Miyakogusa Predicted Gene

Lj5g3v0469110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469110.1 Non Chatacterized Hit- tr|I1M9C6|I1M9C6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,93.48,9e-19,
,TC75015.path1.1
         (56 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72540.1 | Symbols:  | Protein kinase superfamily protein | c...    61   1e-10
AT2G05940.1 | Symbols:  | Protein kinase superfamily protein | c...    54   3e-08
AT2G26290.1 | Symbols: ARSK1 | root-specific kinase 1 | chr2:111...    48   1e-06
AT5G35580.1 | Symbols:  | Protein kinase superfamily protein | c...    47   4e-06

>AT1G72540.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:27314932-27316669 REVERSE LENGTH=450
          Length = 450

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 33/44 (75%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYV 45
           K A LA++CLSH+P  RP+M+ VVK LEP+ D  D+  GPFVY+
Sbjct: 335 KAAALAYQCLSHNPKSRPTMTTVVKTLEPILDLKDIQNGPFVYI 378


>AT2G05940.1 | Symbols:  | Protein kinase superfamily protein |
           chr2:2287514-2289270 REVERSE LENGTH=462
          Length = 462

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVY 44
           K A LA++CLSH P  RP MS VV +L  L+D++D+ +G F Y
Sbjct: 338 KAATLAYQCLSHRPKNRPCMSAVVSILNDLKDYNDIPMGTFTY 380


>AT2G26290.1 | Symbols: ARSK1 | root-specific kinase 1 |
           chr2:11192237-11194259 REVERSE LENGTH=424
          Length = 424

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 4   AMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFD 35
           A LA+KCLS HP  RP+M +VVKVLE +Q+ D
Sbjct: 341 ASLAYKCLSQHPKYRPTMCEVVKVLESIQEVD 372


>AT5G35580.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:13761980-13763851 FORWARD LENGTH=494
          Length = 494

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDF-DDVLIGPFVY 44
           K A LA++CL + P  RP +S VV VL+ ++D+ DD+ IG F Y
Sbjct: 327 KAATLAYQCLRYRPKTRPDISTVVSVLQDIKDYKDDIPIGIFTY 370