Miyakogusa Predicted Gene
- Lj5g3v0471500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0471500.1 Non Chatacterized Hit- tr|I1M9B2|I1M9B2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23573
PE,71.49,0,UCH_2_1,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2, conserved site; SUBFAMILY NOT NAMED,,CUFF.53050.1
(719 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 669 0.0
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 653 0.0
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 547 e-155
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 412 e-115
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 412 e-115
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 378 e-104
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 356 3e-98
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 223 3e-58
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 214 2e-55
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 166 6e-41
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 154 2e-37
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 133 4e-31
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 127 3e-29
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 123 4e-28
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 108 1e-23
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 108 1e-23
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 108 1e-23
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 105 8e-23
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 92 1e-18
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 92 1e-18
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 92 1e-18
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 92 1e-18
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 92 2e-18
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 90 6e-18
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 83 6e-16
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 83 7e-16
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 83 7e-16
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 82 1e-15
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 82 1e-15
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 79 1e-14
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 79 1e-14
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 77 3e-14
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 73 6e-13
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/483 (64%), Positives = 369/483 (76%), Gaps = 8/483 (1%)
Query: 10 DLNWFLQLILYALVICVGLHVLVKNTASKYFE---GEHHSPSASMPGVLAADNAVCTVCS 66
DLN F QLIL + +GL VK TA+KYFE G + +D A C+VC
Sbjct: 9 DLNSFTQLILTLFFVSIGLLYFVKRTAAKYFEVGGGSGGFDRDHRRDFMVSDTAECSVCG 68
Query: 67 AHATRRCSRCKAVRYCSTECQQSHWKSGHNVKCKYSQEATGALNSAQNGVTNRGGFKASR 126
T++CSRCK+VRYCS CQ S WKSGH +KCK +T + ++ + +R
Sbjct: 69 KATTKKCSRCKSVRYCSAACQTSDWKSGHKLKCK-GFRSTDSSPVRRDDIDFEASLFGNR 127
Query: 127 G--KRSGIALVPGFGTSSSRPIKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFA 184
K++ IALVP S S+ +P D LFPY+ FV+++NWD+P PCGL NCGNSCFA
Sbjct: 128 SASKKTRIALVPQ--QSQSKATLKPTDVLFPYESFVRYYNWDRPIMAPCGLTNCGNSCFA 185
Query: 185 NVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERTRQSSQAFSPMNILSRL 244
NVVLQCLS+TRPL+AYLLE+GH+REC NDWCFLCEFE+H++R S FSPMNI+SRL
Sbjct: 186 NVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSRFPFSPMNIISRL 245
Query: 245 PNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQETTLIQHIFGGHLQS 304
PNIGG LGYGRQEDAHE MRF+ID MQSVCL+EFGGEK VPP+ QETTLIQ+IFGG LQS
Sbjct: 246 PNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQS 305
Query: 305 EVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVK 364
+V CT C +S+QYENMMDLTVEIHGDA SLEECLDQFT KEWL GDN YKCD C YVK
Sbjct: 306 QVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVK 365
Query: 365 AWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYKLYAV 424
A KRL+++CAPNILTIALKRFQ G+FGKLNKR++FPET +L PYMS G+GSD+YKLYAV
Sbjct: 366 ACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAV 425
Query: 425 VVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSARRS 484
+VH+DMLNASFFGHYICY+KDF GNWYRIDDS+V V+LE+VLSQ AYMLLYSR R S
Sbjct: 426 IVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRPS 485
Query: 485 SLQ 487
+L+
Sbjct: 486 NLR 488
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/499 (62%), Positives = 382/499 (76%), Gaps = 7/499 (1%)
Query: 10 DLNWFLQLILYALVICVGLHVLVKNTASKYFEGEHHSPSASMPGVLAADNAVCTVCSAHA 69
DL+ F +LI + VG+ +KNTA+KYF+ + +A D C+VC +
Sbjct: 9 DLSVFTRLIATLFFLAVGVFYFLKNTAAKYFDIGAAAAGGFDRDFMAVDAEDCSVCGNFS 68
Query: 70 TRRCSRCKAVRYCSTECQQSHWKSGHNVKCKYSQEATGALNSAQNGVTNRGGFKASR-GK 128
T++CSRCK+VRYCS ECQ+S W SGH C+ T SA+NG+ F+AS G
Sbjct: 69 TKKCSRCKSVRYCSAECQRSDWSSGHQRNCR-DYGITTLTPSAKNGLR----FRASPFGD 123
Query: 129 RSGIALVPGFGTSSSRPIKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVL 188
S ++ ++ +P++ LFPY+EFV++FNWD P PCGL+NCGNSCFANV+L
Sbjct: 124 SSASSIALISERGQNKSSLKPREVLFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVIL 183
Query: 189 QCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERTRQSSQAFSPMNILSRLPNIG 248
QCLS+TRPL+AYLLEKGH+REC NDWCFLCEF++HVER QS FSPMNI+SRL NIG
Sbjct: 184 QCLSWTRPLVAYLLEKGHKRECMRNDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIG 243
Query: 249 GTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQETTLIQHIFGGHLQSEVIC 308
GTLGYGRQEDAHEFMR++ID MQSVCL+EFGGEK VPP+ QETTLIQ+IFGG LQS+V C
Sbjct: 244 GTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQC 303
Query: 309 TKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKR 368
T C+ +S+QYENMMDL VE+HGDA SLEECLDQFT +EWL GDN YKCD C YVKA KR
Sbjct: 304 TVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKR 363
Query: 369 LTVKCAPNILTIALKRFQSGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHI 428
LT++ APNILTIALKR+Q G++GKLNKR++FPETL+L+PYMS+ GDGSD+YKLYAV+VH+
Sbjct: 364 LTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAVIVHL 423
Query: 429 DMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQI 488
DMLNASFFGHYICYIKDF GNWYRIDDS++ SV+LE+VLSQ AYMLLYSR AR SS +
Sbjct: 424 DMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSSCL 483
Query: 489 QTNESSGIAEMHTMDMKPC 507
++ E + T+D + C
Sbjct: 484 RS-EVKDEKKTDTLDTESC 501
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 547 bits (1410), Expect = e-155, Method: Compositional matrix adjust.
