Miyakogusa Predicted Gene
- Lj5g3v0468090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0468090.1 tr|G7KT26|G7KT26_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,76.83,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.53022.1
(647 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 495 e-140
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 358 7e-99
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 8e-99
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 353 3e-97
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 8e-93
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 9e-93
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 335 5e-92
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 335 8e-92
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 334 1e-91
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 332 3e-91
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 8e-91
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 325 4e-89
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 3e-88
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 5e-88
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 321 9e-88
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 318 5e-87
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 7e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 317 1e-86
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 317 1e-86
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 316 3e-86
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 9e-86
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 7e-85
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 311 8e-85
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 310 2e-84
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 309 4e-84
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 5e-84
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 300 2e-81
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 300 2e-81
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 2e-80
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 296 2e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 285 7e-77
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 281 9e-76
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 1e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 5e-74
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 274 1e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 272 7e-73
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 270 2e-72
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 5e-72
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 9e-70
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 5e-68
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 8e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 7e-65
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 245 9e-65
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 243 3e-64
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 243 3e-64
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 9e-64
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 238 1e-62
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 236 3e-62
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 228 1e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 3e-59
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 8e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 221 1e-57
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 211 1e-54
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 206 3e-53
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 173 3e-43
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 104 2e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 99 1e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 83 6e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 4e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 8e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 72 2e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 3e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 2e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 4e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 4e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 4e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 5e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 57 5e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 2e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 54 5e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/547 (46%), Positives = 342/547 (62%), Gaps = 8/547 (1%)
Query: 65 KVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVV 124
K+SA L + KQ H ++K G + L LQN++L Y K +E +DADKLFDE+P RN+V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
+WNI+I GV RD + + A L Y R+L V D+V+F GLI C N+ GIQ
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
LHC VK G + CF +LV Y KCGL+ ARR F AV RDLV+ N ++S Y LN +
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 245 PEEAFSMFNLLRMDGAN--GDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
+EAF + L+ D GD FTFSSLLS C + GK H+++ + ++ D+ VA
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVA 279
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+AL+NMYAK+ +++DAR F+ M++RNVV+WN +IVG G+G E ++L ML E
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
PDELT +S +S C SAI E Q A+ K +FLSVANSLIS+YS+ GN++ AL C
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
F EPDLV+WTS+I A A HG AE++ +MFE ML + PD+++FL VLSAC+H GLV
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLV 458
Query: 483 TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIG 542
+GL F MT Y+I + +HYTCL+DLLGR G IDEA ++L SMP E + L AF G
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Query: 543 SCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDK-GDAK 601
C +H +W A+KL IEP K VNY+ +SN Y S+ W RK + K
Sbjct: 519 GCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPK 578
Query: 602 VPGCSWI 608
PGCSW+
Sbjct: 579 TPGCSWL 585
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 12/342 (3%)
Query: 47 QTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCK 106
+ LF D H+ +++ + G QLH ++K G ++ Y KC
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 107 EIEDADKLFDELPGRNVVSWNIMIRG--VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYV 164
I +A ++F+ + R++V WN ++ + G +E L S R DY
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFR-----GDYF 246
Query: 165 TFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV 224
TF+ L+ +C I G Q+H KV + D V AL+++YAK + +AR F ++
Sbjct: 247 TFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM 302
Query: 225 PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
R++V N MI +A N EA +F + ++ DE TF+S+LS C K
Sbjct: 303 VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIK 362
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
+++ ++ + VA++LI+ Y++N N+++A F + ++V+W ++I ++G
Sbjct: 363 QVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
E L++ ML++ PD++T +S C + + E L+
Sbjct: 423 FAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLR 463
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 162/369 (43%), Gaps = 21/369 (5%)
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT 335
+L++ K H +++Q + + + + L+ Y K DA +FDEM +RN+V WN
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 336 IIVGC-GNYGDGSEVLKL----LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
+I G GD + L L +L S D ++ I LC ++ + +Q H +
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
VK + + SL+ Y KCG I A + F + DLV W +L+ +Y +G ++A
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 451 TEMFEKMLS--CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV-YQIVPDSDHYTC 507
+ + M S D +F +LSAC + +G ++ V YQ D T
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQF--DIPVATA 281
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKL-HANIGLAEWAAEKLFIIEPE 566
L+++ + + +A E SM V +G + + + L ++P+
Sbjct: 282 LLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPD 341
Query: 567 KSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
+ + +S+ W +++ + M+ KG A ++ VAN + S SR+ +
Sbjct: 342 ELTFASVLSSCAKFSAIW-EIKQVQAMVTKKGSA-----DFLSVANSLISSYSRNGNLSE 395
Query: 627 ALEMYATLK 635
AL + +++
Sbjct: 396 ALLCFHSIR 404
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 331/627 (52%), Gaps = 68/627 (10%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA-- 134
+ +HA +IK GF + + +QN+++ Y KC +ED ++FD++P RN+ +WN ++ G+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 135 GRDNENDS---SAP-----------------------LCVSYFKRMLLEKVVPDYVTFNG 168
G +E DS S P LC YF M E V + +F
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC--YFAMMHKEGFVLNEYSFAS 157
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
++ +C +++ G+Q+H K F D ++G ALVD+Y+KCG V +A+R F + R+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+V N +I+C+ N EA +F ++ DE T +S++S C +L +G+ H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 289 LILRQ-AFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA--------------- 332
+++ +D+++++A ++MYAK I +AR +FD M IRNV+A
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 333 ----------------WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
WN +I G G+ E L L + RE P + ++ + C
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 377 YASAITETLQTHAIAVKLSF------QEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+ + +Q H +K F ++ + V NSLI Y KCG + FR E D
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
V+W ++I +A +G +A E+F +ML G PD ++ +GVLSAC H G V +G HYF+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
MT + + P DHYTC+VDLLGR G ++EA ++ MP++ +S G+ + +CK+H NI
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 551 GLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEV 610
L ++ AEKL +EP S Y +SN+YA W DV + RK + +G K PGCSWI++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 611 ANQVHSFVSRDKTHPKALEMYATLKML 637
H F+ +DK+HP+ ++++ L +L
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 197/426 (46%), Gaps = 45/426 (10%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
+ +G Q+H+ + K F + + + ++ +Y KC + DA ++FDE+ RNVVSWN +I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
E + A + F+ ML +V PD VT +I +C I VG ++H VK
Sbjct: 228 F-----EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 193 G-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL---------- 241
D + A VD+YAKC ++ AR F ++P R+++ MIS YA+
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 242 ---------------------NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
N EEA S+F LL+ + ++F+++L C L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 281 DIGKLAHSLILRQAF------DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+G AH +L+ F + D+ V ++LI+MY K + + VF +M+ R+ V+WN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK- 393
+I+G G G+E L+L R+ML G PD +T+ +S CG+A + E + +
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 522
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATE 452
++ + G + A + +PD V W SL+ A H
Sbjct: 523 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY 582
Query: 453 MFEKML 458
+ EK+L
Sbjct: 583 VAEKLL 588
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 32/300 (10%)
Query: 263 DEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV 321
D F+ LL C + I + H+ +++ F +++ + + LI+ Y+K ++ D R V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 322 FDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML------------------------ 357
FD+M RN+ WN+++ G G E L R M
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 358 -------REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+EGF +E + +S +S C + + + +Q H++ K F + + ++L+ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
SKCGN+ A + F + ++V+W SLI + +G A +A ++F+ ML V PD V+
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
V+SACA + G + ++ D VD+ + I EA + SMP+
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 110/281 (39%), Gaps = 64/281 (22%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHV------LSLQNQILSVYLKCKEIE 109
H AN LK A A L G Q H H++K GF + + N ++ +Y+KC +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 110 DADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
+ +F ++ R+ VSWN MI G A N++ + F+ ML PD++T G+
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA-----LELFREMLESGEKPDHITMIGV 499
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR-------RAFC 222
+ +C G VE R R F
Sbjct: 500 LSAC-----------------------------------GHAGFVEEGRHYFSSMTRDFG 524
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
P RD C M+ EEA SM + M D + SLL+ C +
Sbjct: 525 VAPLRDHYTC--MVDLLGRAGFLEEAKSMIEEMPM---QPDSVIWGSLLAACKVHRNITL 579
Query: 283 GK-LAHSLILRQAFDSDVLVASALINMYA---KNENITDAR 319
GK +A L+ + +S V L NMYA K E++ + R
Sbjct: 580 GKYVAEKLLEVEPSNSGPYV--LLSNMYAELGKWEDVMNVR 618
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 315/571 (55%), Gaps = 9/571 (1%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
FL GKQ+HAH++++G SL N ++ Y+KC + A KLF+ +P +N++SW ++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
G + ++ + F M + PD + ++ SC H +G G Q+H YT+K
Sbjct: 324 GY-----KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 378
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA-LNCLPE--EA 248
D +V +L+D+YAKC + +AR+ F D+V+ N MI Y+ L E EA
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM 308
++F +R TF SLL +L + K H L+ + + D+ SALI++
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
Y+ + D+R VFDEM ++++V WN++ G + E L L ++ PDE T
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 369 SSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE 428
++ ++ G +++ + H +K + + N+L+ Y+KCG+ A K F
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
D+V W S+I +YA HG+ +KA +M EKM+S G+ P+ ++F+GVLSAC+H GLV GL
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 489 FNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHA 548
F LM + I P+++HY C+V LLGR G +++A EL+ MP + + + + C
Sbjct: 679 FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Query: 549 NIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWI 608
N+ LAE AAE + +P+ S ++ +SNIYAS+ W + + R+ + +G K PG SWI
Sbjct: 738 NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Query: 609 EVANQVHSFVSRDKTHPKALEMYATLKMLHV 639
+ +VH F+S+DK+H KA ++Y L L V
Sbjct: 798 GINKEVHIFLSKDKSHCKANQIYEVLDDLLV 828
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 222/472 (47%), Gaps = 38/472 (8%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
C++ L A L G Q+HA+ IK + + N ++ +Y KC + DA K+FD
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
+VV +N MI G + + + L + F+ M + P +TF L+ + ++
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNI--FRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
G+ Q+H K G +LD F G AL+D+Y+ C ++++R F + +DLV+ N M + Y
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGY 530
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
EEA ++F L++ DEFTF+++++ L +G+ H +L++ + +
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
+ +AL++MYAK + DA FD R+VV WN++I N+G+G + L++L M+ E
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 650
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
G P+ +T +S C +A + + L+ + ++
Sbjct: 651 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI----------------------- 687
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
EP+ + ++ G+ KA E+ EKM + P + + +LS CA
Sbjct: 688 --------EPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKA 736
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
G V H + ++ DS +T L ++ G+ EA ++ M VE
Sbjct: 737 GNVELAEHAAEM--AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVE 786
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 235/529 (44%), Gaps = 47/529 (8%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA--G 135
QL + L+K GF + + ++ YLK I+ A +FD LP ++ V+W MI G G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
R + + + F +++ + VVPD + ++ +C + G Q+H + ++ G +
Sbjct: 229 R-------SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+D + L+D Y KCG V A + F +P ++++ ++S Y N L +EA +F +
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
G D + SS+L+ C +L G H+ ++ +D V ++LI+MYAK + +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYG---DGSEVLKLLRDMLREGFSPDELTISSTI 372
TDAR VFD +VV +N +I G G + E L + RDM P LT S +
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
+++ + Q H + K + ++LI YS C + + F + DLV
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA-----------HCGL 481
W S+ Y + E+A +F ++ PD +F +++A HC L
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 482 VTKGL----HYFNLMTSVYQI--VPDSDH-------------YTCLVDLLGRYGLIDEAF 522
+ +GL + N + +Y P+ H + ++ +G +A
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 523 ELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKL-----FIIEPE 566
++L M E F+G ++ GL E ++ F IEPE
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 194/422 (45%), Gaps = 9/422 (2%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A L++ A L +H +I +G L N ++++Y + + A K+F+++P
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
RN+VSW+ M+ N + V + + K P+ + I +C G
Sbjct: 108 RNLVSWSTMVSAC----NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163
Query: 181 --VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISC 238
+ QL + VK GFD D +VG L+D Y K G ++ AR F A+P + V MIS
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
+ +F L D D + S++LS C L + + GK H+ ILR + D
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
+ + LI+ Y K + A +F+ M +N+++W T++ G E ++L M +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
G PD SS ++ C A+ Q HA +K + V NSLI Y+KC +T
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 419 ALKCFRLTEEPDLVTWTSLIHAYAFHG---QAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
A K F + D+V + ++I Y+ G + +A +F M + P ++F+ +L A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 476 CA 477
A
Sbjct: 464 SA 465
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD 323
EF L D L +Y + H I+ + D +++ LIN+Y++ + AR VF+
Sbjct: 46 EFARLLQLRASDDLLHYQ--NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 324 EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPDELTISSTISLCGYASAIT 382
+M RN+V+W+T++ C ++G E L + + R SP+E +SS I C
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163
Query: 383 E--TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
Q + VK F + V LI Y K GNI A F E VTWT++I
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQI 498
G++ + ++F +++ VVPD VLSAC+ + G +H L Y +
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR---YGL 280
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
D+ L+D + G + A +L MP
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 311/564 (55%), Gaps = 6/564 (1%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+QLH ++K GF S+ N +++ YLK + ++ A K+FDE+ R+V+SWN +I G
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV- 272
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
++ A +S F +ML+ + D T + C I +G +H VK F
Sbjct: 273 ----SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ L+D+Y+KCG +++A+ F + R +V MI+ YA L EA +F +
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+G + D +T +++L+ C D GK H I D+ V++AL++MYAK ++
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISL 374
+A VF EM ++++++WNTII G +E L L +L E FSPDE T++ +
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
C SA + + H ++ + VANSL+ Y+KCG + A F DLV+W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS 494
T +I Y HG ++A +F +M G+ D +SF+ +L AC+H GLV +G +FN+M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
+I P +HY C+VD+L R G + +A+ + +MP+ ++ GA + C++H ++ LAE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 555 WAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
AEK+F +EPE + Y M+NIYA W V+ RK IG +G K PGCSWIE+ +V
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 615 HSFVSRDKTHPKALEMYATLKMLH 638
+ FV+ D ++P+ + A L+ +
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVR 772
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 231/470 (49%), Gaps = 15/470 (3%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
DP T+ + L++ A L +GK++ + GF +L +++ +Y C ++++A
Sbjct: 93 DPRTL----CSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
++FDE+ + WNI++ +A + + S + FK+M+ V D TF+ +
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGS-----IGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVM 231
S ++ G QLH + +K GF VG +LV Y K V++AR+ F + RD++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
N +I+ Y N L E+ S+F + + G D T S+ + C +G+ HS+ +
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK 351
+ F + + L++MY+K ++ A+ VF EM R+VV++ ++I G G E +K
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
L +M EG SPD T+++ ++ C + E + H + + V+N+L+ Y+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML-SCGVVPDRVSFL 470
KCG++ A F D+++W ++I Y+ + A +A +F +L PD +
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 471 GVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLI 518
VL ACA KG +H + +M + Y D LVD+ + G +
Sbjct: 504 CVLPACASLSAFDKGREIHGY-IMRNGY--FSDRHVANSLVDMYAKCGAL 550
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 206/458 (44%), Gaps = 23/458 (5%)
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
R+V N +R N ++ LCVS K D T ++ C ++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVS-------GKWDIDPRTLCSVLQLCADSKSLK 111
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G ++ + GF +D +G L +Y CG ++ A R F V + N++++ A
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
+ + +F + G D +TFS + +L G+ H IL+ F
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
V ++L+ Y KN+ + AR VFDEM R+V++WN+II G + G + L + ML G
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 361 FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSAL 420
D TI S + C + I+ H+I VK F N+L+ YSKCG++ SA
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 421 KCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
FR + +V++TS+I YA G A +A ++FE+M G+ PD + VL+ CA
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 481 LVTKGLHYFNLMTSVYQIVPDSDH------YTCLVDLLGRYGLIDEA---FELLRSMPVE 531
L+ +G V++ + ++D L+D+ + G + EA F +R +
Sbjct: 412 LLDEG-------KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 464
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
+ +G + +C + + L E+ E++V
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 68 AKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWN 127
A+ L EGK++H + + + + N ++ +Y KC +++A+ +F E+ ++++SWN
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 128 IMIRGVAGRDNENDSSAPLCVSYFKRMLLEK-VVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
+I G + N++ +S F +L EK PD T ++ +C G ++H
Sbjct: 468 TIIGGYSKNCYANEA-----LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
Y ++ G+ D V +LVD+YAKCG + A F + +DLV VMI+ Y ++ +
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ-AFDSDVLVASAL 305
EA ++FN +R G DE +F SLL C D G +++ + + V + +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 306 INMYAKNENITDARGVFDEMLI-RNVVAWNTIIVGC 340
++M A+ ++ A + M I + W ++ GC
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD + C L A + +G+++H ++++ G+ + N ++ +Y KC + A
Sbjct: 497 PDERTVACV--LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
LFD++ +++VSW +MI G ++ ++ F +M + D ++F L+ +
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEA-----IALFNQMRQAGIEADEISFVSLLYA 609
Query: 173 C 173
C
Sbjct: 610 C 610
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 319/586 (54%), Gaps = 8/586 (1%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
P+ V C L V A + + G QLH ++ G S++N +LS+Y KC +DA
Sbjct: 237 PNAVTFDCV--LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
KLF + + V+WN MI G +S +++F M+ V+PD +TF+ L+ S
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEES-----LTFFYEMISSGVLPDAITFSSLLPS 349
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
+F N+ Q+HCY ++ LD F+ AL+D Y KC V A+ F D+V+
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
MIS Y N L ++ MF L + +E T S+L V L +G+ H I++
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
+ FD+ + A+I+MYAK + A +F+ + R++V+WN++I C + S + +
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
R M G D ++IS+ +S C + + H +K S + ++LI Y+K
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML-SCGVVPDRVSFLG 471
CGN+ +A+ F+ +E ++V+W S+I A HG+ + + +F +M+ G+ PD+++FL
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
++S+C H G V +G+ +F MT Y I P +HY C+VDL GR G + EA+E ++SMP
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESAR 591
++ G +G+C+LH N+ LAE A+ KL ++P S Y +SN +A+ R+W V R
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 592 KMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
++ ++ K+PG SWIE+ + H FVS D HP++ +Y+ L L
Sbjct: 770 SLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 225/459 (49%), Gaps = 11/459 (2%)
Query: 94 LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
+ + ++ YL+ +I+ KLFD + ++ V WN+M+ G A + DS + F
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA-KCGALDS----VIKGFSV 229
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
M ++++ P+ VTF+ ++ C I +G+QLH V G D + + +L+ +Y+KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV 273
++A + F + D V N MIS Y + L EE+ + F + G D TFSSLL
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAW 333
E + K H I+R + D+ + SALI+ Y K ++ A+ +F + +VV +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
+I G + G + L++ R +++ SP+E+T+ S + + G A+ + H +K
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
F ++ ++I Y+KCG + A + F + D+V+W S+I A A ++
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVT--KGLHYFNLMTSVYQIVPDSDHYTCLVDL 511
F +M G+ D VS LSACA+ + K +H F + S + D + L+D+
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS---LASDVYSESTLIDM 586
Query: 512 LGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
+ G + A + ++M E + + I +C H +
Sbjct: 587 YAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKL 624
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 200/439 (45%), Gaps = 16/439 (3%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
LR S ++T+ R + C+N L +GKQ+HA LI +
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNP-------NLLRQGKQVHAFLIVNSISGDSYTDER 75
Query: 98 ILSVYLKCKEIEDADKLFDELPGR--NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
IL +Y C D K+F L R ++ WN +I N + ++++ +ML
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQA-----LAFYFKML 130
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK-VGFDLDCFVGCALVDLYAKCGLV 214
V PD TF L+ +CV N GI TV +G D + FV +L+ Y + G +
Sbjct: 131 CFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
+ + F V +D V+ NVM++ YA + F+++RMD + + TF +LSVC
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC 249
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+ D+G H L++ D + + ++L++MY+K DA +F M + V WN
Sbjct: 250 ASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+I G G E L +M+ G PD +T SS + + Q H ++
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
S + + ++LI AY KC ++ A F D+V +T++I Y +G + EMF
Sbjct: 370 SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Query: 455 EKMLSCGVVPDRVSFLGVL 473
++ + P+ ++ + +L
Sbjct: 430 RWLVKVKISPNEITLVSIL 448
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 7/266 (2%)
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
S LL C GK H+ ++ + D ++ MYA + +D +F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 327 IR--NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT-- 382
+R ++ WN+II G ++ L ML G SPD T + C
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
+ L ++ + EF VA+SLI AY + G I K F + D V W +++ YA
Sbjct: 158 DFLSDTVSSLGMDCNEF--VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 443 FHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDS 502
G + + F M + P+ V+F VLS CA L+ G+ L+ V + +
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV-VSGVDFEG 274
Query: 503 DHYTCLVDLLGRYGLIDEAFELLRSM 528
L+ + + G D+A +L R M
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMM 300
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 302/574 (52%), Gaps = 5/574 (0%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LKV A L GK++H L+K GF L + ++Y KC+++ +A K+FD +P R++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSWN ++ G + + A + + K M E + P ++T ++ + I VG
Sbjct: 202 VSWNTIVAGYS-----QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
++H Y ++ GFD + ALVD+YAKCG +E AR+ F + R++V N MI Y N
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
P+EA +F + +G + + L C L + G+ H L + D +V V +
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+LI+MY K + + A +F ++ R +V+WN +I+G G + L M P
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D T S I+ S H + ++ + + V +L+ Y+KCG I A F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT 483
+ E + TW ++I Y HG + A E+FE+M + P+ V+FL V+SAC+H GLV
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 484 KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGS 543
GL F +M Y I DHY +VDLLGR G ++EA++ + MPV+ + GA +G+
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 544 CKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVP 603
C++H N+ AE AAE+LF + P+ + ++NIY + W V R + +G K P
Sbjct: 617 CQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Query: 604 GCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
GCS +E+ N+VHSF S HP + ++YA L+ L
Sbjct: 677 GCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/530 (27%), Positives = 251/530 (47%), Gaps = 25/530 (4%)
Query: 25 FSNSSHQPHPWSRLRASVS----VPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLH 80
FS P+P SR R +S +P ++ P + L ++LK E +Q+
Sbjct: 8 FSTVPQIPNPPSRHRHFLSERNYIP-ANVYEHPAALLLERCSSLK---------ELRQIL 57
Query: 81 AHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNEN 140
+ K G Q +++S++ + +++A ++F+ + + V ++ M++G A + +
Sbjct: 58 PLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD 117
Query: 141 DSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV 200
+ + +F RM + V P F L+ C + VG ++H VK GF LD F
Sbjct: 118 KA-----LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 201 GCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA 260
L ++YAKC V AR+ F +P RDLV N +++ Y+ N + A M + +
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 232
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
T S+L L +GK H +R FDS V +++AL++MYAK ++ AR
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
+FD ML RNVV+WN++I + E + + + ML EG P ++++ + C
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
+ H ++V+L +SV NSLIS Y KC + +A F + LV+W ++I
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV--TKGLHYFNLMTSVYQI 498
+A +G+ A F +M S V PD +++ V++A A + K +H + + + +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHA 548
V + T LVD+ + G I A L+ M E T A I H
Sbjct: 473 VFVT---TALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 304/565 (53%), Gaps = 5/565 (0%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L G+QLHA+ K GF ++ +L++Y KC +IE A F E NVV WN+M+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
D+ +S F++M +E++VP+ T+ ++ +C++ ++ +G Q+H +K
Sbjct: 465 YGLLDDLRNS-----FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
F L+ +V L+D+YAK G ++ A +D+V MI+ Y ++A + F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
+ G DE ++ +S C L+ G+ H+ F SD+ +AL+ +Y++
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
I ++ F++ + +AWN ++ G G+ E L++ M REG + T S +
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
+ + + Q HA+ K + V N+LIS Y+KCG+I+ A K F + V
Sbjct: 700 KAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
+W ++I+AY+ HG +A + F++M+ V P+ V+ +GVLSAC+H GLV KG+ YF M
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
S Y + P +HY C+VD+L R GL+ A E ++ MP++ ++ + +C +H N+ +
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 879
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
E+AA L +EPE S Y +SN+YA + W + R+ + +KG K PG SWIEV N
Sbjct: 880 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Query: 613 QVHSFVSRDKTHPKALEMYATLKML 637
+HSF D+ HP A E++ + L
Sbjct: 940 SIHSFYVGDQNHPLADEIHEYFQDL 964
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 241/490 (49%), Gaps = 22/490 (4%)
Query: 43 SVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVY 102
SV ++ + + T+ LK + L EG++LH+ ++K G L ++ Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGS---LDEGRKLHSQILKLGLDSNGCLSEKLFDFY 130
Query: 103 LKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPD 162
L ++ A K+FDE+P R + +WN MI+ +A R+ + F RM+ E V P+
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE-----VFGLFVRMVSENVTPN 185
Query: 163 YVTFNGLIGSC----VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR 218
TF+G++ +C V F V Q+H + G V L+DLY++ G V+ AR
Sbjct: 186 EGTFSGVLEACRGGSVAFD---VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
R F + +D MIS + N EA +F + + G + FSS+LS C +E
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIV 338
+IG+ H L+L+ F SD V +AL+++Y N+ A +F M R+ V +NT+I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQE 398
G G G + ++L + M +G PD T++S + C + Q HA KL F
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 399 FLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ +L++ Y+KC +I +AL F TE ++V W ++ AY + +F +M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLH-YFNLMTSVYQIVPDSDHYTC--LVDLLGRY 515
+VP++ ++ +L C G + G + ++ + +Q+ + Y C L+D+ +
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----NAYVCSVLIDMYAKL 538
Query: 516 GLIDEAFELL 525
G +D A+++L
Sbjct: 539 GKLDTAWDIL 548
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 218/448 (48%), Gaps = 10/448 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+QLH ++K GF + N ++S+Y + A+ +F + R+ V++N +I G++
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS- 365
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+ FKRM L+ + PD T L+ +C + G QLH YT K+GF
Sbjct: 366 ----QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ + AL++LYAKC +E A F ++V+ NVM+ Y L +F +F +
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+++ +++T+ S+L C L ++G+ HS I++ F + V S LI+MYAK +
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
A + ++VV+W T+I G Y + L R ML G DE+ +++ +S C
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
A+ E Q HA A F L N+L++ YS+CG I + F TE D + W
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
+L+ + G E+A +F +M G+ + +F + A + + +G ++T
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-- 719
Query: 496 YQIVPDSDHYTC--LVDLLGRYGLIDEA 521
+ DS+ C L+ + + G I +A
Sbjct: 720 -KTGYDSETEVCNALISMYAKCGSISDA 746
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 11/267 (4%)
Query: 54 DTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADK 113
D + +A+K +++ A + +GKQ+HA + K G+ + N ++S+Y KC I DA+K
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 114 LFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSC 173
F E+ +N VSWN +I + +++ + F +M+ V P++VT G++ +C
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEA-----LDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 174 VQFHNIGVGIQ-LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD--LV 230
+ GI + G +VD+ + GL+ A+ +P + LV
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFT-FSSLLSVCDTLEYYDI--GKLAH 287
++ +C + F+ +LL ++ + + S+L +V + D+ K+
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 288 SLILRQAFDSDVLVASALINMYAKNEN 314
+ ++ S + V +++ + Y ++N
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQN 950
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 351 KLLRDMLREGFSPDELTISSTISLC-GYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
K + + G P+ T+ + C ++ E + H+ +KL ++ L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y G++ A K F E + TW +I A + +F +M+S V P+ +F
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 470 LGVLSACAHCGL---VTKGLHYFNLMTSVYQIVPDSDHYTC--LVDLLGRYGLIDEAFEL 524
GVL AC + V + +H +YQ + DS C L+DL R G +D A +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIH----ARILYQGLRDST-VVCNPLIDLYSRNGFVDLARRV 244
Query: 525 LRSMPVEVESDTLGAFIGSCK 545
+ ++ S + G K
Sbjct: 245 FDGLRLKDHSSWVAMISGLSK 265
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 315/564 (55%), Gaps = 11/564 (1%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L G Q H+ +IK L + N ++ +Y KC +EDA ++F+ + R+ V+WN +I
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+NE+++ FKRM L +V D + +C H + G Q+HC +VK
Sbjct: 504 YVQDENESEA-----FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC 558
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
G D D G +L+D+Y+KCG++++AR+ F ++P +V N +I+ Y+ N L EEA +F
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLF 617
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD-VLVASALINMYAK 311
+ G N E TF++++ C E +G H I ++ F S+ + +L+ MY
Sbjct: 618 QEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMN 677
Query: 312 NENITDARGVFDEMLI-RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
+ +T+A +F E+ +++V W ++ G G E LK ++M +G PD+ T +
Sbjct: 678 SRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVT 737
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEP 429
+ +C S++ E H++ L+ +N+LI Y+KCG++ + + F +
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
++V+W SLI+ YA +G AE A ++F+ M ++PD ++FLGVL+AC+H G V+ G F
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+M Y I DH C+VDLLGR+G + EA + + + ++ ++ + +G+C++H +
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
E +AEKL +EP+ S Y +SNIYASQ W + RK++ D+G KVPG SWI+
Sbjct: 918 DIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Query: 610 VANQVHSFVSRDKTHPK--ALEMY 631
V + H F + DK+H + +EM+
Sbjct: 978 VEQRTHIFAAGDKSHSEIGKIEMF 1001
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 204/396 (51%), Gaps = 6/396 (1%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE 157
+++ Y++ +++DA LF E+ +VV+WN+MI G R E + + YF M
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET-----VAIEYFFNMRKS 321
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
V T ++ + N+ +G+ +H +K+G + +VG +LV +Y+KC +E A
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
+ F A+ ++ V N MI YA N + +F ++ G N D+FTF+SLLS C
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
++G HS+I+++ ++ V +AL++MYAK + DAR +F+ M R+ V WNTII
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
+ SE L + M G D ++ST+ C + + + Q H ++VK
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
L +SLI YSKCG I A K F E +V+ +LI Y+ E+A +F++M
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEM 620
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMT 493
L+ GV P ++F ++ AC +T G + +T
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 230/464 (49%), Gaps = 17/464 (3%)
Query: 71 AFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
A L G +HA IK G + + + ++S+Y KC+++E A K+F+ L +N V WN MI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
RG A ++ + + F M D TF L+ +C H++ +G Q H +
Sbjct: 401 RGYA-----HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K + FVG ALVD+YAKCG +E+AR+ F + RD V N +I Y + EAF
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F + + G D +S L C + GK H L ++ D D+ S+LI+MY+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K I DAR VF + +VV+ N +I G + E + L ++ML G +P E+T ++
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQ---EFLSVANSLISAYSKCGNITSALKCF-RLT 426
+ C ++T Q H K F E+L + SL+ Y +T A F L+
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMNSRGMTEACALFSELS 692
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
+V WT ++ ++ +G E+A + +++M GV+PD+ +F+ VL C+ + +G
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 487 HYFNLMTSVYQIVPDSDHYT--CLVDLLGRYGLIDEAFELLRSM 528
+L ++ + D D T L+D+ + G + + ++ M
Sbjct: 753 AIHSL---IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 53/473 (11%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR---- 131
GK +H+ + G L N I+ +Y KC ++ A+K FD L ++V +WN M+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 132 -GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G G+ + F + ++ P+ TF+ ++ +C + N+ G Q+HC +
Sbjct: 138 IGKPGK----------VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K+G + + + G ALVD+YAKC + +ARR F + + V + S Y LPEEA
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F +R +G D F + +IN Y
Sbjct: 248 VFERMRDEGHRPDHLAFVT-----------------------------------VINTYI 272
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
+ + DAR +F EM +VVAWN +I G G G + ++ +M + T+ S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+S G + + L HA A+KL + V +SL+S YSKC + +A K F EE +
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
V W ++I YA +G++ K E+F M S G D +F +LS CA + G + +
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGS 543
++ ++ + LVD+ + G +++A ++ M + ++ T IGS
Sbjct: 453 IIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 57/502 (11%)
Query: 34 PWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLS 93
P LR+ VS+ + +F + T + L A+ + G+Q+H +IK G
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSI----VLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 94 LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVSYF 151
++ +Y KC I DA ++F+ + N V W + G AG E V F
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE-------AVLVF 249
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
+RM E PD++ F +++ Y +
Sbjct: 250 ERMRDEGHRPDHLAF-----------------------------------VTVINTYIRL 274
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G +++AR F + D+V NVMIS + A F +R T S+L
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV 331
S + D+G + H+ ++ S++ V S+L++MY+K E + A VF+ + +N V
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
WN +I G + G+ +V++L DM G++ D+ T +S +S C + + Q H+I
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
+K + L V N+L+ Y+KCG + A + F + D VTW ++I +Y +A
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYT--C 507
++F++M CG+V D L AC H + +G +H ++ + D D +T
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-----DRDLHTGSS 569
Query: 508 LVDLLGRYGLIDEAFELLRSMP 529
L+D+ + G+I +A ++ S+P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLP 591
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 193/403 (47%), Gaps = 11/403 (2%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A+ LK L +GKQ+H +K G L + ++ +Y KC I+DA K+F LP
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+VVS N +I G + + E V F+ ML V P +TF ++ +C + ++
Sbjct: 593 WSVVSMNALIAGYSQNNLEE------AVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 181 VGIQLHCYTVKVGFDLDC-FVGCALVDLYAKCGLVENARRAFCAVPC-RDLVMCNVMISC 238
+G Q H K GF + ++G +L+ +Y + A F + + +V+ M+S
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
++ N EEA + +R DG D+ TF ++L VC L G+ HSLI A D D
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
L ++ LI+MYAK ++ + VFDEM R NVV+WN++I G G + LK+ M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAV-KLSFQEFLSVANSLISAYSKCGNI 416
+ PDE+T ++ C +A +++ + + + + + + ++ + G +
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 417 TSALKCFRLTE-EPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
A +PD W+SL+ A HG + EK++
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 17/300 (5%)
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
IGK HS L DS+ + +A++++YAK ++ A FD L ++V AWN+++
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 342 NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLS 401
+ G +VL+ + P++ T S +S C + + Q H +K+ +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 402 VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
+L+ Y+KC I+ A + F +P+ V WT L Y G E+A +FE+M G
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 462 VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
PD ++F+ V++ G + F M+S PD + ++ G+ G A
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVA 311
Query: 522 FEL---LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIY 578
E +R V+ TLG+ + + + AN+ L ++ +++ SNIY
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG--------LVVHAEAIKLGLASNIY 363
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 125/295 (42%), Gaps = 36/295 (12%)
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
+G +H ++ +G D + +G A+VDLYAKC V A + F + +D+ N M+S Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
P + F L + ++FTFS +LS C + G+ H +++ + +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
AL++MYAK + I+DAR VF+ ++ N V W + G G E + + M EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 361 FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSAL 420
PD L F++V N+ Y + G + A
Sbjct: 257 HRPDHLA-------------------------------FVTVINT----YIRLGKLKDAR 281
Query: 421 KCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
F PD+V W +I + G A E F M V R + VLSA
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 142/313 (45%), Gaps = 10/313 (3%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLS-LQN 96
