Miyakogusa Predicted Gene

Lj5g3v0469120.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469120.2 Non Chatacterized Hit- tr|F0XVC5|F0XVC5_AURAN
Putative uncharacterized protein (Fragment)
OS=Aureoco,31.61,0.000000000000008,G_PROTEIN_RECEP_F2_4,GPCR, family
2-like; GCR1CAMPR,GCR1-cAMP receptor; Dicty_CAR,NULL; G
PROTEIN-CO,CUFF.53107.2
         (198 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48270.1 | Symbols: GCR1 | G-protein-coupled receptor 1 | chr...   310   4e-85

>AT1G48270.1 | Symbols: GCR1 | G-protein-coupled receptor 1 |
           chr1:17828314-17830214 REVERSE LENGTH=326
          Length = 326

 Score =  310 bits (794), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/205 (73%), Positives = 167/205 (81%), Gaps = 7/205 (3%)

Query: 1   MFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAIHFITFYMPLWGAILYNGFT 60
           MFHLYVWGTSLV+TV+RSFGN+H H G WCWTQTG  GKA+HF+TFY PLWGAILYNGFT
Sbjct: 122 MFHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGFT 181

Query: 61  YLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDFF 120
           Y QVIRML NA RMAVGMS +    D R  ++ LNRWGYYPLILIGSWAFGTINRIHDF 
Sbjct: 182 YFQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDFI 241

Query: 121 DPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFKY 180
           +P HKIFWLS+LDVGTAALMGLFNSIAYG NSSVRRAI ERL+   PERLYRWLP+ F+ 
Sbjct: 242 EPGHKIFWLSVLDVGTAALMGLFNSIAYGFNSSVRRAIHERLELFLPERLYRWLPSNFRP 301

Query: 181 KN-------LQQESELVSFQTEGQR 198
           KN        QQ SE+VS +TE Q+
Sbjct: 302 KNHLILHQQQQQRSEMVSLKTEDQQ 326