Identities = 244/316 (77%), Positives = 276/316 (87%)
Query: 172 PCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERTRQS 231
PCGL NCGNSCFANVVLQCLS+TRPL+AYLLE+GH+REC NDWCFLCEFE+H++R S
Sbjct: 3 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYS 62
Query: 232 SQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQET 291
FSPMNI+SRLPNIGG LGYGRQEDAHE MRF+ID MQSVCL+EFGGEK VPP+ QET
Sbjct: 63 RFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQET 122
Query: 292 TLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLDGD 351
TLIQ+IFGG LQS+V CT C +S+QYENMMDLTVEIHGDA SLEECLDQFT KEWL GD
Sbjct: 123 TLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGD 182
Query: 352 NKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAFPETLNLSPYMSD 411
N YKCD C YVKA KRL+++CAPNILTIALKRFQ G+FGKLNKR++FPET +L PYMS
Sbjct: 183 NLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSG 242
Query: 412 AGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVLSQGA 471
G+GSD+YKLYAV+VH+DMLNASFFGHYICY+KDF GNWYRIDDS+V V+LE+VLSQ A
Sbjct: 243 GGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRA 302
Query: 472 YMLLYSRCSARRSSLQ 487
YMLLYSR R S+L+
Sbjct: 303 YMLLYSRVQPRPSNLR 318
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 245/348 (70%), Gaps = 5/348 (1%)
Query: 153 LFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSC 212
LFPY+EF+KFF + P GL+NCGNSC+AN VLQ L+ T+PL+AYLL + H R CS
Sbjct: 422 LFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG 481
Query: 213 NDWCFLCEFESHVERTRQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQS 272
DWC +CE E HV R+S S ILS + +I +G G QEDAHEF+R + +MQS
Sbjct: 482 KDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQS 541
Query: 273 VCLEEFGGEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDA 332
+CLE GGE V P+LQETTL+QH+FGG L+S+V C +CD S +YEN+MDLT+EI+G
Sbjct: 542 ICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWV 601
Query: 333 ASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGK 392
SL++ L QFT E LDG+N Y+C C GYV+A K L++ APNILTI LKRFQ G++GK
Sbjct: 602 ESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGK 661
Query: 393 LNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
+NK ++FPE L++ P+M+ GD +Y LYAV+VH+D LNASF GHYI Y+KD GNWYR
Sbjct: 662 INKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYR 721
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQIQTNESSGIAEMH 500
IDDS++ V + +V+S+GAYML Y R R Q E +G A +H
Sbjct: 722 IDDSEIHPVPMTQVMSEGAYMLFYMRSYPR-----PQRGEHNGKAPVH 764
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 61 VCTVCSAHATRRCSRCKAVRYCSTECQQSHWKSGHNVKC 99
VC C A RCSRCK+VRYCS +CQ HW+ H +C
Sbjct: 129 VCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDEC 167
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 245/348 (70%), Gaps = 5/348 (1%)
Query: 153 LFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSC 212
LFPY+EF+KFF + P GL+NCGNSC+AN VLQ L+ T+PL+AYLL + H R CS
Sbjct: 418 LFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG 477
Query: 213 NDWCFLCEFESHVERTRQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQS 272
DWC +CE E HV R+S S ILS + +I +G G QEDAHEF+R + +MQS
Sbjct: 478 KDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQS 537
Query: 273 VCLEEFGGEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDA 332
+CLE GGE V P+LQETTL+QH+FGG L+S+V C +CD S +YEN+MDLT+EI+G
Sbjct: 538 ICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWV 597
Query: 333 ASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGK 392
SL++ L QFT E LDG+N Y+C C GYV+A K L++ APNILTI LKRFQ G++GK
Sbjct: 598 ESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGK 657
Query: 393 LNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
+NK ++FPE L++ P+M+ GD +Y LYAV+VH+D LNASF GHYI Y+KD GNWYR
Sbjct: 658 INKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYR 717
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQIQTNESSGIAEMH 500
IDDS++ V + +V+S+GAYML Y R R Q E +G A +H
Sbjct: 718 IDDSEIHPVPMTQVMSEGAYMLFYMRSYPR-----PQRGEHNGKAPVH 760
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 61 VCTVCSAHATRRCSRCKAVRYCSTECQQSHWKSGHNVKC 99
VC C A RCSRCK+VRYCS +CQ HW+ H +C
Sbjct: 129 VCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDEC 167
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/388 (47%), Positives = 252/388 (64%), Gaps = 4/388 (1%)
Query: 103 QEATGALNSAQNGVTNRGGFKASRGKRSGIALVPGFGTSSSRPIKQPKDALFPYKEFVKF 162
Q+ GA+ N + R G KAS K P + + + LFPY+ F K
Sbjct: 475 QKQNGAVVQHINSLHGRSGLKASVLKVVDQWTRPK--SENEMAGRHGHKGLFPYEVFAKL 532
Query: 163 FNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFE 222
+ + K F PCGL+N GNSCFANVV QCL FT PL Y L++ H R C+ + CF C FE
Sbjct: 533 YTY-KIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFE 591
Query: 223 SHVERTRQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEK 282
V + ++ SP +LS+L NIG LG G++EDAHEF+RF +DTMQSVC++ +
Sbjct: 592 KLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDM 651
Query: 283 AVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQF 342