L +V + + L R + + A ++ K L G Q H + K GF L
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 97 QILSVYLKCKEIEDADKLFDELPG-RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
+L +Y+ + + +A LF EL +++V W M+ G + + + ++K M
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG-----HSQNGFYEEALKFYKEMR 724
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
+ V+PD TF ++ C ++ G +H + DLD L+D+YAKCG ++
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 216 NARRAFCAVPCR-DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
+ + F + R ++V N +I+ YA N E+A +F+ +R DE TF +L+ C
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 275 DTLEYYDIGKLAHSLILRQ-AFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVA 332
G+ +++ Q ++ V + ++++ + + +A + ++ +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 333 WNTIIVGCGNYGD 345
W++++ C +GD
Sbjct: 905 WSSLLGACRIHGD 917
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 316/585 (54%), Gaps = 15/585 (2%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A AL V A+ G Q+H ++K G + + N ++++YLKC + A LFD+
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 121 RNVVSWNIMIRGVA--GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN 178
++VV+WN MI G A G D E + F M L V +F +I C
Sbjct: 258 KSVVTWNSMISGYAANGLDLE-------ALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 179 IGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC-RDLVMCNVMIS 237
+ QLHC VK GF D + AL+ Y+KC + +A R F + C ++V MIS
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+ N EEA +F+ ++ G +EFT+S +L+ + ++ H+ +++ ++
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYER 426
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
V +AL++ Y K + +A VF + +++VAW+ ++ G G+ +K+ ++
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 358 REGFSPDELTISSTISLCGYASA-ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
+ G P+E T SS +++C +A + + Q H A+K L V+++L++ Y+K GNI
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 417 TSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
SA + F+ E DLV+W S+I YA HGQA KA ++F++M V D V+F+GV +AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 477 AHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDT 536
H GLV +G YF++M +I P +H +C+VDL R G +++A +++ +MP S
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 537 LGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGD 596
+ +C++H L AAEK+ ++PE S Y +SN+YA DW + RK++ +
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 597 KGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVCL 641
+ K PG SWIEV N+ +SF++ D++HP ++Y L+ L L
Sbjct: 727 RNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 771
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 216/418 (51%), Gaps = 10/418 (2%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
++ LKVSA G+QLH IKFGF +S+ ++ Y+K +D K+FDE+
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
RNVV+W +I G A R++ ND ++ F RM E P+ TF +G + G
Sbjct: 157 RNVVTWTTLISGYA-RNSMNDE----VLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G+Q+H VK G D V +L++LY KCG V AR F + +V N MIS YA
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
N L EA MF +R++ E +F+S++ +C L+ + H +++ F D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 301 VASALINMYAKNENITDARGVFDEM-LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
+ +AL+ Y+K + DA +F E+ + NVV+W +I G E + L +M R+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
G P+E T S ++ A + + HA VK +++ +V +L+ AY K G + A
Sbjct: 392 GVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
K F ++ D+V W++++ YA G+ E A +MF ++ G+ P+ +F +L+ CA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 207/413 (50%), Gaps = 11/413 (2%)
Query: 110 DADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
+A LFD+ PGR+ S+ ++ G + RD + L ++ R+ +E D F+ +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFS-RDGRTQEAKRLFLN-IHRLGMEM---DCSIFSSV 99
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL 229
+ + G QLHC +K GF D VG +LVD Y K ++ R+ F + R++
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL 289
V +IS YA N + +E ++F ++ +G + FTF++ L V G H++
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
+++ D + V+++LIN+Y K N+ AR +FD+ +++VV WN++I G G E
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
L + M E + +S I LC + T Q H VK F ++ +L+ A
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 410 YSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
YSKC + AL+ F+ + ++V+WT++I + + E+A ++F +M GV P+ +
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+ +L+A +++ + ++ + Y+ S T L+D + G ++EA
Sbjct: 400 YSVILTALP---VISPSEVHAQVVKTNYE--RSSTVGTALLDAYVKLGKVEEA 447
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
+A +FD+ R+ ++ +++ G G E +L ++ R G D SS + +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
Q H +K F + +SV SL+ Y K N K F +E ++VTWT+
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL--HYFNLMTS 494
LI YA + ++ +F +M + G P+ +F L A G+ +GL H +
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+ + +P S+ L++L + G + +A L V+
Sbjct: 225 LDKTIPVSN---SLINLYLKCGNVRKARILFDKTEVK 258
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 295/574 (51%), Gaps = 36/574 (6%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N +L Y K I + + F++LP R+ V+WN++I G + V + M+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYS-----LSGLVGAAVKAYNTMM 130
Query: 156 LE-KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
+ VT ++ ++ +G Q+H +K+GF+ VG L+ +YA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 215 ENARRAFCAVPCRDLVMCN------------------------------VMISCYALNCL 244
+A++ F + R+ VM N MI A N L
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
+EA F +++ G D++ F S+L C L + GK H+ I+R F + V SA
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
LI+MY K + + A+ VFD M +NVV+W ++VG G G E +K+ DM R G PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
T+ IS C S++ E Q H A+ +++V+NSL++ Y KCG+I + + F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTK 484
D V+WT+++ AYA G+A + ++F+KM+ G+ PD V+ GV+SAC+ GLV K
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSC 544
G YF LMTS Y IVP HY+C++DL R G ++EA + MP ++ + +C
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 545 KLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPG 604
+ N+ + +WAAE L ++P Y +S+IYAS+ W V R+ + +K K PG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Query: 605 CSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
SWI+ ++HSF + D++ P ++YA L+ L+
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN 644
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 192/432 (44%), Gaps = 31/432 (7%)
Query: 47 QTLFRD--PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLK 104
T+ RD + + LK+S+ + GKQ+H +IK GF L + + +L +Y
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 105 CKEIEDADKLFDELPGRNVVSWNIMIRGVAG-----------RDNENDSS---------- 143
I DA K+F L RN V +N ++ G+ R E DS
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 144 ----APLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCF 199
A + F+ M ++ + D F ++ +C I G Q+H ++ F +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 200 VGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG 259
VG AL+D+Y KC + A+ F + +++V M+ Y EEA +F ++ G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDAR 319
+ D +T +S C + + G H + V V+++L+ +Y K +I D+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
+F+EM +R+ V+W ++ +G E ++L M++ G PD +T++ IS C A
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA- 485
Query: 380 AITETLQTHAIAVKLSFQEFLSVANS--LISAYSKCGNITSALKCFR-LTEEPDLVTWTS 436
+ E Q + + + S+ + +I +S+ G + A++ + PD + WT+
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 437 LIHAYAFHGQAE 448
L+ A G E
Sbjct: 546 LLSACRNKGNLE 557
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 66/266 (24%)
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
K+ H I+R + + + +++ YA ++ T AR VFD + N+ +WN +++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 344 GDGSEV-------------------------------LKLLRDMLREGFSPD--ELTISS 370
G SE+ +K M+R+ FS + +T+ +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRVTLMT 144
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVA--------------------------- 403
+ L ++ Q H +KL F+ +L V
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 404 ----NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
NSL+ CG I AL+ FR E+ D V+W ++I A +G A++A E F +M
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKG 485
G+ D+ F VL AC G + +G
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEG 289
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 219/672 (32%), Positives = 333/672 (49%), Gaps = 93/672 (13%)
Query: 59 FCANALKVSAKRAFLPEGKQL-HAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDE 117
C N L+ S ++ QL H +IK G + L N +++VY K A KLFDE
Sbjct: 15 LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE 74
Query: 118 LPGRNVVSWNIMIRGVAGRDN------------ENDSSA--PLCVSY------------F 151
+P R SWN ++ + R + + DS + + V Y
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
M+ E + P T ++ S + G ++H + VK+G + V +L+++YAKC
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 212 G-------------------------------LVENARRAFCAVPCRDLVMCNVMISCYA 240
G ++ A F + RD+V N MIS +
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 241 LNCLPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
A +F+ +LR + D FT +S+LS C LE IGK HS I+ FD
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 300 LVASALINMYA---------------------------------KNENITDARGVFDEML 326
+V +ALI+MY+ K ++ A+ +F +
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 327 IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
R+VVAW +IVG +G E + L R M+ G P+ T+++ +S+ ++++ Q
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE-EPDLVTWTSLIHAYAFHG 445
H AVK +SV+N+LI+ Y+K GNITSA + F L E D V+WTS+I A A HG
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 446 QAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY 505
AE+A E+FE ML G+ PD ++++GV SAC H GLV +G YF++M V +I+P HY
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 506 TCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEP 565
C+VDL GR GL+ EA E + MP+E + T G+ + +C++H NI L + AAE+L ++EP
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 566 EKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHP 625
E S Y+A++N+Y++ W + RK + D K G SWIEV ++VH F D THP
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 626 KALEMYATLKML 637
+ E+Y T+K +
Sbjct: 675 EKNEIYMTMKKI 686
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 142/347 (40%), Gaps = 86/347 (24%)
Query: 265 FTFSSLLSVCDTLEYYDIGK--------LAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+ S+LL +C L + K L H +++ V + + L+N+Y+K
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 317 DARGVFDEMLIRNVVAWNTI-------------------------------IVGCGNYGD 345
AR +FDEM +R +WNT+ IVG N G
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 346 GSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANS 405
+ ++++ DM++EG P + T+++ ++ + + H+ VKL + +SV+NS
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 406 LISAYSKCG---------------NITS----------------ALKCFRLTEEPDLVTW 434
L++ Y+KCG +I+S A+ F E D+VTW
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACA-----------HCGLV 482
S+I + G +A ++F KML ++ PDR + VLSACA H +V
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 483 TKGLH----YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
T G N + S+Y + L++ G L E F L
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 304/556 (54%), Gaps = 8/556 (1%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
KQ+HA L+ G L +++ +I A ++FD+LP + WN +IRG +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
++ D+ + + M L +V PD TF L+ +C ++ +G +H ++GFD
Sbjct: 98 NHFQDA-----LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPC--RDLVMCNVMISCYALNCLPEEAFSMFNL 254
D FV L+ LYAKC + +AR F +P R +V ++S YA N P EA +F+
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+R D S+L+ L+ G+ H+ +++ + + + +L MYAK
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ A+ +FD+M N++ WN +I G G E + + +M+ + PD ++I+S IS
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
C ++ + + + +++ + ++++LI ++KCG++ A F T + D+V W
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS 494
+++I Y HG+A +A ++ M GV P+ V+FLG+L AC H G+V +G +FN M
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD 452
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
++I P HY C++DLLGR G +D+A+E+++ MPV+ GA + +CK H ++ L E
Sbjct: 453 -HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGE 511
Query: 555 WAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
+AA++LF I+P + +Y +SN+YA+ R W V R + +KG K GCSW+EV ++
Sbjct: 512 YAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRL 571
Query: 615 HSFVSRDKTHPKALEM 630
+F DK+HP+ E+
Sbjct: 572 EAFRVGDKSHPRYEEI 587
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 192/405 (47%), Gaps = 20/405 (4%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD--ELPGR 121
LK + + L G+ +HA + + GF + +QN ++++Y KC+ + A +F+ LP R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+VSW ++ A + P+ + F +M V PD+V ++ + ++
Sbjct: 186 TIVSWTAIVSAYA------QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G +H VK+G +++ + +L +YAKCG V A+ F + +L++ N MIS YA
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
N EA MF+ + D + +S +S C + + + + + R + DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
++SALI+M+AK ++ AR VFD L R+VV W+ +IVG G +G E + L R M R G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 361 FSPDELTISSTISLCGYASAITE------TLQTHAIAVKLSFQEFLSVANSLISAYSKCG 414
P+++T + C ++ + E + H I + Q+ + L+
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ---QQHYACVIDLLGRAGHLD 476
Query: 415 NITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+KC + +P + W +L+ A H E +++ S
Sbjct: 477 QAYEVIKC--MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS 519
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 314/605 (51%), Gaps = 38/605 (6%)
Query: 63 ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRN 122
L AK G Q+H ++K G+ L +QN ++ Y +C E++ A K+FDE+ RN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL-EKVVPDYVTFNGLIGSCVQFHNIGV 181
VVSW MI G A RD D+ V F RM+ E+V P+ VT +I +C + ++
Sbjct: 200 VVSWTSMICGYARRDFAKDA-----VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G +++ + G +++ + ALVD+Y KC ++ A+R F +L +CN M S Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
L EA +FNL+ G D + S +S C L GK H +LR F+S +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD---------------- 345
+ALI+MY K A +FD M + VV WN+I+ G G+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 346 ------------GS---EVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHA 389
GS E +++ M +EG + D +T+ S S CG+ A+ +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
K Q + + +L+ +S+CG+ SA+ F D+ WT+ I A A G AE+
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A E+F+ M+ G+ PD V+F+G L+AC+H GLV +G F M ++ + P+ HY C+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
DLLGR GL++EA +L+ MP+E + + +C++ N+ +A +AAEK+ ++ PE++
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
+Y +SN+YAS W D+ R + +KG K PG S I++ + H F S D++HP+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 630 MYATL 634
+ A L
Sbjct: 735 IEAML 739
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 196/441 (44%), Gaps = 49/441 (11%)
Query: 126 WNIMIRGVAGRDNENDSSAPLC---VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
+N +IRG A S+ LC + F RM+ + PD TF + +C + G G
Sbjct: 102 YNSLIRGYA--------SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
IQ+H VK+G+ D FV +LV YA+CG +++AR+ F + R++V MI YA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 243 CLPEEAFSM-FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
++A + F ++R + + T ++S C LE + G+ ++ I + + L+
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
SAL++MY K I A+ +FDE N+ N + G E L + M+ G
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD +++ S IS C I H ++ F+ + ++ N+LI Y KC +A +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM------------------------ 457
F +VTW S++ Y +G+ + A E FE M
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 458 --LSC------GVVPDRVSFLGVLSACAHCGL--VTKGLHYFNLMTSVYQIVPDSDHYTC 507
+ C GV D V+ + + SAC H G + K ++Y+ I D T
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY---IEKNGIQLDVRLGTT 510
Query: 508 LVDLLGRYGLIDEAFELLRSM 528
LVD+ R G + A + S+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSL 531
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 192/456 (42%), Gaps = 43/456 (9%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
P++V + C + AK L G++++A + G + + ++ +Y+KC I+ A
Sbjct: 234 PNSVTMVCV--ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+LFDE N+ N M + ++ + F M+ V PD ++ I S
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREA-----LGVFNLMMDSGVRPDRISMLSAISS 346
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC--------------------- 211
C Q NI G H Y ++ GF+ + AL+D+Y KC
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 212 -----GLVEN-----ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGA 260
G VEN A F +P +++V N +IS L EEA +F ++ +G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
N D T S+ S C L D+ K + I + DV + + L++M+++ + A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
+F+ + R+V AW I G+ ++L DM+ +G PD + ++ C +
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 381 ITETLQTHAIAVKLSFQEFLSVA-NSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLI 438
+ + + +KL V ++ + G + A++ + EP+ V W SL+
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
A G E A EK+ + P+R +LS
Sbjct: 647 AACRVQGNVEMAAYAAEKIQV--LAPERTGSYVLLS 680
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
M N +I YA + L EA +F + G + D++TF LS C G H LI
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
++ + D+ V ++L++ YA+ + AR VFDEM RNVV+W ++I G + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 351 KLLRDMLR-EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
L M+R E +P+ +T+ IS C + + +A + + ++L+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y KC I A + F +L ++ Y G +A +F M+ GV PDR+S
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 470 LGVLSACAH 478
L +S+C+
Sbjct: 341 LSAISSCSQ 349
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 9/262 (3%)
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM---YAKNENITDARGVFDEM 325
S L C T+ D K+ H + +Q D+DV + L+ E+++ A+ VF+
Sbjct: 37 SSLKNCKTI---DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 326 LIRNV-VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET 384
+N++I G + G +E + L M+ G SPD+ T +S C + A
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
+Q H + VK+ + + L V NSL+ Y++CG + SA K F E ++V+WTS+I YA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 445 GQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD 503
A+ A ++F +M+ V P+ V+ + V+SACA + G + + + V D
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL- 272
Query: 504 HYTCLVDLLGRYGLIDEAFELL 525
+ LVD+ + ID A L
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLF 294
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 314/605 (51%), Gaps = 38/605 (6%)
Query: 63 ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRN 122
L AK G Q+H ++K G+ L +QN ++ Y +C E++ A K+FDE+ RN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL-EKVVPDYVTFNGLIGSCVQFHNIGV 181
VVSW MI G A RD D+ V F RM+ E+V P+ VT +I +C + ++
Sbjct: 200 VVSWTSMICGYARRDFAKDA-----VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G +++ + G +++ + ALVD+Y KC ++ A+R F +L +CN M S Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
L EA +FNL+ G D + S +S C L GK H +LR F+S +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD---------------- 345
+ALI+MY K A +FD M + VV WN+I+ G G+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 346 ------------GS---EVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHA 389
GS E +++ M +EG + D +T+ S S CG+ A+ +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
K Q + + +L+ +S+CG+ SA+ F D+ WT+ I A A G AE+
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A E+F+ M+ G+ PD V+F+G L+AC+H GLV +G F M ++ + P+ HY C+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
DLLGR GL++EA +L+ MP+E + + +C++ N+ +A +AAEK+ ++ PE++
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
+Y +SN+YAS W D+ R + +KG K PG S I++ + H F S D++HP+
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 630 MYATL 634
+ A L
Sbjct: 735 IEAML 739
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 196/441 (44%), Gaps = 49/441 (11%)
Query: 126 WNIMIRGVAGRDNENDSSAPLC---VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
+N +IRG A S+ LC + F RM+ + PD TF + +C + G G
Sbjct: 102 YNSLIRGYA--------SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
IQ+H VK+G+ D FV +LV YA+CG +++AR+ F + R++V MI YA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 243 CLPEEAFSM-FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
++A + F ++R + + T ++S C LE + G+ ++ I + + L+
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
SAL++MY K I A+ +FDE N+ N + G E L + M+ G
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD +++ S IS C I H ++ F+ + ++ N+LI Y KC +A +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM------------------------ 457
F +VTW S++ Y +G+ + A E FE M
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 458 --LSC------GVVPDRVSFLGVLSACAHCGL--VTKGLHYFNLMTSVYQIVPDSDHYTC 507
+ C GV D V+ + + SAC H G + K ++Y+ I D T
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY---IEKNGIQLDVRLGTT 510
Query: 508 LVDLLGRYGLIDEAFELLRSM 528
LVD+ R G + A + S+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSL 531
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 192/456 (42%), Gaps = 43/456 (9%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
P++V + C + AK L G++++A + G + + ++ +Y+KC I+ A
Sbjct: 234 PNSVTMVCV--ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+LFDE N+ N M + ++ + F M+ V PD ++ I S
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREA-----LGVFNLMMDSGVRPDRISMLSAISS 346
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC--------------------- 211
C Q NI G H Y ++ GF+ + AL+D+Y KC
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 212 -----GLVEN-----ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGA 260
G VEN A F +P +++V N +IS L EEA +F ++ +G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
N D T S+ S C L D+ K + I + DV + + L++M+++ + A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
+F+ + R+V AW I G+ ++L DM+ +G PD + ++ C +
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 381 ITETLQTHAIAVKLSFQEFLSVA-NSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLI 438
+ + + +KL V ++ + G + A++ + EP+ V W SL+
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
A G E A EK+ + P+R +LS
Sbjct: 647 AACRVQGNVEMAAYAAEKIQV--LAPERTGSYVLLS 680
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
M N +I YA + L EA +F + G + D++TF LS C G H LI
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
++ + D+ V ++L++ YA+ + AR VFDEM RNVV+W ++I G + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 351 KLLRDMLR-EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
L M+R E +P+ +T+ IS C + + +A + + ++L+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y KC I A + F +L ++ Y G +A +F M+ GV PDR+S
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 470 LGVLSACAH 478
L +S+C+
Sbjct: 341 LSAISSCSQ 349
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 9/262 (3%)
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM---YAKNENITDARGVFDEM 325
S L C T+ D K+ H + +Q D+DV + L+ E+++ A+ VF+
Sbjct: 37 SSLKNCKTI---DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 326 LIRNV-VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET 384
+N++I G + G +E + L M+ G SPD+ T +S C + A
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
+Q H + VK+ + + L V NSL+ Y++CG + SA K F E ++V+WTS+I YA
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 445 GQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD 503
A+ A ++F +M+ V P+ V+ + V+SACA + G + + + V D
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL- 272
Query: 504 HYTCLVDLLGRYGLIDEAFELL 525
+ LVD+ + ID A L
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLF 294
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 321/632 (50%), Gaps = 23/632 (3%)
Query: 14 TPILYSFVAQCFSNSSHQPHPWSRLR-----ASVSVPDQTLFRDPDTVHLFCANALKVSA 68
T + ++ + ++ +SH + R +S ++PD F T+ C +A+ +A
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF---TTLLPGCNDAVPQNA 165
Query: 69 KRAFLPEGKQLHAHLIKFGF--CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSW 126
Q+HA +K GF L++ N +L Y + + ++ A LF+E+P ++ V++
Sbjct: 166 V-------GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 127 NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
N +I G E D + F +M P TF+G++ + V H+ +G QLH
Sbjct: 219 NTLITGY-----EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
+V GF D VG ++D Y+K V R F +P D V NV+IS Y+ E
Sbjct: 274 ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE 333
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
+ F ++ G + F F+++LS+ L +G+ H L DS + V ++L+
Sbjct: 334 ASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLV 393
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDEL 366
+MYAK E +A +F + R V+W +I G G LKL M D+
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
T ++ + +++ Q HA ++ E + + L+ Y+KCG+I A++ F
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
+ + V+W +LI A+A +G E A F KM+ G+ PD VS LGVL+AC+HCG V +G
Sbjct: 514 PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKL 546
YF M+ +Y I P HY C++DLLGR G EA +L+ MP E + + + +C++
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633
Query: 547 HANIGLAEWAAEKLFIIEP-EKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGC 605
H N LAE AAEKLF +E + Y +MSNIYA+ +W V +K + ++G KVP
Sbjct: 634 HKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAY 693
Query: 606 SWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
SW+EV +++H F S D+THP E+ + L
Sbjct: 694 SWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 213/443 (48%), Gaps = 20/443 (4%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++S ++K ++ A LFD +P R VV+W I++ G R++ D + L F++M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM-GWYARNSHFDEAFKL----FRQMC 137
Query: 156 LEK--VVPDYVTFNGLIGSC---VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
+PD+VTF L+ C V + +G Q+H + VK+GFD + F+ + V L +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVG---QVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 211 CGL--VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
C + ++ A F +P +D V N +I+ Y + L E+ +F +R G +FTFS
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
+L L + +G+ H+L + F D V + +++ Y+K++ + + R +FDEM
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
+ V++N +I L R+M GF ++ +S+ S++ Q H
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
A+ + L V NSL+ Y+KC A F+ + V+WT+LI Y G
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 449 KATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--LVTKGLHYFNLMTSVYQIVPDSDHYT 506
++F KM + D+ +F VL A A L+ K LH F + + + V +
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG---S 491
Query: 507 CLVDLLGRYGLIDEAFELLRSMP 529
LVD+ + G I +A ++ MP
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMP 514
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 305/576 (52%), Gaps = 12/576 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ +H ++K GF V+ + N +L +Y +A+ +F ++P ++++SWN ++
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D+ LC M+ +YVTF + +C G LH V G
Sbjct: 323 DGRSLDALGLLC-----SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 377
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ +G ALV +Y K G + +RR +P RD+V N +I YA + P++A + F +
Sbjct: 378 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Query: 256 RMDGANGDEFTFSSLLSVC----DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
R++G + + T S+LS C D LE GK H+ I+ F+SD V ++LI MYAK
Sbjct: 438 RVEGVSSNYITVVSVLSACLLPGDLLER---GKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
+++ ++ +F+ + RN++ WN ++ ++G G EVLKL+ M G S D+ + S
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
+S + + E Q H +AVKL F+ + N+ YSKCG I +K + L
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
+W LI A HG E+ F +ML G+ P V+F+ +L+AC+H GLV KGL Y+++
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
+ + + P +H C++DLLGR G + EA + MP++ + + SCK+H N+
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 552 LAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVA 611
AAE L +EPE Y SN++A+ W DVE+ RK +G K K CSW+++
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 612 NQVHSFVSRDKTHPKALEMYATLKMLHVCLDTSCWL 647
++V SF D+THP+ +E+YA L+ + + S ++
Sbjct: 795 DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYV 830
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 5/406 (1%)
Query: 71 AFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
+ EG Q+H + K G + + IL +Y + + K+F+E+P RNVVSW ++
Sbjct: 56 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 115
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G + + + + +K M E V + + + +I SC + +G Q+ V
Sbjct: 116 VGYSDKGEPEE-----VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K G + V +L+ + G V+ A F + RD + N + + YA N EE+F
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F+L+R + T S+LLSV +++ G+ H L+++ FDS V V + L+ MYA
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
+A VF +M +++++WN+++ N G + L LL M+ G S + +T +S
Sbjct: 291 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTS 350
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
++ C + H + V + N+L+S Y K G ++ + + D
Sbjct: 351 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 410
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
+V W +LI YA +KA F+ M GV + ++ + VLSAC
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 11/392 (2%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
F +G+ LH ++ G + + N ++S+Y K E+ ++ ++ ++P R+VV+WN +I
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IGVGIQLHCYTV 190
G A D ++ F+ M +E V +Y+T ++ +C+ + + G LH Y V
Sbjct: 420 GYA-----EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
GF+ D V +L+ +YAKCG + +++ F + R+++ N M++ A + EE
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 534
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+ + +R G + D+F+FS LS L + G+ H L ++ F+ D + +A +MY+
Sbjct: 535 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS 594
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K I + + + R++ +WN +I G +G EV +ML G P +T S
Sbjct: 595 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 654
Query: 371 TISLCGYASAITETLQTH-AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEE 428
++ C + + + L + IA + + +I + G + A ++ +
Sbjct: 655 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 714
Query: 429 PDLVTWTSLIHAYAFHG---QAEKATEMFEKM 457
P+ + W SL+ + HG + KA E K+
Sbjct: 715 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 746
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 224 VPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD-TLEYYDI 282
+P R+ V N M+S L E F + G F +SL++ C + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
G H + + SDV V++A++++Y ++ +R VF+EM RNVV+W +++VG +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSV 402
G+ EV+ + + M EG +E ++S IS CG + Q VK + L+V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 403 ANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
NSLIS GN+ A F E D ++W S+ AYA +G E++ +F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 325 MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA-SAITE 383
M +RN V+WNT++ G G E ++ R M G P I+S ++ CG + S E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 384 TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAF 443
+Q H K + V+ +++ Y G ++ + K F + ++V+WTSL+ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 444 HGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD 503
G+ E+ ++++ M GV + S V+S+ CGL+ ++ V + +S
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISS---CGLLKDESLGRQIIGQVVKSGLESK 177
Query: 504 HY--TCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
L+ +LG G +D A + M E DT+
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMS---ERDTI 210
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 10/213 (4%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
+ L +AK A L EG+QLH +K GF H + N +Y KC EI + K+
Sbjct: 552 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
R++ SWNI+I + GR + +C + F ML + P +VTF L+ +C +
Sbjct: 612 RSLPSWNILISAL-GRHGYFEE---VCAT-FHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 181 VGIQLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARRAFCAVPCR--DLVMCNVMI 236
G+ + + F L+ + ++DL + G + A +P + DLV +++
Sbjct: 667 KGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSS 269
SC L + NL +++ + + SS
Sbjct: 726 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 305/576 (52%), Gaps = 12/576 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ +H ++K GF V+ + N +L +Y +A+ +F ++P ++++SWN ++
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D+ LC M+ +YVTF + +C G LH V G
Sbjct: 340 DGRSLDALGLLC-----SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 394
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ +G ALV +Y K G + +RR +P RD+V N +I YA + P++A + F +
Sbjct: 395 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Query: 256 RMDGANGDEFTFSSLLSVC----DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
R++G + + T S+LS C D LE GK H+ I+ F+SD V ++LI MYAK
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDLLER---GKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
+++ ++ +F+ + RN++ WN ++ ++G G EVLKL+ M G S D+ + S
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
+S + + E Q H +AVKL F+ + N+ YSKCG I +K + L
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
+W LI A HG E+ F +ML G+ P V+F+ +L+AC+H GLV KGL Y+++
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
+ + + P +H C++DLLGR G + EA + MP++ + + SCK+H N+
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 552 LAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVA 611
AAE L +EPE Y SN++A+ W DVE+ RK +G K K CSW+++
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 612 NQVHSFVSRDKTHPKALEMYATLKMLHVCLDTSCWL 647
++V SF D+THP+ +E+YA L+ + + S ++
Sbjct: 812 DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYV 847
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 210/436 (48%), Gaps = 19/436 (4%)
Query: 101 VYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVSYFKRMLLEK 158
+Y K ++ A LFD +P RN VSWN M+ G+ G E + +F++M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEG-------MEFFRKMCDLG 53
Query: 159 VVPDYVTFNGLIGSCVQFHNI-GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
+ P L+ +C + ++ G+Q+H + K G D +V A++ LY GLV +
Sbjct: 54 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 113
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
R+ F +P R++V ++ Y+ PEE ++ +R +G +E + S ++S C L
Sbjct: 114 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 173
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
+ +G+ +++ +S + V ++LI+M N+ A +FD+M R+ ++WN+I
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G E ++ M R + T+S+ +S+ G+ H + VK+ F
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
+ V N+L+ Y+ G A F+ DL++W SL+ ++ G++ A + M
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVY--QIVPDSDHYTCLVDLLG 513
+S G + V+F L+AC KG LH +++ ++ QI+ ++ LV + G
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-----LVSMYG 408
Query: 514 RYGLIDEAFELLRSMP 529
+ G + E+ +L MP
Sbjct: 409 KIGEMSESRRVLLQMP 424
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 5/406 (1%)
Query: 71 AFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
+ EG Q+H + K G + + IL +Y + + K+F+E+P RNVVSW ++
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G + + + + +K M E V + + + +I SC + +G Q+ V
Sbjct: 133 VGYSDKGEPEE-----VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K G + V +L+ + G V+ A F + RD + N + + YA N EE+F
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F+L+R + T S+LLSV +++ G+ H L+++ FDS V V + L+ MYA
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
+A VF +M +++++WN+++ N G + L LL M+ G S + +T +S
Sbjct: 308 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTS 367
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
++ C + H + V + N+L+S Y K G ++ + + D
Sbjct: 368 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 427
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
+V W +LI YA +KA F+ M GV + ++ + VLSAC
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 11/392 (2%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
F +G+ LH ++ G + + N ++S+Y K E+ ++ ++ ++P R+VV+WN +I
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IGVGIQLHCYTV 190
G A D ++ F+ M +E V +Y+T ++ +C+ + + G LH Y V
Sbjct: 437 GYA-----EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 491
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
GF+ D V +L+ +YAKCG + +++ F + R+++ N M++ A + EE
Sbjct: 492 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 551
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+ + +R G + D+F+FS LS L + G+ H L ++ F+ D + +A +MY+
Sbjct: 552 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS 611
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K I + + + R++ +WN +I G +G EV +ML G P +T S
Sbjct: 612 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 671
Query: 371 TISLCGYASAITETLQTH-AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEE 428
++ C + + + L + IA + + +I + G + A ++ +
Sbjct: 672 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 731
Query: 429 PDLVTWTSLIHAYAFHG---QAEKATEMFEKM 457
P+ + W SL+ + HG + KA E K+
Sbjct: 732 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 763
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 10/213 (4%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
+ L +AK A L EG+QLH +K GF H + N +Y KC EI + K+
Sbjct: 569 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 628
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
R++ SWNI+I + GR + +C + F ML + P +VTF L+ +C +
Sbjct: 629 RSLPSWNILISAL-GRHGYFEE---VCAT-FHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 181 VGIQLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARRAFCAVPCR--DLVMCNVMI 236
G+ + + F L+ + ++DL + G + A +P + DLV +++
Sbjct: 684 KGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSS 269
SC L + NL +++ + + SS
Sbjct: 743 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 302/569 (53%), Gaps = 11/569 (1%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
+G ++H +KFGF + + ++ +Y + K + +A LFDE+P R++ SWN MI G
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
N ++ L +S R + D VT L+ +C + + G+ +H Y++K G
Sbjct: 228 QSGNAKEA---LTLSNGLRAM------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ + FV L+DLYA+ G + + ++ F + RDL+ N +I Y LN P A S+F
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVASALINMYAKNE 313
+R+ D T SL S+ L + LR+ F D+ + +A++ MYAK
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTI 372
+ AR VF+ + +V++WNTII G G SE +++ M EG + ++ T S +
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
C A A+ + ++ H +K + V SL Y KCG + AL F + V
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
W +LI + FHG EKA +F++ML GV PD ++F+ +LSAC+H GLV +G F +M
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
+ Y I P HY C+VD+ GR G ++ A + ++SM ++ ++ GA + +C++H N+ L
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 638
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
+ A+E LF +EPE + +SN+YAS W V+ R + KG K PG S +EV N
Sbjct: 639 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
Query: 613 QVHSFVSRDKTHPKALEMYATLKMLHVCL 641
+V F + ++THP EMY L L L
Sbjct: 699 KVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 251/529 (47%), Gaps = 39/529 (7%)
Query: 9 KQLHFTPILYSF--VAQCFSNSSHQPHP-WSRLRASVSVPD-QTLFRDPDTVHLFCANAL 64
K FT +L S V + FS S++ W S + D TLFR +C N
Sbjct: 16 KGGRFTRVLQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFR-------YCTN-- 66
Query: 65 KVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVV 124
L K LHA L+ + + +++++Y + A FD + R+V
Sbjct: 67 --------LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
+WN+MI G GR N S C S F ML + PDY TF ++ +C + G +
Sbjct: 119 AWNLMISGY-GRAG-NSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNK 171
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
+HC +K GF D +V +L+ LY++ V NAR F +P RD+ N MIS Y +
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
+EA ++ N LR D T SLLS C ++ G HS ++ +S++ V++
Sbjct: 232 AKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
LI++YA+ + D + VFD M +R++++WN+II + L ++M PD
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLS-FQEFLSVANSLISAYSKCGNITSALKCF 423
LT+ S S+ I ++ F E +++ N+++ Y+K G + SA F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG-VVPDRVSFLGVLSACAHCGLV 482
D+++W ++I YA +G A +A EM+ M G + ++ +++ VL AC+ G +
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 483 TKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+G LH L +Y D T L D+ G+ G +++A L +P
Sbjct: 468 RQGMKLHGRLLKNGLYL---DVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
+L C L+ K H+ ++ +V +++ L+N+Y N+ AR FD + R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLR-DMLREGFSPDELTISSTISLCGYASAITETLQT 387
+V AWN +I G G G+ SEV++ ML G +PD T S + C + + +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
H +A+K F + VA SLI YS+ + +A F D+ +W ++I Y G A
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHY 505
++A + + + D V+ + +LSAC G +G +H +++ + + S+
Sbjct: 233 KEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK- 287
Query: 506 TCLVDLLGRYGLIDEAFELLRSMPVE 531
L+DL +G + + ++ M V
Sbjct: 288 --LIDLYAEFGRLRDCQKVFDRMYVR 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 155/405 (38%), Gaps = 73/405 (18%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
+ L ++ L +G +LH L+K G + + + +Y KC +EDA LF ++P
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 122 NVVSWNIMI--RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
N V WN +I G G + V FK ML E V PD++TF L+ +C +
Sbjct: 516 NSVPWNTLIACHGFHGHGEK-------AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 180 GVG---IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI 236
G ++ + L + GC +VD+Y + G +E A
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHY-GC-MVDMYGRAGQLETA------------------- 607
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
++ D + +LLS C D+GK+A S L +
Sbjct: 608 ---------------LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA-SEHLFEVEP 651
Query: 297 SDVLVASALINMYA---KNENITDARGVFDEMLIRNVVAWNTIIV--GCGNYGDGSEVLK 351
V L NMYA K E + + R + +R W+++ V + G++
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 711
Query: 352 LLRDMLRE-----------GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFL 400
+ +M RE G+ PD + + L +H+ + ++F
Sbjct: 712 MYEEMYRELTALQAKLKMIGYVPDHRFVLQDVE----DDEKEHILMSHSERLAIAFALIA 767
Query: 401 SVANSLISAYSK---CGNITSALKCF-RLTEEPDLVTWTSLIHAY 441
+ A + I + CG+ S K ++TE +V ++ H +
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHF 812
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 189/619 (30%), Positives = 305/619 (49%), Gaps = 75/619 (12%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
Q HA ++K G + + ++++ Y DAD + +P + S++ +I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 138 NENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLD 197
S + F RM ++PD L C + VG Q+HC + G D+D
Sbjct: 96 LFTQS-----IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 198 CFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN-CLPE---------- 246
FV ++ +Y +CG + +AR+ F + +D+V C+ ++ YA CL E
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 247 ------------------------EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
EA MF + G D+ T SS+L E ++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-------------- 328
G+L H +++Q D V SA+I+MY K+ ++ +F++ +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 329 ---------------------NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
NVV+W +II GC G E L+L R+M G P+ +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE 427
I S + CG +A+ TH AV++ + + V ++LI Y+KCG I + F +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+LV W SL++ ++ HG+A++ +FE ++ + PD +SF +LSAC GL +G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLH 547
YF +M+ Y I P +HY+C+V+LLGR G + EA++L++ MP E +S GA + SC+L
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 548 ANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
N+ LAE AAEKLF +EPE Y +SNIYA++ W +V+S R + G K PGCSW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 608 IEVANQVHSFVSRDKTHPK 626
