQ 120
            G ++L+ ++F  +E ++ V+ Q    S+++ +     +  D P EV+     GD LR++Q
Sbjct: 946  GYVELDCSEFGLQESLEAVVKQVMELSIERKV----QISCDYPQEVSSMRLYGDNLRLQQ 1001

Query: 121  ILTNLVSNAVKFT 133
            IL+  + ++++FT
Sbjct: 1002 ILSETLLSSIRFT 1014


>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
            REVERSE LENGTH=1164
          Length = 1164

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 16/148 (10%)

Query: 4    KQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQKQLLNVMMSSGDLVLQLINDILDLSK 63
            ++ LA +   I++PLSG+     +L    L+ +QKQLL   +S    + +++ D +D+  
Sbjct: 933  RKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGD-MDVKS 991

Query: 64   VESGAMKLEATKFRPREVVKHVLQTAAASLQKMLIL-EGNVE--DDIPIEVT-----GDV 115
            ++ G+  LE T+F    V      T A   Q ML++ E N++   +IP EV      GD 
Sbjct: 992  IDDGSFLLERTEFFIGNV------TNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQ 1045

Query: 116  LRIRQILTNLVSNAVKFT-HQGKVGINL 142
            +R++Q+L   + + V++   +G V ++L
Sbjct: 1046 IRLQQVLAEFLLSIVRYAPMEGSVELHL 1073