KL++TTLI FGG+L+S++ C KC S E MMDLTVEI GD ++L++ L +F
Sbjct: 652 TKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRF 711
Query: 343 TVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAFPET 402
T E LDG+NKY+C CK Y +A K+L + PN+LTIALKRFQ+GKFGKLNK + FPET
Sbjct: 712 TRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPET 771
Query: 403 LNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVD 462
L+L+PY+S + S YKLY V+VH+D++NA+F GHY+CYI++ WY+ DDS V + D
Sbjct: 772 LDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKADDSTVVTSD 830
Query: 463 LEEVLSQGAYMLLYSRCSARRSSLQIQT 490
+E +L++GAYML Y+RC+ L + T
Sbjct: 831 VERILTKGAYMLFYARCTPTPPRLAVCT 858
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 27/38 (71%)
Query: 62 CTVCSAHATRRCSRCKAVRYCSTECQQSHWKSGHNVKC 99
C VC AT RCSRCKAVRYCS +CQ HW+ GH +C
Sbjct: 74 CPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDEC 111
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 223/330 (67%), Gaps = 5/330 (1%)
Query: 154 FPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCN 213
F Y+ FVK + D+ P GL+N GNSC+AN VLQCL+FTRPLI+YL+ H + C
Sbjct: 311 FSYELFVKLY-CDRVELQPFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKK 369
Query: 214 DWCFLCEFESHVERTRQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSV 273
WCF+CEFE + + R SP+ ILS+L IG LG G++EDAHEF+R ++DTMQSV
Sbjct: 370 SWCFVCEFEHLILKARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSV 429
Query: 274 CLEEFGGEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAA 333
L+E A P +ETTL+ FGG+L S++ C C S + E MMDLTVEI GD
Sbjct: 430 FLKE---APAAGPFAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIG 486
Query: 334 SLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGKL 393
SLEE L QFT E LDG+N+Y C CK Y KA K+L + PNILT+ LKRFQS FGKL
Sbjct: 487 SLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKL 546
Query: 394 NKRVAFPETLNLSPYMSDAGDGSD-IYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
+K + FPE L++SPYMSD G +Y LYAVVVH+D ++ F GHY+CYIK G+W++
Sbjct: 547 SKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFK 606
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRCSAR 482
IDDS V V LE VL +GAYMLLY+R S R
Sbjct: 607 IDDSNVFPVQLETVLLEGAYMLLYARDSPR 636
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 28 LHVLVKNTASKYFEGEHHSPSASMPGVLAADNAVCTVCSAHATRRCSRCKAVRYCSTECQ 87
+ ++ T Y E + G +D C VC T RCS+CK+VRYCS++CQ
Sbjct: 23 IRLIALATEESYLAEEVRPATVDYGGDSVSDVYRCAVCLYPTTTRCSQCKSVRYCSSKCQ 82
Query: 88 QSHWKSGHNVKCK---YSQEATGALNSAQNGVTNRGGFKASRG----KRSGIALVPGFGT 140
HW+ GH +C+ Y +E + S + + F SRG S +++
Sbjct: 83 ILHWRRGHKEECRSPDYDEEKEEYVQSDYDAKESNVDF-PSRGTAYESSSNVSVDVACDM 141
Query: 141 SSSRP 145
S+SRP
Sbjct: 142 STSRP 146
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 184/311 (59%), Gaps = 13/311 (4%)
Query: 173 CGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERTRQSS 232
GL N GN+CF N VLQCL++T PL A L H++ C +C LC + HV RQ++
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQAN 166
Query: 233 -QAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQET 291
+ +P +++S L I RQEDAHE+M I+ ++ C+ + VP + +
Sbjct: 167 GRILAPKDLVSNLRCISRNFRNCRQEDAHEYM---INLLE--CMHKCSLPSGVPSESSDA 221
Query: 292 ---TLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWL 348
+L+ IFGG L+S+V C +C SN+++ +DL+++I A SL+ L +FT E L
Sbjct: 222 YRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELL 280
Query: 349 D-GDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAFPETLNLSP 407
D G Y+C+ CK VKA K+LTV AP +LT+ LKRF++ + K++++V F +++ P
Sbjct: 281 DNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKP 340
Query: 408 YMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVL 467
++S +G+ Y LY V+VH +S GHY C+++ G WY +DD++V V + V
Sbjct: 341 FVSGPHEGNLKYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVF 398
Query: 468 SQGAYMLLYSR 478
+Q AYML Y R
Sbjct: 399 NQKAYMLFYVR 409
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 180/327 (55%), Gaps = 19/327 (5%)
Query: 171 PPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSC------NDWCFLCEFESH 224
PP GL N GN+C+ N VLQCL+FT PL + L H C C C E
Sbjct: 22 PPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKR 81
Query: 225 VERTRQSSQAF-SPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLE----EFG 279
+ R+ +P I S L GRQEDAHEF+R+ ID + L +
Sbjct: 82 IARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYN 141
Query: 280 GEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECL 339
G + ++++ IFGG LQS+V C C SN+ + +MD+++EI ++S++E L
Sbjct: 142 GNEP----FNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEIL-QSSSVKESL 196
Query: 340 DQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFGKLNKRVAF 399
+F E LDG+NKY+C+ C+ V A K++++ APNIL I LKRF GK++K ++F
Sbjct: 197 QKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISF 256
Query: 400 PETLNLSPYMSDAG-DGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKV 458
E L LS +MS A D YKL+ ++VH S GHY Y+KD +G WY +DS V
Sbjct: 257 GEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPES--GHYYAYVKDSLGRWYCCNDSFV 314
