Miyakogusa Predicted Gene

Lj5g3v0469120.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469120.1 tr|H0K816|H0K816_9PSEU NADH dehydrogenase
OS=Saccharomonospora azurea SZMC 14600 GN=SZMC14600_16246
,34.25,0.7,seg,NULL,CUFF.53107.1
         (319 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48270.1 | Symbols: GCR1 | G-protein-coupled receptor 1 | chr...   495   e-140

>AT1G48270.1 | Symbols: GCR1 | G-protein-coupled receptor 1 |
           chr1:17828314-17830214 REVERSE LENGTH=326
          Length = 326

 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/326 (74%), Positives = 265/326 (81%), Gaps = 7/326 (2%)

Query: 1   MATSAAIGGALTAHDRWILTAVNXXXXXXXXXXXXFIVLCYLLFKELRKFSFKLVFYLAL 60
           M+     GG LTA DR I+TA+N            FIVLCY LFKELRKFSFKLVFYLAL
Sbjct: 1   MSAVLTAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLAL 60

Query: 61  SDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120
           SDMLCSFF ++GDPS+GF CYAQGY+THFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE
Sbjct: 61  SDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120

Query: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAIHFITFYMPLWGAILYNGF 180
           AMFHLYVWGTSLV+TV+RSFGN+H H G WCWTQTG  GKA+HF+TFY PLWGAILYNGF
Sbjct: 121 AMFHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGF 180

Query: 181 TYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF 240
           TY QVIRML NA RMAVGMS +    D R  ++ LNRWGYYPLILIGSWAFGTINRIHDF
Sbjct: 181 TYFQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDF 240

Query: 241 FDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFK 300
            +P HKIFWLS+LDVGTAALMGLFNSIAYG NSSVRRAI ERL+   PERLYRWLP+ F+
Sbjct: 241 IEPGHKIFWLSVLDVGTAALMGLFNSIAYGFNSSVRRAIHERLELFLPERLYRWLPSNFR 300

Query: 301 YKN-------LQQESELVSFQTEGQR 319
            KN        QQ SE+VS +TE Q+
Sbjct: 301 PKNHLILHQQQQQRSEMVSLKTEDQQ 326