I+V N+V++ ++ DK+HP+
Sbjct: 631 IQVKNRVYTLLAGDKSHPQ 649
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 57 HLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD 116
H+ + L A L G+ H ++ + + + ++ +Y KC I + +F+
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 117 ELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
+P +N+V WN ++ G + A +S F+ ++ ++ PD+++F L+ +C Q
Sbjct: 448 MMPTKNLVCWNSLMNGFSMH-----GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 301/564 (53%), Gaps = 8/564 (1%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+ +HAHLIK F + + + +++KC ++ A K+F+ +P R+ +WN M+ G
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
+ + + S F+ M L ++ PD VT LI S ++ + +H +++G D+
Sbjct: 132 GHTDKA-----FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPC--RDLVMCNVMISCYALNCLPEEAFSMFNL 254
V + Y KCG +++A+ F A+ R +V N M Y++ +AF ++ L
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+ + D TF +L + C E G+L HS + D D+ + I+MY+K+E+
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
AR +FD M R V+W +I G GD E L L M++ G PD +T+ S IS
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 375 CGYASAITETLQTHAIA-VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
CG ++ A A + ++ + + N+LI YSKCG+I A F T E +VT
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMT 493
WT++I YA +G +A ++F KM+ P+ ++FL VL ACAH G + KG YF++M
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 494 SVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLA 553
VY I P DHY+C+VDLLGR G ++EA EL+R+M + ++ GA + +CK+H N+ +A
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 554 EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQ 613
E AAE LF +EP+ + Y M+NIYA+ W R ++ + K PG S I+V +
Sbjct: 547 EQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Query: 614 VHSFVSRDKTHPKALEMYATLKML 637
HSF + H + +Y TL L
Sbjct: 607 NHSFTVGEHGHVENEVIYFTLNGL 630
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 194/411 (47%), Gaps = 9/411 (2%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
+V +WN+ IR N ND L + F+ M P+ TF + +C + ++G
Sbjct: 16 SVNAWNLQIREAV---NRNDPVESLLL--FREMKRGGFEPNNFTFPFVAKACARLADVGC 70
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
+H + +K F D FVG A VD++ KC V+ A + F +P RD N M+S +
Sbjct: 71 CEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
+ ++AFS+F +R++ D T +L+ + + + H++ +R D V V
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 302 ASALINMYAKNENITDARGVFD--EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
A+ I+ Y K ++ A+ VF+ + R VV+WN++ +G+ + L MLRE
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
F PD T + + C +T+ H+ A+ L + + N+ IS YSK + SA
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
F + V+WT +I YA G ++A +F M+ G PD V+ L ++S C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHY-TCLVDLLGRYGLIDEAFELLRSMP 529
G + G + + +Y D+ L+D+ + G I EA ++ + P
Sbjct: 371 GSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 39/348 (11%)
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG--KLAHSLILRQAFDSDVLVA 302
P E+ +F ++ G + FTF + C L D+G ++ H+ +++ F SDV V
Sbjct: 33 PVESLLLFREMKRGGFEPNNFTFPFVAKACARLA--DVGCCEMVHAHLIKSPFWSDVFVG 90
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+A ++M+ K ++ A VF+ M R+ WN ++ G G + L R+M +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
PD +T+ + I + ++ HA+ ++L ++VAN+ IS Y KCG++ SA
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 423 FRLTEEPD--LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
F + D +V+W S+ AY+ G+A A ++ ML PD +F+ + ++C +
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 481 LVTKG---------------LHYFNLMTSVYQIVPDSDHYTCLVDLL------------- 512
+T+G + N S+Y D+ L D++
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 513 --GRYGLIDEAFELLRSMPVEVESD---TLGAFIGSCKLHANIGLAEW 555
G +DEA L +M E TL + I C ++ +W
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 327 IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
+ +V AWN I N D E L L R+M R GF P+ T C + +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
HA +K F + V + + + KC ++ A K F E D TW +++ + G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
+KA +F +M + PD V+ + ++ + +
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 312/619 (50%), Gaps = 52/619 (8%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHAHLIKF-GFCHVLSLQNQILSVYLKCKEIEDADKL 114
+ N ++ +K + KQLHA I+ H + + ++S+Y K + +A L
Sbjct: 8 IKTLIKNPTRIKSK----SQAKQLHAQFIRTQSLSHTSA--SIVISIYTNLKLLHEALLL 61
Query: 115 FDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCV 174
F L V++W +IR + S ++ F M PD+ F ++ SC
Sbjct: 62 FKTLKSPPVLAWKSVIRCFT-----DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 175 QFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC-GL-------------------- 213
++ G +H + V++G D D + G AL+++YAK G+
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNS 176
Query: 214 ---------------VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
+++ RR F +P +D+V N +I+ YA + + E+A M +
Sbjct: 177 GDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 259 GANGDEFTFSSLLSVCDTLEYYDI--GKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
D FT SS+L + EY D+ GK H ++R+ DSDV + S+L++MYAK+ I
Sbjct: 237 DLKPDSFTLSSVLPIFS--EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
D+ VF + R+ ++WN+++ G G +E L+L R M+ P + SS I C
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
+ + + Q H ++ F + +A++L+ YSKCGNI +A K F D V+WT+
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I +A HG +A +FE+M GV P++V+F+ VL+AC+H GLV + YFN MT VY
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+ + +HY + DLLGR G ++EA+ + M VE + SC +H N+ LAE
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHS 616
AEK+F ++ E Y M N+YAS W ++ R + KG K P CSWIE+ N+ H
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 617 FVSRDKTHPKALEMYATLK 635
FVS D++HP ++ LK
Sbjct: 595 FVSGDRSHPSMDKINEFLK 613
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 168/332 (50%), Gaps = 18/332 (5%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD+ L ++ L + ++ + +GK++H ++I+ G + + + ++ +Y K IED++
Sbjct: 240 PDSFTL--SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 113 KLFDELPGRNVVSWNIMIRGVA--GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
++F L R+ +SWN ++ G GR NE + F++M+ KV P V F+ +I
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNE-------ALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C + +G QLH Y ++ GF + F+ ALVD+Y+KCG ++ AR+ F + D V
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSL 289
+I +AL+ EA S+F ++ G ++ F ++L+ C + D +S+
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA-WNTIIVGCGNYGDGSE 348
+ ++ +A+ ++ + + +A +M + + W+T++ C + +
Sbjct: 471 TKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN--- 527
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCG-YAS 379
L+L + + F+ D + + + +C YAS
Sbjct: 528 -LELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 299/548 (54%), Gaps = 13/548 (2%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N I+ Y K +I A +LFDE+P + VS+N +I G A + ++ A + + FKRM
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA---DARETFAAMVL--FKRMR 132
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
D T +GLI +C + + QLHC++V GFD V A V Y+K GL+
Sbjct: 133 KLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 216 NARRAFCAV-PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
A F + RD V N MI Y + +A +++ + G D FT +S+L+
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN---ENITDARGVFDEMLIRNVV 331
+L++ G+ H +++ F + V S LI+ Y+K + + D+ VF E+L ++V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 332 AWNTIIVGCG-NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
WNT+I G N E +K R M R G PD+ + S C S+ ++ Q H +
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 391 AVKLSF-QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
A+K +SV N+LIS Y K GN+ A F E + V++ +I YA HG +
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A ++++ML G+ P++++F+ VLSACAHCG V +G YFN M ++I P+++HY+C++
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
DLLGR G ++EA + +MP + S A +G+C+ H N+ LAE AA +L +++P +
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
Y ++N+YA R W ++ S RK + K K PGCSWIEV + H FV+ D +HP E
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 630 MYATLKML 637
+ L+ +
Sbjct: 611 VNEYLEEM 618
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 279 YYDIGKLAHSLILRQAF----DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
Y G+L+++ R AF + +V + ++ YAK+ I AR +FDE+ + V++N
Sbjct: 53 YSKCGRLSYA---RAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYN 109
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
T+I G + + + L + M + GF D T+S I+ C + Q H +V
Sbjct: 110 TLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSG 167
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
F + SV N+ ++ YSK G + A+ F + E D V+W S+I AY H + KA +
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 454 FEKMLSCGVVPDRVSFLGVLSACA-----------HCGLVTKGLH 487
+++M+ G D + VL+A H L+ G H
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 12/272 (4%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLK---CKEIEDADKLFDELPGRNVVSWNIMIRG 132
G+Q H LIK GF + + ++ Y K C + D++K+F E+ ++V WN MI G
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+ N+ + V F++M PD +F + +C + Q+H +K
Sbjct: 319 YS----MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 193 GFDLDCF-VGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
+ V AL+ LY K G +++AR F +P + V N MI YA + EA +
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF--DSDVLVASALINMY 309
+ + G ++ TF ++LS C D G+ + +++ F + + S +I++
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ-EYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 310 AKNENITDARGVFDEMLIR-NVVAWNTIIVGC 340
+ + +A D M + VAW ++ C
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 302/589 (51%), Gaps = 14/589 (2%)
Query: 54 DTVHLFCANALKVSAKRAFLPEGKQLHAHLIK-FGFCHVLSLQNQILSVYLKCKEIEDAD 112
D + L NA+ S+ R G+ +HA ++K L N ++++Y K E A
Sbjct: 7 DALGLLLKNAISASSMRL----GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESAR 62
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+ P RNVVSW +I G+A +N + V +F+ M E VVP+ TF +
Sbjct: 63 LVLRLTPARNVVSWTSLISGLA----QNGHFSTALVEFFE-MRREGVVPNDFTFPCAFKA 117
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
G Q+H VK G LD FVGC+ D+Y K L ++AR+ F +P R+L
Sbjct: 118 VASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETW 177
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
N IS + P EA F R + + TF + L+ C + ++G H L+LR
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG-CGNYGDGSEVLK 351
FD+DV V + LI+ Y K + I + +F EM +N V+W +++ N+ D +
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
LR ++ + ISS +S C + + HA AVK + + V ++L+ Y
Sbjct: 298 YLRSR-KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML--SCGVVPDRVSF 469
KCG I + + F E +LVT SLI YA GQ + A +FE+M CG P+ ++F
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ +LSAC+ G V G+ F+ M S Y I P ++HY+C+VD+LGR G+++ A+E ++ MP
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
Query: 530 VEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVES 589
++ GA +C++H L AAE LF ++P+ S N+ +SN +A+ W + +
Sbjct: 477 IQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANT 536
Query: 590 ARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
R+ + G K G SWI V NQVH+F ++D++H E+ TL L
Sbjct: 537 VREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR 585
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 305/551 (55%), Gaps = 11/551 (1%)
Query: 90 HVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
H+L+ N I+S Y + +E+A LFDE+P R+VV+W MI G A + ++ A C
Sbjct: 45 HILA-TNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNY--NARAWEC-- 98
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
F M+ + P+ T + ++ SC + G +H VK+G + +V A++++YA
Sbjct: 99 -FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 210 KCGL-VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
C + +E A F + ++ V +I+ + M+ + ++ A + +
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
+ +++ GK H+ ++++ F S++ V ++++++Y + +++A+ F EM +
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
+++ WNT+I D SE L + + +GF P+ T +S ++ C +A+ Q H
Sbjct: 278 DLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQA 447
+ F + + +AN+LI Y+KCGNI + + F + + +LV+WTS++ Y HG
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
+A E+F+KM+S G+ PDR+ F+ VLSAC H GLV KGL YFN+M S Y I PD D Y C
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 456
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL-AEWAAEKLFIIEPE 566
+VDLLGR G I EA+EL+ MP + + T GA +G+CK H + GL + AA K+ ++P+
Sbjct: 457 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK 516
Query: 567 KSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
Y +S IYA++ W D RKM+ G+ K G SWI V NQV SF DK P
Sbjct: 517 MVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPN 576
Query: 627 ALEMYATLKML 637
A +Y+ L +L
Sbjct: 577 ASSVYSVLGLL 587
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 145/303 (47%), Gaps = 21/303 (6%)
Query: 47 QTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCK 106
Q L + + A++ SA + GKQ+HA +IK GF L + N IL +Y +C
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 107 EIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
+ +A F E+ +++++WN +I + +DSS L + F+R + VP+ TF
Sbjct: 263 YLSEAKHYFHEMEDKDLITWNTLISEL----ERSDSSEALLM--FQRFESQGFVPNCYTF 316
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCA-VP 225
L+ +C + G QLH + GF+ + + AL+D+YAKCG + +++R F V
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC-------DTLE 278
R+LV M+ Y + EA +F+ + G D F ++LS C L+
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTII 337
Y+++ + + + + D + + ++++ + I +A + + M + + W I+
Sbjct: 437 YFNVMESEYGI------NPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Query: 338 VGC 340
C
Sbjct: 491 GAC 493
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 303/578 (52%), Gaps = 13/578 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L+V ++ +G Q+H +L+K G L N ++ +Y KC+E A K+FD +P RNV
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSW+ ++ G + S +S F M + + P+ TF+ + +C + + G+
Sbjct: 73 VSWSALMSGHVLNGDLKGS-----LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
Q+H + +K+GF++ VG +LVD+Y+KCG + A + F + R L+ N MI+ +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 244 LPEEAFSMFNLLRMDGAN----GDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD--S 297
+A F + M AN DEFT +SLL C + GK H ++R F S
Sbjct: 188 YGSKALDTFGM--MQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
+ +L+++Y K + AR FD++ + +++W+++I+G G+ E + L + +
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
D +SS I + + + + Q A+AVKL SV NS++ Y KCG +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
A KCF + D+++WT +I Y HG +K+ +F +ML + PD V +L VLSAC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 478 HCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
H G++ +G F+ + + I P +HY C+VDLLGR G + EA L+ +MP++
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 538 GAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDK 597
+ C++H +I L + + L I+ + NY MSN+Y W + +AR++ K
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 598 GDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLK 635
G K G SW+E+ +VH F S + +HP + TLK
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
S+L VC D G H +L+ +++ ++ LI+MY K A VFD M R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
NVV+W+ ++ G GD L L +M R+G P+E T S+ + CG +A+ + LQ H
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
+K+ F+ + V NSL+ YSKCG I A K FR + L++W ++I + G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 449 KATEMFEKMLSCGVV--PDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDH 504
KA + F M + PD + +L AC+ G++ G +H F L+ S + +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF-LVRSGFHCPSSATI 249
Query: 505 YTCLVDL 511
LVDL
Sbjct: 250 TGSLVDL 256
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
++ + V A A L +GKQ+ A +K S+ N ++ +YLKC +++A+K F E+
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL 376
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
++V+SW ++I G G+ S V F ML + PD V + ++ +C I
Sbjct: 377 KDVISWTVVITGY-GKHGLGKKS----VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 181 VGIQLHCYTVKV-GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
G +L ++ G +VDL + G ++ A+ +P +
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 273/515 (53%), Gaps = 7/515 (1%)
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL 185
WN+ +R +A + ++S +S ++ ML PD +F ++ SC G QL
Sbjct: 21 WNVRLRELAYQSLFSES-----ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP-CRDLVMC-NVMISCYALNC 243
HC+ K G + + FV AL+ +Y KCGLV +AR+ F P L +C N +IS Y N
Sbjct: 76 HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
+A MF ++ G + D T L+ +C EY +G+ H ++ DS+V V +
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+ I MY K ++ R +FDEM ++ ++ WN +I G G +VL+L M G P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D T+ S +S C + A + + F + V+N+ IS Y++CGN+ A F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT 483
+ LV+WT++I Y HG E +F+ M+ G+ PD F+ VLSAC+H GL
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 484 KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGS 543
KGL F M Y++ P +HY+CLVDLLGR G +DEA E + SMPVE + GA +G+
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 544 CKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVP 603
CK+H N+ +AE A K+ EP Y MSNIY+ ++ + R M+ ++ K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 604 GCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
G S++E +VH F++ D++H + E++ L L
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE 530
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 198/416 (47%), Gaps = 13/416 (3%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A + G+QLH H+ K G + ++S+Y KC + DA K+F+E P +
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 124 VS--WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
+S +N +I G D++ F+RM V D VT GL+ C + +
Sbjct: 120 LSVCYNALISGYTANSKVTDAAY-----MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G LH VK G D + V + + +Y KCG VE RR F +P + L+ N +IS Y+
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
N L + ++ ++ G D FT S+LS C L IG L+ F +V V
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC-GNYGDGSEVLKLLRDMLREG 360
++A I+MYA+ N+ AR VFD M ++++V+W T ++GC G +G G L L DM++ G
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSW-TAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 361 FSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
PD +S C ++ + L+ A+ + + + L+ + G + A
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 420 LKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
++ + EPD W +L+ A H + A F K++ P+ + + ++S
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMS 467
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 303/607 (49%), Gaps = 53/607 (8%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ HA + GF + + N ++++Y +C+ + DA K+FDE+ +VVSWN +I A
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA- 204
Query: 136 RDNENDSSAPLCVSYFKRMLLE-KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
+ + F RM E PD +T ++ C +G QLHC+ V
Sbjct: 205 ----KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ FVG LVD+YAKCG+++ A F + +D+V N M++ Y+ E+A +F
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 255 L-----RMD------------------------------GANGDEFTFSSLLSVCDTLEY 279
+ +MD G +E T S+LS C ++
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 280 YDIGKLAHSLILRQAFD-------SDVLVASALINMYAKNENITDARGVFDEMLI--RNV 330
GK H ++ D + +V + LI+MYAK + + AR +FD + R+V
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 440
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREG--FSPDELTISSTISLCGYASAITETLQTH 388
V W +I G +GD ++ L+LL +M E P+ TIS + C +A+ Q H
Sbjct: 441 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 500
Query: 389 AIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
A A++ L V+N LI Y+KCG+I+ A F + VTWTSL+ Y HG
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
E+A +F++M G D V+ L VL AC+H G++ +G+ YFN M +V+ + P +HY C
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
LVDLLGR G ++ A L+ MP+E AF+ C++H + L E+AAEK+ +
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 568 SVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKA 627
+Y +SN+YA+ W DV R ++ KG K PGCSW+E +F DKTHP A
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740
Query: 628 LEMYATL 634
E+Y L
Sbjct: 741 KEIYQVL 747
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/574 (25%), Positives = 244/574 (42%), Gaps = 76/574 (13%)
Query: 56 VHLFCANALKVSA----KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
V LF +A +++ K + + K +H L+ FG L+L + ++S Y+ + A
Sbjct: 20 VSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHA 78
Query: 112 DKLFDELPGRN--VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
L P + V WN +IR ++ A C+ F M PD TF +
Sbjct: 79 VSLLRRFPPSDAGVYHWNSLIRSYG-----DNGCANKCLYLFGLMHSLSWTPDNYTFPFV 133
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL 229
+C + ++ G H ++ GF + FVG ALV +Y++C + +AR+ F + D+
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMD-GANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
V N +I YA P+ A MF+ + + G D T ++L C +L + +GK H
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD--- 345
+ ++ V + L++MYAK + +A VF M +++VV+WN ++ G G
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 346 --------------------------------GSEVLKLLRDMLREGFSPDELTISSTIS 373
G E L + R ML G P+E+T+ S +S
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 374 LCGYASAITETLQTHAIAVKLSFQ-------EFLSVANSLISAYSKCGNITSALKCFR-- 424
C A+ + H A+K + V N LI Y+KC + +A F
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS--CGVVPDRVSFLGVLSACAHCGL- 481
+E D+VTWT +I Y+ HG A KA E+ +M C P+ + L ACA
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 482 -VTKGLHYF---NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
+ K +H + N +V V + CL+D+ + G I +A + +M + E
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSN-----CLIDMYAKCGSISDARLVFDNMMAKNE---- 544
Query: 538 GAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNY 571
+ L G+ + E L I + + + +
Sbjct: 545 ---VTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 304/569 (53%), Gaps = 12/569 (2%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
+ +G+ LH +K G V+ + N ++++YLK + DA ++FDE+ R+ VS+N MI G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKV---VPDYVTFNGLIGSCVQFHNIGVGIQLHCYT 189
+ +S RM LE + PD +T + ++ +C ++ + ++ Y
Sbjct: 283 YLKLEMVEESV---------RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 190 VKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF 249
+K GF L+ V L+D+YAKCG + AR F ++ C+D V N +IS Y + EA
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 250 SMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
+F ++ + D T+ L+SV L GK HS ++ D+ V++ALI+MY
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 310 AKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
AK + D+ +F M + V WNT+I C +GD + L++ M + PD T
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
T+ +C +A + H ++ ++ L + N+LI YSKCG + ++ + F
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
D+VTWT +I+AY +G+ EKA E F M G+VPD V F+ ++ AC+H GLV +GL F
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACF 633
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
M + Y+I P +HY C+VDLL R I +A E +++MP++ ++ + + +C+ +
Sbjct: 634 EKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGD 693
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ AE + ++ + P+ SN YA+ R W V RK + DK K PG SWIE
Sbjct: 694 METAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Query: 610 VANQVHSFVSRDKTHPKALEMYATLKMLH 638
V VH F S D + P++ +Y +L++L+
Sbjct: 754 VGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 235/473 (49%), Gaps = 15/473 (3%)
Query: 59 FCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL 118
F + AL S+ L E +++HA +I G +++ Y +E + +F +
Sbjct: 9 FISRALSSSSN---LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 119 -PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFH 177
P +NV WN +IR + + P + ++ ++ KV PD TF +I +C
Sbjct: 66 SPAKNVYLWNSIIRAFS-----KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
+ +G ++ + +GF+ D FVG ALVD+Y++ GL+ AR+ F +P RDLV N +IS
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
Y+ + EEA +++ L+ D FT SS+L L G+ H L+ +S
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
V+V + L+ MY K TDAR VFDEM +R+ V++NT+I G E +++ + L
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
+ F PD LT+SS + CG+ ++ + +K F +V N LI Y+KCG++
Sbjct: 301 DQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
+A F E D V+W S+I Y G +A ++F+ M+ D +++L ++S
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 478 HCGLVT--KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ KGLH + + I D L+D+ + G + ++ ++ SM
Sbjct: 420 RLADLKFGKGLHSNGIKSG---ICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 57 HLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD 116
H+ + VS + A L GK LH++ IK G C LS+ N ++ +Y KC E+ D+ K+F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 117 ELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQF 176
+ + V+WN +I D + L V+ +M +VVPD TF + C
Sbjct: 468 SMGTGDTVTWNTVISACV---RFGDFATGLQVT--TQMRKSEVVPDMATFLVTLPMCASL 522
Query: 177 HNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI 236
+G ++HC ++ G++ + +G AL+++Y+KCG +EN+ R F + RD+V MI
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
Y + E+A F + G D F +++ C D G LA ++ +
Sbjct: 583 YAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG-LACFEKMKTHYK 641
Query: 297 SDVLVA--SALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLL 353
D ++ + ++++ ++++ I+ A M I+ + W +++ C GD ++
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVS 701
Query: 354 RDMLREGFSPDE 365
R ++ +PD+
Sbjct: 702 RRIIE--LNPDD 711
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTS 436
+S + E + HA+ + L + LI YS S+L FR ++ ++ W S
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNS 76
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I A++ +G +A E + K+ V PD+ +F V+ ACA GL + VY
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA-------GLFDAEMGDLVY 129
Query: 497 QIVPD----SDHY--TCLVDLLGRYGLIDEAFELLRSMPVE 531
+ + D SD + LVD+ R GL+ A ++ MPV
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 288/544 (52%), Gaps = 12/544 (2%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+Q+ A ++ H + N ++ ++ + + LF N S+N MIRG+
Sbjct: 54 RQIQAQML----LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
N+++++ +S ++RM + PD T+N + +C + IGVG +H KVG +
Sbjct: 110 WNDHEAA----LSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D + +L+ +YAKCG V AR+ F + RD V N MIS Y+ ++A +F +
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+G DE T S+L C L G+L + + + + S LI+MY K ++
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
AR VF++M+ ++ VAW +I G SE KL +M + G SPD T+S+ +S CG
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
A+ Q A +LS Q + VA L+ Y KCG + AL+ F + TW +
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 405
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I AYA G A++A +F++M V P ++F+GVLSAC H GLV +G YF+ M+S++
Sbjct: 406 MITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 462
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+VP +HYT ++DLL R G++DEA+E + P + + L A +G+C ++ + E A
Sbjct: 463 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKA 522
Query: 557 AEKLFIIEPEKSV-NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVH 615
L ++ K+ NY SN+ A + W + R ++ D+G K PGCSWIE+ ++
Sbjct: 523 MRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELM 582
Query: 616 SFVS 619
F++
Sbjct: 583 EFLA 586
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 190/408 (46%), Gaps = 20/408 (4%)
Query: 35 WSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSL 94
+ R++ S PD+ + + V + CA ++ G+ +H+ L K G + +
Sbjct: 120 YRRMKFSGLKPDKFTY---NFVFIACAKLEEIGV-------GRSVHSSLFKVGLERDVHI 169
Query: 95 QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRM 154
+ ++ +Y KC ++ A KLFDE+ R+ VSWN MI G + D+ + F++M
Sbjct: 170 NHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA-----MDLFRKM 224
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
E PD T ++G+C ++ G L + L F+G L+ +Y KCG +
Sbjct: 225 EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDL 284
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
++ARR F + +D V MI+ Y+ N EAF +F + G + D T S++LS C
Sbjct: 285 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
++ ++GK + + ++ VA+ L++MY K + +A VF+ M ++N WN
Sbjct: 345 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWN 404
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAIAVK 393
+I + G E L L M P ++T +S C +A + + + H ++
Sbjct: 405 AMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 461
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHA 440
+ ++I S+ G + A + R +PD + +++ A
Sbjct: 462 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 318/600 (53%), Gaps = 31/600 (5%)
Query: 73 LPEG----KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNI 128
+PEG KQ+HA+ ++ G + + N ++++Y K ++ + L GR++V+WN
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
++ + NE A + Y + M+LE V PD T + ++ +C + G +LH Y
Sbjct: 273 VLSSLC--QNEQLLEA---LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 189 TVKVG-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
+K G D + FVG ALVD+Y C V + RR F + R + + N MI+ Y+ N +E
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 248 AFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
A +F + G + T + ++ C + + H ++++ D D V + L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML--------- 357
+MY++ I A +F +M R++V WNT+I G + L LL M
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 358 --REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGN 415
R P+ +T+ + + C SA+ + + HA A+K + ++V ++L+ Y+KCG
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
+ + K F + +++TW +I AY HG ++A ++ M+ GV P+ V+F+ V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEV-ES 534
C+H G+V +GL F +M Y + P SDHY C+VDLLGR G I EA++L+ MP + ++
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687
Query: 535 DTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMI 594
+ +G+ ++H N+ + E AA+ L +EP + +Y ++NIY+S W R+ +
Sbjct: 688 GAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Query: 595 GDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVCL-------DTSCWL 647
++G K PGCSWIE ++VH FV+ D +HP++ ++ L+ L + DTSC L
Sbjct: 748 KEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVL 807
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 244/553 (44%), Gaps = 53/553 (9%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGF-CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRN 122
LK A + GKQ+HAH+ KFG+ +++ N ++++Y KC + K+FD + RN
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQF---HNI 179
VSWN +I + + + + F+ ML E V P T ++ +C +
Sbjct: 164 QVSWNSLISSLCSFEKWE-----MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
+G Q+H Y ++ G +L+ F+ LV +Y K G + +++ + RDLV N ++S
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ-AFDSD 298
N EA + ++G DEFT SS+L C LE GK H+ L+ + D +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
V SAL++MY + + R VFD M R + WN +I G E L L M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 359 E-GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
G + T++ + C + A + H VK V N+L+ YS+ G I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS-----------CGVVPDR 466
A++ F E+ DLVTW ++I Y F E A + KM + + P+
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 467 VSFLGVLSACAHCGLVTKG--LHYF----NLMT----------------------SVYQI 498
++ + +L +CA + KG +H + NL T V+
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 499 VPDSDHYTCLVDLL--GRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+P + T V ++ G +G EA +LLR M V+ FI ++ G+ +
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 557 AEKLFIIEPEKSV 569
++++P+ V
Sbjct: 638 LRIFYVMKPDYGV 650
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 217/477 (45%), Gaps = 66/477 (13%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLS-LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
L GK+LHA+ +K G S + + ++ +Y CK++ ++FD + R + WN MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G + NE+D A L + ++ + T G++ +CV+ +H + V
Sbjct: 377 AGYS--QNEHDKEALLLFIGMEES--AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF- 249
K G D D FV L+D+Y++ G ++ A R F + RDLV N MI+ Y + E+A
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 250 ---SMFNLLRM--DGAN-----GDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
M NL R GA+ + T ++L C L GK H+ ++ +DV
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
V SAL++MYAK + +R VFD++ +NV+ WN II+ G +G+G E + LLR M+ +
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAI-----AVKLSFQEFLSVANSLISAYSKCG 414
G P+E+T S + C ++ + E L+ + V+ S + V + L + G
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL----GRAG 668
Query: 415 NITSALKCFRLTEEP--DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGV 472
I A + + W+SL+ A H E +G
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE---------------------IGE 707
Query: 473 LSACAHCGLVTKGLHYFNLMTSVYQIVPD-SDHYTCLVDLLGRYGLIDEAFELLRSM 528
++A ++ Q+ P+ + HY L ++ GL D+A E+ R+M
Sbjct: 708 IAA-----------------QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 174/385 (45%), Gaps = 16/385 (4%)
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCF-VGCALVDLYAKCG 212
M++ + PD F L+ + ++ +G Q+H + K G+ +D V LV+LY KCG
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
+ F + R+ V N +IS E A F + + FT S+++
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 273 VCDTL---EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
C L E +GK H+ LR+ + + + + L+ MY K + ++ + R+
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
+V WNT++ E L+ LR+M+ EG PDE TISS + C + + + HA
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 390 IAVK-LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
A+K S E V ++L+ Y C + S + F + + W ++I Y+ + +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 449 KATEMFEKM-LSCGVVPDRVSFLGVLSACAHCGLVTK--GLHYFNLMTSVYQIVPDSDHY 505
+A +F M S G++ + + GV+ AC G ++ +H F + + D D +
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL-----DRDRF 441
Query: 506 --TCLVDLLGRYGLIDEAFELLRSM 528
L+D+ R G ID A + M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 10/257 (3%)
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD-VL 300
N L E + +++ + G D + F +LL L+ ++GK H+ + + + D V
Sbjct: 76 NLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT 134
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
VA+ L+N+Y K + VFD + RN V+WN++I ++ L+ R ML E
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194
Query: 361 FSPDELTISSTISLCG---YASAITETLQTHAIAV-KLSFQEFLSVANSLISAYSKCGNI 416
P T+ S ++ C + Q HA + K F + N+L++ Y K G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF--IINTLVAMYGKLGKL 252
Query: 417 TSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
S+ DLVTW +++ + + Q +A E +M+ GV PD + VL AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 477 AHCGLVTKG--LHYFNL 491
+H ++ G LH + L
Sbjct: 313 SHLEMLRTGKELHAYAL 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 33 HPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVL 92
H L VS + P+++ L L A + L +GK++HA+ IK +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLM--TILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 93 SLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFK 152
++ + ++ +Y KC ++ + K+FD++P +NV++WN++I N ++ + +
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA-----IDLLR 607
Query: 153 RMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC---FVGCALVDLYA 209
M+++ V P+ VTF + +C + G+++ Y +K + ++ C +VDL
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYAC-VVDLLG 665
Query: 210 KCGLVENARRAFCAVPCRDL 229
+ G ++ A + +P RD
Sbjct: 666 RAGRIKEAYQLMNMMP-RDF 684
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 291/534 (54%), Gaps = 12/534 (2%)
Query: 109 EDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNG 168
E+A K+FD++ NVV+W +MI ++ + +F M+L D T +
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA-----IRFFLDMVLSGFESDKFTLSS 274
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC---GLVENARRAFCAVP 225
+ +C + N+ +G QLH + ++ G D V C+LVD+YAKC G V++ R+ F +
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 226 CRDLVMCNVMISCYALNC-LPEEAFSMFNLLRMDG-ANGDEFTFSSLLSVCDTLEYYDIG 283
++ +I+ Y NC L EA ++F+ + G + FTFSS C L +G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
K ++ S+ VA+++I+M+ K++ + DA+ F+ + +N+V++NT + G
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
+ + KLL ++ T +S +S +I + Q H+ VKL V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
N+LIS YSKCG+I +A + F E ++++WTS+I +A HG A + E F +M+ GV
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
P+ V+++ +LSAC+H GLV++G +FN M ++I P +HY C+VDLL R GL+ +AFE
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 524 LLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRD 583
+ +MP + + F+G+C++H+N L + AA K+ ++P + Y +SNIYA
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGK 692
Query: 584 WCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
W + R+ + ++ K GCSWIEV +++H F D HP A ++Y L L
Sbjct: 693 WEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 230/506 (45%), Gaps = 27/506 (5%)
Query: 38 LRASVSVPD---QTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSL 94
LR +VS D + R D+V ++ LK + GK +HA LI+F L
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTF--SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 95 QNQILSVYLKCKEIEDADKLFDELP---GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++S+Y K + A+ +F+ + R+VVSW+ M+ E D+ + F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDA-----IKVF 154
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG-FDLDCFVGCALVDLYAK 210
L +VP+ + +I +C +GVG + +K G F+ D VGC+L+D++ K
Sbjct: 155 VEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 211 C-GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSS 269
ENA + F + ++V +MI+ P EA F + + G D+FT SS
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK---NENITDARGVFDEML 326
+ S C LE +GK HS +R D V +L++MYAK + ++ D R VFD M
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 327 IRNVVAWNTIIVG-CGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITET 384
+V++W +I G N +E + L +M+ +G P+ T SS CG S
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
Q A K SVANS+IS + K + A + F E +LV++ + + +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
E+A ++ ++ + +F +LS A+ G + KG + + V ++ +
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ---IHSQVVKLGLSCNQ 509
Query: 505 YTC--LVDLLGRYGLIDEAFELLRSM 528
C L+ + + G ID A + M
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFM 535
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 7/286 (2%)
Query: 57 HLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD 116
H ++A K + GKQ+ K G S+ N ++S+++K +EDA + F+
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 117 ELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQF 176
L +N+VS+N + G R+ + + L +R L TF L+
Sbjct: 433 SLSEKNLVSYNTFLDGTC-RNLNFEQAFKLLSEITERELGVSA----FTFASLLSGVANV 487
Query: 177 HNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI 236
+I G Q+H VK+G + V AL+ +Y+KCG ++ A R F + R+++ MI
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAF 295
+ +A + FN + +G +E T+ ++LS C + G + +S+
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGC 340
+ + ++++ + +TDA + M + +V+ W T + C
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/569 (31%), Positives = 300/569 (52%), Gaps = 17/569 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G QL + ++K G L + N +++Y + A ++FDE+ ++++SWN ++ G++
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS- 251
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+ + V F+ M+ E V D+V+F +I +C ++ + Q+H +K G++
Sbjct: 252 ---QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
VG L+ Y+KCG++E + F + R++V MIS ++A S+F +
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNM 363
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
R DG +E TF L++ E G H L ++ F S+ V ++ I +YAK E +
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
DA+ F+++ R +++WN +I G G E LK+ E P+E T S ++
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAI 482
Query: 376 GYASAIT--ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
+A I+ + + HA +KL V+++L+ Y+K GNI + K F + +
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV 542
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMT 493
WTS+I AY+ HG E +F KM+ V PD V+FL VL+AC G+V KG FN+M
Sbjct: 543 WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMI 602
Query: 494 SVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLA 553
VY + P +HY+C+VD+LGR G + EA EL+ +P L + +GSC+LH N+ +
Sbjct: 603 EVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMG 662
Query: 554 EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN- 612
AE ++PE S +Y M NIYA + +W RK + K +K G SWI+V +
Sbjct: 663 AKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDT 722
Query: 613 ----QVHSFVSRDKTHPKALEMYATLKML 637
+ F S DK+HPK+ E+Y ++++
Sbjct: 723 EGSLTMQGFSSGDKSHPKSDEIYRMVEII 751
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L +Q+H IK G+ +L + N ++S Y KC +E +F ++ RNVVSW MI
Sbjct: 292 LKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-- 349
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
N++D+ VS F M + V P+ VTF GLI + I G+++H +K
Sbjct: 350 ---SSNKDDA-----VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
GF + VG + + LYAK +E+A++AF + R+++ N MIS +A N EA MF
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDI--GKLAHSLILRQAFDSDVLVASALINMYA 310
L +E+TF S+L+ E + G+ H+ +L+ +S +V+SAL++MYA
Sbjct: 462 -LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYA 520
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K NI ++ VF+EM +N W +II ++GD V+ L M++E +PD +T S
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 371 TISLC 375
++ C
Sbjct: 581 VLTAC 585
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 225/479 (46%), Gaps = 40/479 (8%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L + A R L G Q+H GF + + N ++ +Y K ++A +F+ L +V
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSWN ++ G DN+ + +++ RM VV D T++ + CV +G+
Sbjct: 143 VSWNTILSGF--DDNQ------IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGL 194
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL-N 242
QL VK G + D VG + + +Y++ G ARR F + +D++ N ++S +
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 243 CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
EA +F + +G D +F+S+++ C + + H L +++ ++S + V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+ L++ Y+K + + VF +M RNVV+W T+I + + + + +M +G
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVY 369
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
P+E+T I+ I E L+ H + +K F SV NS I+ Y+K + A K
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA----- 477
F ++++W ++I +A +G + +A +MF + +P+ +F VL+A A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDI 488
Query: 478 --------HCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
H L+ GL+ +++S L+D+ + G IDE+ ++ M
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSS------------ALLDMYAKRGNIDESEKVFNEM 535
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 17/227 (7%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
NA+K + + + EG ++H IK GF S+ N +++Y K + +EDA K F+++ R
Sbjct: 380 NAVKCNEQ---IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE---KVVPDYVTFNGLIGSCVQFHN 178
++SWN MI G A +++ +M L + +P+ TF ++ + +
Sbjct: 437 EIISWNAMISGFAQNGFSHEA---------LKMFLSAAAETMPNEYTFGSVLNAIAFAED 487
Query: 179 IGV--GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI 236
I V G + H + +K+G + V AL+D+YAK G ++ + + F + ++ + +I
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSII 547
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG 283
S Y+ + E ++F+ + + D TF S+L+ C+ D G
Sbjct: 548 SAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 318/621 (51%), Gaps = 23/621 (3%)
Query: 33 HPWSRLRASVSVPDQ---------TLFRD---PDTVHLFCANALKVSAKRAFLPEGKQLH 80
+ W+ L S+S Q +FRD PD L ALK + + G+ +H
Sbjct: 26 YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL--PVALKACGELREVNYGEMIH 83
Query: 81 AHLIK-FGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNE 139
+ K L + + ++ +Y+KC + +A ++FDEL ++V+W+ M+ G E
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGF-----E 138
Query: 140 NDSSAPLCVSYFKRMLL-EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC 198
+ S V +F+RM++ V PD VT L+ +C + N +G +H + ++ GF D