Query: 459 RSVDLEEVLSQGAYMLLYSRCSARRSS 485
L+EVLS+ AY+L +SR + R +S
Sbjct: 315 SLSTLQEVLSEKAYILFFSRSNQRPAS 341
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 160/327 (48%), Gaps = 18/327 (5%)
Query: 163 FNWDKPGFPP----CGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCND--WC 216
+W P P GL N GN+CF VLQC + T PLI L + C+C + +C
Sbjct: 149 LSWWYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFC 208
Query: 217 FLCEFESHVERT-RQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCL 275
+ H+E R S + L QEDAHEF++ +D ++ CL
Sbjct: 209 VMQALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCL 268
Query: 276 EEFGGEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASL 335
+ +V Q+ ++ ++FGG L S + C C+ +SN +E + ++EI D +L
Sbjct: 269 DPKNQLGSV--SSQDLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE-DVNTL 325
Query: 336 EECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSG--KFGKL 393
+ L+ FT E L+ ++ CD CK V K+L P + T LKRF + K+
Sbjct: 326 WKALESFTCVEKLE--DQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKI 383
Query: 394 NKRVAFPETLNLSPYMSDAGDG--SDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWY 451
+ FP L+LSP+MS D S Y LYA V HI + + FGHY Y++ W+
Sbjct: 384 FDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGI--RATFGHYSSYVRSAPETWH 441
Query: 452 RIDDSKVRSVDLEEVLSQGAYMLLYSR 478
DDSKV + E VLS+ AY+L Y+R
Sbjct: 442 NFDDSKVTRISEERVLSRPAYILFYAR 468
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 152/316 (48%), Gaps = 20/316 (6%)
Query: 174 GLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCND--WCFLCEFESHVERT-RQ 230
GL N GNSCF N V QC + T PLI LL + C C + +C + H+E R
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRP 236
Query: 231 SSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKLQE 290
+P L +QEDAHEF++ ++ ++ +C G ++ +
Sbjct: 237 ERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-IC----GSDRT---SFRG 288
Query: 291 TTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTVKEWLDG 350
Q +F G L S + C CD +S YE + L++EI D +L L+ FT E LD
Sbjct: 289 DITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKLD- 346
Query: 351 DNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF--GKLNKRVAFPETLNLSPY 408
+ CD C V K+L + P + T LKRF++ K+ K V P ++L PY
Sbjct: 347 -EQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPY 405
Query: 409 MSDAGDG--SDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEV 466
M + + S Y LYA+V H A +GHY Y++ W+ DDSKV +D + V
Sbjct: 406 MRNIQENEVSTKYHLYALVEHFGYSVA--YGHYSSYVRSAPKIWHHFDDSKVTRIDEDMV 463
Query: 467 LSQGAYMLLYSRCSAR 482
LSQ +Y+L Y+R R
Sbjct: 464 LSQDSYILFYAREGTR 479
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 33/316 (10%)
Query: 174 GLLNCGNSCFANVVLQCLSFTRPLIAYLLEK--GHRRECSCNDWCFLCEFESHVERTRQS 231
G N GN+C+ N VLQ L F P LLE ++ + N L + S + ++
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKKK 83
Query: 232 SQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKA------VP 285
+ +P + RL +DAHEF+ + ++ + + +E KA P
Sbjct: 84 TGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSP 143
Query: 286 PKLQET---------------TLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHG 330
K+ T + IF G L +E C +C+ ++ + E +DL+++I
Sbjct: 144 EKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQ 203
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRF----Q 386
++ S+ CL F+ E L ++K+ CD C +A KR+ +K P+IL I LKRF Q
Sbjct: 204 NS-SITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQ 262
Query: 387 SGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF 446
G++ KL+ RV FP L LS + + D Y L+AVVVH+ + GHY+ +K
Sbjct: 263 LGRYKKLSYRVVFPLELKLSNTVDEYVDIE--YSLFAVVVHVG--SGPNHGHYVSLVKS- 317
Query: 447 MGNWYRIDDSKVRSVD 462
+W DD V ++
Sbjct: 318 HNHWLFFDDESVEIIE 333
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 38/321 (11%)
Query: 174 GLLNCGNSCFANVVLQCLSFTRP----LIAYLLEKGHRRECSCNDWCFLCEFESHVERTR 229
G N GN+C+ N VLQ L F P L+ Y + N L + S + +
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83
Query: 230 QSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKA------ 283
+ + +P + RL +DAHEF+ + ++ + + +E K
Sbjct: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETSS 143
Query: 284 --VPPKLQE----------------TTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLT 325
P K+ T + +IF G L +E C +C+ ++ + E +DL+
Sbjct: 144 SSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDLS 203
Query: 326 VEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRF 385
++I ++ S+ CL F+ E L ++K+ CD C +A KR+ +K P+IL I LKRF
Sbjct: 204 LDIEQNS-SITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRF 262
Query: 386 ----QSGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYIC 441
Q G++ KL+ RV FP L LS + D Y L+AVVVH+ + GHY+
Sbjct: 263 KYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVE--YSLFAVVVHVG--SGPNHGHYVS 318
Query: 442 YIKDFMGNWYRIDDSKVRSVD 462
+K +W DD V ++
Sbjct: 319 LVKS-HNHWLFFDDENVEMIE 338
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 148/330 (44%), Gaps = 47/330 (14%)
