Miyakogusa Predicted Gene
- Lj5g3v0469140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0469140.1 Non Chatacterized Hit- tr|A9NZC0|A9NZC0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,42.52,1e-18,DUF1677,Protein of unknown function DUF1677, plant;
seg,NULL,CUFF.53026.1
(154 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72510.2 | Symbols: | Protein of unknown function (DUF1677) ... 82 1e-16
AT1G72510.1 | Symbols: | Protein of unknown function (DUF1677) ... 82 1e-16
AT5G20670.1 | Symbols: | Protein of unknown function (DUF1677) ... 82 1e-16
AT2G09970.1 | Symbols: | Protein of unknown function (DUF1677) ... 68 3e-12
AT3G22540.1 | Symbols: | Protein of unknown function (DUF1677) ... 55 1e-08
AT4G14819.1 | Symbols: | Protein of unknown function (DUF1677) ... 54 3e-08
AT2G25780.1 | Symbols: | Protein of unknown function (DUF1677) ... 47 5e-06
>AT1G72510.2 | Symbols: | Protein of unknown function (DUF1677) |
chr1:27303906-27304403 FORWARD LENGTH=165
Length = 165
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 19/121 (15%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISMDEALDRHIGFCQEFRYS 100
L EECT++YI V+ER+ G+WICGLC +++ +EA+ RH+ C +F+ S
Sbjct: 44 LTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSS 103
Query: 101 APNEE---DLVHAVKQILFRSLDSPRKER--------------FSC--RPLGRSQSCFST 141
+P L+ A++QIL +SLDSPR R C L RS SCF++
Sbjct: 104 SPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFAS 163
Query: 142 M 142
+
Sbjct: 164 L 164
>AT1G72510.1 | Symbols: | Protein of unknown function (DUF1677) |
chr1:27303906-27304403 FORWARD LENGTH=165
Length = 165
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 19/121 (15%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISMDEALDRHIGFCQEFRYS 100
L EECT++YI V+ER+ G+WICGLC +++ +EA+ RH+ C +F+ S
Sbjct: 44 LTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSS 103
Query: 101 APNEE---DLVHAVKQILFRSLDSPRKER--------------FSC--RPLGRSQSCFST 141
+P L+ A++QIL +SLDSPR R C L RS SCF++
Sbjct: 104 SPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFAS 163
Query: 142 M 142
+
Sbjct: 164 L 164
>AT5G20670.1 | Symbols: | Protein of unknown function (DUF1677) |
chr5:6993332-6993793 REVERSE LENGTH=153
Length = 153
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISMDEALDRHIGFCQEFRYS 100
EECT AYI RVKER G W+CGLC IS++EAL RH FC FR
Sbjct: 33 FAEECTPAYINRVKERHKGHWLCGLCAEAVKDEVVRSSTRISVEEALRRHTTFCHRFRSW 92
Query: 101 APN-EEDLVHAVKQILFRSLD-SPRKERF---------------SCRPLGRSQSCFSTMQ 143
+P+ EED + + +IL RSLD SPR+ S R L RS SCF ++
Sbjct: 93 SPDEEEDPISVIGRILRRSLDGSPRRTNTRTSSSGALPGIDGVESRRSLLRSGSCFPSLS 152
Query: 144 V 144
Sbjct: 153 A 153
>AT2G09970.1 | Symbols: | Protein of unknown function (DUF1677) |
chr2:3780172-3780672 REVERSE LENGTH=166
Length = 166
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISM-DEALDRHIGFCQEFRY 99
L +ECTE+Y ++ER+ G+WI G C ++ +EA+ RH+ C +F+
Sbjct: 44 LTDECTESYTEMIRERYIGKWISGFCSEAVKYKVMRTKRFLTTEEEAMARHMNKCNKFKS 103
Query: 100 SAPNEE---DLVHAVKQILFRSLDSPRKER--------------FSC--RPLGRSQSCFS 140
S+P L+ A++QIL +SLDSPR R C L RS SCF+
Sbjct: 104 SSPPSNLTRHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDNHHDCVSNVLSRSDSCFA 163
Query: 141 TM 142
++
Sbjct: 164 SL 165
>AT3G22540.1 | Symbols: | Protein of unknown function (DUF1677) |
chr3:7984233-7984565 REVERSE LENGTH=110
Length = 110
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISMDEALDRHIGFCQEFRYS 100
L+E+CT+ YI+ VK F +W+CGLC M ++DEA+ H+ FC +F+
Sbjct: 13 LMEDCTQDYISEVKSNFDNKWLCGLC-SEAVRDEVSRRKMTTVDEAVKAHVSFCGKFKKD 71
Query: 101 APNEEDLVHAVKQILFR 117
P + ++Q+L R
Sbjct: 72 NPAVH-VADGMRQMLRR 87
>AT4G14819.1 | Symbols: | Protein of unknown function (DUF1677) |
chr4:8507365-8507679 FORWARD LENGTH=104
Length = 104
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 41 LVEECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMISMDEALDRHIGFCQEFRYS 100
L+E+CT+ YI++VK F G+W+CGLC + +EA++ H+ FC +F +
Sbjct: 13 LMEDCTQHYISKVKANFAGKWLCGLCSEAVSDEFSRSSKTV--EEAVNAHMSFCGKF--N 68
Query: 101 APNEEDLVHAVKQILFR 117
A E + ++Q+L R
Sbjct: 69 ANPAELVADGMRQMLRR 85
>AT2G25780.1 | Symbols: | Protein of unknown function (DUF1677) |
chr2:10995169-10995923 FORWARD LENGTH=153
Length = 153
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 43 EECTEAYIARVKERFGGRWICGLCXXXXXXXXXXXXXMIS-MDEALDRHIGFCQEFRYS- 100
EECT YIA+V+ + G W+CGLC + + + EA D H G C F +
Sbjct: 48 EECTMQYIAKVRNLYSGNWVCGLCGEVVTERLRKDPPIAAGIQEAFDWHKGICDAFNSTT 107
Query: 101 -APNEEDLVHAVKQILFRSLDSPRKERFSC-RPLGRSQSC 138
+ D ++++I RS + FS + R+ SC
Sbjct: 108 RVNPKLDFTRSMREIAKRSSQNRMMSDFSIGSKIARTISC 147