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 199 FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
+ +L++ YAK + A F + +D++ + +I+CY N EA +FN + D
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
G + T +L C + G+ H L +R+ +++V V++AL++MY K + +A
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS-PDELTISSTISLCGY 377
VF + ++VV+W +I G G ++ ML E + PD + + + C
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
+ + H+ +K F + SL+ YS+CG++ +A K F D V WTSL
Sbjct: 379 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 438 IHAYAFHGQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
I Y HG+ KA E F M+ S V P+ V+FL +LSAC+H GL+ +GL F LM + Y
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 498
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
++ P+ +HY LVDLLGR G +D A E+ + MP LG +G+C++H N +AE
Sbjct: 499 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHS 616
A+KLF +E + Y MSN+Y + +W +VE R + +G K S IE+ +VH
Sbjct: 559 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHR 618
Query: 617 FVSRDKTHPKALEMYATLKML 637
FV+ D+ HP+ +Y LK L
Sbjct: 619 FVADDELHPEKEPVYGLLKEL 639
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
DAR +F EM R++ WNT++ EVL M R+ PD T+ + CG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 377 YASAITETLQTHAIAVK-LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
+ H K ++ L V +SLI Y KCG + AL+ F E+PD+VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 436 SLIHAYAFHGQAEKATEMFEKM-LSCGVVPDRVSFLGVLSACA 477
S++ + +G +A E F +M ++ V PDRV+ + ++SAC
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 279/543 (51%), Gaps = 6/543 (1%)
Query: 94 LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
LQN +L +Y +C+ +EDADKLFDE+ N VS MI A + + + V F
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA-----VGLFSG 174
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
ML P + L+ S V + G Q+H + ++ G + + +V++Y KCG
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV 273
+ A+R F + + V C ++ Y +A +F L +G D F FS +L
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAW 333
C +LE ++GK H+ + + +S+V V + L++ Y K + A F E+ N V+W
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSP-DELTISSTISLCGYASAITETLQTHAIAV 392
+ II G E +K + + + S + T +S C + Q HA A+
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 393 KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATE 452
K S ++LI+ YSKCG + A + F + PD+V WT+ I +A++G A +A
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
+FEKM+SCG+ P+ V+F+ VL+AC+H GLV +G H + M Y + P DHY C++D+
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534
Query: 513 GRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYA 572
R GL+DEA + +++MP E ++ + F+ C H N+ L E A E+L ++PE + Y
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYA 632
N+Y W + K++ ++ K CSWI+ ++H F+ DK HP+ E+Y
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE 654
Query: 633 TLK 635
LK
Sbjct: 655 KLK 657
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 182/376 (48%), Gaps = 8/376 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q+HAH+I+ G C S++ I+++Y+KC + A ++FD++ + V+ ++ G
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D+ + F ++ E V D F+ ++ +C + +G Q+H K+G +
Sbjct: 263 AGRARDA-----LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ VG LVD Y KC E+A RAF + + V + +IS Y EEA F L
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 256 RMDGANG-DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
R A+ + FT++S+ C L +IG H+ ++++ SALI MY+K
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ DA VF+ M ++VAW I G YG+ SE L+L M+ G P+ +T + ++
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 375 CGYASAITETLQ-THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLV 432
C +A + + + K + + + +I Y++ G + ALK + + EPD +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM 557
Query: 433 TWTSLIHAYAFHGQAE 448
+W + H E
Sbjct: 558 SWKCFLSGCWTHKNLE 573
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 8/280 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A L GKQ+HA + K G +S+ ++ Y+KC E A + F E+ N
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV-VPDYVTFNGLIGSCVQFHNIGVG 182
VSW+ +I G ++ V FK + + + + T+ + +C + +G
Sbjct: 352 VSWSAIISGYCQMSQFEEA-----VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIG 406
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
Q+H +K + AL+ +Y+KCG +++A F ++ D+V IS +A
Sbjct: 407 GQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYY 466
Query: 243 CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
EA +F + G + TF ++L+ C + GK +LR+ + +
Sbjct: 467 GNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH 526
Query: 303 -SALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGC 340
+I++YA++ + +A M + ++W + GC
Sbjct: 527 YDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%)
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
EAF + G + +++ L C L G+L H + + VL+ + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDEL 366
MY + ++ DA +FDEM N V+ T+I G + + L ML G P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
++ + A+ Q HA ++ S+ +++ Y KCG + A + F
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
V T L+ Y G+A A ++F +++ GV D F VL ACA
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 309/588 (52%), Gaps = 20/588 (3%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD C L+ L GK++H H++++G+ + + N ++++Y+KC +++ A
Sbjct: 194 PDVYTFPCV--LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLC---VSYFKRMLLEKVVPDYVTFNGL 169
LFD +P R+++SWN MI G EN +C + F M V PD +T +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYF----ENG----MCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL 229
I +C + +G +H Y + GF +D V +L +Y G A + F + +D+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL 289
V MIS Y N LP++A + ++ D DE T +++LS C TL D G H L
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
++ S V+VA+ LINMY+K + I A +F + +NV++W +II G E
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAIT--ETLQTHAIAVKLSFQEFLSVANSLI 407
L LR M + P+ +T+++ ++ C A+ + + H + + +FL N+L+
Sbjct: 484 LIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL--PNALL 540
Query: 408 SAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRV 467
Y +CG + +A F +++ D+ +W L+ Y+ GQ E+F++M+ V PD +
Sbjct: 541 DMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 468 SFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRS 527
+F+ +L C+ +V +GL YF+ M Y + P+ HY C+VDLLGR G + EA + ++
Sbjct: 600 TFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 658
Query: 528 MPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDV 587
MPV + GA + +C++H I L E +A+ +F ++ + Y + N+YA W +V
Sbjct: 659 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 718
Query: 588 ESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLK 635
R+M+ + G GCSW+EV +VH+F+S DK HP+ E+ L+
Sbjct: 719 AKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 232/447 (51%), Gaps = 14/447 (3%)
Query: 92 LSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
+ L N L+++++ + DA +F ++ RN+ SWN+++ G A + +++ +C+ Y
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA---MCL-YH 184
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
+ + + V PD TF ++ +C ++ G ++H + V+ G++LD V AL+ +Y KC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G V++AR F +P RD++ N MIS Y N + E +F +R + D T +S++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV 331
S C+ L +G+ H+ ++ F D+ V ++L MY + +A +F M +++V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
+W T+I G + + R M ++ PDE+T+++ +S C + ++ H +A
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
+K ++ VAN+LI+ YSKC I AL F ++++WTS+I + + +A
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHCG--LVTKGLHYFNLMTSVY--QIVPDSDHYTC 507
+F + + + P+ ++ L+ACA G + K +H L T V +P++
Sbjct: 485 -IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA----- 538
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVES 534
L+D+ R G ++ A+ S +V S
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQKKDVTS 565
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 1/236 (0%)
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
EEA + N ++ DE F +L+ +C+ + G +S+ L V + +A
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPD 364
+ M+ + N+ DA VF +M RN+ +WN ++ G G E + L ML G PD
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
T + CG + + H V+ ++ + V N+LI+ Y KCG++ SA F
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
D+++W ++I Y +G + E+F M V PD ++ V+SAC G
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
Query: 44 VPDQTL----FRDPDTV---HLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQN 96
+PD+ + D D+V + A L A L G +LH IK + + N
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 97 QILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL 156
++++Y KCK I+ A +F +P +NV+SW +I G+ R N A + F R +
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL--RLNNRCFEALI----FLRQMK 491
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN 216
+ P+ +T + +C + + G ++H + ++ G LD F+ AL+D+Y +CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDT 276
A F + +D+ N++++ Y+ +F+ + DE TF SLL C
Sbjct: 552 AWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 277 LEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNT 335
+ G + S + ++ + ++++ + + +A +M + + W
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 336 IIVGC 340
++ C
Sbjct: 671 LLNAC 675
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
C N G E +KLL M + DE + + LC + A E + ++IA+
Sbjct: 70 CAN-GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ + N+ ++ + + GN+ A F E +L +W L+ YA G ++A ++ +ML
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 460 C-GVVPDRVSFLGVLSACAHCGLVTKGLH-YFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
GV PD +F VL C + +G + +++ Y++ D D L+ + + G
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL--DIDVVNALITMYVKCGD 246
Query: 518 IDEAFELLRSMP 529
+ A L MP
Sbjct: 247 VKSARLLFDRMP 258
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 303/560 (54%), Gaps = 7/560 (1%)
Query: 76 GKQLHAHLIKFG-FCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
GK++HA ++K L + N ++++Y +C ++ A+++ ++ +VV+WN +I+G
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
++ + +F M+ D V+ +I + + N+ G++LH Y +K G+
Sbjct: 363 QNLMYKEA-----LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
D + VG L+D+Y+KC L RAF + +DL+ +I+ YA N EA +F
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+ DE S+L L+ I K H ILR+ D ++ + L+++Y K N
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRN 536
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ A VF+ + ++VV+W ++I G+ SE ++L R M+ G S D + + +S
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
SA+ + + H ++ F S+A +++ Y+ CG++ SA F E L+ +
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS 494
TS+I+AY HG + A E+F+KM V PD +SFL +L AC+H GL+ +G + +M
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
Y++ P +HY CLVD+LGR + EAFE ++ M E ++ A + +C+ H+ + E
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 776
Query: 555 WAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
AA++L +EP+ N +SN++A Q W DVE R + G K PGCSWIE+ +V
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 836
Query: 615 HSFVSRDKTHPKALEMYATL 634
H F +RDK+HP++ E+Y L
Sbjct: 837 HKFTARDKSHPESKEIYEKL 856
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 235/500 (47%), Gaps = 37/500 (7%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIK-FGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
A L++ KR + +G+QLH+ + K F + L +++ +Y KC ++DA+K+FDE+P
Sbjct: 84 AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP 143
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
R +WN MI G + E S+ L + M +E V +F L+ +C + +I
Sbjct: 144 DRTAFAWNTMI-GAYVSNGEPASALAL----YWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR-DLVMCNVMISC 238
G +LH VK+G+ F+ ALV +YAK + ARR F + D V+ N ++S
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDS 297
Y+ + E +F + M G + +T S L+ CD Y +GK H+ +L+ + S
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
++ V +ALI MY + + A + +M +VV WN++I G E L+ DM+
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
G DE++++S I+ G S + ++ HA +K + L V N+LI YSKC
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
+ F + DL++WT++I YA + +A E+F + + D + +L A +
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 478 -----------HCGLVTKGL----------------HYFNLMTSVYQIVPDSD--HYTCL 508
HC ++ KGL T V++ + D +T +
Sbjct: 499 VLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 509 VDLLGRYGLIDEAFELLRSM 528
+ G EA EL R M
Sbjct: 559 ISSSALNGNESEAVELFRRM 578
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 168/341 (49%), Gaps = 5/341 (1%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV--GFDLDCFVGCALVDLY 208
F+R+ + + F ++ C + + G QLH K F+LD F+ LV +Y
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMY 126
Query: 209 AKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
KCG +++A + F +P R N MI Y N P A +++ +R++G +F
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
+LL C L G HSL+++ + S + +AL++MYAKN++++ AR +FD +
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 329 -NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
+ V WN+I+ G E L+L R+M G +P+ TI S ++ C S +
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 388 HAIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
HA +K S L V N+LI+ Y++CG + A + R D+VTW SLI Y +
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
++A E F M++ G D VS +++A + G+
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVKL--SFQ-EFLSVANSLISAYSKCGN 415
E SP E + + LCG A+++ Q H+ K SF+ +FL A L+ Y KCG+
Sbjct: 75 ENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL--AGKLVFMYGKCGS 131
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
+ A K F + W ++I AY +G+ A ++ M GV SF +L A
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 476 CAHCGLVTKGLHYFNLMTSV 495
CA + G +L+ +
Sbjct: 192 CAKLRDIRSGSELHSLLVKL 211
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 287/551 (52%), Gaps = 11/551 (1%)
Query: 65 KVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVV 124
K + + + G +H +++ F +QN +L++Y+ ++E A +FD + R+V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
SWN MI G ND+ + F M+ E V D+ T ++ C ++ +G
Sbjct: 185 SWNTMISGYYRNGYMNDA-----LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
+H + V ALV++Y KCG ++ AR F + RD++ MI+ Y +
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVC-DTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
E A + L++ +G + T +SL+SVC D L+ D GK H +RQ SD+++ +
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND-GKCLHGWAVRQQVYSDIIIET 358
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+LI+MYAK + + VF + W+ II GC S+ L L + M RE P
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
+ T++S + + + + + H K F L A L+ YSKCG + SA K F
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 424 RLTEEP----DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
+E D+V W +LI Y HG A ++F +M+ GV P+ ++F L+AC+H
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGA 539
GLV +GL F M Y+ + S+HYTC+VDLLGR G +DEA+ L+ ++P E S GA
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGA 598
Query: 540 FIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD 599
+ +C H N+ L E AA KLF +EPE + NY ++NIYA+ W D+E R M+ + G
Sbjct: 599 LLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Query: 600 AKVPGCSWIEV 610
K PG S IE+
Sbjct: 659 RKKPGHSTIEI 669
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 234/485 (48%), Gaps = 18/485 (3%)
Query: 73 LPEGKQLHAHLIKFGFC--HVLSLQNQILSV-YLKCKEIEDADKLFDELPGRNVVSWNIM 129
+ + K LH H+I G H+LS LSV Y C I A KLF+E+P +++S+NI+
Sbjct: 31 ISKTKALHCHVITGGRVSGHILS----TLSVTYALCGHITYARKLFEEMPQSSLLSYNIV 86
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLE--KVVPDYVTFNGLIGSCVQFHNIGVGIQLHC 187
IR +D+ +S F RM+ E K VPD T+ + + + ++ +G+ +H
Sbjct: 87 IRMYVREGLYHDA-----ISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 188 YTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
++ F D +V AL+ +Y G VE AR F + RD++ N MIS Y N +
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
A MF+ + + + D T S+L VC L+ ++G+ H L+ + + V +AL+N
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 308 MYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
MY K + +AR VFD M R+V+ W +I G GD L+L R M EG P+ +T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE 427
I+S +S+CG A + + H AV+ + + SLIS Y+KC + + F
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+ W+++I + A +F++M V P+ + +L A A + + ++
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL---GAFIGSC 544
+T + D T LV + + G ++ A ++ + + +S + GA I
Sbjct: 442 IHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 545 KLHAN 549
+H +
Sbjct: 501 GMHGD 505
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
C +ALKV+ +GK LH ++ + ++ ++S+Y KCK ++ ++F
Sbjct: 329 CGDALKVN-------DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
+ W+ +I G NE S A + FKRM E V P+ T N L+ + ++
Sbjct: 382 KYHTGPWSAIIAGCV--QNELVSDA---LGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV----PCRDLVMCNVM 235
+ +HCY K GF LV +Y+KCG +E+A + F + +D+V+ +
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
IS Y ++ A +F + G +E TF+S L+ C
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 20/172 (11%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL----P 119
L A A L + +H +L K GF L ++ VY KC +E A K+F+ +
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
++VV W +I G + +++ + F M+ V P+ +TF + +C +
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNA-----LQVFMEMVRSGVTPNEITFTSALNACSHSGLV 541
Query: 180 GVGIQL------HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
G+ L H T+ C +VDL + G ++ A +P
Sbjct: 542 EEGLTLFRFMLEHYKTLARSNHYTC-----IVDLLGRAGRLDEAYNLITTIP 588
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 307/570 (53%), Gaps = 16/570 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG-VA 134
G+Q+H +IK G+ + + + ++ +Y KC+ +EDA + F E+ N VSWN +I G V
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 135 GRDNENDSSAPLCVSYFKRMLLE---KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
RD + +++ L+E V D TF L+ + Q+H +K
Sbjct: 180 VRD--------IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK 231
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP-CRDLVMCNVMISCYALNCLPEEAFS 250
+G + + A++ YA CG V +A+R F + +DL+ N MI+ ++ + L E AF
Sbjct: 232 LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFE 291
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F ++ D +T++ LLS C E+ GK H +++++ + +ALI+MY
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYI 351
Query: 311 K--NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
+ + DA +F+ + +++++WN+II G G + +K + D+
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 369 SSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTE 427
S+ + C + + Q HA+A K F V +SLI YSKCG I SA KCF+ ++
Sbjct: 412 SALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISS 471
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+ V W ++I YA HG + + ++F +M + V D V+F +L+AC+H GL+ +GL
Sbjct: 472 KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLE 531
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLH 547
NLM VY+I P +HY VDLLGR GL+++A EL+ SMP+ + L F+G C+
Sbjct: 532 LLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRAC 591
Query: 548 ANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
I +A A L IEPE Y ++S++Y+ + W + S +KM+ ++G KVPG SW
Sbjct: 592 GEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSW 651
Query: 608 IEVANQVHSFVSRDKTHPKALEMYATLKML 637
IE+ NQV +F + D+++P ++Y +K L
Sbjct: 652 IEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 212/446 (47%), Gaps = 10/446 (2%)
Query: 80 HAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNE 139
H + IK G + + N+IL Y+K + A+ LFDE+P R+ VSWN MI G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 140 NDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCF 199
D+ C+ F M D +F+ L+ +G Q+H +K G++ + +
Sbjct: 83 EDA---WCL--FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 200 VGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG 259
VG +LVD+YAKC VE+A AF + + V N +I+ + + AF + L+ M
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 260 A-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
A D TF+ LL++ D + ++ K H+ +L+ ++ + +A+I+ YA +++DA
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 319 RGVFDEM-LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
+ VFD + +++++WN++I G + +L M R D T + +S C
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG 317
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK--CGNITSALKCFRLTEEPDLVTWT 435
H + +K ++ S N+LIS Y + G + AL F + DL++W
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWN 377
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
S+I +A G +E A + F + S + D +F +L +C+ + G L T
Sbjct: 378 SIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS 437
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEA 521
V + + L+ + + G+I+ A
Sbjct: 438 -GFVSNEFVISSLIVMYSKCGIIESA 462
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 195/406 (48%), Gaps = 37/406 (9%)
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP 245
HCY +K G D +V ++D Y K G + A F +P RD V N MIS Y
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
E+A+ +F ++ G++ D ++FS LL +++ +D+G+ H L+++ ++ +V V S+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGFSPD 364
++MYAK E + DA F E+ N V+WN +I G D LL M ++ + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
T + ++L Q HA +KL Q +++ N++IS+Y+ CG+++ A + F
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 425 -LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA------ 477
L DL++W S+I ++ H E A E+F +M V D ++ G+LSAC+
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 478 -----HCGLVTKGLHYF----NLMTSVYQIVP-----------------DSDHYTCLVDL 511
H ++ KGL N + S+Y P D + ++
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 512 LGRYGLIDEA---FELLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
+ GL ++A F LRS ++V+ A + SC A + L +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
L H ++ SD+ V++ +++ Y K + A +FDEM R+ V+WNT+I G + G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
+ L M R G D + S + Q H + +K ++ + V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAY 441
SL+ Y+KC + A + F+ EP+ V+W +LI +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-N 122
L+ + A L G+Q+HA K GF + + ++ +Y KC IE A K F ++ + +
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
V+WN MI G A + + F +M + V D+VTF ++ +C I G
Sbjct: 475 TVAWNAMILGYA-----QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 529
Query: 183 IQLHCY---TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR--DLVMCNVMIS 237
++L K+ ++ + A VDL + GLV A+ ++P +V+ +
Sbjct: 530 LELLNLMEPVYKIQPRMEHY--AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGV 587
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
C A + +LL ++ D FT+ SL + L+ ++
Sbjct: 588 CRACGEIEMATQVANHLLEIEPE--DHFTYVSLSHMYSDLKKWE 629
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 263/493 (53%), Gaps = 8/493 (1%)
Query: 159 VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR 218
+ D +N L+ C F + G +H + ++ F D +G L+++YAKCG +E AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
+ F +P RD V +IS Y+ + P +A FN + G + +EFT SS++
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIV 338
G H ++ FDS+V V SAL+++Y + + DA+ VFD + RN V+WN +I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQE 398
G + L+L + MLR+GF P + +S C + + HA +K +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 399 FLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
N+L+ Y+K G+I A K F + D+V+W SL+ AYA HG ++A FE+M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLI 518
G+ P+ +SFL VL+AC+H GL+ +G HY+ LM IVP++ HY +VDLLGR G +
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDL 414
Query: 519 DEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIY 578
+ A + MP+E + A + +C++H N L +AAE +F ++P+ + + NIY
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 579 ASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHP-------KALEMY 631
AS W D RK + + G K P CSW+E+ N +H FV+ D+ HP K E+
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 632 ATLKMLHVCLDTS 644
A +K L DTS
Sbjct: 535 AKIKELGYVPDTS 547
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 197/378 (52%), Gaps = 6/378 (1%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
L +G+ +HAH+++ F H + + N +L++Y KC +E+A K+F+++P R+ V+W +I
Sbjct: 75 LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLIS 134
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
G + D D+ + +F +ML P+ T + +I + G QLH + VK
Sbjct: 135 GYSQHDRPCDA-----LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
GFD + VG AL+DLY + GL+++A+ F A+ R+ V N +I+ +A E+A +
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
F + DG F+++SL C + + + GK H+ +++ + L++MYAK
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
+ +I DAR +FD + R+VV+WN+++ +G G E + +M R G P+E++ S
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPD 430
++ C ++ + E + + K +++ + G++ AL+ + EP
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT 429
Query: 431 LVTWTSLIHAYAFHGQAE 448
W +L++A H E
Sbjct: 430 AAIWKALLNACRMHKNTE 447
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 47 QTLFRDP-DTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKC 105
Q + RD H A+ + FL +GK +HA++IK G V N +L +Y K
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 106 KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
I DA K+FD L R+VVSWN ++ A ++ V +F+ M + P+ ++
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA-----VWWFEEMRRVGIRPNEIS 365
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
F ++ +C + G + K G + + +VDL + G + A R +P
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 305/576 (52%), Gaps = 11/576 (1%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
+K A + L EGK++HA +IK GF + + N ++S+Y+K DA+K+F+E+P R++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSWN MI G D + L + FK ML PD + +G+C ++ +G
Sbjct: 197 VSWNSMISGYLAL---GDGFSSLML--FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 184 QLHCYTVKVGFDL-DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
++HC+ V+ + D V +++D+Y+K G V A R F + R++V NVMI CYA N
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 243 CLPEEAFSMFNLL-RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
+AF F + +G D T +LL LE G+ H +R+ F +++
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVL 367
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
+ALI+MY + + A +FD M +NV++WN+II G L+L +++
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD TI+S + + +++E + HA VK + + NSL+ Y+ CG++ A K
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL 481
CF D+V+W S+I AYA HG + +F +M++ V P++ +F +L+AC+ G+
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 482 VTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI 541
V +G YF M Y I P +HY C++DL+GR G A L MP + G+ +
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 542 GSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAK 601
+ + H +I +AE+AAE++F +E + + Y + N+YA W DV + ++ KG ++
Sbjct: 608 NASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISR 667
Query: 602 VPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
S +E + H F + D++H ++Y L ++
Sbjct: 668 TSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVV 703
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 19/395 (4%)
Query: 97 QILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPL---CVSYFKR 153
+ L + + +EDA +LFDE+ + WN+MI+G +S L V ++ R
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGF--------TSCGLYIEAVQFYSR 120
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
M+ V D T+ +I S ++ G ++H +K+GF D +V +L+ LY K G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV 273
+A + F +P RD+V N MIS Y + +F + G D F+ S L
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 274 CDTLEYYDIGKLAHSLILRQAFDS-DVLVASALINMYAKNENITDARGVFDEMLIRNVVA 332
C + +GK H +R ++ DV+V +++++MY+K ++ A +F+ M+ RN+VA
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 333 WNTIIVGC-GNYGDGSEVLKLLRDMLRE-GFSPDELTISSTISLCGYASAITETLQTHAI 390
WN +++GC G ++ + M + G PD +T +I+L ASAI E H
Sbjct: 301 WN-VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT---SINLLP-ASAILEGRTIHGY 355
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
A++ F + + +LI Y +CG + SA F E ++++W S+I AY +G+ A
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 451 TEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
E+F+++ +VPD + +L A A +++G
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 174/351 (49%), Gaps = 12/351 (3%)
Query: 208 YAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
+A L+E+A + F + D + NVMI + L EA ++ + G D FT+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
++ + + GK H+++++ F SDV V ++LI++Y K DA VF+EM
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG--YASAITETL 385
R++V+WN++I G GDG L L ++ML+ GF PD + S + C Y+ + + +
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHG 445
HA+ ++ + + V S++ YSK G ++ A + F + ++V W +I YA +G
Sbjct: 254 HCHAVRSRIETGDVM-VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 446 QAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
+ A F+KM G+ PD ++ + +L A A L + +H + + +P
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI--LEGRTIHGYAMRRG---FLPHMVL 367
Query: 505 YTCLVDLLGRYGLIDEA---FELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
T L+D+ G G + A F+ + V + + A++ + K ++ + L
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 46 DQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKC 105
D +L D T+ A+ L A+ L EG+++HA+++K + + N ++ +Y C
Sbjct: 424 DSSLVPDSTTI----ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC 479
Query: 106 KEIEDADKLFDELPGRNVVSWNIMIRGVA----GRDNENDSSAPLCVSYFKRMLLEKVVP 161
++EDA K F+ + ++VVSWN +I A GR + V F M+ +V P
Sbjct: 480 GDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGR---------ISVWLFSEMIASRVNP 530
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV---GCALVDLYAKCGLVENAR 218
+ TF L+ +C + G + + ++K + +D + GC ++DL + G A+
Sbjct: 531 NKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGC-MLDLIGRTGNFSAAK 588
Query: 219 RAFCAVP 225
R +P
Sbjct: 589 RFLEEMP 595
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 294/579 (50%), Gaps = 13/579 (2%)
Query: 63 ALKVSAKRAFLPE--GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A +SA F + G+ +H + G L L + I+ +Y K +EDA K+FD +P
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVP-DYVTFNGLIGSCVQFHNI 179
++ + WN MI G R NE + + F+ ++ E D T ++ + + +
Sbjct: 183 KDTILWNTMISGY--RKNEMYVES---IQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
+G+Q+H K G +V + LY+KCG ++ F D+V N MI Y
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEY-YDIGKLAHSLILRQAFDSD 298
N E + S+F L + GA T SL+ V L Y I H L+ F S
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAI----HGYCLKSNFLSH 353
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
V++AL +Y+K I AR +FDE +++ +WN +I G G + + L R+M +
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
FSP+ +TI+ +S C A++ H + F+ + V+ +LI Y+KCG+I
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 419 ALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH 478
A + F L + + VTW ++I Y HGQ ++A +F +ML+ G+ P V+FL VL AC+H
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 479 CGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLG 538
GLV +G FN M Y P HY C+VD+LGR G + A + + +M +E S
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE 593
Query: 539 AFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKG 598
+G+C++H + LA +EKLF ++P+ + +SNI+++ R++ + R+ +
Sbjct: 594 TLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRK 653
Query: 599 DAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
AK PG + IE+ H F S D++HP+ E+Y L+ L
Sbjct: 654 LAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 213/475 (44%), Gaps = 14/475 (2%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
Q HA +I GF + +SL ++ I A +F + +V +N+++RG +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV-- 95
Query: 138 NENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLD 197
NE+ S+ ++ ++ + P+ T+ I + F + G +H V G D +
Sbjct: 96 NESPHSSLSVFAHLRKS--TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 198 CFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLR 256
+G +V +Y K VE+AR+ F +P +D ++ N MIS Y N + E+ +F +L+
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
D T +L L+ +G HSL + S V + I++Y+K I
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
+F E ++VA+N +I G + G+ L L ++++ G T+ S + + G
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
+ I H +K +F SV+ +L + YSK I SA K F + E L +W +
Sbjct: 334 HLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I Y +G E A +F +M P+ V+ +LSACA G ++ G +L+ S
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 497 QIVPDSDHY--TCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+S Y T L+ + + G I EA L M + E T I LH
Sbjct: 451 F---ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQ 501
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 309/585 (52%), Gaps = 11/585 (1%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
D T L A A+KV + L G+Q+H +K G +L++ N ++++Y K ++ A
Sbjct: 314 DQVTFILMLATAVKVDS----LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+FD + R+++SWN +I G+A E ++ V F ++L + PD T ++
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEA-----VCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 172 SCVQF-HNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+ + + Q+H + +K+ D FV AL+D Y++ ++ A F DLV
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLV 483
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
N M++ Y + + +F L+ G D+FT +++ C L + GK H+
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
++ +D D+ V+S +++MY K +++ A+ FD + + + VAW T+I GC G+
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+ M G PDE TI++ +A+ + Q HA A+KL+ V SL+ Y
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
+KCG+I A F+ E ++ W +++ A HG+ ++ ++F++M S G+ PD+V+F+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
GVLSAC+H GLV++ + M Y I P+ +HY+CL D LGR GL+ +A L+ SM +
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 531 EVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESA 590
E + + +C++ + + A KL +EP S Y +SN+YA+ W +++ A
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 591 RKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLK 635
R M+ K PG SWIEV N++H FV D+++ + +Y +K
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 198/383 (51%), Gaps = 7/383 (1%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
F M+ V D VTF ++ + V+ ++ +G Q+HC +K+G DL V +L+++Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
AR F + RDL+ N +I+ A N L EA +F L G D++T +S+
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 271 LSVCDTL-EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
L +L E + K H ++ SD V++ALI+ Y++N + +A +F+ +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-D 481
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
+VAWN ++ G DG + LKL M ++G D+ T+++ CG+ AI + Q HA
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
A+K + L V++ ++ Y KCG++++A F PD V WT++I +G+ E+
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY--TC 507
A +F +M GV+PD + + A + + +G + + ++ +D + T
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHANALKLNCTNDPFVGTS 658
Query: 508 LVDLLGRYGLIDEAFELLRSMPV 530
LVD+ + G ID+A+ L + + +
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEM 681
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 201/455 (44%), Gaps = 50/455 (10%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
GK HA ++ F L N ++S+Y KC + A ++FD++P R++VSWN ++ A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 136 RDN---ENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
EN A L F+ + + V +T + ++ C+ + H Y K+
Sbjct: 118 SSECVVENIQQAFLL---FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
G D D FV ALV++Y K G V+ + F +P RD+V+ N+M+ Y EEA +
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
+ G N +E T L + DSD + + +A
Sbjct: 235 SAFHSSGLNPNEITLRLLARISGD-------------------DSD----AGQVKSFA-- 269
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNY---GDGSEVLKLLRDMLREGFSPDELTIS 369
N DA V E++ RN G Y G S +LK DM+ D++T
Sbjct: 270 -NGNDASSV-SEIIFRN--------KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFI 319
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
++ ++ Q H +A+KL L+V+NSLI+ Y K A F E
Sbjct: 320 LMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER 379
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC--GL-VTKGL 486
DL++W S+I A +G +A +F ++L CG+ PD+ + VL A + GL ++K +
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
H + + V DS T L+D R + EA
Sbjct: 440 HVHAIKINN---VSDSFVSTALIDAYSRNRCMKEA 471
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
+GK H+ IL + + + + LI+MY+K ++T AR VFD+M R++V+WN+I+
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA-- 114
Query: 342 NYGDGSE--------VLKLLRDMLREGFSPDELTISSTISLC---GYASAITETLQTHAI 390
Y SE L R + ++ +T+S + LC GY A +E+ +A
Sbjct: 115 -YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA-SESFHGYAC 172
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
+ L EF VA +L++ Y K G + F D+V W ++ AY G E+A
Sbjct: 173 KIGLDGDEF--VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 451 TEMFEKMLSCGVVPDRVSF 469
++ S G+ P+ ++
Sbjct: 231 IDLSSAFHSSGLNPNEITL 249
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 302/586 (51%), Gaps = 15/586 (2%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A AL +R L G+ LH ++ G + L N ++ +Y KC +++ A LFD
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV-VPDYVTFNGLIGSCVQFHN- 178
R+ VSWN +I G +A ++ +M + + + Y + L C+ +
Sbjct: 212 RDQVSWNSLISGYV-----RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 179 -IGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
I G+ +HCYT K+G + D V AL+D+YAK G ++ A + F +P +++V N MIS
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS 326
Query: 238 CY-----ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
+ + EAF +F ++ G TFS +L C + + G+ H+LI +
Sbjct: 327 GFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK 386
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE-VLK 351
F SD + SALI +YA + D F +++ +W ++I C + E
Sbjct: 387 NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI-DCHVQNEQLESAFD 445
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
L R + P+E T+S +S C +A++ Q A+K F SV S IS Y+
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
K GN+ A + F + PD+ T++++I + A HG A +A +FE M + G+ P++ +FLG
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
VL AC H GLVT+GL YF M + Y+I P+ H+TCLVDLLGR G + +A L+ S +
Sbjct: 566 VLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ 625
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESAR 591
T A + SC+++ + + + AE+L +EPE S +Y + NIY E R
Sbjct: 626 DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVR 685
Query: 592 KMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
+++ D+G K P SWI + NQ HSF D +HP + +Y L+ +
Sbjct: 686 ELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 239/544 (43%), Gaps = 48/544 (8%)
Query: 37 RLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQN 96
R +S+ P T LF + +AK + GK H H+IK L L N
Sbjct: 32 RFLSSLCQPKNTALDSEGYKILF-----QTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLN 86
Query: 97 QILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL 156
+L++Y KC+E+ A +LFD +P RN++S+N +I G + + F
Sbjct: 87 NLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQA-----MELFLEARE 141
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN 216
+ D T+ G +G C + ++ +G LH V G F+ L+D+Y+KCG ++
Sbjct: 142 ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ 201
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC-- 274
A F RD V N +IS Y EE ++ + DG N + S+L C
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
Query: 275 -DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAW 333
+ + G H + + D++V +AL++MYAKN ++ +A +F M +NVV +
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTY 321
Query: 334 NTIIVGCGNYGD-----GSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
N +I G + SE KL DM R G P T S + C A + Q H
Sbjct: 322 NAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH 381
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
A+ K +FQ + ++LI Y+ G+ ++CF T + D+ +WTS+I + + Q E
Sbjct: 382 ALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLE 441
Query: 449 KATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH------------YFNLMTSVY 496
A ++F ++ S + P+ + ++SACA ++ G + ++ TS
Sbjct: 442 SAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSI 501
Query: 497 QIV------------------PDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLG 538
+ PD Y+ ++ L ++G +EA + SM
Sbjct: 502 SMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQ 561
Query: 539 AFIG 542
AF+G
Sbjct: 562 AFLG 565
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 284/550 (51%), Gaps = 3/550 (0%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q HA ++K + + ++ +Y K +ED K+F +P RN +W+ M+ G A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
R + A + F R E DYV F ++ S +G+G Q+HC T+K G
Sbjct: 197 RGRVEE--AIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLL 253
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ ALV +Y+KC + A + F + R+ + + M++ Y+ N EA +F+ +
Sbjct: 254 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
G E+T +L+ C + Y + GK HS +L+ F+ + +AL++MYAK +
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
DAR FD + R+V W ++I G D E L L R M G P++ T++S + C
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
+ + Q H +K F + + ++L + YSKCG++ FR T D+V+W
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
++I + +GQ ++A E+FE+ML+ G+ PD V+F+ ++SAC+H G V +G YFN+M+
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEW 555
+ P DHY C+VDLL R G + EA E + S ++ + +CK H L +
Sbjct: 554 IGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVY 613
Query: 556 AAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVH 615
A EKL + +S Y +S IY + DVE K + G +K GCSWIE+ NQ H
Sbjct: 614 AGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYH 673
Query: 616 SFVSRDKTHP 625
FV D HP
Sbjct: 674 VFVVGDTMHP 683
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 239/513 (46%), Gaps = 38/513 (7%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+P T L L +++ L G+ +H +I+ G + N +++ Y KC ++ A
Sbjct: 11 NPHTSTLL--KKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+F+ + ++VVSWN +I G + N SS+ + F+ M + ++P+ T G+
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYS--QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVM 231
+ + VG Q H VK+ D +V +LV +Y K GLVE+ + F +P R+
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 232 CNVMISCYALNCLPEEAFSMFNLL---RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+ M+S YA EEA +FNL + +G++ D + F+++LS Y +G+ H
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHC 245
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
+ ++ V +++AL+ MY+K E++ +A +FD RN + W+ ++ G G+ E
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLIS 408
+KL M G P E TI ++ C + E Q H+ +KL F+ L +L+
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 409 AYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
Y+K G + A K F +E D+ WTSLI Y + E+A ++ +M + G++P+ +
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 469 FLGVLSACAHCGLVTKG--------LHYFNLMTS--------------------VYQIVP 500
VL AC+ + G H F L V++ P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 501 DSD--HYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+ D + ++ L G DEA EL M E
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 138/276 (50%), Gaps = 9/276 (3%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
+L EGKQLH+ L+K GF L ++ +Y K + DA K FD L R+V W +I
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 132 G-VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G V DNE + ++RM ++P+ T ++ +C + +G Q+H +T+
Sbjct: 397 GYVQNSDNEE------ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K GF L+ +G AL +Y+KCG +E+ F P +D+V N MIS + N +EA
Sbjct: 451 KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ-AFDSDVLVASALINMY 309
+F + +G D+ TF +++S C + + G +++ Q D V + ++++
Sbjct: 511 LFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLL 570
Query: 310 AKNENITDARGVFDEMLI-RNVVAWNTIIVGCGNYG 344
++ + +A+ + I + W ++ C N+G
Sbjct: 571 SRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 35 WSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSL 94
+ R++ + +P+ DP A+ LK + A L GKQ+H H IK GF + +
Sbjct: 411 YRRMKTAGIIPN-----DPTM-----ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPI 460
Query: 95 QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRM 154
+ + ++Y KC +ED + +F P ++VVSWN MI G++ + + D + L F+ M