Query: 174 GLLNCGNSCFANVVLQ--------------CLSFTRPLIAYLLEK--GHRRECSCNDWCF 217
G N GN+C+ N VLQ L F P LLE ++ + N
Sbjct: 24 GFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLLTC 83
Query: 218 LCEFESHVERTRQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEE 277
L + S + ++ + +P + RL +DAHEF+ + ++ + + +E
Sbjct: 84 LADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKE 143
Query: 278 FGGEKA------VPPKLQET---------------TLIQHIFGGHLQSEVICTKCDKISN 316
KA P K+ T + IF G L +E C +C+ ++
Sbjct: 144 TQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTA 203
Query: 317 QYENMMDLTVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPN 376
+ E +DL+++I ++ S+ CL F+ E L ++K+ CD C +A KR+ +K P+
Sbjct: 204 RDETFLDLSLDIEQNS-SITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPH 262
Query: 377 ILTIALKRF----QSGKFGKLNKRVAFPETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLN 432
IL I LKRF Q G++ KL+ RV FP L LS + + D Y L+AVVVH+ +
Sbjct: 263 ILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIE--YSLFAVVVHVG--S 318
Query: 433 ASFFGHYICYIKDFMGNWYRIDDSKVRSVD 462
GHY+ +K +W DD V ++
Sbjct: 319 GPNHGHYVSLVKS-HNHWLFFDDESVEIIE 347
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 146 IKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKG 205
+K P +++ P K+F P GL+N GN CF N LQ L P + LL+K
Sbjct: 181 LKVPTESVPPVKDFT-----------PRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKI 228
Query: 206 HRRECSCNDWCFLC---EFESHVERTRQSS-----------QAFSPMNILSRLPN----- 246
++ D L EF S ++ SS + F P L N
Sbjct: 229 QLQDIPKADSPTLAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDV 288
Query: 247 IGGTLGYGRQEDAHEFMRFSIDTMQSVCLE--------------------EFGGE-KAVP 285
+ G RQEDA EF+ F +D M L+ + G E + V
Sbjct: 289 LNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVG 348
Query: 286 PKLQETTL---------IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAAS-L 335
PK + + IFGG L+S V+ K K S + + L ++IH D +
Sbjct: 349 PKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGVQGI 407
Query: 336 EECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFG--KL 393
E+ L F+ +E L+G + G G V A K + ++ I+ + L RF G G KL
Sbjct: 408 EDALHLFSAQEDLEG-YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 394 NKRVAFPETLNLS-PYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
K V FP LNL+ ++ + S Y+L A + H + GHY + G W R
Sbjct: 467 RKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKNGQWLR 524
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRC 479
DD+ V + + VL AY+L Y +
Sbjct: 525 FDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 146 IKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKG 205
+K P +++ P K+F P GL+N GN CF N LQ L P + LL+K
Sbjct: 181 LKVPTESVPPVKDFT-----------PRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKI 228
Query: 206 HRRECSCNDWCFLC---EFESHVERTRQSS-----------QAFSPMNILSRLPN----- 246
++ D L EF S ++ SS + F P L N
Sbjct: 229 QLQDIPKADSPTLAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDV 288
Query: 247 IGGTLGYGRQEDAHEFMRFSIDTMQSVCLE--------------------EFGGE-KAVP 285
+ G RQEDA EF+ F +D M L+ + G E + V
Sbjct: 289 LNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVG 348
Query: 286 PKLQETTL---------IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAAS-L 335
PK + + IFGG L+S V+ K K S + + L ++IH D +
Sbjct: 349 PKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGVQGI 407
Query: 336 EECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFG--KL 393
E+ L F+ +E L+G + G G V A K + ++ I+ + L RF G G KL
Sbjct: 408 EDALHLFSAQEDLEG-YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 394 NKRVAFPETLNLS-PYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
K V FP LNL+ ++ + S Y+L A + H + GHY + G W R
Sbjct: 467 RKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKNGQWLR 524
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRC 479
DD+ V + + VL AY+L Y +
Sbjct: 525 FDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 146 IKQPKDALFPYKEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKG 205
+K P +++ P K+F P GL+N GN CF N LQ L P + LL+K
Sbjct: 181 LKVPTESVPPVKDFT-----------PRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKI 228
Query: 206 HRRECSCNDWCFLC---EFESHVERTRQSS-----------QAFSPMNILSRLPN----- 246
++ D L EF S ++ SS + F P L N
Sbjct: 229 QLQDIPKADSPTLAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDV 288
Query: 247 IGGTLGYGRQEDAHEFMRFSIDTMQSVCLE--------------------EFGGE-KAVP 285
+ G RQEDA EF+ F +D M L+ + G E + V
Sbjct: 289 LNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVG 348
Query: 286 PKLQETTL---------IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAAS-L 335
PK + + IFGG L+S V+ K K S + + L ++IH D +
Sbjct: 349 PKNKSAVTRTQSFVPSELSEIFGGQLKS-VVKAKGTKASATVQPYLLLHLDIHPDGVQGI 407
Query: 336 EECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKFG--KL 393
E+ L F+ +E L+G + G G V A K + ++ I+ + L RF G G KL
Sbjct: 408 EDALHLFSAQEDLEG-YRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 394 NKRVAFPETLNLS-PYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFMGNWYR 452