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS-HNGQGDEALEL----FEEM 515
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVG-IQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
L E + PD VTF +I +C + G + + ++G D +VDL ++ G
Sbjct: 516 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 214 VENARR 219
++ A+
Sbjct: 576 LKEAKE 581
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 312/603 (51%), Gaps = 43/603 (7%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIED---ADKLFDELPGRNVVSWNIMIRGVAG 135
+HA +IK G + ++++ + E A +F + N++ WN M RG A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA- 110
Query: 136 RDNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
SS P+ + + M+ ++P+ TF ++ SC + G Q+H + +K+G
Sbjct: 111 -----LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 195 DLDCFVGCALVDLY-------------------------------AKCGLVENARRAFCA 223
DLD +V +L+ +Y A G +ENA++ F
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 224 VPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG 283
+P +D+V N MIS YA +EA +F + DE T +++S C ++G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
+ H I F S++ + +ALI++Y+K + A G+F+ + ++V++WNT+I G +
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL--SFQEFLS 401
E L L ++MLR G +P+++T+ S + C + AI H K S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 402 VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
+ SLI Y+KCG+I +A + F L +W ++I +A HG+A+ + ++F +M G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 462 VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+ PD ++F+G+LSAC+H G++ G H F MT Y++ P +HY C++DLLG GL EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 522 FELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQ 581
E++ M +E + + + +CK+H N+ L E AE L IEPE +Y +SNIYAS
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 582 RDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVCL 641
W +V R ++ DKG KVPGCS IE+ + VH F+ DK HP+ E+Y L+ + V L
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 642 DTS 644
+ +
Sbjct: 646 EKA 648
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 195/432 (45%), Gaps = 44/432 (10%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED------------- 110
LK AK EG+Q+H H++K G L + ++S+Y++ +ED
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 111 ------------------ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFK 152
A KLFDE+P ++VVSWN MI G A N ++ + FK
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA-----LELFK 255
Query: 153 RMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCG 212
M+ V PD T ++ +C Q +I +G Q+H + GF + + AL+DLY+KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
+E A F +P +D++ N +I Y L +EA +F + G ++ T S+L
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 273 VCDTLEYYDIGKLAHSLILR--QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
C L DIG+ H I + + + + ++LI+MYAK +I A VF+ +L +++
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI---TETLQT 387
+WN +I G +G L M + G PD++T +S C ++ + +T
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNIT-SALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
K++ + L +I G + + EPD V W SL+ A HG
Sbjct: 496 MTQDYKMTPK--LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 447 AEKATEMFEKML 458
E E ++
Sbjct: 554 VELGESFAENLI 565
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 325/601 (54%), Gaps = 30/601 (4%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+P+T L L + A R+ +G+++H ++I+ GFC + S+QN IL +Y + A
Sbjct: 124 EPNTSTL----VLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLC-VSYFKRMLLE-KVVPDYVTFNGL 169
KLFDE+ R+V+SW+++IR S P+ + FK M+ E K PD VT +
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYV------QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDL-DCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
+ +C +I VG +H ++++ GFDL D FV +L+D+Y+K V++A R F CR+
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+V N +++ + N +EA MF+L+ + DE T SLL VC E K H
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
+I+R+ ++S+ + S+LI+ Y + DA V D M ++VV+ +T+I G + G E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 349 VLKL---LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ-EFLSVAN 404
+ + +RD +P+ +T+ S ++ C ++ + + H IA++ S +SV
Sbjct: 413 AISIFCHMRD------TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
S++ AY+KCG I A + F E ++++WT +I AYA +G +KA +F++M G P
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTP 526
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
+ V++L LSAC H GLV KGL F M P HY+C+VD+L R G ID A EL
Sbjct: 527 NAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVEL 585
Query: 525 LRSMPVEVE--SDTLGAFIGSC--KLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYAS 580
++++P +V+ + GA + C + I +E AE L +EP S Y S+ +A+
Sbjct: 586 IKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLE-LEPLCSSGYLLASSTFAA 644
Query: 581 QRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVC 640
++ W DV R+++ ++ V G S + N F++ DK E+ ++ LH C
Sbjct: 645 EKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRC 704
Query: 641 L 641
+
Sbjct: 705 M 705
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 212/445 (47%), Gaps = 20/445 (4%)
Query: 84 IKFGFCHVLSL---QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNEN 140
I F C LS N I Y+KC ++ + FD + R+ VSWN+++ G+ E
Sbjct: 50 IVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEE 109
Query: 141 DSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV 200
+ + +F ++ + P+ T +I +C G ++H Y ++ GF V
Sbjct: 110 EG-----LWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGE--KIHGYVIRSGFCGISSV 162
Query: 201 GCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN-LLRMDG 259
+++ +YA + +AR+ F + RD++ +V+I Y + P +F ++
Sbjct: 163 QNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK 221
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD-SDVLVASALINMYAKNENITDA 318
D T +S+L C +E D+G+ H +R+ FD +DV V ++LI+MY+K ++ A
Sbjct: 222 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSA 281
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA 378
VFDE RN+V+WN+I+ G + E L++ M++E DE+T+ S + +C +
Sbjct: 282 FRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Query: 379 SAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLI 438
H + ++ ++ +SLI AY+ C + A D+V+ +++I
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--LVTKGLHYFNLMTSVY 496
A G++++A +F M P+ ++ + +L+AC+ +K H + S+
Sbjct: 402 SGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSL- 457
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEA 521
+ D T +VD + G I+ A
Sbjct: 458 -AINDISVGTSIVDAYAKCGAIEMA 481
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 35/390 (8%)
Query: 199 FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
F G ++ D Y KCG + + R F + RD V NV++ EE F+ LR+
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
G + T ++ C +L ++D G+ H ++R F V ++++ MYA +++++ A
Sbjct: 122 GFEPNTSTLVLVIHACRSL-WFD-GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS-PDELTISSTISLCGY 377
R +FDEM R+V++W+ +I + LKL ++M+ E + PD +T++S + C
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 378 ASAITETLQTHAIAVKLSFQ-EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
I H +++ F + V NSLI YSK ++ SA + F T ++V+W S
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA-----------HCGLVTKG 485
++ + + + ++A EMF M+ V D V+ + +L C H ++ +G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 486 LHYFNLMTSVY-------QIVPDS----------DHYTC--LVDLLGRYGLIDEAFELLR 526
+ S +V D+ D +C ++ L G DEA +
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 527 SMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
M + T+ + + +C + A++ ++WA
Sbjct: 419 HMRDTPNAITVISLLNACSVSADLRTSKWA 448
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 284/556 (51%), Gaps = 39/556 (7%)
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE---KVVPDYVTFNGL 169
K+ + N+ SWN+ IRG + +N +S +K+ML + PD+ T+ L
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKES-----FLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL 229
C +G + + +K+ +L V A + ++A CG +ENAR+ F P RDL
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL 289
V N +I+ Y E+A ++ L+ +G D+ T L+S C L + GK +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG---CG----- 341
+ + + +AL++M++K +I +AR +FD + R +V+W T+I G CG
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 342 -----------------------NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA 378
G + L L ++M PDE+T+ +S C
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 379 SAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLI 438
A+ + H K S +++ SL+ Y+KCGNI+ AL F + + +T+T++I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
A HG A A F +M+ G+ PD ++F+G+LSAC H G++ G YF+ M S + +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
P HY+ +VDLLGR GL++EA L+ SMP+E ++ GA + C++H N+ L E AA+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 559 KLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFV 618
KL ++P S Y + +Y W D + AR+M+ ++G K+PGCS IEV V F+
Sbjct: 583 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFI 642
Query: 619 SRDKTHPKALEMYATL 634
RDK+ P++ ++Y L
Sbjct: 643 VRDKSRPESEKIYDRL 658
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 186/428 (43%), Gaps = 38/428 (8%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
KV A G + H++K V + N + ++ C ++E+A K+FDE P R++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSWN +I G + A + +K M E V PD VT GL+ SC ++ G
Sbjct: 223 VSWNCLINGY-----KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+ + Y + G + + AL+D+++KCG + ARR F + R +V MIS YA
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 244 L-------------------------------PEEAFSMFNLLRMDGANGDEFTFSSLLS 272
L ++A ++F ++ DE T LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 273 VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA 332
C L D+G H I + + +V + ++L++MYAK NI++A VF + RN +
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA-IA 391
+ II G +GD S + +M+ G +PDE+T +S C + I + +
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKA 450
+ + L + ++ + G + A + + E D W +L+ HG E
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 451 TEMFEKML 458
+ +K+L
Sbjct: 578 EKAAKKLL 585
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 47 QTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCK 106
QT PD + + + L ++ L G +H ++ K+ ++L ++ +Y KC
Sbjct: 381 QTSNTKPDEITMI--HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 107 EIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
I +A +F + RN +++ +I G+A + A +SYF M+ + PD +TF
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGD-----ASTAISYFNEMIDAGIAPDEITF 493
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARRAFCAV 224
GL+ +C I G + + +K F+L+ + +VDL + GL+E A R ++
Sbjct: 494 IGLLSACCHGGMIQTG-RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 225 P 225
P
Sbjct: 553 P 553
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 292/569 (51%), Gaps = 26/569 (4%)
Query: 50 FRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILS----VYLKC 105
FR D V + ALK + L GK++H L+K V S N +L+ +Y KC
Sbjct: 138 FRYDDIVF---SKALKACTELQDLDNGKKIHCQLVK-----VPSFDNVVLTGLLDMYAKC 189
Query: 106 KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLC---VSYFKRMLLEKVVPD 162
EI+ A K+F+++ RNVV W MI G D LC + F RM V+ +
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKND--------LCEEGLVLFNRMRENNVLGN 241
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
T+ LI +C + + G H VK G +L + +L+D+Y KCG + NARR F
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
DLVM MI Y N EA S+F ++ + T +S+LS C +E ++
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
G+ H L ++ D VA+AL++MYAK DA+ VF+ +++VAWN+II G
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF--QEFL 400
G E L L M E +P+ +T++S S C ++ HA +VKL F +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 401 SVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC 460
V +L+ Y+KCG+ SA F EE + +TW+++I Y G + E+FE+ML
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
P+ +F +LSAC H G+V +G YF+ M Y P + HYTC+VD+L R G +++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYAS 580
A +++ MP++ + GAF+ C +H+ L E +K+ + P+ + Y +SN+YAS
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 581 QRDWCDVESARKMIGDKGDAKVPGCSWIE 609
W + R ++ +G +K+ G S +E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 213/417 (51%), Gaps = 9/417 (2%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+Q H L G +S+ +++S+Y +DA +FD++P + W +M+R
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYC-- 118
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
N S + V + ++ D + F+ + +C + ++ G ++HC VKV
Sbjct: 119 --LNKESVEV-VKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SF 174
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D V L+D+YAKCG +++A + F + R++V MI+ Y N L EE +FN +R
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+ G+E+T+ +L+ C L GK H +++ + + ++L++MY K +I+
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
+AR VF+E ++V W +IVG + G +E L L + M P+ +TI+S +S CG
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
+ H +++K+ + +VAN+L+ Y+KC A F + E D+V W S
Sbjct: 355 LIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNL 491
+I ++ +G +A +F +M S V P+ V+ + SACA G + G LH +++
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 140/301 (46%), Gaps = 3/301 (0%)
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
NI Q H G D + LV LY G ++AR F +P D + VM+
Sbjct: 56 NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH-SLILRQAFD 296
CY LN E +++LL G D+ FS L C L+ D GK H L+ +FD
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD 175
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
+ VL + L++MYAK I A VF+++ +RNVV W ++I G E L L M
Sbjct: 176 NVVL--TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
+E T + I C SA+ + H VK + + SL+ Y KCG+I
Sbjct: 234 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 417 TSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
++A + F DLV WT++I Y +G +A +F+KM + P+ V+ VLS C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 477 A 477
Sbjct: 354 G 354
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/688 (30%), Positives = 324/688 (47%), Gaps = 104/688 (15%)
Query: 52 DPDTV----HLFCAN-ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCK 106
+PD V + + AN L + +R L + +H ++I FGF + N+++ VY K
Sbjct: 4 NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS 63
Query: 107 EIEDADKLFDELPGRNVVSWNIMIRG------------------------------VAGR 136
E+ A +LFDE+ + ++ M+ G + G
Sbjct: 64 ELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGF 123
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNG-LIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+ ND + ++ F +M E PD TF L G + + +Q H +K G
Sbjct: 124 SHNNDGYS--AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAG 181
Query: 196 LDCFVGCALVDLYAKCG----LVENARRAFCAVPCRD----------------------- 228
V ALV +Y+KC L+ +AR+ F + +D
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Query: 229 ---------LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEY 279
LV N MIS Y +EA M + G DEFT+ S++ C T
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 280 YDIGKLAHSLILRQA-----FDS-------------------------DVLVASALINMY 309
+GK H+ +LR+ FD+ D++ +AL++ Y
Sbjct: 302 LQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGY 361
Query: 310 AKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
+ +I +A+ +F EM +N+++W +I G G G E LKL M REGF P + S
Sbjct: 362 VSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
I C A Q HA +K+ F LS N+LI+ Y+KCG + A + FR
Sbjct: 422 GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL 481
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
D V+W +LI A HG +A +++E+ML G+ PDR++ L VL+AC+H GLV +G YF
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+ M +VY+I P +DHY L+DLL R G +A ++ S+P + ++ A + C++H N
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ L AA+KLF + PE Y +SN++A+ W +V RK++ D+G K CSWIE
Sbjct: 602 MELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Query: 610 VANQVHSFVSRDKTHPKALEMYATLKML 637
+ QVH+F+ D +HP+A +Y L+ L
Sbjct: 662 METQVHTFLVDDTSHPEAEAVYIYLQDL 689
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 155/357 (43%), Gaps = 60/357 (16%)
Query: 225 PCRDLVMCNVMISCYALN---CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL--EY 279
P DLV + + YA N CLP S+ L R N F F + + L Y
Sbjct: 3 PNPDLV--RAIANRYAANLRLCLPLRRTSL-QLARAVHGNIITFGFQPRAHILNRLIDVY 59
Query: 280 YDIGKLAHSLILRQAFDS----DVLVASALINMYAKNENITDARGVFDE--MLIRNVVAW 333
+L ++ RQ FD D + + +++ Y + +IT ARGVF++ + +R+ V +
Sbjct: 60 CKSSELNYA---RQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMY 116
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS-LCGYASAITETLQTHAIAV 392
N +I G + DG + L M EGF PD T +S ++ L A + +Q HA A+
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL 176
Query: 393 KLSFQEFLSVANSLISAYSKCGN----ITSALKCFRLTEEPDLVTWTS------------ 436
K SV+N+L+S YSKC + + SA K F E D +WT+
Sbjct: 177 KSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD 236
Query: 437 --------------------LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
+I Y G ++A EM +M+S G+ D ++ V+ AC
Sbjct: 237 LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 477 AHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
A GL+ G +H + L + D+ LV L + G DEA + MP +
Sbjct: 297 ATAGLLQLGKQVHAYVLRREDFSFHFDNS----LVSLYYKCGKFDEARAIFEKMPAK 349
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 305/613 (49%), Gaps = 81/613 (13%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDN------------END-- 141
N ++S YL+ E E A KLFDE+P R++VSWN+MI+G N E D
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 142 --------SSAPLCV----SYFKRM----------LLEKVVPD----------------- 162
+ CV S F RM LL V +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD----LDCFVGCALVDLYAKCGLVENAR 218
V++N L+G V+ I Q FD D ++ YA+ G ++ AR
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQF--------FDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
+ F P +D+ M+S Y N + EEA +F+ + +E +++++L+ E
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGE 326
Query: 279 YYDIGKLAHSLILRQAFD----SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
++ K + FD +V + +I YA+ I++A+ +FD+M R+ V+W
Sbjct: 327 RMEMAK--------ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+I G G E L+L M REG + + SS +S C A+ Q H VK
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
++ V N+L+ Y KCG+I A F+ D+V+W ++I Y+ HG E A F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 455 EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGR 514
E M G+ PD + + VLSAC+H GLV KG YF MT Y ++P+S HY C+VDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 515 YGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAM 574
GL+++A L+++MP E ++ G +G+ ++H N LAE AA+K+F +EPE S Y +
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 575 SNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
SN+YAS W DV R + DKG KVPG SWIE+ N+ H+F D+ HP+ E++A L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 635 KMLHVCLDTSCWL 647
+ L + + + ++
Sbjct: 679 EELDLRMKKAGYV 691
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Query: 89 CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCV 148
C +S N +++ Y +C +I +A LFD++P R+ VSW MI G + + ++ +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA-----L 394
Query: 149 SYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLY 208
F +M E + +F+ + +C + +G QLH VK G++ CFVG AL+ +Y
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 209 AKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
KCG +E A F + +D+V N MI+ Y+ + E A F ++ +G D+ T
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 269 SLLSVCDTLEYYDIGK 284
++LS C D G+
Sbjct: 515 AVLSACSHTGLVDKGR 530
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 158/389 (40%), Gaps = 58/389 (14%)
Query: 163 YVTFNGLIGSC------VQFHNIGVGIQLHCYT------VKVGFDLDCFVGCALVDLYAK 210
Y + NGL C FH++ Q +K G D D + Y +
Sbjct: 18 YTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMR 76
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
G A R F +P V N MIS Y N E A +F DE L
Sbjct: 77 TGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF----------DEMPERDL 126
Query: 271 LSVCDTLEYY----DIGKLAHSLILRQAFD----SDVLVASALINMYAKNENITDARGVF 322
+S ++ Y ++GK R+ F+ DV + +++ YA+N + DAR VF
Sbjct: 127 VSWNVMIKGYVRNRNLGKA------RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
D M +N V+WN ++ E L + RE ++ +S L G+
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENWA----LVSWNCLLGGFVKK-K 233
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
+ ++ ++ ++ +S N++I+ Y++ G I A + F + D+ TWT+++ Y
Sbjct: 234 KIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 443 FHGQAEKATEMFEKMLSCGVVPDR--VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
+ E+A E+F+KM P+R VS+ +L+ + F++M
Sbjct: 293 QNRMVEEARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELFDVMP-----CR 341
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ + ++ + G I EA L MP
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
++AL A L GKQLH L+K G+ + N +L +Y KC IE+A+ LF E+ G
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+++VSWN MI G + + + +F+ M E + PD T ++ +C +
Sbjct: 473 KDIVSWNTMIAGYS-----RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 181 VGIQ-LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
G Q + T G + +VDL + GL+E+A +P
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 275/476 (57%), Gaps = 5/476 (1%)
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF 221
D T++ LI C+ + G + + G F+ L+++Y K L+ +A + F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 222 CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
+P R+++ MIS Y+ + ++A + L+ D + +T+SS+L C+ + D
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS--D 177
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
+ ++ H I+++ +SDV V SALI+++AK DA VFDEM+ + + WN+II G
Sbjct: 178 V-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 342 NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLS 401
L+L + M R GF ++ T++S + C + + +Q H VK + + L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 402 VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
+ N+L+ Y KCG++ AL+ F +E D++TW+++I A +G +++A ++FE+M S G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 462 VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
P+ ++ +GVL AC+H GL+ G +YF M +Y I P +HY C++DLLG+ G +D+A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 522 FELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQ 581
+LL M E ++ T +G+C++ N+ LAE+AA+K+ ++PE + Y +SNIYA+
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 582 RDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
+ W VE R + D+G K PGCSWIEV Q+H+F+ D +HP+ +E+ L L
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 184/368 (50%), Gaps = 12/368 (3%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
EG + HL G ++ L N ++++Y+K + DA +LFD++P RNV+SW MI +
Sbjct: 79 EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
+ L + ML + V P+ T++ ++ SC ++ + LHC +K G
Sbjct: 139 KCKIHQKALELLVL-----MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGL 190
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ D FV AL+D++AK G E+A F + D ++ N +I +A N + A +F
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
++ G ++ T +S+L C L ++G AH I++ +D D+++ +AL++MY K +
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 308
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ DA VF++M R+V+ W+T+I G G E LKL M G P+ +TI +
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 375 CGYASAITETLQTHAIAVKL-SFQEFLSVANSLISAYSKCGNITSALKCFRLTE-EPDLV 432
C +A + + KL +I K G + A+K E EPD V
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 433 TWTSLIHA 440
TW +L+ A
Sbjct: 429 TWRTLLGA 436
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 298/601 (49%), Gaps = 31/601 (5%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A+ L+ A + L G QLHAH +K F ++ L +Y KC ++DA LFD
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
N S+N MI G + E+ A L F R++ + D ++ +G+ +C +
Sbjct: 345 LNRQSYNAMITGYS--QEEHGFKALLL---FHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G+Q++ +K LD V A +D+Y KC + A R F + RD V N +I+ +
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC--DTLEYYDIGKLAHSLILRQAFDSD 298
N E +F + DEFTF S+L C +L Y G HS I++ S+
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY---GMEIHSSIVKSGMASN 516
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIR-NV-------------------VAWNTIIV 338
V +LI+MY+K I +A + R NV V+WN+II
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 576
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQE 398
G + L M+ G +PD+ T ++ + C ++ Q HA +K Q
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 399 FLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ + ++L+ YSKCG++ + F + D VTW ++I YA HG+ E+A ++FE+M+
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLI 518
+ P+ V+F+ +L ACAH GL+ KGL YF +M Y + P HY+ +VD+LG+ G +
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 519 DEAFELLRSMPVEVESDTLGAFIGSCKLHA-NIGLAEWAAEKLFIIEPEKSVNYAAMSNI 577
A EL+R MP E + +G C +H N+ +AE A L ++P+ S Y +SN+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 578 YASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
YA W V R+ + K PGCSW+E+ +++H F+ DK HP+ E+Y L ++
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Query: 638 H 638
+
Sbjct: 877 Y 877
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 227/487 (46%), Gaps = 34/487 (6%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
K AK+ L GKQ HAH+I GF + N +L VY ++ A +FD++P R+V
Sbjct: 55 FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV 114
Query: 124 VSWNIMIRGVAGRDN---------------------------ENDSSAPLCVSYFKRMLL 156
VSWN MI G + ++ +N S + F M
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK-SIEVFVDMGR 173
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN 216
E + D TF ++ C + +G+Q+H V+VG D D AL+D+YAK
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDT 276
+ R F +P ++ V + +I+ N L A F ++ A + ++S+L C
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 277 LEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTI 336
L +G H+ L+ F +D +V +A ++MYAK +N+ DA+ +FD N ++N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 337 IVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF 396
I G G + L L ++ G DE+++S C ++E LQ + +A+K S
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
+ VAN+ I Y KC + A + F D V+W ++I A+ +G+ + +F
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ--IVPDSDHYTCLVDLLGR 514
ML + PD +F +L AC G + G+ + +S+ + + +S L+D+ +
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGME---IHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 515 YGLIDEA 521
G+I+EA
Sbjct: 530 CGMIEEA 536
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 212/463 (45%), Gaps = 31/463 (6%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G Q+H +++ G + + +L +Y K K ++ ++F +P +N VSW+ +I G
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV- 257
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
++ L + +FK M + ++ SC + +G QLH + +K F
Sbjct: 258 ----QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA 313
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D V A +D+YAKC +++A+ F + N MI+ Y+ +A +F+ L
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
G DE + S + C ++ G + L ++ + DV VA+A I+MY K + +
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
+A VFDEM R+ V+WN II G G E L L MLR PDE T S + C
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDL--- 431
S + ++ H+ VK SV SLI YSKCG I A K R + ++
Sbjct: 494 TGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 432 ----------------VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
V+W S+I Y Q+E A +F +M+ G+ PD+ ++ VL
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC--LVDLLGRYG 516
CA+ L + GL + V + SD Y C LVD+ + G
Sbjct: 613 CAN--LASAGLGK-QIHAQVIKKELQSDVYICSTLVDMYSKCG 652
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 288/534 (53%), Gaps = 18/534 (3%)
Query: 118 LPGRNVVSW--NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT--------FN 167
LP N++ + N +IR N SS +S E+V P + +
Sbjct: 6 LPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVH 65
Query: 168 GLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
++ C + + H +++ + D + L++ Y+KCG VE AR+ F + R
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC----DTLEYYDIG 283
LV N MI Y N + EA +F +R +G EFT SS+LS C D LE
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC---- 181
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
K H L ++ D ++ V +AL+++YAK I DA VF+ M ++ V W++++ G
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
+ E L L R R ++ T+SS I C +A+ E Q HA+ K F + VA
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
+S + Y+KCG++ + F +E +L W ++I +A H + ++ +FEKM G+
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
P+ V+F +LS C H GLV +G +F LM + Y + P+ HY+C+VD+LGR GL+ EA+E
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 524 LLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRD 583
L++S+P + + G+ + SC+++ N+ LAE AAEKLF +EPE + N+ +SNIYA+ +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 584 WCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
W ++ +RK++ D KV G SWI++ ++VH+F + HP+ E+ +TL L
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 180/334 (53%), Gaps = 9/334 (2%)
Query: 50 FRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIE 109
F + + VH L++ A+ + E K H +I+ ++L N +++ Y KC +E
Sbjct: 58 FSNRNLVH----EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 110 DADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
A ++FD + R++VSWN MI G+ R N +S A + F M E T + +
Sbjct: 114 LARQVFDGMLERSLVSWNTMI-GLYTR-NRMESEA---LDIFLEMRNEGFKFSEFTISSV 168
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL 229
+ +C + +LHC +VK DL+ +VG AL+DLYAKCG++++A + F ++ +
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL 289
V + M++ Y N EEA ++ + ++FT SS++ C L GK H++
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
I + F S+V VAS+ ++MYAK ++ ++ +F E+ +N+ WNTII G + EV
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
+ L M ++G P+E+T SS +S+CG+ + E
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 71 AFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
A L EGKQ+HA + K GF + + + + +Y KC + ++ +F E+ +N+ WN +I
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ-LHCYT 189
G A + + F++M + + P+ VTF+ L+ C + G +
Sbjct: 337 SGFAKHARPKE-----VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 190 VKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
G + +VD+ + GL+ A ++P
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 304/585 (51%), Gaps = 17/585 (2%)
Query: 64 LKVSAKRAFLPE-GKQLHAHLIKFG----------FCHVLSLQNQILSVYLKCKEIEDAD 112
L + + + P G LHA +IK + L + N +LS+Y KC ++ DA
Sbjct: 51 LSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAI 110
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
KLFDE+P R+V+S NI+ G R+ E +S L KRML D+ T ++
Sbjct: 111 KLFDEMPMRDVISQNIVFYGFL-RNRETESGFVL----LKRMLGSGGF-DHATLTIVLSV 164
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
C V +H + G+D + VG L+ Y KCG + R F + R+++
Sbjct: 165 CDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITL 224
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
+IS N L E+ +F+L+R + + T+ S L+ C + G+ H+L+ +
Sbjct: 225 TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 284
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
+S++ + SAL++MY+K +I DA +F+ + V+ I+VG G E ++
Sbjct: 285 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF 344
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
ML+ G D +S+ + + +++ Q H++ +K F V N LI+ YSK
Sbjct: 345 FIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 404
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGV 472
CG++T + FR + + V+W S+I A+A HG A +++E+M + V P V+FL +
Sbjct: 405 CGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 464
Query: 473 LSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEV 532
L AC+H GL+ KG N M V+ I P ++HYTC++D+LGR GL+ EA + S+P++
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 524
Query: 533 ESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARK 592
+ A +G+C H + + E+AAE+LF P+ S + ++NIY+S+ W + K
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 593 MIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
+ G K G S IE+ ++ HSFV DK HP+A +Y L L
Sbjct: 585 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 302/601 (50%), Gaps = 16/601 (2%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
L S+ VPD F P+ + + A R FL G+ +H ++K G+ + + +
Sbjct: 98 LNCSICVPDSFTF--PNVIKAYGALG------REFL--GRMIHTLVVKSGYVCDVVVASS 147
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE 157
++ +Y K E++ ++FDE+P R+V SWN +I A + F RM
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY-----QSGEAEKALELFGRMESS 202
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
P+ V+ I +C + + G ++H VK GF+LD +V ALVD+Y KC +E A
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
R F +P + LV N MI Y + + N + ++G + T +S+L C
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
GK H ++R ++D+ V +LI++Y K A VF + +WN +I
Sbjct: 323 RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMI 382
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
+ G+ + +++ M+ G PD +T +S + C +A+ + Q H + +
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE 442
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
+ ++L+ YSKCGN A + F + D+V+WT +I AY HGQ +A F++M
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
G+ PD V+ L VLSAC H GL+ +GL +F+ M S Y I P +HY+C++D+LGR G
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 518 IDEAFELLRSMPVEVE-SDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSN 576
+ EA+E+++ P + ++ L +C LH L + A L P+ + Y + N
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFN 622
Query: 577 IYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKM 636
+YAS W R + + G K PGCSWIE++++V F + D++H +A +Y L +
Sbjct: 623 LYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLAL 682
Query: 637 L 637
L
Sbjct: 683 L 683
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 231/472 (48%), Gaps = 14/472 (2%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
C N+ K S +R K +H ++ G + L +++VY CK+ A +F+
Sbjct: 13 CTNSTK-SLRRI-----KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 120 GR-NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV-VPDYVTFNGLIGSCVQFH 177
R +V WN ++ G + +D+ + FKR+L + VPD TF +I +
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDT-----LEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
+G +H VK G+ D V +LV +YAK L EN+ + F +P RD+ N +IS
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
C+ + E+A +F + G + + + +S C L + + GK H +++ F+
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
D V SAL++MY K + + AR VF +M +++VAWN++I G GD +++L M+
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
EG P + T++S + C + + H ++ + V SLI Y KCG
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
A F T++ +W +I +Y G KA E++++M+S GV PD V+F VL AC+
Sbjct: 362 LAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 478 HCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ KG +L S ++ D + L+D+ + G EAF + S+P
Sbjct: 422 QLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 288/556 (51%), Gaps = 9/556 (1%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G L++ +IK G+ + +Q +L +Y C ++E A ++FD + R+ V+WN MI G
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D D + +F+ ML+ V P T++ ++ C + + +G +H +
Sbjct: 278 NDKIEDG-----LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN-L 254
D + AL+D+Y CG + A F + +LV N +IS + N E+A M+ L
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
LRM DE+TFS+ +S E + GKL H + + ++ V V + L++MY KN
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
A+ VFD M R+VV W +IVG G+ ++ +M RE D ++SS I
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
C + + + H +A++ F +SV +L+ Y K G +A F L PDL W
Sbjct: 513 CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS 494
S++ AY+ HG EKA FE++L G +PD V++L +L+AC+H G +G +N M
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELL-RSMPVEVESDTLGAFIGSCKLHANIGLA 553
I HY+C+V+L+ + GL+DEA EL+ +S P +++ + +C N+ +
Sbjct: 633 -QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG 691
Query: 554 EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEV-AN 612
+AAE++ ++PE + + +SN+YA W DV R+ I +K PG SWIEV N
Sbjct: 692 LYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNN 751
Query: 613 QVHSFVSRDKTHPKAL 628
F S D+++P+ +
Sbjct: 752 NTQVFSSGDQSNPEVV 767
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 231/482 (47%), Gaps = 26/482 (5%)
Query: 73 LPEGKQLHAHLIKFGFCHVLS---LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
L +Q+HA ++ G N ++S+Y++C +E A K+FD++P RNVVS+N +
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYT 189
+ + + PL M E V P+ TF L+ C ++ +G L+
Sbjct: 170 YSAYSRNPDFASYAFPLTT----HMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 190 VKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF 249
+K+G+ + V +++ +Y+ CG +E+ARR F V RD V N MI N E+
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGL 285
Query: 250 SMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
F + M G + +FT+S +L+ C L Y +GKL H+ I+ +D+ + +AL++MY
Sbjct: 286 MFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMY 345
Query: 310 AKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF-SPDELTI 368
++ +A VF + N+V+WN+II GC G G + + + R +LR PDE T
Sbjct: 346 CSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Query: 369 SSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE 428
S+ IS H KL ++ + V +L+S Y K SA K F + +E
Sbjct: 406 SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE 465
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
D+V WT +I ++ G +E A + F +M D S V+ AC+ ++ +G
Sbjct: 466 RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG--- 522
Query: 489 FNLMTSVYQIVPDSDHYTC-------LVDLLGRYGLIDEA---FELLRSMPVEVESDTLG 538
V+ + + C LVD+ G+ G + A F L + ++ + LG
Sbjct: 523 -----EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLG 577
Query: 539 AF 540
A+
Sbjct: 578 AY 579
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 190/397 (47%), Gaps = 20/397 (5%)
Query: 95 QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRM 154
N ++S+Y++C +E A K+FD++P RN+V+ + G++ + L K
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVT----LFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGI-------QLHCYTVKVGFDLDC---FVGCAL 204
+ + ++ N + S V+ V I Q+H + G + L
Sbjct: 81 SFQMIF--FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 205 VDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC-LPEEAFSMFNLLRMDGANGD 263
+ +Y +CG +E AR+ F +P R++V N + S Y+ N AF + + + +
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD 323
TF+SL+ VC LE +G +S I++ + +V+V ++++ MY+ ++ AR +FD
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 324 EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
+ R+ VAWNT+IVG + L R+ML G P + T S ++ C + +
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 384 TLQTHA-IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
HA I V S + L + N+L+ Y CG++ A F P+LV+W S+I +
Sbjct: 319 GKLIHARIIVSDSLAD-LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 443 FHGQAEKATEMFEKMLSCGV-VPDRVSFLGVLSACAH 478
+G E+A M+ ++L PD +F +SA A
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 17/307 (5%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
LR S PD+ F + A+ +A+ GK LH + K G+ + +
Sbjct: 393 LRMSTPRPDEYTF----------SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE 157
+LS+Y K +E E A K+FD + R+VV W MI G + N + L V +F M E
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN-----SELAVQFFIEMYRE 497
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
K D + + +IG+C + G HC ++ GFD V ALVD+Y K G E A
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
F DL N M+ Y+ + + E+A S F + +G D T+ SLL+ C
Sbjct: 558 ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHR 617
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA--WNT 335
GK + + Q + S ++N+ +K + +A + ++ N A W T
Sbjct: 618 GSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRT 677
Query: 336 IIVGCGN 342
++ C N
Sbjct: 678 LLSACVN 684
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 291/573 (50%), Gaps = 10/573 (1%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD L L V A+ + GK +H +K L L N ++ +Y KC I +A
Sbjct: 290 PDVATL--VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL--EKVVPDYVTFNGLI 170
+F +NVVSWN M+ G + E D+ V ++ML E V D VT +
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSA---EGDTHGTFDV--LRQMLAGGEDVKADEVTILNAV 402
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
C + +LHCY++K F + V A V YAKCG + A+R F + + +
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
N +I +A + P + +++ G D FT SLLS C L+ +GK H I
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+R + D+ V +++++Y + + +FD M +++V+WNT+I G G L
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+ R M+ G +++ C ++ + HA A+K ++ +A SLI Y
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
+K G+IT + K F +E +W ++I Y HG A++A ++FE+M G PD ++FL
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL-RSMP 529
GVL+AC H GL+ +GL Y + M S + + P+ HY C++D+LGR G +D+A ++ M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 530 VEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVES 589
E + + + SC++H N+ + E A KLF +EPEK NY +SN+YA W DV
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 590 ARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDK 622
R+ + + K GCSWIE+ +V SFV ++
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 215/423 (50%), Gaps = 15/423 (3%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLS---LQNQILSVYLKCKEIEDADKLFDELPG 120
L+ S KR + G+++H + G + + L +I+++Y C +D+ +FD L
Sbjct: 91 LQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+N+ WN +I + N+ + ++ + + ++PD+ T+ +I +C ++G
Sbjct: 149 KNLFQWNAVISSYS----RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
+G+ +H VK G D FVG ALV Y G V +A + F +P R+LV N MI ++
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 241 LNCLPEEAFSMFNLLRMDGANG----DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
N EE+F + + + +G D T ++L VC +GK H ++ D
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
++++ +AL++MY+K IT+A+ +F +NVV+WNT++ G GD +LR M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 357 LREG--FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCG 414
L G DE+TI + + +C + S + + H ++K F VAN+ +++Y+KCG
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 415 NITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
+++ A + F + +W +LI +A + + +M G++PD + +LS
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 475 ACA 477
AC+
Sbjct: 505 ACS 507
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 293/577 (50%), Gaps = 44/577 (7%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
+ L++ L G+Q+H H IK GF +++ N +L++Y +CK I +A+ LF+ + G
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 121 -RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
+N V+W M+ G + + A + F+ + E + TF ++ +C
Sbjct: 189 EKNNVTWTSMLTGYS-----QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
VG+Q+HC VK GF + +V AL+D+YAKC +E+AR + D+V N MI
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD--IGKLAHSLILRQAFDS 297
L EA SMF + D+FT S+L+ C L + I AH LI++ + +
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
LV +AL++MYAK + A VF+ M+ ++V++W ++ G + G E LKL +M
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR 422
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
G +PD++ +S +S + + Q H +K F LSV NSL++ Y+KCG++
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
A F E DL+TWT LI YA +G E A
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQ-------------------------- 516
Query: 478 HCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
YF+ M +VY I P +HY C++DL GR G + +LL M VE ++
Sbjct: 517 ---------RYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVW 567
Query: 538 GAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDK 597
A + + + H NI E AA+ L +EP +V Y +SN+Y++ + + R+++ +
Sbjct: 568 KAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSR 627
Query: 598 GDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
+K PGCSW+E +VHSF+S D+ HP+ +E+Y+ +
Sbjct: 628 NISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 28/356 (7%)
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ D F ++ Y+ + +A + F + P ++ + N +IS Y + EAF++F
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
++ DG +E+T S+L +C +L G+ H ++ FD DV V + L+ MYA+ +
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 315 ITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS 373
I++A +F+ M +N V W +++ G G + ++ RD+ REG ++ T S ++