K V FP LNL+ ++ + S Y+L A + H + GHY + G W R
Sbjct: 467 RKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSK--GHYTTDARRKNGQWLR 524
Query: 453 IDDSKVRSVDLEEVLSQGAYMLLYSRC 479
DD+ V + + VL AY+L Y +
Sbjct: 525 FDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 155/361 (42%), Gaps = 64/361 (17%)
Query: 174 GLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRREC----SCNDWCFLCEFESHVERTR 229
GL N G++CF N VLQ L PL + L H R+ + C C+ +
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMF 237
Query: 230 QSSQA-FSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKL 288
+ +SP ++L L Q+D+HEF +D + E G K +
Sbjct: 238 SGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIH----ENEGKSKCLYQDN 293
Query: 289 QETTLIQH-IFGGHLQSEVICTKCDKISNQYENMMDLTV--------------------- 326
+E I H F G L+S+V CT C S Y+ +D+++
Sbjct: 294 EECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYSGG 353
Query: 327 -EIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRF 385
++ +L CLD FT E L D K C C ++ K+++++ P +L + +KRF
Sbjct: 354 PSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRF 413
Query: 386 QSGKFGKLNKRV----AFPETLNLSPYMSD------------AGDGSDIY---------- 419
+ K ++++ +P LN+SPY+S A DG Y
Sbjct: 414 EHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSA 473
Query: 420 --KLYAVVVHIDMLNASFFGHYICYIKDFMGNWYRIDDSKVRSVDLEEVLSQGAYMLLYS 477
+++AVV H ML + GHY+ Y++ G WYR DD+ + V+ E V YML Y+
Sbjct: 474 EFEIFAVVTHKGMLES---GHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYMLFYA 529
Query: 478 R 478
+
Sbjct: 530 Q 530
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
++ SL CL+ F +E L D+ + C CK + +A K+L + P+IL LKRF ++
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 391 --GKLNKRVAFP-ETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFM 447
K++ V FP L+LS Y+ + D S +Y+LYAV H L + Y I D
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDD-- 862
Query: 448 GNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQIQTNESS 494
WY DDS V SV+ E+ + AY+L Y R RS + QT E S
Sbjct: 863 NEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV---RSETETQTVEMS 906
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
++ SL CL+ F +E L D+ + C CK + +A K+L + P+IL LKRF ++
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 391 --GKLNKRVAFP-ETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFM 447
K++ V FP L+LS Y+ + D S +Y+LYAV H L + Y I D
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDD-- 862
Query: 448 GNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQIQTNESS 494
WY DDS V SV+ E+ + AY+L Y R RS + QT E S
Sbjct: 863 NEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV---RSETETQTVEMS 906
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
++ SL +CL+ F +E L D+ + C GCK + +A K+L + P IL I LKRF +F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 391 --GKLNKRVAFP-ETLNLSPYMS-DAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF 446
KL V FP + L+LS Y+S G + Y LYA+ H + GHY Y+
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 447 MGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSR 478
WY DDS V + E++ + AY+L Y R
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
++ SL +CL+ F +E L D+ + C GCK + +A K+L + P IL I LKRF +F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 391 --GKLNKRVAFP-ETLNLSPYMS-DAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDF 446
KL V FP + L+LS Y+S G + Y LYA+ H + GHY Y+
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 447 MGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSR 478
WY DDS V + E++ + AY+L Y R
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 33/298 (11%)
Query: 172 PCGLLNCGNSCFANVVLQCLSFTRPLI--AYLLEKGHRRECSCNDWCFLCEFESHV-ERT 228
P GL N G +C+AN +LQCL + +E ++ D + H +++
Sbjct: 105 PAGLTNLGATCYANSILQCLYMNTAFREGVFSVEVHVLKQNPVLDQIARLFAQLHASQKS 164
Query: 229 RQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVPPKL 288
S AF + L L G Q+D HEF+ + ++ G KA
Sbjct: 165 FVDSDAF--VKTLE--------LDNGVQQDTHEFLTLLLSLLERC--LLHSGVKA----- 207
Query: 289 QETTLIQHIFGGHLQSEVICTKCDK---ISNQYENMMDLTVEIHGDAASLEECLDQFTVK 345
T++Q +F G + C+KC + S++ E+ L + + G SL+ L+ +
Sbjct: 208 --KTIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLDASLNDYLSL 264
Query: 346 EWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKR----FQSGKFGKLNKRVAFPE 401
E L+GDN+Y C C V A + + ++ P ++T LKR ++ K+ +FP+
Sbjct: 265 EQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQ 324
Query: 402 TLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKD-FMGNWYRIDDSKV 458
L++ ++++ Y L AV++H +A GHY+ +IKD G W+ DD V
Sbjct: 325 VLDMGSRLAESSQNKLTYDLSAVLIHKG--SAVNSGHYVAHIKDEKTGLWWEFDDEHV 380
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
++ SL CL+ F +E L D+ + C CK + +A K+L + P+IL LKRF ++
Sbjct: 746 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 805
Query: 391 --GKLNKRVAFP-ETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFM 447
K++ V FP L+LS Y+ + S +Y+LYAV H L + Y I D
Sbjct: 806 LKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKLIDD-- 863