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 374 LCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
C SA +Q H VK F+ + V ++LI Y+KC + SA E D+V+
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVL------------SACAHCGL 481
W S+I G +A MF +M + D + +L ++ AHC +
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 482 VTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
V G + Y++V ++ LVD+ + G++D A ++ M +E D +
Sbjct: 356 VKTGY-------ATYKLVNNA-----LVDMYAKRGIMDSALKVFEGM---IEKDVI 396
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 279 YYDIGKLAHSLIL------------RQAFDS----DVLVASALINMYAKNENITDARGVF 322
Y D KL +L+L RQ FD D + +I Y+ + ++DA +F
Sbjct: 23 YADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLF 82
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
++N ++WN +I G G E L +M +G P+E T+ S + +C +
Sbjct: 83 RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLL 142
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE-EPDLVTWTSLIHAY 441
Q H +K F ++V N L++ Y++C I+ A F E E + VTWTS++ Y
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY 202
Query: 442 AFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA-----------HCGLVTKGLHYFN 490
+ +G A KA E F + G ++ +F VL+ACA HC +V G
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK--- 259
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
T++Y + L+D+ + ++ A LL M V+
Sbjct: 260 --TNIYV-------QSALIDMYAKCREMESARALLEGMEVD 291
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 308/595 (51%), Gaps = 21/595 (3%)
Query: 44 VPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYL 103
VPDQ F + +K A + + GKQLHA +IK L QN ++++Y+
Sbjct: 165 VPDQFAF----------GSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 104 KCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV-PD 162
+ ++ DA ++F +P ++++SW+ +I G + E ++ +S+ K ML V P+
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA-----LSHLKEMLSFGVFHPN 269
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
F + +C G Q+H +K + GC+L D+YA+CG + +ARR F
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
+ D NV+I+ A N +EA S+F+ +R G D + SLL
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN---VVAWNTIIVG 339
G HS I++ F +D+ V ++L+ MY ++ +F++ RN V+WNTI+
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF--RNNADSVSWNTILTA 447
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
C + E+L+L + ML PD +T+ + + C S++ Q H ++K
Sbjct: 448 CLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPE 507
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ N LI Y+KCG++ A + F + D+V+W++LI YA G E+A +F++M S
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
G+ P+ V+F+GVL+AC+H GLV +GL + M + + I P +H +C+VDLL R G ++
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 520 EAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYA 579
EA + M +E + + +CK N+ LA+ AAE + I+P S + + +++A
Sbjct: 628 EAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHA 687
Query: 580 SQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
S +W + R + K+PG SWIE+ +++H F + D HP+ ++Y L
Sbjct: 688 SSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 234/480 (48%), Gaps = 23/480 (4%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLF 115
+ L CA S+ R+ L +G+++H H++ + L N ILS+Y KC + DA ++F
Sbjct: 71 ISLICA----CSSSRS-LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVF 125
Query: 116 DELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
D +P RN+VS+ +I G + +N A Y K ML E +VPD F +I +C
Sbjct: 126 DFMPERNLVSYTSVITGYS----QNGQGAEAIRLYLK-MLQEDLVPDQFAFGSIIKACAS 180
Query: 176 FHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVM 235
++G+G QLH +K+ AL+ +Y + + +A R F +P +DL+ + +
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 236 ISCYALNCLPEEAFS-MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA 294
I+ ++ EA S + +L + +E+ F S L C +L D G H L ++
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLR 354
+ + +L +MYA+ + AR VFD++ + +WN II G N G E + +
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 355 DMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCG 414
M GF PD +++ S + A+++ +Q H+ +K F L+V NSL++ Y+ C
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 415 NITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
++ CF L E+ D V+W +++ A H Q + +F+ ML PD ++
Sbjct: 421 DLYC---CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMG 477
Query: 471 GVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+L C + G +H ++L T + P+ L+D+ + G + +A + SM
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTG---LAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 14/360 (3%)
Query: 140 NDSSAPLCVSYFKRMLLEKVVPDYV-----------TFNGLIGSCVQFHNIGVGIQLHCY 188
ND LC S F R LE D+ T+ LI +C ++ G ++H +
Sbjct: 35 NDHINSLCKSNFYREALEAF--DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 189 TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
+ D + ++ +Y KCG + +AR F +P R+LV +I+ Y+ N EA
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM 308
++ + + D+F F S++ C + +GK H+ +++ S ++ +ALI M
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELT 367
Y + ++DA VF + ++++++W++II G G E L L++ML G F P+E
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE 427
S++ C Q H + +K SL Y++CG + SA + F E
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
PD +W +I A +G A++A +F +M S G +PD +S +L A +++G+
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 307/586 (52%), Gaps = 11/586 (1%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PDT L + LK + + + G+ LHA+ +K + + + +L +Y + +I+ +
Sbjct: 106 PDTSVL--SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 113 KLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
++F E+P RN V+W +I G+ AGR E ++YF M + + D TF +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEG-------LTYFSEMSRSEELSDTYTFAIAL 216
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C + G +H + + GF V +L +Y +CG +++ F + RD+V
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+I Y +A F +R +E TF+S+ S C +L G+ H +
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
L + + V+++++ MY+ N+ A +F M R++++W+TII G G G E
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
K M + G P + ++S +S+ G + I Q HA+A+ ++ +V +SLI+ Y
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
SKCG+I A F T+ D+V+ T++I+ YA HG++++A ++FEK L G PD V+F+
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
VL+AC H G + G HYFN+M Y + P +HY C+VDLL R G + +A +++ M
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSW 576
Query: 531 EVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESA 590
+ + + +CK +I AAE++ ++P + ++NIY+S + + +
Sbjct: 577 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANV 636
Query: 591 RKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKM 636
RK + KG K PG S I++ + V +FVS D+ HP++ ++Y L++
Sbjct: 637 RKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 212/471 (45%), Gaps = 11/471 (2%)
Query: 51 RDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED 110
R+ T+ FC ++ + K + + ++KF N L + +
Sbjct: 6 RNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFD-------PNSHLRSLINAGNLRA 58
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
A ++FD++P ++VSW +I+ N+S L + R++ V PD + ++
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYV---TANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C Q NI G LH Y VK +VG +L+D+Y + G ++ + R F +P R+ V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+I+ +E + F+ + D +TF+ L C L GK H+ +
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+ + F + + VA++L MY + + D +F+ M R+VV+W ++IV G + +
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+ M P+E T +S S C S + Q H + L + LSV+NS++ Y
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
S CGN+ SA F+ D+++W+++I Y G E+ + F M G P +
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+LS + ++ G L + + +S + L+++ + G I EA
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMYSKCGSIKEA 465
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 273/531 (51%), Gaps = 6/531 (1%)
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
A +L +L ++ W+ +I +G N + L + +R V+P TF L+
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRR---NGVIPSRHTFPPLL 111
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+ + + Q H + VK G D D FV +L+ Y+ GL + A R F +D+V
Sbjct: 112 KAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
MI + N EA F ++ G +E T S+L +E G+ H L
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 291 LRQA-FDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
L DV + S+L++MY K DA+ VFDEM RNVV W +I G +
Sbjct: 231 LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKG 290
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
+ + +ML+ +P+E T+SS +S C + A+ + H +K S + + +LI
Sbjct: 291 MLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDL 350
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y KCG + A+ F E ++ TWT++I+ +A HG A A ++F MLS V P+ V+F
Sbjct: 351 YVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ VLSACAH GLV +G F M + + P +DHY C+VDL GR GL++EA L+ MP
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Query: 530 VEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVES 589
+E + GA GSC LH + L ++AA ++ ++P S Y ++N+Y+ ++W +V
Sbjct: 471 MEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVAR 530
Query: 590 ARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHP-KALEMYATLKMLHV 639
RK + D+ K PG SWIEV ++ F++ D P ++ ++Y TL + V
Sbjct: 531 VRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGV 581
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 171/374 (45%), Gaps = 8/374 (2%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
Q HAH++KFG ++N ++S Y + A +LFD ++VV+W MI G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFV--- 180
Query: 138 NENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG-FDL 196
+ SA + YF M V + +T ++ + + ++ G +H ++ G
Sbjct: 181 --RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC 238
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D F+G +LVD+Y KC ++A++ F +P R++V +I+ Y + ++ +F +
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+E T SS+LS C + G+ H +++ + + + + LI++Y K +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
+A VF+ + +NV W +I G +G + L ML SP+E+T + +S C
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 377 YASAITETLQTH-AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTW 434
+ + E + ++ + + + ++ + + G + A R+ EP V W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 435 TSLIHAYAFHGQAE 448
+L + H E
Sbjct: 479 GALFGSCLLHKDYE 492
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 21/304 (6%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGF--CHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
+ LK + K + G+ +H ++ G C V + + ++ +Y KC +DA K+FDE+P
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF-IGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 120 GRNVVSWNIMIRG-VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN 178
RNVV+W +I G V R + + F+ ML V P+ T + ++ +C
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKG------MLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 179 IGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISC 238
+ G ++HCY +K +++ G L+DLY KCG +E A F + +++ MI+
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDS 297
+A + +AF +F + + +E TF ++LS C + G +L S+ R +
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNV-VAWNTIIVGC--------GNYGDGSE 348
+ +++++ + + +A+ + + M + V W + C G Y S
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYA-ASR 500
Query: 349 VLKL 352
V+KL
Sbjct: 501 VIKL 504
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 307/633 (48%), Gaps = 48/633 (7%)
Query: 42 VSVPDQTLFRDPD--TVHLFCANALKVSAKRAFLPEGKQLHAHLIKFG-FCHVLSLQNQI 98
+S+P F +P+ T + + + + + L + KQ H H+I+ G F S
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLF 69
Query: 99 LSVYLKC-KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAP---LCVSYFKRM 154
L +E A K+FDE+P N +WN +IR A S P L + F M
Sbjct: 70 AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA--------SGPDPVLSIWAFLDM 121
Query: 155 LLE-KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
+ E + P+ TF LI + + ++ +G LH VK D FV +L+ Y CG
Sbjct: 122 VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV 273
+++A + F + +D+V N MI+ + P++A +F + + T +LS
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD---------- 323
C + + G+ S I + ++ +A+A+++MY K +I DA+ +FD
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 324 ---------------------EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGF 361
M +++VAWN +I G +E L + ++ L++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
+++T+ ST+S C A+ H+ K + V ++LI YSKCG++ + +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL 481
F E+ D+ W+++I A HG +A +MF KM V P+ V+F V AC+H GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 482 VTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI 541
V + F+ M S Y IVP+ HY C+VD+LGR G +++A + + +MP+ + GA +
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 542 GSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAK 601
G+CK+HAN+ LAE A +L +EP + +SNIYA W +V RK + G K
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 602 VPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
PGCS IE+ +H F+S D HP + ++Y L
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 256/456 (56%), Gaps = 1/456 (0%)
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G+QLH Y VK G L V L++ Y+K L ++RRAF P + + +ISC+A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
N LP + + D+ S C L DIG+ H L ++ +D+DV V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
S+L++MYAK I AR +FDEM RNVV W+ ++ G G+ E L L ++ L E
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
+ ++ + SS IS+C ++ + Q H +++K SF V +SL+S YSKCG A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL 481
F +L W +++ AYA H +K E+F++M G+ P+ ++FL VL+AC+H GL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 482 VTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI 541
V +G +YF+ M +I P HY LVD+LGR G + EA E++ +MP++ GA +
Sbjct: 334 VDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 542 GSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAK 601
SC +H N LA +AA+K+F + P S + ++SN YA+ + D ARK++ D+G+ K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 602 VPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
G SW+E N+VH+F + ++ H K+ E+Y L L
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 193/398 (48%), Gaps = 6/398 (1%)
Query: 67 SAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSW 126
SA+ +G QLH +++K G + + N +++ Y K + D+ + F++ P ++ +W
Sbjct: 25 SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTW 84
Query: 127 NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
+ +I A + + + + K+M+ + PD SC +G +H
Sbjct: 85 SSIISCFA-----QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH 139
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
C ++K G+D D FVG +LVD+YAKCG + AR+ F +P R++V + M+ YA E
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
EA +F + ++++FSS++SVC ++G+ H L ++ +FDS V S+L+
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDEL 366
++Y+K A VF+E+ ++N+ WN ++ + +V++L + M G P+ +
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RL 425
T + ++ C +A + E + + SL+ + G + AL+ +
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
+P W +L+ + H E A +K+ G V
Sbjct: 380 PIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
++ + V A L G+Q+H IK F + + ++S+Y KC E A ++F+E+P
Sbjct: 221 SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV 280
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+N+ WN M++ A S + FKRM L + P+++TF ++ +C +
Sbjct: 281 KNLGIWNAMLKAYA-----QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
G + + +LVD+ + G ++ A +P
Sbjct: 336 EGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 181/591 (30%), Positives = 314/591 (53%), Gaps = 21/591 (3%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHV--LSLQNQILSVYLKCKEIEDADK 113
V++F A ++ S K+A + + ++K G +V L + + +S+Y + +IE + +
Sbjct: 218 VNVFPAVSISRSIKKANV-----FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 114 LFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSC 173
+FD RN+ WN MI G +ND + + + +++V D VT+ +
Sbjct: 273 VFDSCVERNIEVWNTMI----GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAV 328
Query: 174 VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN 233
+ +G Q H + K +L + +L+ +Y++CG V + F ++ RD+V N
Sbjct: 329 SALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWN 388
Query: 234 VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ 293
MIS + N L +E + ++ G D T ++LLS L +IGK H+ ++RQ
Sbjct: 389 TMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ 448
Query: 294 AFDSDVLVASALINMYAKNENITDARGVFDE--MLIRNVVAWNTIIVGCGNYGDGSEVLK 351
+ + S LI+MY+K+ I ++ +F+ R+ WN++I G G +
Sbjct: 449 GIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFL 507
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
+ R ML + P+ +T++S + C ++ Q H +++ + + VA++L+ YS
Sbjct: 508 VFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYS 567
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
K G I A F T+E + VT+T++I Y HG E+A +F M G+ PD ++F+
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVA 627
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
VLSAC++ GL+ +GL F M VY I P S+HY C+ D+LGR G ++EA+E ++ + E
Sbjct: 628 VLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEE 687
Query: 532 VE-SDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAA----MSNIYASQRDWCD 586
++ G+ +GSCKLH + LAE +E+L + +K N++ +SN+YA ++ W
Sbjct: 688 GNIAELWGSLLGSCKLHGELELAETVSERL--AKFDKGKNFSGYEVLLSNMYAEEQKWKS 745
Query: 587 VESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
V+ R+ + +KG K G S IE+A V+ FVSRD+ HP + E+Y + L
Sbjct: 746 VDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 247/535 (46%), Gaps = 41/535 (7%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED------ADKL 114
++ LK A+ L GK +H HLI+ + N ++++Y+ C D K+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 115 FDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL--- 169
FD + +NVV+WN +I GR+ E F M+ +V P V+F +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAE-------ACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 170 --IGSCVQFHNIGVGIQLHCYTVKVG--FDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
I ++ N+ G+ L K+G + D FV + + +YA+ G +E++RR F +
Sbjct: 224 VSISRSIKKANVFYGLML-----KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 226 CRDLVMCNVMISCYALN-CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
R++ + N MI Y N CL E + DE T+ S L+ ++G+
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
H + + + +++ ++L+ MY++ ++ + GVF M R+VV+WNT+I G
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
E L L+ +M ++GF D +T+++ +S QTHA ++ Q F + +
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNS 457
Query: 405 SLISAYSKCGNITSALKCFRLT--EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGV 462
LI YSK G I + K F + E D TW S+I Y +G EK +F KML +
Sbjct: 458 YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Query: 463 VPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
P+ V+ +L AC+ G V G LH F++ + Q V + + LVD+ + G I
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA---SALVDMYSKAGAIKY 574
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMS 575
A ++ S E S T I H G+ E A LF+ E + A++
Sbjct: 575 AEDMF-SQTKERNSVTYTTMILGYGQH---GMGERAI-SLFLSMQESGIKPDAIT 624
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 194/429 (45%), Gaps = 38/429 (8%)
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVP----DYVTF 166
A +LFD +P V WN +I G + +++ + ++ RM +K P D T+
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEA-----LLFYSRM--KKTAPFTNCDAYTY 110
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN------ARRA 220
+ + +C + N+ G +HC+ ++ + V +L+++Y C + R+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 221 FCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
F + +++V N +IS Y EA F ++ +F ++
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 281 DIGKLAHSLILR--QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIV 338
+ + L+L+ + D+ V S+ I+MYA+ +I +R VFD + RN+ WNT+I
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI- 289
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT------HAIAV 392
G Y +++ + ++ E E+ +S ++ ASA++ Q H
Sbjct: 290 --GVYVQNDCLVESI-ELFLEAIGSKEI-VSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 393 KLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
K +F+E + + NSL+ YS+CG++ + F E D+V+W ++I A+ +G ++
Sbjct: 346 K-NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHC--GLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
+ +M G D ++ +LSA ++ + K H F + Q + + L+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF----LIRQGIQFEGMNSYLI 460
Query: 510 DLLGRYGLI 518
D+ + GLI
Sbjct: 461 DMYSKSGLI 469
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 12/323 (3%)
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG--ANGDEFTFSSLLSVC 274
AR+ F A+P V+ N +I + N LP EA ++ ++ N D +T+SS L C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITD------ARGVFDEMLIR 328
+ GK H ++R +S +V ++L+NMY N D R VFD M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
NVVAWNT+I G +E + M+R P ++ + + +I + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 389 AIAVKLS--FQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
+ +KL + + L V +S IS Y++ G+I S+ + F E ++ W ++I Y +
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 447 AEKATEMF-EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY 505
++ E+F E + S +V D V++L SA + V G + ++ ++ +P
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 506 TCLVDLLGRYGLIDEAFELLRSM 528
+ +V + R G + ++F + SM
Sbjct: 358 SLMV-MYSRCGSVHKSFGVFLSM 379
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 308/593 (51%), Gaps = 25/593 (4%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCH-VLSLQNQILSVYLKCKEIEDADKLFDEL 118
C L+ A+R G+Q+H +++ GF ++++Y KC + A +F
Sbjct: 63 CIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG- 121
Query: 119 PGRNVVSWNIMIRGVAGRDNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLI--GSCVQ 175
R+V +N +I G + +PL + ++ M ++PD TF L+ ++
Sbjct: 122 SERDVFGYNALISGFVV------NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME 175
Query: 176 FHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD-LVMCNV 234
++ ++H K+GFD DC+VG LV Y+K VE+A++ F +P RD V+ N
Sbjct: 176 LSDVK---KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNA 232
Query: 235 MISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA 294
+++ Y+ E+A +F+ +R +G T +S+LS D G+ H L ++
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLR 354
SD++V++ALI+MY K++ + +A +F+ M R++ WN+++ GD L L
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFE 352
Query: 355 DMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV------KLSFQEFLSVANSLIS 408
ML G PD +T+++ + CG +++ + + H + + S EF + NSL+
Sbjct: 353 RMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF--IHNSLMD 410
Query: 409 AYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
Y KCG++ A F D +W +I+ Y E A +MF M GV PD ++
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
F+G+L AC+H G + +G ++ M +VY I+P SDHY C++D+LGR ++EA+EL S
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISK 530
Query: 529 PVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVE 588
P+ + + SC+LH N LA A ++L +EPE Y MSN+Y + +V
Sbjct: 531 PICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVL 590
Query: 589 SARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHP--KALEMYATLKMLHV 639
R + + K PGCSWI + N VH+F + ++THP K++ + +L + H+
Sbjct: 591 DVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 286/535 (53%), Gaps = 10/535 (1%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDN 138
+H + I GFC L L++ ++ +YLK +++ A KLFD + R+VVSW MI +
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFS---- 89
Query: 139 ENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC 198
P + FK M E V + T+ ++ SC + G+Q+H K +
Sbjct: 90 -RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 199 FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
V AL+ LYA+CG +E AR F ++ RDLV N MI Y N + +FS+F L+ +
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTE 208
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
G D FTF SLL ++ +I H L ++ F + +L+N Y K ++ +A
Sbjct: 209 GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA 268
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGD-GSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
+ + R++++ +I G + S+ + +DM+R DE+ +SS + +C
Sbjct: 269 WKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTT 328
Query: 378 ASAITETLQTHAIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
+++T Q H A+K S F +++ NSLI Y+K G I A+ F +E D+ +WTS
Sbjct: 329 IASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS 388
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
LI Y HG EKA +++ +M + P+ V+FL +LSAC+H G G ++ M + +
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP--VEVESDTLGAFIGSCKLHANIGLAE 554
I +H +C++D+L R G ++EA+ L+RS V + S T GAF+ +C+ H N+ L++
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSK 508
Query: 555 WAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD-AKVPGCSWI 608
AA +L +EP K VNY ++++YA+ W + + RK++ + G K PG S +
Sbjct: 509 VAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 212/435 (48%), Gaps = 30/435 (6%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L EG Q+H + K L +++ +LS+Y +C ++E+A FD + R++VSWN MI G
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
++ A S F+ ML E PD TF L+ + + + + +LH +K+
Sbjct: 189 YTA-----NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKL 243
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL--NCLPEEAFS 250
GF + +LV+ Y KCG + NA + RDL+ C +I+ ++ NC +AF
Sbjct: 244 GFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC-TSDAFD 302
Query: 251 MF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVASALINM 308
+F +++RM DE SS+L +C T+ IG+ H L+ + DV + ++LI+M
Sbjct: 303 IFKDMIRMK-TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
YAK+ I DA F+EM ++V +W ++I G G +G+ + + L M E P+++T
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTF 421
Query: 369 SSTISLCGYAS------AITETL-QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
S +S C + I +T+ H I + +E LS +I ++ G + A
Sbjct: 422 LSLLSACSHTGQTELGWKIYDTMINKHGIEAR---EEHLSC---IIDMLARSGYLEEAYA 475
Query: 422 CFRLTE---EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR-VSFLGVLSACA 477
R E TW + + A HG + + ++LS + P + V+++ + S A
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLS--MEPRKPVNYINLASVYA 533
Query: 478 HCGLVTKGLHYFNLM 492
G L+ LM
Sbjct: 534 ANGAWDNALNTRKLM 548
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 268/485 (55%), Gaps = 4/485 (0%)
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
++ L+ +C+ + G ++H + +K + ++ L+ Y KC +E+AR+ +P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
+++V MIS Y+ EA ++F ++R DG +EFTF+++L+ C +GK
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGK 173
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
H LI++ +DS + V S+L++MYAK I +AR +F+ + R+VV+ II G G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
E L++ + EG SP+ +T +S ++ + + Q H ++ + + N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML-SCGVV 463
SLI YSKCGN++ A + F E ++W +++ Y+ HG + E+F M V
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTS-VYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
PD V+ L VLS C+H + GL+ F+ M + Y P ++HY C+VD+LGR G IDEAF
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 523 ELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQR 582
E ++ MP + + LG+ +G+C++H ++ + E +L IEPE + NY +SN+YAS
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
Query: 583 DWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVCLD 642
W DV + R M+ K K PG SWI+ +H F + D+THP+ E+ A +K + + +
Sbjct: 474 RWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMK 533
Query: 643 TSCWL 647
+ ++
Sbjct: 534 QAGYV 538
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 179/311 (57%), Gaps = 7/311 (2%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNI 128
KRA L +G+++HAH+IK + L+ ++L Y KC +EDA K+ DE+P +NVVSW
Sbjct: 65 KRA-LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
MI + SS L V F M+ P+ TF ++ SC++ +G+G Q+H
Sbjct: 124 MISRYS---QTGHSSEALTV--FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 189 TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
VK +D FVG +L+D+YAK G ++ AR F +P RD+V C +I+ YA L EEA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM 308
MF+ L +G + + T++SLL+ L D GK AH +LR+ ++ ++LI+M
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELT 367
Y+K N++ AR +FD M R ++WN ++VG +G G EVL+L R M E PD +T
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 368 ISSTISLCGYA 378
+ + +S C +
Sbjct: 359 LLAVLSGCSHG 369
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA- 134
GKQ+H ++K+ + + + + +L +Y K +I++A ++F+ LP R+VVS +I G A
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 135 -GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
G D E + F R+ E + P+YVT+ L+ + + G Q HC+ ++
Sbjct: 232 LGLDEE-------ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
+ +L+D+Y+KCG + ARR F +P R + N M+ Y+ + L E +F
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 254 LLRMDG-ANGDEFTFSSLLSVCDTLEYYDIG 283
L+R + D T ++LS C D G
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A+ L + A L GKQ H H+++ LQN ++ +Y KC + A +LFD +P
Sbjct: 258 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE 317
Query: 121 RNVVSWNIMIRGVA----GRDNENDSSAPLCVSYFKRMLLEK-VVPDYVTFNGLIGSCVQ 175
R +SWN M+ G + GR+ + F+ M EK V PD VT ++ C
Sbjct: 318 RTAISWNAMLVGYSKHGLGRE---------VLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 176 FH------NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
NI G+ Y K G + GC +VD+ + G ++ A +P +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTE---HYGC-IVDMLGRAGRIDEAFEFIKRMPSK 422
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 286/537 (53%), Gaps = 13/537 (2%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLF---DELPGRNVVSWNIMIR 131
E Q+HA + K GF S+ ++S+Y K +I+ ++++F D++ +N+V N+MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
+ + + F RML E + D + L+ + +G Q+H YT+K
Sbjct: 427 SFSQSKKPGKA-----IRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
G LD VG +L LY+KCG +E + + F +P +D MIS + EA +
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
F+ + DG + DE T +++L+VC + GK H LR D + + SAL+NMY+K
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
++ AR V+D + + V+ +++I G +G + L RDM+ GF+ D ISS
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
+ + + Q HA K+ SV +SL++ YSK G+I K F PDL
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
+ WT+LI +YA HG+A +A +++ M G PD+V+F+GVLSAC+H GLV + + N
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
M Y I P++ HY C+VD LGR G + EA + +M ++ ++ G + +CK+H +
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 552 LAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWI 608
L + AA+K +EP + Y ++SNI A +W +VE RK++ G K PG S +
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 225/460 (48%), Gaps = 18/460 (3%)
Query: 77 KQLHAHLIK-FGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
K L AHL++ + + L +LS Y + DA KLFD +P +VVS NIMI G
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+S + +F +M + +++ +I +C + C+T+K+G+
Sbjct: 128 HRLFEES-----LRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
V AL+D+++K E+A + F ++ N +I+ N F +F+ +
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+ D +T+SS+L+ C +LE GK+ + +++ + DV V +A++++YAK ++
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
+A VF + +VV+W ++ G D L++ ++M G + T++S IS C
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
G S + E Q HA K F SVA +LIS YSK G+I + + F E+ D +
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF---EDLDDIQRQ 418
Query: 436 SLIH----AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
++++ +++ + KA +F +ML G+ D S +LS C + K +H + L
Sbjct: 419 NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DCLNLGKQVHGYTL 477
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+ +V D + L L + G ++E+++L + +P +
Sbjct: 478 KSG---LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 140/299 (46%), Gaps = 17/299 (5%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD L A L V + LP GK++H + ++ G + L + ++++Y KC ++ A
Sbjct: 549 PDESTL--AAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+++D LP + VS + +I G + D F+ M++ D + ++ +
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQHGLIQDG-----FLLFRDMVMSGFTMDSFAISSILKA 661
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
+G Q+H Y K+G + VG +L+ +Y+K G +++ +AF + DL+
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD-----TLEYYDIGKLAH 287
+I+ YA + EA ++NL++ G D+ TF +LS C Y+ + +
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHL----N 777
Query: 288 SLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
S++ + + +++ ++ + +A + M I+ + + W T++ C +G+
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGE 836
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 267/488 (54%), Gaps = 6/488 (1%)
Query: 153 RMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCG 212
R+L ++ P T+ LI C ++ +++H + + G D D F+ L+ +Y+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
V+ AR+ F R + + N + L EE ++ + G D FT++ +L
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 273 VCD----TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
C T+ + GK H+ + R+ + S V + + L++MYA+ + A VF M +R
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE--GFSPDELTISSTISLCGYASAITETLQ 386
NVV+W+ +I G E L+ R+M+RE SP+ +T+ S + C +A+ +
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
H ++ L V ++L++ Y +CG + + F + D+V+W SLI +Y HG
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYT 506
+KA ++FE+ML+ G P V+F+ VL AC+H GLV +G F M + I P +HY
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 507 CLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPE 566
C+VDLLGR +DEA ++++ M E G+ +GSC++H N+ LAE A+ +LF +EP+
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 567 KSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
+ NY +++IYA + W +V+ +K++ +G K+PG W+EV +++SFVS D+ +P
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPL 546
Query: 627 ALEMYATL 634
+++A L
Sbjct: 547 MEQIHAFL 554
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 35/409 (8%)
Query: 70 RAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
R+ L + ++H H++ G L +++ +Y ++ A K+FD+ R + WN +
Sbjct: 90 RSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 130 IRG--VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCV----QFHNIGVGI 183
R +AG E + + +M V D T+ ++ +CV +++ G
Sbjct: 150 FRALTLAGHGEE-------VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
++H + + G+ ++ LVD+YA+ G V+ A F +P R++V + MI+CYA N
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 244 LPEEAFSMFN--LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
EA F + ++ + T S+L C +L + GKL H ILR+ DS + V
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
SAL+ MY + + + VFD M R+VV+WN++I G +G G + +++ +ML G
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382
Query: 362 SPDELTISSTISLCGYASAITE-------TLQTHAIAVKLS----FQEFLSVANSLISAY 410
SP +T S + C + + E + H I ++ + L AN L A
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
++ + EP W SL+ + HG E A ++ +
Sbjct: 443 KMVQDMRT---------EPGPKVWGSLLGSCRIHGNVELAERASRRLFA 482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
LK +L + SP + T I CG+ S++++ L+ H + + +A LI
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
YS G++ A K F T + + W +L A G E+ ++ KM GV DR ++
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH---YTCLVDLLGRYGLIDEAFELLR 526
VL AC L + + S H T LVD+ R+G +D A +
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 527 SMPVE 531
MPV
Sbjct: 242 GMPVR 246
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
LR + +T P++V + + L+ A A L +GK +H ++++ G +L + +
Sbjct: 268 LRTFREMMRETKDSSPNSVTM--VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR--GVAGRDNENDSSAPLCVSYFKRML 155
++++Y +C ++E ++FD + R+VVSWN +I GV G + + F+ ML
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK-------AIQIFEEML 378
Query: 156 LEKVVPDYVTFNGLIGSC 173
P VTF ++G+C
Sbjct: 379 ANGASPTPVTFVSVLGAC 396
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 300/597 (50%), Gaps = 43/597 (7%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLK--CKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
KQLH+ I G + Q ++ + + A KLF ++P +VV WN MI+G +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IGVGIQLHCYTVKVG 193
D + + V + ML E V PD TF L+ + + G +LHC+ VK G
Sbjct: 111 KVDCDGEG-----VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFG 165
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
+ +V ALV +Y+ CGL++ AR F D+ N+MIS Y EE+ +
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL------------------------ 289
+ + + T +LS C ++ D+ K H
Sbjct: 226 EMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 290 -------ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
I R DV+ ++++ Y + N+ AR FD+M +R+ ++W +I G
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLR 345
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA--ITETLQTHAIAVKLSFQEFL 400
G +E L++ R+M G PDE T+ S ++ C + + I E ++T+ K+ + +
Sbjct: 346 AGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI--KNDV 403
Query: 401 SVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC 460
V N+LI Y KCG A K F ++ D TWT+++ A +GQ ++A ++F +M
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
+ PD +++LGVLSAC H G+V + +F M S ++I P HY C+VD+LGR GL+ E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYAS 580
A+E+LR MP+ S GA +G+ +LH + +AE AA+K+ +EP+ YA + NIYA
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAG 583
Query: 581 QRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
+ W D+ R+ I D K PG S IEV H FV+ DK+H ++ E+Y L+ L
Sbjct: 584 CKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEEL 640
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 195/455 (42%), Gaps = 43/455 (9%)
Query: 53 PDT-VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
PD+ F N LK L GK+LH H++KFG L +QN ++ +Y C ++ A
Sbjct: 132 PDSHTFPFLLNGLKRDG--GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA 189
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+FD +V SWN+MI G R E + S L V + + V P VT ++
Sbjct: 190 RGVFDRRCKEDVFSWNLMISGY-NRMKEYEESIELLVEMERNL----VSPTSVTLLLVLS 244
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC-------------------- 211
+C + + + ++H Y + + + ALV+ YA C
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 212 ------GLVEN-----ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA 260
G VE AR F +P RD + +MI Y E+ +F ++ G
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
DEFT S+L+ C L +IG+ + I + +DV+V +ALI+MY K A+
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
VF +M R+ W ++VG N G G E +K+ M PD++T +S C ++
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 381 ITETLQTHA-IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLI 438
+ + + A + + L ++ + G + A + R + P+ + W +L+
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVL 473
A H A +K+L + PD + +L
Sbjct: 545 GASRLHNDEPMAELAAKKILE--LEPDNGAVYALL 577
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 286/556 (51%), Gaps = 16/556 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP--GR 121
L + ++ L +Q+HA +I GF + L + + + Y++ ++ A F+ +P R
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVS----YFKRMLLEKVVPDYVTFNGLIGSCVQFH 177
N SWN ++ G + S C S + RM D I +CV
Sbjct: 71 NRHSWNTILSGYS-------KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
+ GI +H +K G D D +V +LV++YA+ G +E+A++ F +P R+ V+ V++
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMK 183
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF-- 295
Y E F +F L+R G D T L+ C + +GK H + +R++F
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRD 355
SD L AS +I+MY K + +AR +F+ + RNVV W T+I G E L R
Sbjct: 244 QSDYLQAS-IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 356 MLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGN 415
MLRE P++ T+++ + C ++ H ++ + S I Y++CGN
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
I A F + E ++++W+S+I+A+ +G E+A + F KM S VVP+ V+F+ +LSA
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD 535
C+H G V +G F MT Y +VP+ +HY C+VDLLGR G I EA + +MPV+ +
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 536 TLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIG 595
GA + +C++H + LA AEKL +EPEKS Y +SNIYA W V R+ +G
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 596 DKGDAKVPGCSWIEVA 611
KG K G S EV
Sbjct: 543 IKGYRKHVGQSATEVG 558
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 302/579 (52%), Gaps = 15/579 (2%)
Query: 68 AKRAFLPEGKQLHAHLIKFGFCH-VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSW 126
A+ L +G+++H H+I G ++ + N ++++Y KC I DA ++F + ++ VSW
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 127 NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
N MI G+ + + V +K M ++P T + SC +G Q+H
Sbjct: 384 NSMITGL-----DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN--CL 244
++K+G DL+ V AL+ LYA+ G + R+ F ++P D V N +I A + L
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
PE N R G + TFSS+LS +L + ++GK H L L+ + +A
Sbjct: 499 PEAVVCFLNAQRA-GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 305 LINMYAKNENITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
LI Y K + +F M R+ V WN++I G + ++ L L+ ML+ G
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D ++ +S + + ++ HA +V+ + + V ++L+ YSKCG + AL+ F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM-LSCGVVPDRVSFLGVLSACAHCGLV 482
+ +W S+I YA HGQ E+A ++FE M L PD V+F+GVLSAC+H GL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 483 TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIG 542
+G +F M+ Y + P +H++C+ D+LGR G +D+ + + MP++ +G
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 543 SCKLHANIGLAEW---AAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD 599
+C AN AE AAE LF +EPE +VNY + N+YA+ W D+ ARK + D
Sbjct: 798 AC-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADV 856
Query: 600 AKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
K G SW+ + + VH FV+ DK+HP A +Y LK L+
Sbjct: 857 KKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 226/464 (48%), Gaps = 22/464 (4%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDN 138
H+ L K + L N +++ YL+ + A K+FDE+P RN VSW ++ G + R+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS-RNG 81
Query: 139 ENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV--GIQLHCYTVKVGFDL 196
E+ + + + + M+ E + + F ++ +C + ++G+ G Q+H K+ + +
Sbjct: 82 EHKEA----LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 197 DCFVGCALVDLYAKC-GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D V L+ +Y KC G V A AF + ++ V N +IS Y+ AF +F+ +
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL--ILRQAFDSDVLVASALINMYAKNE 313
+ DG+ E+TF SL++ +L D+ L + I + +D+ V S L++ +AK+
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTISSTI 372
+++ AR VF++M RN V N ++VG G E KL DM SP+ I +
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS- 316
Query: 373 SLCGYASA----ITETLQTHAIAVKLSFQEFL-SVANSLISAYSKCGNITSALKCFRLTE 427
S Y+ A + + + H + +F+ + N L++ Y+KCG+I A + F
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG-- 485
+ D V+W S+I +G +A E ++ M ++P + + LS+CA G
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 486 LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+H +L + V S+ L+ L G ++E ++ SMP
Sbjct: 437 IHGESLKLGIDLNVSVSN---ALMTLYAETGYLNECRKIFSSMP 477
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 213/467 (45%), Gaps = 23/467 (4%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA-- 134
+Q+ + K G L + + ++S + K + A K+F+++ RN V+ N ++ G+
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 135 --GRDNEN---DSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYT 189
G + D ++ + VS ++L P+Y S + + G ++H +
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY--------SLAEEVGLKKGREVHGHV 339
Query: 190 VKVGF-DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
+ G D +G LV++YAKCG + +ARR F + +D V N MI+ N EA
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM 308
+ +R FT S LS C +L++ +G+ H L+ D +V V++AL+ +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDG-SEVLKLLRDMLREGFSPDELT 367
YA+ + + R +F M + V+WN+II E + + R G + +T
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLT 426
SS +S S Q H +A+K + + + N+LI+ Y KCG + K F R+
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
E D VTW S+I Y + KA ++ ML G D + VLSA A + +G+
Sbjct: 580 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 639
Query: 487 HYFNLMTSVYQIVPDSDHY--TCLVDLLGRYGLIDEAFELLRSMPVE 531
+ + +SD + LVD+ + G +D A +MPV
Sbjct: 640 E---VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 171/379 (45%), Gaps = 21/379 (5%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKC-KEIEDADKLFDELPGRNVVSWNIMIRGVA 134
G+Q+H + K + + N ++S+Y KC + A F ++ +N VSWN +I V
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII-SVY 181
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI--QLHCYTVKV 192
+ + S+ + F M + P TF L+ + V + Q+ C K
Sbjct: 182 SQAGDQRSAFRI----FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS 237
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
G D FVG LV +AK G + AR+ F + R+ V N ++ EEA +F
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDI--------GKLAHSLILRQAF-DSDVLVAS 303
MD + + + S + + + Y + G+ H ++ D V + +
Sbjct: 298 ----MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
L+NMYAK +I DAR VF M ++ V+WN++I G G E ++ + M R P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
T+ S++S C Q H ++KL +SV+N+L++ Y++ G + K F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 424 RLTEEPDLVTWTSLIHAYA 442
E D V+W S+I A A
Sbjct: 474 SSMPEHDQVSWNSIIGALA 492
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 299/545 (54%), Gaps = 25/545 (4%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDE--LPGRNVVSWNIMIRGV 133
GKQ+H+ +IK GF S+ N ++++Y C+ + DA +F+E + R+ V++N++I G+
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
AG + L V F++ML + P +TF ++GSC +G Q+H +K G
Sbjct: 268 AGFKRDE----SLLV--FRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTG 318
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
++ V A + +Y+ A + F ++ +DLV N MIS Y L + A S++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
+ + G DEFTF SLL+ L D+ ++ + I++ S + +++ALI+ Y+KN
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK----LLRDMLREGFSPDELTIS 369
I A +F+ L +N+++WN II G + G E L+ LL +R PD T+S
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR--ILPDAYTLS 493
Query: 370 STISLCGYASAITETLQTHAIAVKL-SFQEFLSVANSLISAYSKCGNITSALKCFRLTEE 428
+ +S+C S++ QTHA ++ F+E L + N+LI+ YS+CG I ++L+ F E
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNALINMYSQCGTIQNSLEVFNQMSE 552
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG-VVPDRVSFLGVLSACAHCGLVTKGLH 487
D+V+W SLI AY+ HG+ E A ++ M G V+PD +F VLSAC+H GLV +GL
Sbjct: 553 KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLE 612
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVES--DTLGAFIGSCK 545
FN M + ++ + DH++CLVDLLGR G +DEA L++ + S D A +C
Sbjct: 613 IFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA 672
Query: 546 LHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGC 605
H ++ L + A+ L E + Y +SNIYA W + E R+ I G K GC
Sbjct: 673 AHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGC 732
Query: 606 SWIEV 610
SW+ +
Sbjct: 733 SWMRL 737
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 279 YYDIGKLAHSLILRQAFDS----DVLVASALINMYAKNENITDARGVFDEMLIRNVVA-W 333
Y +G LA L++ FD DV + L++ K +I A VFD+M R+ VA W
Sbjct: 102 YERLGNLAS---LKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIW 158
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
N +I GC G ++L R+M + G D+ ++ +S+C Y S + Q H++ +K
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVIK 217
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP--DLVTWTSLIHAYAFHGQAEKAT 451
F SV N+LI+ Y C + A F T+ D VT+ +I A + E
Sbjct: 218 AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL 277
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDL 511
+F KML + P ++F+ V+ +C+ C + +H + T + S+ +
Sbjct: 278 -VFRKMLEASLRPTDLTFVSVMGSCS-CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS 335
Query: 512 LGRYGLIDEAFELLR 526
+G + FE L
Sbjct: 336 FEDFGAAHKVFESLE 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 33/181 (18%)
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPDELTISSTISLCGYASAITETLQTHAIAV 392
N + G G+ LKL D+ R PD+ ++S I+ + Q H A+
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 393 KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA--------YAFH 444
+ V+N+L+S Y + GN+ S K F +EPD+ +WT+L+ A YAF
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 445 ------------------------GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
G E + E+F +M GV D+ F +LS C +
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 481 L 481
L
Sbjct: 205 L 205
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD L + L + + L G Q HA++++ G + N ++++Y +C I+++
Sbjct: 487 PDAYTL--STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE-KVVPDYVTFNGLIG 171
++F+++ ++VVSWN +I + R E +++ V+ +K M E KV+PD TF+ ++
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYS-RHGEGENA----VNTYKTMQDEGKVIPDAATFSAVLS 599
Query: 172 SCVQFHNIGVGIQLHCYTVK---VGFDLDCFVGCALVDLYAKCGLVENAR 218
+C + G+++ V+ V ++D F LVDL + G ++ A
Sbjct: 600 ACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF--SCLVDLLGRAGHLDEAE 647
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 273/532 (51%), Gaps = 52/532 (9%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N+I++ ++ +I+ A ++F + +N ++WN ++ G+ S P + ++
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGI--------SKDPSRMMEAHQLF 116
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
E PD ++N I L CY V F E
Sbjct: 117 DEIPEPDTFSYN---------------IMLSCYVRNVNF--------------------E 141
Query: 216 NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD 275
A+ F +P +D N MI+ YA E+A +F + +E ++++++S
Sbjct: 142 KAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMIS--G 195
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI-RNVVAWN 334
+E D+ K +H + A V+ +A+I Y K + + A +F +M + +N+V WN
Sbjct: 196 YIECGDLEKASH--FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+I G + LKL R ML EG P+ +SS + C SA+ Q H I K
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
+ ++ SLIS Y KCG + A K F + ++ D+V W ++I YA HG A+KA +F
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 455 EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGR 514
+M+ + PD ++F+ VL AC H GLV G+ YF M Y++ P DHYTC+VDLLGR
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 515 YGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAM 574
G ++EA +L+RSMP + G +G+C++H N+ LAE+AAEKL + + + Y +
Sbjct: 434 AGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQL 493
Query: 575 SNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
+NIYAS+ W DV RK + + KVPG SWIE+ N+VH F S D+ HP+
Sbjct: 494 ANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 12/192 (6%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q+H + K C+ ++ ++S+Y KC E+ DA KLF+ + ++VV+WN MI G A
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV---KV 192
N + + LC+ F+ M+ K+ PD++TF ++ +C + +G+ V KV
Sbjct: 363 HGNADKA---LCL--FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV 417
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD--LVMCNVMISCYALNCLPEEAFS 250
D + +VDL + G +E A + ++P R V ++ +C + F+
Sbjct: 418 EPQPDHYT--CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 251 MFNLLRMDGANG 262
LL+++ N
Sbjct: 476 AEKLLQLNSQNA 487
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 281/548 (51%), Gaps = 44/548 (8%)
Query: 93 SLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFK 152
SL +++ Y K++ A K+FDE+P RNV+ N+MIR N+ V F
Sbjct: 75 SLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYV-----NNGFYGEGVKVFG 129
Query: 153 RMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCG 212
M V PD+ TF ++ +C I +G ++H KVG FVG LV +Y KCG
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
+ AR + RD+V N ++ YA N R D A L
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQN------------QRFDDA----------LE 227
Query: 273 VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA 332
VC +E K++H D+ + + EN+ + +F +M +++V+
Sbjct: 228 VCREMESV---KISH--------DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVS 276
Query: 333 WNTIIVGCGNYGDGS---EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
WN +I G Y + E ++L M +GF PD ++I+S + CG SA++ + H
Sbjct: 277 WNVMI---GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
+ L + N+LI Y+KCG + A F + D+V+WT++I AY F G+
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A +F K+ G+VPD ++F+ L+AC+H GL+ +G F LMT Y+I P +H C+V
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
DLLGR G + EA+ ++ M +E GA +G+C++H++ + AA+KLF + PE+S
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
Y +SNIYA W +V + R ++ KG K PG S +EV +H+F+ D++HP++ E
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDE 573
Query: 630 MYATLKML 637
+Y L +L
Sbjct: 574 IYRELDVL 581
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 24/260 (9%)
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKL--AHSLILRQAFDSDVLVASALINMYAKN 312
L +D + E F L V DT Y DI L HS I+ + + + L+ YA
Sbjct: 31 LELDQKSPQETVFL-LGQVLDT--YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 313 ENITDARGVFDEMLIRNVVAWNTII---VGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
+++ AR VFDE+ RNV+ N +I V G YG+G +K+ M PD T
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG---VKVFGTMCGCNVRPDHYTFP 144
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
+ C + I + H A K+ L V N L+S Y KCG ++ A
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC---------- 479
D+V+W SL+ YA + + + A E+ +M S + D + +L A ++
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 480 ---GLVTKGLHYFNLMTSVY 496
+ K L +N+M VY
Sbjct: 265 MFFKMGKKSLVSWNVMIGVY 284
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD V + + L + L GK++H ++ + L L+N ++ +Y KC +E A
Sbjct: 306 EPDAVSI--TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 112 DKLFDELPGRNVVSWNIMIR--GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
+F+ + R+VVSW MI G +GR + V+ F ++ +VPD + F
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCD-------AVALFSKLQDSGLVPDSIAFVTT 416
Query: 170 IGSCVQFHNIGVG---IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC 226
+ +C + G +L K+ L+ + C +VDL + G V+ A R
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLE-HLAC-MVDLLGRAGKVKEAYRFI----- 469
Query: 227 RDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA 286
+D+ M +E + +LL C DIG LA
Sbjct: 470 QDMSM-----------------------------EPNERVWGALLGACRVHSDTDIGLLA 500
Query: 287 HSLILRQAFDSDVLVASALINMYAKN---ENITDARGVF-DEMLIRNVVAWN-------- 334
+ + A + L N+YAK E +T+ R + + L +N A N
Sbjct: 501 ADKLFQLAPEQSGYYV-LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 335 TIIVGCGNYGDGSEVLK----LLRDMLREGFSPD 364
T +VG ++ E+ + L++ M G+ PD
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD 593
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 288/561 (51%), Gaps = 5/561 (0%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDN 138
LH+ ++K G+ + +++ Y C ++ A +F+ + +++V W ++
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 139 ENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC 198
DS + M + +P+ TF+ + + + +H +K + LD
Sbjct: 228 FEDS-----LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 199 FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
VG L+ LY + G + +A + F +P D+V + MI+ + N EA +F +R
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
+EFT SS+L+ C + +G+ H L+++ FD D+ V++ALI++YAK E + A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA 378
+F E+ +N V+WNT+IVG N G+G + + R+ LR S E+T SS + C
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 379 SAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLI 438
+++ +Q H +A+K + + ++V+NSLI Y+KCG+I A F E D+ +W +LI
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
Y+ HG +A + + M P+ ++FLGVLS C++ GL+ +G F M + I
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
P +HYTC+V LLGR G +D+A +L+ +P E A + + N A +AE
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642
Query: 559 KLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFV 618
++ I P+ Y +SN+YA + W +V S RK + + G K PG SWIE VH F
Sbjct: 643 EILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS 702
Query: 619 SRDKTHPKALEMYATLKMLHV 639
HP + L+ L++
Sbjct: 703 VGLSDHPDMKLINGMLEWLNM 723
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 238/493 (48%), Gaps = 24/493 (4%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
K +H ++K G C L N +L+ Y+K +DA LFDE+P RN VS+ + +G A +
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ 128
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
D + + R+ E + F + V + LH VK+G+D
Sbjct: 129 DP---------IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
+ FVG AL++ Y+ CG V++AR F + C+D+V+ ++SCY N E++ + + +R
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
M G + +TF + L L +D K H IL+ + D V L+ +Y + +++
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF-SPDELTISSTISLC 375
DA VF+EM +VV W+ +I G +E + L M RE F P+E T+SS ++ C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGC 358
Query: 376 --GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
G S + E Q H + VK+ F + V+N+LI Y+KC + +A+K F + V+
Sbjct: 359 AIGKCSGLGE--QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNL 491
W ++I Y G+ KA MF + L V V+F L ACA + G +H +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
T+ + V S+ L+D+ + G I A + M ++ + A I H G
Sbjct: 477 KTNNAKKVAVSN---SLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH---G 529
Query: 552 LAEWAAEKLFIIE 564
L A L I++
Sbjct: 530 LGRQALRILDIMK 542
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 176/383 (45%), Gaps = 15/383 (3%)
Query: 157 EKVVP--DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
+ ++P D + ++ C+Q ++ +HC +K G LD F L++ Y K G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
++A F +P R+ V + YA ++ +++ L +G + F+S L +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+L+ +I HS I++ +DS+ V +ALIN Y+ ++ AR VF+ +L +++V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
I+ G + LKLL M GF P+ T + + A H +K
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
+ V L+ Y++ G+++ A K F + D+V W+ +I + +G +A ++F
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 455 EKMLSCGVVPDRVSFLGVLSACA--HCGLVTKGLHYFNLMTSVYQIVPDSDHY--TCLVD 510
+M VVP+ + +L+ CA C + + LH V ++ D D Y L+D
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL-----VVKVGFDLDIYVSNALID 391
Query: 511 LLGRYGLIDEAFELLRSMPVEVE 533
+ + +D A +L + + E
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNE 414
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 5/217 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+QLH ++K GF + + N ++ VY KC++++ A KLF EL +N VSWN +I G
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-- 424
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
EN S F+ L +V VTF+ +G+C ++ +G+Q+H +K
Sbjct: 425 ---ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA 481
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
V +L+D+YAKCG ++ A+ F + D+ N +IS Y+ + L +A + +++
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
+ + TF +LS C D G+ ++R
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 311/625 (49%), Gaps = 53/625 (8%)
Query: 47 QTLFRDPD---TVHLFCANALKVSAKRAF------------LPEGKQLHAHLIKFGFCHV 91
+TL R D V LF + +++ +++A+ L +G LH H++ +C+
Sbjct: 34 RTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 92 LS--LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
+ L N ++++Y KC I A ++FD +P RNVVSW +I G NE + C+
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEG---FCL- 149
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
F ML P+ T + ++ SC G Q+H +K+G +V A++ +Y
Sbjct: 150 -FSSML-SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYG 203
Query: 210 KC---GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFT 266
+C A F A+ ++LV N MI+ + L ++A +F + DG D T
Sbjct: 204 RCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT 263
Query: 267 FSSLLSVCDTLEYYDIGKLA-----------HSLILRQAFDSDVLVASALINMYAKN-EN 314
LL++C +L Y L HSL ++ + VA+ALI +Y++ E+
Sbjct: 264 ---LLNICSSL--YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 315 ITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS 373
TD +F EM R++VAWN II Y D + L + +E SPD T SS +
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 374 LCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
C L HA +K F + NSLI AY+KCG++ ++ F + D+V+
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMT 493
W S++ AY+ HGQ + +F+KM + PD +F+ +LSAC+H G V +GL F M
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 494 SVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLA 553
+ +P +HY C++D+L R EA E+++ MP++ ++ A +GSC+ H N L
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 554 EWAAEKLF-IIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
+ AA+KL ++EP S++Y MSNIY ++ + + + K + K P SW E+ N
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGN 614
Query: 613 QVHSFVSRDKTHPKALEMYATLKML 637
+VH F S + P +Y LK L
Sbjct: 615 KVHEFASGGRHRPDKEAVYRELKRL 639
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 290/542 (53%), Gaps = 15/542 (2%)
Query: 107 EIEDADKLFDELPGR-NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
E ++ LF+ + +V SWN +I +A DS+ L F M + P +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLA---RSGDSAEALLA--FSSMRKLSLYPTRSS 78
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
F I +C +I G Q H G+ D FV AL+ +Y+ CG +E+AR+ F +P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF------SSLLSVCDTLEY 279
R++V MI Y LN +A S+F L +D + D+ F S++S C +
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 280 YDIGKLAHSLILRQAFDSDVLVASALINMYAKNE--NITDARGVFDEMLIRNVVAWNTII 337
+ + HS ++++ FD V V + L++ YAK + AR +FD+++ ++ V++N+I+
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 338 VGCGNYGDGSEVLKLLRDMLREGF-SPDELTISSTISLCGYASAITETLQTHAIAVKLSF 396
G +E ++ R +++ + + +T+S+ + ++ A+ H +++
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
++ + V S+I Y KCG + +A K F + ++ +WT++I Y HG A KA E+F
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
M+ GV P+ ++F+ VL+AC+H GL +G +FN M + + P +HY C+VDLLGR G
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 517 LIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSN 576
+ +A++L++ M ++ +S + + +C++H N+ LAE + +LF ++ Y +S+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498
Query: 577 IYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKM 636
IYA W DVE R ++ ++G K PG S +E+ +VH F+ D+ HP+ ++Y L
Sbjct: 499 IYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAE 558
Query: 637 LH 638
L+
Sbjct: 559 LN 560
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 190/386 (49%), Gaps = 16/386 (4%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
GKQ H FG+ + + + ++ +Y C ++EDA K+FDE+P RN+VSW MIRG
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTF------NGLIGSCVQFHNIGVGIQLHCYT 189
N D+ VS FK +L+++ D F +I +C + G+ +H +
Sbjct: 155 NGNALDA-----VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 190 VKVGFDLDCFVGCALVDLYAKCGL--VENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
+K GFD VG L+D YAK G V AR+ F + +D V N ++S YA + + E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 248 AFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
AF +F L++ + T S++L IGK H ++R + DV+V +++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDEL 366
+MY K + AR FD M +NV +W +I G G +G ++ L+L M+ G P+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 367 TISSTISLCGYASAITETLQ-THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-R 424
T S ++ C +A E + +A+ + + L ++ + G + A R
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKA 450
+ +PD + W+SL+ A H E A
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELA 475
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 293/607 (48%), Gaps = 18/607 (2%)
Query: 35 WSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLI---KFGFCHV 91
W +L + V +T F L LKV A ++L G+ +HAHLI +
Sbjct: 14 WDKLASLVPKSKKTPFPIDRLNEL-----LKVCANSSYLRIGESIHAHLIVTNQSSRAED 68
Query: 92 LSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVS 149
N ++++Y+KC+E A KLFD +P RNVVSW M++G +G D E +
Sbjct: 69 AYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFE-------VLK 121
Query: 150 YFKRMLLE-KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLY 208
FK M + P+ + SC I G Q H +K G FV LV +Y
Sbjct: 122 LFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMY 181
Query: 209 AKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
+ C A R +P DL + + +S Y +E + + + T+
Sbjct: 182 SLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYL 241
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
S L + L ++ HS ++R F+++V ALINMY K + A+ VFD+ +
Sbjct: 242 SSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ 301
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
N+ TI+ E L L M + P+E T + ++ S + + H
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
+ +K ++ + V N+L++ Y+K G+I A K F D+VTW ++I + HG
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGR 421
Query: 449 KATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCL 508
+A E F++M+ G +P+R++F+GVL AC+H G V +GLHYFN + + + PD HYTC+
Sbjct: 422 EALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 509 VDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKS 568
V LL + G+ +A + +R+ P+E + + +C + N L + AE P S
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDS 541
Query: 569 VNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKAL 628
Y +SNI+A R+W V R ++ ++G K PG SWI + NQ H F++ D HP+
Sbjct: 542 GVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEIT 601
Query: 629 EMYATLK 635
+YA +K
Sbjct: 602 LIYAKVK 608
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 273/541 (50%), Gaps = 23/541 (4%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L +G +H + ++ G +S+ ++S+Y KC E+E A++LF + R+VVSW+ MI
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 133 V--AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
AG+ +E +S F+ M+ + P+ VT ++ C +G +HCY +
Sbjct: 376 YEQAGQHDE-------AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI 428
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K + + A++ +YAKCG A +AF +P +D V N + Y +AF
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
++ +++ G D T +L C Y G + I++ FDS+ VA ALINM+
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFT 548
Query: 311 KNENITDARGVFDEM-LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
K + + A +FD+ ++ V+WN ++ G +G E + R M E F P+ +T
Sbjct: 549 KCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFV 608
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
+ + SA+ + H+ ++ F V NSL+ Y+KCG I S+ KCF
Sbjct: 609 NIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNK 668
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
+V+W +++ AYA HG A A +F M + PD VSFL VLSAC H GLV +G F
Sbjct: 669 YIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
M ++I + +HY C+VDLLG+ GL EA E++R M V+ GA + S ++H N
Sbjct: 729 EEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCN 788
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ L+ A +L +EP + Y+ R +V + ++ KVP CSWIE
Sbjct: 789 LWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSRI------KKVPACSWIE 835
Query: 610 V 610
V
Sbjct: 836 V 836
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 220/459 (47%), Gaps = 21/459 (4%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV--AG 135
Q+H LI G L NQ+++ Y + + + +FD + VV WN MIRG AG
Sbjct: 23 QVHGSLIVSG----LKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
E + +F M EK + PD +F + +C + G+++H ++G
Sbjct: 79 LHRE-------ALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL 131
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ D ++G ALV++Y K + +AR+ F + +D+V N M+S A N A +F+
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+R + D + +L+ LE D+ + H L++++ F +S LI+MY +
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCAD 249
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ A VF+E+ ++ +W T++ + G EVL+L M +++ +S +
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
Y + + + H AV+ +SVA SL+S YSKCG + A + F E+ D+V+W
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW 369
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL--VTKGLHYFNLM 492
+++I +Y GQ ++A +F M+ + P+ V+ VL CA + K +H + +
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIK 429
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
I + + T ++ + + G A + +P++
Sbjct: 430 A---DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 202/434 (46%), Gaps = 9/434 (2%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
DPD ALK A +G ++H + + G + + ++ +Y K +++ A
Sbjct: 97 DPDKYSF--TFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
++FD++ ++VV+WN M+ G+A SSA L + F M V D+V+ LI
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLA---QNGCSSAALLL--FHDMRSCCVDIDHVSLYNLIP 209
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVM 231
+ + V LH +K GF G L+D+Y C + A F V +D
Sbjct: 210 AVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
M++ YA N EE +F+L+R ++ +S L + G H +
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK 351
+Q DV VA++L++MY+K + A +F + R+VV+W+ +I G E +
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
L RDM+R P+ +T++S + C +A H A+K + L A ++IS Y+
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYA 447
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
KCG + ALK F D V + +L Y G A KA ++++ M GV PD + +G
Sbjct: 448 KCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 472 VLSACAHCGLVTKG 485
+L CA C +G
Sbjct: 508 MLQTCAFCSDYARG 521
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 265/512 (51%), Gaps = 36/512 (7%)
Query: 161 PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRA 220
P T+ LI C Q + G ++H + GF + L+ +YAKCG + +AR+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 221 FCAVPCRDLVMCNVMISCYALNCL-------------------------------PEEAF 249
F +P RDL NVM++ YA L PEEA
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 250 SMFNLL-RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM 308
+++L+ R+ + + FT S ++ ++ GK H I+R DSD ++ S+L++M
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
Y K I +AR +FD+++ ++VV+W ++I E L +++ P+E T
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 369 SSTISLCGYASAITETL--QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
+ ++ C A TE L Q H ++ F + ++SL+ Y+KCGNI SA
Sbjct: 323 AGVLNAC--ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
+PDLV+WTSLI A +GQ ++A + F+ +L G PD V+F+ VLSAC H GLV KGL
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKL 546
+F +T +++ SDHYTCLVDLL R G ++ ++ MP++ + +G C
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 547 HANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
+ NI LAE AA++LF IEPE V Y M+NIYA+ W + RK + + G K PG S
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Query: 607 WIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
W E+ + H F++ D +HP ++ L+ L
Sbjct: 561 WTEIKRKRHVFIAADTSHPMYNQIVEFLRELR 592
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 216/466 (46%), Gaps = 65/466 (13%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
N ++V ++ L EGK++H H+ GF + + N++L +Y KC + DA K+FDE+P R
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 122 NVVSWNIMIRGVA------------GRDNENDSSA--PLCVSYFKRMLLEKVVPDYVTFN 167
++ SWN+M+ G A E DS + + Y K+ E+ + Y
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 168 GLIGSCVQFHNIGV-------------GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
+ S + + G ++H + V+ G D D + +L+D+Y KCG +
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
+ AR F + +D+V MI Y + E FS+F+ L +E+TF+ +L+ C
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
L ++GK H + R FD +S+L++MY K NI A+ V D ++V+W
Sbjct: 330 ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWT 389
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ-------- 386
++I GC G E LK +L+ G PD +T + +S C +A + + L+
Sbjct: 390 SLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEK 449
Query: 387 ---THA----------IAVKLSFQEFLSVAN------------SLISAYSKCGNI----T 417
+H +A F++ SV + S++ S GNI
Sbjct: 450 HRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEE 509
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
+A + F++ E + VT+ ++ + YA G+ E+ +M ++M GV
Sbjct: 510 AAQELFKIEPE-NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 108/289 (37%), Gaps = 54/289 (18%)
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDG 346
H IL++ S + N N D GV E L R I V CG
Sbjct: 13 HGFILKRNLSSFHASLKRFSDKKFFNPNHEDG-GVVVERLCRANRFGEAIDVLCGQ---- 67
Query: 347 SEVLKLLRD---MLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
KLLR+ +L P T + I +C A+ E + H F + +
Sbjct: 68 ----KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
N L+ Y+KCG++ A K F DL +W +++ YA G E+A ++F++M
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE---- 179
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP----------------------- 500
D S+ +++ + L ++LM V P
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 501 ----------DSDH--YTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL 537
DSD ++ L+D+ G+ G IDEA + + VE D +
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI---VEKDVV 285
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 238/435 (54%), Gaps = 1/435 (0%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
L++ Y + G + NAR+ F +P R L N MI+ EE S+F + G + D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD 323
E+T S+ S L IG+ H ++ + D++V S+L +MY +N + D V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 324 EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
M +RN+VAWNT+I+G G VL L + M G P+++T + +S C + +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 384 TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAF 443
Q HA A+K+ ++V +SLIS YSKCG + A K F E+ D V W+S+I AY F
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 444 HGQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDS 502
HGQ ++A E+F M + + V+FL +L AC+H GL KGL F++M Y P
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 503 DHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFI 562
HYTC+VDLLGR G +D+A ++RSMP++ + + +C +H N +A+ +++
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 563 IEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDK 622
I+P S Y ++N++AS + W DV RK + DK K G SW E +VH F D+
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450
Query: 623 THPKALEMYATLKML 637
+ K+ E+Y+ LK L
Sbjct: 451 SQSKSKEIYSYLKEL 465
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 178/367 (48%), Gaps = 8/367 (2%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N +++ Y++ ++ +A K+FDE+P R + +WN MI G+ + + +S F+ M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG-----LSLFREMH 83
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
PD T + ++ +G Q+H YT+K G +LD V +L +Y + G ++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 216 NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD 275
+ ++P R+LV N +I A N PE ++ ++++ G ++ TF ++LS C
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT 335
L G+ H+ ++ S V V S+LI+MY+K + DA F E + V W++
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 336 IIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTISSTISLCGYASAITETLQTHAIAV-K 393
+I G +G G E ++L M + +E+ + + C ++ + L+ + V K
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATE 452
F+ L ++ + G + A R + + D+V W +L+ A H AE A
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 453 MFEKMLS 459
+F+++L
Sbjct: 384 VFKEILQ 390
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 140/287 (48%), Gaps = 10/287 (3%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q+H + IK+G L + + + +Y++ +++D + + +P RN+V+WN +I G A
Sbjct: 110 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA- 168
Query: 136 RDNENDSSAPLCVSY-FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
+ P V Y +K M + P+ +TF ++ SC G G Q+H +K+G
Sbjct: 169 -----QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
V +L+ +Y+KCG + +A +AF D VM + MIS Y + +EA +FN
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 283
Query: 255 L-RMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLVASALINMYAKN 312
+ +E F +LL C D G +L ++ + F + + ++++ +
Sbjct: 284 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 343
Query: 313 ENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
+ A + M I+ ++V W T++ C + + ++ +++L+
Sbjct: 344 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
+ + ++ LIN Y + ++ +AR VFDEM R + WN +I G + E L L R+M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
GFSPDE T+ S S +++ Q H +K + L V +SL Y + G +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
R +LV W +LI A +G E +++ M G P++++F+ VLS+C+
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 478 HCGLVTKG 485
+ +G
Sbjct: 204 DLAIRGQG 211
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 284/560 (50%), Gaps = 8/560 (1%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDN 138
LH + +GF +++ N +L++Y KC + DA LFD++ R++VSWN MI G A N
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 139 ENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC 198
++ + RM + + PD TF + ++ +G LHC VK GFD+D
Sbjct: 226 MSE-----ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM 280
Query: 199 FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
+ AL+ +Y KCG E + R +P +D+V VMIS E+A +F+ +
Sbjct: 281 HLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
G++ +S+++ C L +D+G H +LR + D ++LI MYAK ++ +
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGFSPDELTISSTISLCGY 377
+F+ M R++V+WN II G D + L L +M + D T+ S + C
Sbjct: 401 LVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSS 460
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
A A+ H I ++ + V +L+ YSKCG + +A +CF D+V+W L
Sbjct: 461 AGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGIL 520
Query: 438 IHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
I Y FHG+ + A E++ + L G+ P+ V FL VLS+C+H G+V +GL F+ M +
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFG 580
Query: 498 IVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAA 557
+ P+ +H C+VDLL R I++AF+ + D LG + +C+ + + +
Sbjct: 581 VEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIIC 640
Query: 558 EKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
E + ++P + +Y + + +A+ + W DV + + G K+PG S IE+ + +F
Sbjct: 641 EDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTF 700
Query: 618 VSRDKTHPKALEMYATLKML 637
+H + + LK+L
Sbjct: 701 FMNHTSHSD--DTVSLLKLL 718
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 195/387 (50%), Gaps = 16/387 (4%)
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
+S F ML K++PD TF L+ +C + G+ +H + GF D ++ +LV+L
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 208 YAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
YAK GL+ +AR+ F + RD+V MI CY+ + EA S+ N +R G T
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
+LS LE + L H + FD D+ V ++++N+Y K +++ DA+ +FD+M
Sbjct: 151 LEMLS--GVLEITQLQCL-HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
R++V+WNT+I G + G+ SE+LKLL M +G PD+ T +++S+ G +
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
H VK F + + +LI+ Y KCG ++ + D+V WT +I G+A
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRA 327
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIV------PD 501
EKA +F +ML G + V+++CA G F+L SV+ V D
Sbjct: 328 EKALIVFSEMLQSGSDLSSEAIASVVASCAQLG-------SFDLGASVHGYVLRHGYTLD 380
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ L+ + + G +D++ + M
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERM 407
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 226/500 (45%), Gaps = 25/500 (5%)
Query: 28 SSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFG 87
SSH H S + ++ L PDT + LK A L G +H ++ G
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLL---PDTFTF--PSLLKACASLQRLSFGLSIHQQVLVNG 76
Query: 88 FCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI-----RGVAGRDNENDS 142
F + + ++++Y K + A K+F+E+ R+VV W MI G+ G
Sbjct: 77 FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE------ 130
Query: 143 SAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGC 202
S M + + P VT ++ ++ + LH + V GFD D V
Sbjct: 131 ----ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMN 183
Query: 203 ALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
++++LY KC V +A+ F + RD+V N MIS YA E + +R DG
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 263 DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVF 322
D+ TF + LSV T+ ++G++ H I++ FD D+ + +ALI MY K + V
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
+ + ++VV W +I G G + L + +ML+ G I+S ++ C +
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
H ++ + NSLI+ Y+KCG++ +L F E DLV+W ++I YA
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 443 FHGQAEKATEMFEKMLSCGVVP-DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
+ KA +FE+M V D + + +L AC+ G + G ++ + I P
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPC 482
Query: 502 SDHYTCLVDLLGRYGLIDEA 521
S T LVD+ + G ++ A
Sbjct: 483 SLVDTALVDMYSKCGYLEAA 502
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 173/360 (48%), Gaps = 20/360 (5%)
Query: 37 RLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQN 96
R+R PDQ F +L VS L G+ LH ++K GF + L+
Sbjct: 235 RMRGDGLRPDQQTF----------GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 97 QILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA--GRDNENDSSAPLCVSYFKRM 154
++++YLKC + E + ++ + +P ++VV W +MI G+ GR A + F M
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR-------AEKALIVFSEM 337
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
L ++ SC Q + +G +H Y ++ G+ LD +L+ +YAKCG +
Sbjct: 338 LQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHL 397
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG-DEFTFSSLLSV 273
+ + F + RDLV N +IS YA N +A +F ++ D FT SLL
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAW 333
C + +GKL H +++R LV +AL++MY+K + A+ FD + ++VV+W
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSW 517
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
+I G G +G G L++ + L G P+ + + +S C + + + L+ + V+
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 40/334 (11%)
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
++ S F+ + + D FTF SLL C +L+ G H +L F SD ++S+L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC-GNYGDGSEVLKLLRDMLREGFSPD 364
+N+YAK + AR VF+EM R+VV W T ++GC G E L+ +M +G P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHW-TAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
+T+ + + IT+ H AV F ++V NS+++ Y KC ++ A F
Sbjct: 147 PVTL---LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA------- 477
E+ D+V+W ++I YA G + ++ +M G+ PD+ +F LS
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 478 ----HCGLVTKG----LHYFNLMTSVY-------------QIVPDSDH--YTCLVDLLGR 514
HC +V G +H + ++Y + +P+ D +T ++ L R
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 515 YGLIDEAF----ELLRSMPVEVESDTLGAFIGSC 544
G ++A E+L+S ++ S+ + + + SC
Sbjct: 324 LGRAEKALIVFSEMLQS-GSDLSSEAIASVVASC 356
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV 392
+N+ I ++GD +VL ML PD T S + C ++ L H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 393 KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATE 452
F +++SL++ Y+K G + A K F E D+V WT++I Y+ G +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 453 MFEKMLSCGVVPDRVSFLGVLSA 475
+ +M G+ P V+ L +LS
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG 156
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 236/435 (54%), Gaps = 7/435 (1%)
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDT 276
AR F A+ D+V+ N M Y+ P E FS+F + DG D +TF SLL C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 277 LEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTI 336
+ + G+ H L ++ D +V V LINMY + E++ AR VFD ++ VV +N +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 337 IVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF 396
I G +E L L R+M + P+E+T+ S +S C ++ H A K SF
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
+++ V +LI ++KCG++ A+ F D W+++I AYA HG+AEK+ MFE+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
M S V PD ++FLG+L+AC+H G V +G YF+ M S + IVP HY +VDLL R G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 517 LIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSN 576
+++A+E + +P+ + +C H N+ LAE +E++F ++ +Y +SN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 577 IYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRD-------KTHPKALE 629
+YA + W V+S RK++ D+ KVPGCS IEV N VH F S D K H E
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 630 MYATLKMLHVCLDTS 644
M LK+ DTS
Sbjct: 502 MVKELKLSGYVPDTS 516
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 15/354 (4%)
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCV-SYFKRMLLEKVVPDYVTFNGL 169
A LF+ + ++V +N M RG + N PL V S F +L + ++PD TF L
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTN------PLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV--PCR 227
+ +C + G QLHC ++K+G D + +V L+++Y +C V++AR F + PC
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC- 194
Query: 228 DLVMC-NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA 286
V+C N MI+ YA P EA S+F ++ +E T S+LS C L D+GK
Sbjct: 195 --VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDG 346
H + +F V V +ALI+M+AK ++ DA +F++M ++ AW+ +IV N+G
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 347 SEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV-KLSFQEFLSVANS 405
+ + + M E PDE+T ++ C + + E + + V K + S
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 406 LISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
++ S+ GN+ A + +L P + W L+ A + H + A ++ E++
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIF 426
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A L EG+QLH +K G + + ++++Y +C++++ A +FD + V
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
V +N MI G A R+ N++ +S F+ M + + P+ +T ++ SC ++ +G
Sbjct: 196 VCYNAMITGYARRNRPNEA-----LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+H Y K F V AL+D++AKCG +++A F + +D + MI YA +
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS-LILRQAFDSDVLVA 302
E++ MF +R + DE TF LL+ C + G+ S ++ + +
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370
Query: 303 SALINMYAKNENITDARGVFDEMLIRNV-VAWNTIIVGCGNYGD 345
+++++ ++ N+ DA D++ I + W ++ C ++ +
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 278/561 (49%), Gaps = 5/561 (0%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
KQ+H LI H L N +L L ++ + + LF N+ +N +I G
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV-- 87
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
N+ + F + + TF ++ +C + + +GI LH VK GF+
Sbjct: 88 ---NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D +L+ +Y+ G + +A + F +P R +V + S Y + EA +F +
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
G D + +LS C + D G+ + + V + L+N+YAK +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
AR VFD M+ +++V W+T+I G + E ++L ML+E PD+ +I +S C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
A+ ++ + F L +AN+LI Y+KCG + + F+ +E D+V +
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
I A +G + + +F + G+ PD +FLG+L C H GL+ GL +FN ++ VY
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+ +HY C+VDL GR G++D+A+ L+ MP+ + GA + C+L + LAE
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHS 616
++L +EP + NY +SNIY+ W + R M+ KG K+PG SWIE+ +VH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 617 FVSRDKTHPKALEMYATLKML 637
F++ DK+HP + ++YA L+ L
Sbjct: 565 FLADDKSHPLSDKIYAKLEDL 585
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 11/379 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK + + G LH+ ++K GF H ++ +LS+Y + DA KLFDE+P R+V
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 124 VSWNIMIRG--VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
V+W + G +GR E + FK+M+ V PD ++ +CV ++
Sbjct: 178 VTWTALFSGYTTSGRHRE-------AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS 230
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G + Y ++ + FV LV+LYAKCG +E AR F ++ +D+V + MI YA
Sbjct: 231 GEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
N P+E +F + + D+F+ LS C +L D+G+ SLI R F +++ +
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
A+ALI+MYAK + VF EM +++V N I G G + + G
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 362 SPDELTISSTISLCGYASAITETLQ-THAIAVKLSFQEFLSVANSLISAYSKCGNITSAL 420
SPD T + C +A I + L+ +AI+ + + + ++ + + G + A
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 421 KCF-RLTEEPDLVTWTSLI 438
+ + P+ + W +L+
Sbjct: 471 RLICDMPMRPNAIVWGALL 489
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 242/453 (53%), Gaps = 2/453 (0%)
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
LHC VK F+G LV Y + G A + F +P RDLV N +IS Y+
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 245 PEEAFSMFNLLRMD--GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
+ F + + + + G +E TF S++S C + G+ H L+++ +V V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+A IN Y K ++T + +F+++ I+N+V+WNT+IV G + L R G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
PD+ T + + C + H + + F + +L+ YSK G + +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