Query: 448 GNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSARRSSLQIQTNESS 494
WY DDS V SV+ E+ + AY+L Y R RS + QT E S
Sbjct: 864 NKWYHFDDSHVSSVNESEIRNSAAYVLFYRRV---RSETETQTAEMS 907
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 44/318 (13%)
Query: 169 GFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERT 228
GF GL N G +C+ N +LQ L I Y + + + ND + +
Sbjct: 197 GF--VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDAP-----TASIPLA 245
Query: 229 RQS---SQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVP 285
QS ++ ++ ++ + + G+ + FM+ + + V E+
Sbjct: 246 LQSLFYKLQYNDTSVATK--ELTKSFGWDTYDS---FMQHDVQELNRVLCEKLED----- 295
Query: 286 PKLQETTL---IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQF 342
K++ T + IQ +F GH + + C D S + E+ DL +++ G + D++
Sbjct: 296 -KMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKY 353
Query: 343 TVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQ----SGKFGKLNKRVA 398
E L+GDNKY +G G A K + P +L + LKRF+ K+N R
Sbjct: 354 VEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 412
Query: 399 FPETLNLS----PYMSDAGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKDFMGN-WY 451
FP L+L Y+S D S ++Y L++V+VH ++ GHY +I+ + + WY
Sbjct: 413 FPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWY 469
Query: 452 RIDDSKVRSVDLEEVLSQ 469
+ DD +V DL+ L +
Sbjct: 470 KFDDERVTKEDLKRALEE 487
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 44/318 (13%)
Query: 169 GFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERT 228
GF GL N G +C+ N +LQ L I Y + + + ND + +
Sbjct: 197 GF--VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDAP-----TASIPLA 245
Query: 229 RQS---SQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVP 285
QS ++ ++ ++ + + G+ + FM+ + + V E+
Sbjct: 246 LQSLFYKLQYNDTSVATK--ELTKSFGWDTYDS---FMQHDVQELNRVLCEKLED----- 295
Query: 286 PKLQETTL---IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQF 342
K++ T + IQ +F GH + + C D S + E+ DL +++ G + D++
Sbjct: 296 -KMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKY 353
Query: 343 TVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQ----SGKFGKLNKRVA 398
E L+GDNKY +G G A K + P +L + LKRF+ K+N R
Sbjct: 354 VEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 412
Query: 399 FPETLNLS----PYMSDAGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKDFMGN-WY 451
FP L+L Y+S D S ++Y L++V+VH ++ GHY +I+ + + WY
Sbjct: 413 FPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWY 469
Query: 452 RIDDSKVRSVDLEEVLSQ 469
+ DD +V DL+ L +
Sbjct: 470 KFDDERVTKEDLKRALEE 487
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 44/318 (13%)
Query: 169 GFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERT 228
GF GL N G +C+ N +LQ L I Y + + + ND + +
Sbjct: 196 GF--VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDAP-----TASIPLA 244
Query: 229 RQS---SQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLEEFGGEKAVP 285
QS ++ ++ ++ + + G+ + FM+ + + V E+
Sbjct: 245 LQSLFYKLQYNDTSVATK--ELTKSFGWDTYDS---FMQHDVQELNRVLCEKLED----- 294
Query: 286 PKLQETTL---IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQF 342
K++ T + IQ +F GH + + C D S + E+ DL +++ G + D++
Sbjct: 295 -KMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKY 352
Query: 343 TVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQ----SGKFGKLNKRVA 398
E L+GDNKY +G G A K + P +L + LKRF+ K+N R
Sbjct: 353 VEVERLEGDNKYHAEG-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 411
Query: 399 FPETLNLS----PYMSDAGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKDFMGN-WY 451
FP L+L Y+S D S ++Y L++V+VH ++ GHY +I+ + + WY
Sbjct: 412 FPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWY 468
Query: 452 RIDDSKVRSVDLEEVLSQ 469
+ DD +V DL+ L +
Sbjct: 469 KFDDERVTKEDLKRALEE 486
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 365 AWKRLTVKCAPNILTIALKRFQS---GKFGKLNKRVAFPETLNLSPYMSDAGDGSD--IY 419
A K++ + AP +LTI LKRF G+ KLN VAF E ++L YM G D +Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 420 KLYAVVVHIDMLNASFFGHYICYIKDFM---------GNWYRIDDSKVRSVDLEEVLSQG 470
+L +V H + GHY+ Y++ WY + D+ VR V LE+VL
Sbjct: 892 RLAGLVEHSGTMRG---GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 471 AYMLLYSR 478
AY+L Y R
Sbjct: 949 AYILFYER 956
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 331 DAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQSGKF 390
+ SL CL+ F +E L D+ + C GCK + +A K+L + P+IL LKRF ++
Sbjct: 731 EGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 790
Query: 391 --GKLNKRVAFP-ETLNLSPYMSDAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFM 447
K++ V F L+LS Y+ + S +Y+LYA+ H L HY Y K M
Sbjct: 791 FKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGG---HYTAYAK-LM 846
Query: 448 G--NWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCSA 481
WY DDS+V +V+ E+ + AY+L Y R +
Sbjct: 847 DETKWYNFDDSRVSAVNESEIKTSAAYVLFYQRVKS 882
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 174 GLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWC-----FLCEFESHVERT 228
GL N GN+CF N LQCL+ T P++ Y L+ +R + + + F + +
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQD-YRSDINAKNPLGMRGELAIAFGELLRKL 360
Query: 229 RQSSQ-AFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCL------------ 275
S Q +P ++L Q D+ E + F +D +
Sbjct: 361 WSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEAKD 420
Query: 276 ------EEFGGEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEI 328
+E EK K + ++I +F G +S ++C C KIS ++ M L++ +
Sbjct: 421 SDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLPL 479
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 46/319 (14%)
Query: 169 GFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERT 228
GF GL N G +C+ N +LQ L I Y + + + ND + +
Sbjct: 195 GF--VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDAP-----TASIPLA 243
Query: 229 RQS---SQAFSPMNILSRLPNIGGTLGYGRQEDAHE-FMRFSIDTMQSVCLEEFGGEKAV 284
QS ++ ++ ++ + + G+ D ++ FM+ + + V E+
Sbjct: 244 LQSLFYKLQYNDTSVATK--ELTKSFGW----DTYDSFMQHDVQELNRVLCEKLED---- 293
Query: 285 PPKLQETTL---IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQ 341
K++ T + IQ +F GH + + C D S + E+ DL +++ G + D+
Sbjct: 294 --KMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDK 350
Query: 342 FTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQ----SGKFGKLNKRV 397
+ E L+GDNKY +G A K + P +L + LKRF+ K+N R
Sbjct: 351 YVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 409
Query: 398 AFPETLNLS----PYMSDAGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKDFMGN-W 450
FP L+L Y+S D S ++Y L++V+VH ++ GHY +I+ + + W
Sbjct: 410 EFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQW 466
Query: 451 YRIDDSKVRSVDLEEVLSQ 469
Y+ DD +V D++ L +
Sbjct: 467 YKFDDERVTKEDVKRALEE 485
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 46/319 (14%)
Query: 169 GFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVERT 228
GF GL N G +C+ N +LQ L I Y + + + ND + +
Sbjct: 196 GF--VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDAP-----TASIPLA 244
Query: 229 RQS---SQAFSPMNILSRLPNIGGTLGYGRQEDAHE-FMRFSIDTMQSVCLEEFGGEKAV 284
QS ++ ++ ++ + + G+ D ++ FM+ + + V E+
Sbjct: 245 LQSLFYKLQYNDTSVATK--ELTKSFGW----DTYDSFMQHDVQELNRVLCEKLED---- 294
Query: 285 PPKLQETTL---IQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQ 341
K++ T + IQ +F GH + + C D S + E+ DL +++ G + D+
Sbjct: 295 --KMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDK 351
Query: 342 FTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKRFQ----SGKFGKLNKRV 397
+ E L+GDNKY +G A K + P +L + LKRF+ K+N R
Sbjct: 352 YVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRY 410
Query: 398 AFPETLNLS----PYMSDAGDGS--DIYKLYAVVVHIDMLNASFFGHYICYIKDFMGN-W 450
FP L+L Y+S D S ++Y L++V+VH ++ GHY +I+ + + W
Sbjct: 411 EFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQW 467
Query: 451 YRIDDSKVRSVDLEEVLSQ 469
Y+ DD +V D++ L +
Sbjct: 468 YKFDDERVTKEDVKRALEE 486
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 102/236 (43%), Gaps = 44/236 (18%)
Query: 269 TMQSVCLEEFGGEKAVPP--KL----QETTLIQHIFGGHLQSEVICTKCDKISNQYENMM 322
++ C++ G KA PP KL +E + I F G TK I++ E +
Sbjct: 865 SLNQSCIDLENGYKAAPPITKLPNCKEEESAIDDGFVGEEN-----TKQAPITSVTETPL 919
Query: 323 DLTVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVK--AWKRLTVKCAPNILTI 380
I AS EC + W D D + VK A K++ + AP +LTI
Sbjct: 920 LGGETISSQPASDNEC------ENWED----LAVDSEEVIVKRDARKKVLINKAPPVLTI 969
Query: 381 ALKRFQS---GKFGKLNKRVAFPETLNLSPYMSDAGDGSD--IYKLYAVVVHIDMLNASF 435
LKRF G+ KL+ V F E ++LS YM D +Y+L +V H+ ++
Sbjct: 970 HLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVEHLGAMSR-- 1027
Query: 436 FGHYICYIKDFMGN-------------WYRIDDSKVRSVDLEEVLSQGAYMLLYSR 478
GHY+ YI+ WY DS+VR LEEVL AY+L Y R
Sbjct: 1028 -GHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYER 1082
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 167 KPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLEKGHRRECSCNDWCFLCEFESHVE 226
+ G+ GL+N GN+CF N V+Q L L + L + + S + E E
Sbjct: 196 RDGYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFL----KEDLSVSGPLVSSLKELFAE 251
Query: 227 RTRQSSQAFSPMN-------ILSRLPNIGGTLGYGRQEDAHEFMRFSIDTM---QSVCLE 276
++S + +N + S+ P G +Q D+HE +R +D + +S +
Sbjct: 252 SNSEASVFRNEINPRDLFFSVCSQAPQFRGY----QQHDSHELLRCLLDGLSIEESSLRK 307
Query: 277 EFG-GEKAVPPKLQETTLIQHIFGGHLQSEVICTKCDKISNQYENMMDLTVEI 328
+ G + Q+ TLI +FGG + S V C +C S YE MDL++ +
Sbjct: 308 KLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPV 360
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 325 TVEIHGDAASLEECLDQFTVKEWLDGDNKYKCDGCKGYVKAWKRLTVKCAPNILTIALKR 384
T + + SL CL+ F +E L D + C C +A K+L + P +L I LKR
Sbjct: 760 TKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKR 819
Query: 385 FQSGKF--GKLNKRVAFP-ETLNLSPYMSDAG-DGSDIYKLYAVVVHIDMLNASFFGHYI 440
F + KL V FP L+L+ Y+++ +Y+LYA+ H + + GHY
Sbjct: 820 FSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGS---GHYT 876
Query: 441 CYIKDF-MGNWYRIDDSKVRSVDLEEVLSQGAYMLLYSRCS 480
+IK WY DDS + ++ ++V S AY+L Y R S
Sbjct: 877 AHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRKS 917