F PD + WT+++ AYA HG A + FE M+ G+ PD V+F +L+AC+H GLV
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 483 TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIG 542
+G HYF M+ Y+I P DHY+C+VDLLGR GL+ +A+ L++ MP+E S GA +G
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 543 SCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKV 602
+C+++ + L AAE+LF +EP NY +SNIY++ W D R ++ KG +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 603 PGCSWIEVANQVHSFVSRDKTHPKALEMYATLK 635
GCS+IE N++H FV D +HP++ ++ LK
Sbjct: 473 SGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 176/369 (47%), Gaps = 9/369 (2%)
Query: 94 LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
+ +Q++ YL+ A+KLFDE+P R++VSWN +I G +GR C R
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGK-----CFEVLSR 122
Query: 154 MLLEKV--VPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
M++ +V P+ VTF +I +CV + G +H +K G + V A ++ Y K
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT 182
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G + ++ + F + ++LV N MI + N L E+ + FN+ R G D+ TF ++L
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV 331
C+ + + + H LI+ F + + +AL+++Y+K + D+ VF E+ + +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAI 390
AW ++ +G G + +K M+ G SPD +T + ++ C ++ + E +
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEK 449
+ + L + ++ + G + A + + EP W +L+ A + +
Sbjct: 363 SKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 422
Query: 450 ATEMFEKML 458
T+ E++
Sbjct: 423 GTKAAERLF 431
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
SSL++ + ++ +L H +++ + L+ Y + + A +FDEM
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLL-RDMLRE-GFSPDELTISSTISLCGYASAITETL 385
R++V+WN++I G G + ++L R M+ E GF P+E+T S IS C Y + E
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHG 445
H + +K E + V N+ I+ Y K G++TS+ K F +LV+W ++I + +G
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 446 QAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV--TKGLH 487
AEK F G PD+ +FL VL +C G+V +G+H
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
EG+ +H ++KFG + + N ++ Y K ++ + KLF++L +N+VSWN MI
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI---- 207
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
+ + A ++YF PD TF ++ SC + + +H + GF
Sbjct: 208 -VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ + AL+DLY+K G +E++ F + D + M++ YA + +A F L
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGK-LAHSLILRQAFDSDVLVASALINMYAKNE 313
+ G + D TF+ LL+ C + GK ++ R D + S ++++ ++
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 314 NITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+ DA G+ EM + + W ++ C Y D
Sbjct: 387 LLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 236/410 (57%), Gaps = 2/410 (0%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDG-ANGDEFTFSSLLSVCDTLEYYDIGKLA 286
++ + N +I YA AFS++ +R+ G D T+ L+ T+ +G+
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDG 346
HS+++R F S + V ++L+++YA ++ A VFD+M +++VAWN++I G G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 347 SEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSL 406
E L L +M +G PD TI S +S C A+T + H +K+ L +N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 407 ISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC-GVVPD 465
+ Y++CG + A F + + V+WTSLI A +G ++A E+F+ M S G++P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 466 RVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
++F+G+L AC+HCG+V +G YF M Y+I P +H+ C+VDLL R G + +A+E +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 526 RSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWC 585
+SMP++ +G+C +H + LAE+A ++ +EP S +Y +SN+YAS++ W
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 586 DVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLK 635
DV+ RK + G KVPG S +EV N+VH F+ DK+HP++ +YA LK
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 493
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 188/383 (49%), Gaps = 14/383 (3%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYL----KCKEIEDADKLFDELPGR-NVVSWNIMIR 131
+Q+HA I+ G + + L YL + A K+F ++ NV WN +IR
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G A N + S ++ M + +V PD T+ LI + ++ +G +H +
Sbjct: 94 GYAEIGNSISA-----FSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
+ GF +V +L+ LYA CG V +A + F +P +DLV N +I+ +A N PEEA +
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
++ + G D FT SLLS C + +GK H +++ ++ ++ L+++YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPDELTIS 369
+ + +A+ +FDEM+ +N V+W ++IVG G G E ++L + M EG P E+T
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 370 STISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTE 427
+ C + + E + + + + + ++ ++ G + A + + +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 428 EPDLVTWTSLIHAYAFHGQAEKA 450
+P++V W +L+ A HG ++ A
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLA 411
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 52 DPDT-VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED 110
+PDT + F A+ A G+ +H+ +I+ GF ++ +QN +L +Y C ++
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRL---GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS 174
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
A K+FD++P +++V+WN +I G A ++ ++ + M + + PD T L+
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEA-----LALYTEMNSKGIKPDGFTIVSLL 229
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C + + +G ++H Y +KVG + L+DLYA+CG VE A+ F + ++ V
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLR-MDGANGDEFTFSSLLSVC-------DTLEYYDI 282
+I A+N +EA +F + +G E TF +L C + EY+
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR- 348
Query: 283 GKLAHSLILRQAFDSDVLVA--SALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVG 339
+R+ + + + ++++ A+ + A M ++ NVV W T++
Sbjct: 349 -------RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Query: 340 CGNYGD 345
C +GD
Sbjct: 402 CTVHGD 407
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 288/586 (49%), Gaps = 56/586 (9%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK AK + +G+ LHA ++K GF + ++S+Y+K K++ DA K+ DE+P R +
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGI 97
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVP----DYVTFNGLIGSCVQFHNI 179
S N + G+ EN C F RM + V + VT ++G C +I
Sbjct: 98 ASVNAAVSGLL----ENG----FCRDAF-RMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
G+QLHC +K GF+++ +VG +LV +Y++CG A R F VP + +V N IS
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 240 ALNCLPEEAFSMFNLLR-MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
N + S+FNL+R ++ TF + ++ C +L G+ H L++++ F +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 299 VLVASALINMYAKNENITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
+V +ALI+MY+K A VF E+ RN+++WN++I G G ++L +
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 358 REGFSPDELT-----------------------------------ISSTISLCGYASAIT 382
EG PD T ++S +S C +
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEP-DLVTWTSLIHA 440
+ H +K + + + V SLI Y KCG + A + F R +P D V W +I
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
Y HG+ E A E+FE + V P +F VLSAC+HCG V KG F LM Y P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKL 560
++H C++DLLGR G + EA E++ M S + +GSC+ H + L E AA KL
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAAMKL 564
Query: 561 FIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
+EPE + +S+IYA+ W DVES R++I K K+PG S
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 13/356 (3%)
Query: 161 PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRA 220
P+ TF L+ SC + ++ G LH VK GF +D F ALV +Y K V +A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 221 FCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
+P R + N +S N +AF MF R+ G+ + T +S+L C +E
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG- 147
Query: 281 DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC 340
G H L ++ F+ +V V ++L++MY++ A +F+++ ++VV +N I G
Sbjct: 148 --GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 341 GNYGDGS---EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G + V L+R E P+++T + I+ C + Q H + +K FQ
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 398 EFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
V +LI YSKC SA F L + +L++W S+I +GQ E A E+FEK
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
+ S G+ PD ++ ++S + G V + +F M SV +VP CL LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPS---LKCLTSLL 375
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 296/625 (47%), Gaps = 80/625 (12%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGF------CHVL------------------------- 92
L+V + + EG+Q+H ++++ G C+ L
Sbjct: 96 LQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL 155
Query: 93 SLQNQILSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVAGRDNENDSSAPLCV 148
S N ILS Y K ++DA L DE+ ++V+WN ++ G A + D+ A L
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL-- 213
Query: 149 SYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLY 208
KRM + + P + + L+ + + ++ +G +H Y ++ D +V L+D+Y
Sbjct: 214 ---KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 209 AKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
K G + AR F + +++V N ++S + CL ++A ++ + +G D T++
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
SL S TL K E D G E +
Sbjct: 331 SLASGYATL--------------------------------GKPEKALDVIGKMKEKGVA 358
Query: 329 -NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
NVV+W I GC G+ LK+ M EG P+ T+S+ + + G S + +
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
H ++ + VA +L+ Y K G++ SA++ F + L +W ++ YA G+
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
E+ F ML G+ PD ++F VLS C + GLV +G YF+LM S Y I+P +H +C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
+VDLLGR G +DEA++ +++M ++ ++ GAF+ SCK+H ++ LAE A ++L ++EP
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN 598
Query: 568 SVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKA 627
S NY M N+Y++ W DVE R ++ + SWI++ VH F + KTHP
Sbjct: 599 SANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDE 658
Query: 628 LEMY-------ATLKMLHVCLDTSC 645
++Y + +K DTSC
Sbjct: 659 GDIYFELYKLVSEMKKSGYVPDTSC 683
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 173/419 (41%), Gaps = 80/419 (19%)
Query: 181 VGIQLHCYTVKVGFD-LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN--VMIS 237
+G+ +H +K G D D V A + Y +C + A + F +P RD + N VM++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+ N E+A +F ++ GA + T LL VC E + G+ H +LR +S
Sbjct: 65 LRSGNW--EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
+V + ++LI MY++N + +R VF+ M RN+ +WN+I+ G + + LL +M
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 358 REGFSPDELTISSTISLCGYA------------------------SAITETLQT------ 387
G PD +T +S +S GYA S+I+ LQ
Sbjct: 183 ICGLKPDIVTWNSLLS--GYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 388 -------HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV-------- 432
H ++ + V +LI Y K G + A F + + ++V
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 433 ---------------------------TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
TW SL YA G+ EKA ++ KM GV P+
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 466 RVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
VS+ + S C+ G L F M + P++ + L+ +LG L+ E+
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 279 YYDIGKLAHSLILRQAFD-SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
Y +G H ++++ D SD V SA + Y + ++ A +FDEM R+ +AWN I+
Sbjct: 2 YRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIV 61
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
+ G+ + ++L R+M G + T+ + +C E Q H ++L +
Sbjct: 62 MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
+S+ NSLI YS+ G + + K F ++ +L +W S++ +Y G + A + ++M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
CG+ PD V++ +LS A GL + M + + P + + L+ + G
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPG 239
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 280/569 (49%), Gaps = 7/569 (1%)
Query: 78 QLHAHLIKFG-FCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
Q+HA +I G + S+ +++ + EI A K+FDELP R V +N MI V R
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIV-VYSR 93
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
D L + +M+ EK+ PD TF I +C+ + G + C V G+
Sbjct: 94 GKNPDEVLRL----YDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D FV ++++LY KCG ++ A F + RD++ M++ +A +A + ++
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+G D LL L +G+ H + R +V+V ++L++MYAK I
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
A VF M+ + V+W ++I G G ++ + + +M GF PD +T+ + C
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
++ H +K + ++ A +L+ YSKCG ++S+ + F DLV W +
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I Y HG ++ +F KM + PD +F +LSA +H GLV +G H+F++M + Y
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+I P HY CL+DLL R G ++EA +++ S ++ A + C H N+ + + A
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIA 508
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHS 616
A K+ + P+ +SN +A+ W +V RK++ + KVPG S IEV ++ +
Sbjct: 509 ANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRT 568
Query: 617 FVSRDKTHPKALEMYATLKMLHVCLDTSC 645
F+ D +H + M L+ L + C
Sbjct: 569 FLMEDLSHHEHYHMLQVLRNLKTEIRDVC 597
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 10/369 (2%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L +G+ + + FG+ + + + + +L++Y+KC ++++A+ LF ++ R+V+ W M+ G
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
A + V +++ M E D V GL+ + + +G +H Y +
Sbjct: 192 FA-----QAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT 246
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
G ++ V +LVD+YAK G +E A R F + + V +IS +A N L +AF
Sbjct: 247 GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
++ G D T +L C + G+L H IL++ D + A+AL++MY+K
Sbjct: 307 VEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKC 365
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
++ +R +F+ + +++V WNT+I G +G+G EV+ L M PD T +S +
Sbjct: 366 GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 373 SLCGYASAITETLQTHAIAV-KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD- 430
S ++ + + ++ + K Q LI ++ G + AL +E+ D
Sbjct: 426 SALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN-SEKLDN 484
Query: 431 -LVTWTSLI 438
L W +L+
Sbjct: 485 ALPIWVALL 493
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 255/502 (50%), Gaps = 40/502 (7%)
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN--ARRAFCAVPCRDLV 230
C+ + I Q+H + ++ G D C++ L+ K G+ + ARR V R+
Sbjct: 59 CINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+ +I YA+ +EA +M+ +R + FTFS+LL C T++ ++G+ H+
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV-------------------- 330
R V V + +I+MY K E+I AR VFDEM R+V
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 331 -----------VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
VAW ++ G E L+ M + G DE+T++ IS C
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 380 AITETLQTHAIAVKLSF--QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
A + IA K + + + + ++LI YSKCGN+ A+ F ++ T++S+
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 438 IHAYAFHGQAEKATEMFEKMLS-CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
I A HG+A++A +F M++ + P+ V+F+G L AC+H GLV +G F+ M +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+ P DHYTC+VDLLGR G + EA EL+++M VE GA +G+C++H N +AE A
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN-QVH 615
AE LF +EP+ NY +SN+YAS DW V RK+I +KG K P SW+ N Q+H
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMH 535
Query: 616 SFVSRDKTHPKALEMYATLKML 637
F + HP + ++ L+ L
Sbjct: 536 KFFPGNLNHPMSNKIQDKLEEL 557
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 185/421 (43%), Gaps = 53/421 (12%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED--ADKLFDELPGRNVVSWNIMI 130
L + KQ+H H+++ G + +++ K D A ++ + + RN W +I
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 131 RGVA--GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
RG A G+ +E ++ + M E++ P TF+ L+ +C ++ +G Q H
Sbjct: 122 RGYAIEGKFDE-------AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQ 174
Query: 189 TVKV-GFDLDCFV--GCALVDLYAKCGLVENARRAF------------------------ 221
T ++ GF CFV G ++D+Y KC ++ AR+ F
Sbjct: 175 TFRLRGF---CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 222 -CA------VPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
CA +P +D+V M++ +A N P+EA F+ + G DE T + +S C
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 275 DTLEYYDIGKLAHSLILRQAFD-SD-VLVASALINMYAKNENITDARGVFDEMLIRNVVA 332
L A + + + SD V++ SALI+MY+K N+ +A VF M +NV
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQT-HAI 390
++++I+G +G E L L M+ + P+ +T + C ++ + + Q ++
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEK 449
Q ++ + G + AL+ + ++ EP W +L+ A H E
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 450 A 450
A
Sbjct: 472 A 472
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 124/307 (40%), Gaps = 42/307 (13%)
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITD-- 317
+N E SSL+S D + K H +LR+ D + + LI K D
Sbjct: 42 SNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 318 ARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
AR V + + RN W +I G G E + + M +E +P T S+ + CG
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
+ Q HA +L F+ V N++I Y KC +I A K F E D+++WT L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 438 IHAYAFHGQAEKATEMFE-------------------------------KMLSCGVVPDR 466
I AYA G E A E+FE +M G+ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI--VPDSDHY---TCLVDLLGRYGLIDEA 521
V+ G +SACA G Y + + Q SDH + L+D+ + G ++EA
Sbjct: 282 VTVAGYISACAQLG----ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 522 FELLRSM 528
+ SM
Sbjct: 338 VNVFMSM 344
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 251/458 (54%)
Query: 165 TFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV 224
T++ L+ +C++ +I +++ + + GF+ + ++ ++ ++ KCG++ +ARR F +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 225 PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
P R+L +IS + EAF +F ++ + ++ + TF+ +L L +GK
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
H L+ + V+ LI+MY+K +I DAR F+ M + VAWN +I G +G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
E L LL DM G S D+ T+S I + + + T Q HA ++ F+ +
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
+L+ YSK G + +A F ++++W +L+ YA HG+ A ++FEKM++ V P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
+ V+FL VLSACA+ GL +G F M+ V+ I P + HY C+++LLGR GL+DEA
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 525 LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDW 584
+R P++ + A + +C++ N+ L AEKL+ + PEK NY M N+Y S
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 585 CDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDK 622
+ + + KG + +P C+W+EV +Q HSF+S D+
Sbjct: 545 AEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDR 582
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 203/398 (51%), Gaps = 19/398 (4%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
K+++ ++ GF + N+IL +++KC I DA +LFDE+P RN+ S+ +I G
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
N ++ FK M E + TF ++ + +I VG QLH +K+G
Sbjct: 203 GNYVEA-----FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD 257
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
+ FV C L+D+Y+KCG +E+AR AF +P + V N +I+ YAL+ EEA + +R
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
G + D+FT S ++ + L ++ K AH+ ++R F+S+++ +AL++ Y+K +
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
AR VFD++ +N+++WN ++ G N+G G++ +KL M+ +P+ +T + +S C
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANS------LISAYSKCGNITSALKCFRLTEEPD 430
Y+ L + LS E + +I + G + A+ R
Sbjct: 438 YSG-----LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKT 492
Query: 431 LVT-WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRV 467
V W +L++A E + EK+ G P+++
Sbjct: 493 TVNMWAALLNACRMQENLELGRVVAEKLYGMG--PEKL 528
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLF 115
H F A L+ SA + GKQLH +K G + ++ +Y KC +IEDA F
Sbjct: 224 THTF-AVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 116 DELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
+ +P + V+WN +I G A S LC+ Y M V D T + +I +
Sbjct: 283 ECMPEKTTVAWNNVIAGYA---LHGYSEEALCLLY--DMRDSGVSIDQFTLSIMIRISTK 337
Query: 176 FHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVM 235
+ + Q H ++ GF+ + ALVD Y+K G V+ AR F +P ++++ N +
Sbjct: 338 LAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNAL 397
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
+ YA + +A +F + + TF ++LS C
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 282/545 (51%), Gaps = 28/545 (5%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++S Y+K EI++A K+FD +P RNVVSW +++G ++ + S F +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYV-----HNGKVDVAESLFWKMP 137
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
+ V V G + I C ++ D D +++ K G V+
Sbjct: 138 EKNKVSWTVMLIGFLQDG--------RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 216 NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD 275
AR F + R ++ M++ Y N ++A +F+++ E +++S+L
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSML---- 241
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVA-SALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+ Y G++ + L + ++A +A+I+ + I AR VFD M RN +W
Sbjct: 242 -MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
T+I G E L L M ++G P T+ S +S+C +++ Q HA V+
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
F + VA+ L++ Y KCG + + F D++ W S+I YA HG E+A ++F
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 455 -EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
E LS P+ V+F+ LSAC++ G+V +GL + M SV+ + P + HY C+VD+LG
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLG 480
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAA 573
R G +EA E++ SM VE ++ G+ +G+C+ H+ + +AE+ A+KL IEPE S Y
Sbjct: 481 RAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYIL 540
Query: 574 MSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRD-KTHPKALEMYA 632
+SN+YASQ W DV RK++ + K PGCSW EV N+VH+F +HP E +
Sbjct: 541 LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP---EQES 597
Query: 633 TLKML 637
LK+L
Sbjct: 598 ILKIL 602
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 146/368 (39%), Gaps = 75/368 (20%)
Query: 209 AKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
++ G + AR+ F + + + N M++ Y N +P +A +F DE
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF----------DEMP-- 75
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
D +++ + L++ Y KN I +AR VFD M R
Sbjct: 76 ---------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
NVV+W ++ G + G L M P++ +S T+ L G+ LQ
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGF-------LQDG 155
Query: 389 AIAVKLSFQEFLS-----VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAF 443
I E + S+I K G + A + F E ++TWT+++ Y
Sbjct: 156 RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQ 215
Query: 444 HGQAEKATEMFEKMLSCGVVPDR--VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
+ + + A ++F+ V+P++ VS+ +L G + F +M I +
Sbjct: 216 NNRVDDARKIFD------VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
+ ++ LG+ G I +A + SM ++ ++ K+H G E A LF
Sbjct: 270 A-----MISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGF-ELEALDLF 319
Query: 562 IIEPEKSV 569
I+ ++ V
Sbjct: 320 ILMQKQGV 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 128/319 (40%), Gaps = 57/319 (17%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L V A A L GKQ+HA L++ F + + + ++++Y+KC E+ + +FD P +++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
+ WN +I G A ++ C + L P+ VTF + +C + G+
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFC----EMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+++ E+ F P C M+
Sbjct: 454 KIY----------------------------ESMESVFGVKPITAHYAC--MVDMLGRAG 483
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKL-AHSLILRQAFDSDVLVA 302
EA M + + ++ D + SLL C T D+ + A LI + +S +
Sbjct: 484 RFNEAMEMIDSMTVE---PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI- 539
Query: 303 SALINMYAKN---ENITDARGVFDEMLIRNVV--AWNTI--------IVGCGNYGDGSEV 349
L NMYA ++ + R + L+R +W + G ++ + +
Sbjct: 540 -LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESI 598
Query: 350 LKLLRD---MLRE-GFSPD 364
LK+L + +LRE G++PD
Sbjct: 599 LKILDELDGLLREAGYNPD 617
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 276/567 (48%), Gaps = 51/567 (8%)
Query: 61 ANALKVSAKRA---FLPE------GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+N L +SA R L E GKQ+H ++ GF L L N +L +Y K K++ A
Sbjct: 244 SNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGA 303
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+ +F E+P NVVSWNIMI G G++ +D S V + RM P+ VT ++G
Sbjct: 304 ELIFAEMPEVNVVSWNIMIVGF-GQEYRSDKS----VEFLTRMRDSGFQPNEVTCISVLG 358
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVM 231
+C + G VE RR F ++P +
Sbjct: 359 ACF-----------------------------------RSGDVETGRRIFSSIPQPSVSA 383
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
N M+S Y+ EEA S F ++ D+ T S +LS C L + + GK H +++
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVL 350
R + + S LI +Y++ E + + +FD+ + ++ WN++I G + ++ L
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 351 KLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
L R M + P+E + ++ +S C ++ Q H + VK + V +L
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y KCG I SA + F + V W +IH Y +G+ ++A ++ KM+S G PD ++F
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ VL+AC+H GLV GL + M ++ I P+ DHY C+VD LGR G +++A +L + P
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Query: 530 VEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVES 589
+ S + SC++H ++ LA AEKL ++P+ S Y +SN Y+S R W D +
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAA 743
Query: 590 ARKMIGDKGDAKVPGCSWIEVANQVHS 616
+ ++ K PG SW N + S
Sbjct: 744 LQGLMNKNRVHKTPGQSWTTYGNDLDS 770
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 201/451 (44%), Gaps = 81/451 (17%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL----------------- 118
GK +H +++ G L N++L +Y++C + + A K+FDE+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 119 --------------PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYV 164
P R+VVSWN MI + + E + + +KRM+ + +P
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKA-----LVVYKRMVCDGFLPSRF 139
Query: 165 TFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCG-LVENARRAFCA 223
T ++ +C + + G++ H VK G D + FVG AL+ +YAKCG +V+ R F +
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 224 VPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV------CDTL 277
+ + V +I A EA MF L+ G D S++LS+ CD+L
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 278 -EYY--DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
E Y ++GK H L LR F D+ + ++L+ +YAKN+++ A +F EM NVV+WN
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+IVG G + ++ L M GF P+E+T S + C
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------- 360
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
+ G++ + + F +P + W +++ Y+ + E+A F
Sbjct: 361 ----------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 455 EKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
+M + PD+ + +LS+CA + G
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 176/407 (43%), Gaps = 49/407 (12%)
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF------------------CA 223
G +H + V++G D ++ L+DLY +CG + AR+ F C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 224 V-------------PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
V P RD+V N MIS E+A ++ + DG FT +S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 271 LSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITD-ARGVFDEMLIRN 329
LS C + G H + ++ D ++ V +AL++MYAK I D VF+ + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL------CGYASAITE 383
V++ +I G E +++ R M +G D + +S+ +S+ C S I
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 384 T---LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
Q H +A++L F L + NSL+ Y+K ++ A F E ++V+W +I
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
+ +++K+ E +M G P+ V+ + VL AC G V G F +S+ Q P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF---SSIPQ--P 379
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMP---VEVESDTLGAFIGSC 544
+ ++ Y +EA R M ++ + TL + SC
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 193/462 (41%), Gaps = 53/462 (11%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED-ADKLFDELPGRNVVSWNIMIRGVA 134
G + H +K G + + N +LS+Y KC I D ++F+ L N VS+ +I G+A
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 216
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG---------SCVQFHNIGVGIQL 185
R+N+ V F+ M + V D V + ++ S + + +G Q+
Sbjct: 217 -RENK----VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 271
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP 245
HC +++GF D + +L+++YAK + A F +P ++V N+MI +
Sbjct: 272 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 331
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
+++ +R G +E T S+L C
Sbjct: 332 DKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------------------- 360
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
++ ++ R +F + +V AWN ++ G NY E + R M + PD+
Sbjct: 361 ----FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDK 416
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-R 424
T+S +S C + Q H + ++ + + + LI+ YS+C + + F
Sbjct: 417 TTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACAHCGLVT 483
E D+ W S+I + + KA +F +M V+ P+ SF VLS+C+ +
Sbjct: 477 CINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLL 536
Query: 484 KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
G + L+ V DS T L D+ + G ID A +
Sbjct: 537 HGRQFHGLVVK-SGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 16/338 (4%)
Query: 25 FSNSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLI 84
+SN H S R + Q L D T+ + L A+ FL GKQ+H +I
Sbjct: 391 YSNYEHYEEAISNFR---QMQFQNLKPDKTTLSVI----LSSCARLRFLEGGKQIHGVVI 443
Query: 85 KFGFCHVLSLQNQILSVYLKCKEIEDADKLFDE-LPGRNVVSWNIMIRGVAGRDNENDSS 143
+ + + +++VY +C+++E ++ +FD+ + ++ WN MI G R N D+
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF--RHNMLDTK 501
Query: 144 APLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGC 202
A + F+RM V+ P+ +F ++ SC + ++ G Q H VK G+ D FV
Sbjct: 502 ALI---LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET 558
Query: 203 ALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
AL D+Y KCG +++AR+ F AV ++ V+ N MI Y N +EA ++ + G
Sbjct: 559 ALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKP 618
Query: 263 DEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV 321
D TF S+L+ C + G ++ S+ + ++ +++ + + DA +
Sbjct: 619 DGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Query: 322 FDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
+ + + V W ++ C +GD S ++ ++R
Sbjct: 679 AEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMR 716
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 283/553 (51%), Gaps = 25/553 (4%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED---ADKLFDELPGRNVVSWNIM 129
L E QLH +IK + ++++ C E + A +F+ + +V WN M
Sbjct: 19 LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSM 78
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYT 189
IRG + N + + + +++ ML + PDY TF ++ +C +I G +H +
Sbjct: 79 IRGYSNSPNPDKA-----LIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 190 VKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF 249
VK GF+++ +V L+ +Y CG V R F +P ++V +IS + N +A
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 250 SMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS--------DVLV 301
F ++ +G +E LL C + GK H + FD +V++
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVIL 253
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
A++LI+MYAK ++ AR +FD M R +V+WN+II G GD E L + DML G
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGI 313
Query: 362 SPDELTISSTI--SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
+PD++T S I S+ S + +++ HA K F + ++ +L++ Y+K G+ SA
Sbjct: 314 APDKVTFLSVIRASMIQGCSQLGQSI--HAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG-VVPDRVSFLGVLSACAH 478
K F E+ D + WT +I A HG +A +F++M G PD +++LGVL AC+H
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 479 CGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLG 538
GLV +G YF M ++ + P +HY C+VD+L R G +EA L+++MPV+ + G
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 539 AFIGSCKLHANIGLAEWAAEKLFIIEPEK--SVNYAAMSNIYASQRDWCDVESARKMIGD 596
A + C +H N+ L + + + EPE+ S Y +SNIYA W DV+ R+ +
Sbjct: 492 ALLNGCDIHENLELTDRI--RSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKS 549
Query: 597 KGDAKVPGCSWIE 609
K KV G S +E
Sbjct: 550 KRVDKVLGHSSVE 562
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 289/578 (50%), Gaps = 31/578 (5%)
Query: 71 AFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
A L + KQLHA +I+ L + +++S C++ A ++F+++ NV N +I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
R A N A S +R L D T+ L+ +C + V +H +
Sbjct: 90 RAHA--QNSQPYQAFFVFSEMQRFGL---FADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 191 KVGFDLDCFVGCALVDLYAKCGL--VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
K+G D +V AL+D Y++CG V +A + F + RD V N M+ +A
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD-------SDVLV 301
+F DE L+S L+ Y A + +AF+ + +
Sbjct: 205 RRLF----------DEMPQRDLISWNTMLDGY-----ARCREMSKAFELFEKMPERNTVS 249
Query: 302 ASALINMYAKNENITDARGVFDEMLI--RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
S ++ Y+K ++ AR +FD+M + +NVV W II G G E +L+ M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
G D + S ++ C + ++ ++ H+I + + V N+L+ Y+KCGN+ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
F + DLV+W +++H HG ++A E+F +M G+ PD+V+F+ VL +C H
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGA 539
GL+ +G+ YF M VY +VP +HY CLVDLLGR G + EA +++++MP+E GA
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 540 FIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD 599
+G+C++H + +A+ + L ++P NY+ +SNIYA+ DW V R + G
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 600 AKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
K G S +E+ + +H F DK+HPK+ ++Y L L
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 228/504 (45%), Gaps = 40/504 (7%)
Query: 2 VCKFHFKKQLHFTPILYSFVAQCFS--------NSSHQPH-----PWSRLRASVSVPDQT 48
+ + + + LH P L S ++ C N +P+ R A S P Q
Sbjct: 42 IIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQA 101
Query: 49 --LFRDPDTVHLFCAN-----ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSV 101
+F + LF N LK + +++LP K +H H+ K G + + N ++
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 102 YLKCK--EIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV 159
Y +C + DA KLF+++ R+ VSWN M+ G+ D+ +R+ E
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA---------RRLFDEMP 212
Query: 160 VPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR 219
D +++N ++ + + +L + + + +V Y+K G +E AR
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFEL----FEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 220 AF--CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
F +P +++V ++I+ YA L +EA + + + G D S+L+ C
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
+G HS++ R S+ V +AL++MYAK N+ A VF+++ +++V+WNT++
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSF 396
G G +G G E ++L M REG PD++T + + C +A I E + +++
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFE 455
+ L+ + G + A+K + + EP++V W +L+ A H + + A E+ +
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 456 KMLSCGVV-PDRVSFLGVLSACAH 478
++ P S L + A A
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAE 532
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 251/507 (49%), Gaps = 38/507 (7%)
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
++ F + S ++ I I +H G F+ +VD K ++ A R F
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIH------GLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
V ++ + N +I Y N L + ++ LLR D FTF + C +L
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
+GK H + + V+ +ALI+MY K +++ DA VFDEM R+V++WN+++ G
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 342 NYGDGS-------------------------------EVLKLLRDMLREGFSPDELTISS 370
G E + R+M G PDE+++ S
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+ C ++ H A + F + V N+LI YSKCG I+ A++ F E D
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
+++W+++I YA+HG A A E F +M V P+ ++FLG+LSAC+H G+ +GL YF+
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
+M YQI P +HY CL+D+L R G ++ A E+ ++MP++ +S G+ + SC+ N+
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 426
Query: 551 GLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEV 610
+A A + L +EPE NY ++NIYA W DV RKMI ++ K PG S IEV
Sbjct: 427 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEV 486
Query: 611 ANQVHSFVSRDKTHPKALEMYATLKML 637
N V FVS D + P E+ L++
Sbjct: 487 NNIVQEFVSGDNSKPFWTEISIVLQLF 513
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD + L + L A+ L GK +H + + GF + N ++ +Y KC I A
Sbjct: 238 EPDEISLI--SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+LF ++ G++V+SW+ MI G A N + + + F M KV P+ +TF GL+
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGA-----IETFNEMQRAKVKPNGITFLGLLS 350
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFV---GCALVDLYAKCGLVENARRAFCAVPCR 227
+C G++ + ++ + ++ + GC L+D+ A+ G +E A +P +
Sbjct: 351 ACSHVGMWQEGLR-YFDMMRQDYQIEPKIEHYGC-LIDVLARAGKLERAVEITKTMPMK 407
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/635 (27%), Positives = 302/635 (47%), Gaps = 78/635 (12%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ +H +++K G + + + + +Y KC ++DA K+FDE+P RN V+WN ++ G
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV- 250
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
++ +N+ + L F M + V P VT + + + + G Q H + G +
Sbjct: 251 QNGKNEEAIRL----FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
LD +G +L++ Y K GL+E A F + +D+V N++IS Y L E+A M L+
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGK------LAHS----LIL-------------- 291
R++ D T ++L+S E +GK + HS ++L
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 292 ---RQAFDS----DVLVASALINMYA---------------------------------- 310
++ FDS D+++ + L+ YA
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 311 -KNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
+N + +A+ +F +M +I N+++W T++ G G E + LR M G P+
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 366 LTISSTISLCGYASAITETLQTHAIAVK-LSFQEFLSVANSLISAYSKCGNITSALKCFR 424
+I+ +S C + +++ H ++ L +S+ SL+ Y+KCG+I A K F
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTK 484
+L ++I AYA +G ++A ++ + G+ PD ++ VLSAC H G + +
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSC 544
+ F + S + P +HY +VDLL G ++A L+ MP + ++ + + + SC
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 545 KLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPG 604
L ++ + KL EPE S NY +SN YA + W +V R+M+ KG K PG
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 605 CSWIEVANQ--VHSFVSRDKTHPKALEMYATLKML 637
CSWI++ + VH FV+ DKTH + E+ L +L
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 232/465 (49%), Gaps = 22/465 (4%)
Query: 73 LPEGKQLHAHLIKFG--FCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
L GKQ+HA ++K G + ++ +++ Y KC +E A+ LF +L RNV SW +I
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 131 RGVAGRDNENDSSAPLC---VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHC 187
GV R LC + F ML ++ PD + +C G +H
Sbjct: 146 -GVKCR-------IGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 188 YTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
Y VK G + FV +L D+Y KCG++++A + F +P R+ V N ++ Y N EE
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEE 257
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
A +F+ +R G T S+ LS + + GK +H++ + + D ++ ++L+N
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLN 317
Query: 308 MYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
Y K I A VFD M ++VV WN II G G + + + + M E D +T
Sbjct: 318 FYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
Query: 368 ISSTISLCGYASAITETL----QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
+++ +S A+A TE L + ++ SF+ + +A++++ Y+KCG+I A K F
Sbjct: 378 LATLMS----AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT 483
T E DL+ W +L+ AYA G + +A +F M GV P+ +++ ++ + G V
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 484 KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ F M S I+P+ +T +++ + + G +EA LR M
Sbjct: 494 EAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 166/401 (41%), Gaps = 49/401 (12%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A + +A+ L GK++ + I+ F + L + ++ +Y KC I DA K+FD
Sbjct: 379 ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
++++ WN ++ A E+ S + F M LE V P+ +T+N +I S +
Sbjct: 439 KDLILWNTLLAAYA----ESGLSGE-ALRLFYGMQLEGVPPNVITWNLIILSLL------ 487
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMI 236
+ G V+ A+ F + +L+ M+
Sbjct: 488 -----------------------------RNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
+ N EEA ++ G + F+ + LS C L IG+ H I+R
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 297 SDVL-VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRD 355
S ++ + ++L++MYAK +I A VF L + N +I YG+ E + L R
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 356 MLREGFSPDELTISSTISLCGYASAITETLQTHA-IAVKLSFQEFLSVANSLISAYSKCG 414
+ G PD +TI++ +S C +A I + ++ I K S + L ++ + G
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 415 NITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFE 455
AL RL EE +I + ++ TE+ +
Sbjct: 699 ETEKAL---RLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 292/603 (48%), Gaps = 51/603 (8%)
Query: 77 KQLHAHLIKFGF-CHVLSLQNQILSVYLKCKEIEDADKLF--DELPGRNVVSWNIMIRGV 133
KQ+ A +++F C + I + E D KL + P NV +N MI V
Sbjct: 51 KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV 110
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
+ NE C + M+ +V PD TF L+ + + Q+HC+ + G
Sbjct: 111 SSSKNE-------CFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSG 160
Query: 194 -FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
L ++ +LV Y + G A + F +P D+ NVMI YA EA ++
Sbjct: 161 CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLY 220
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA--FDSDVLVASALINMYA 310
+ DG DE+T SLL C L +GK H I R+ + S++++++AL++MY
Sbjct: 221 FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYF 280
Query: 311 KNE-------------------------------NITDARGVFDEMLIRNVVAWNTIIVG 339
K + ++ A+ VFD+M R++V+WN+++ G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 340 CGNYG-DGSEVLKLLRDM-LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G D V +L +M + E PD +T+ S IS ++ H + ++L +
Sbjct: 341 YSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLK 400
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
++++LI Y KCG I A F+ E D+ WTS+I AFHG ++A ++F +M
Sbjct: 401 GDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
GV P+ V+ L VL+AC+H GLV +GLH FN M + P+++HY LVDLL R G
Sbjct: 461 QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGR 520
Query: 518 IDEAFELL-RSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSN 576
++EA +++ + MP+ G+ + +C+ +I AE A +L +EPEK Y +SN
Sbjct: 521 VEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSN 580
Query: 577 IYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDK-THPKALEMYATLK 635
IYA+ W + R+ + ++G K G S + +H FV+ +K HP+ E+ L+
Sbjct: 581 IYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQ 640
Query: 636 MLH 638
L+
Sbjct: 641 HLY 643
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 201/476 (42%), Gaps = 66/476 (13%)
Query: 11 LHFTP----ILYSFVAQCFSNSSHQPHPW--SRLRASVSVPDQTLFRDPDTVHLFCANAL 64
L+FTP +Y+ + S+S ++ S +R VS PD+ F L
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVS-PDRQTF-------------L 137
Query: 65 KVSAKRAFLPEGKQLHAHLIKFGFCHVLS--LQNQILSVYLKCKEIEDADKLFDELPGRN 122
+ +FL E KQ+H H+I G C L L N ++ Y++ A+K+F +P +
Sbjct: 138 YLMKASSFLSEVKQIHCHIIVSG-CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
V S+N+MI G A + S YFK M+ + + PD T L+ C +I +G
Sbjct: 197 VSSFNVMIVGYA----KQGFSLEALKLYFK-MVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 183 IQLHCYTVKVG--FDLDCFVGCALVDLYAKC----------------------------- 211
+H + + G + + + AL+D+Y KC
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 212 --GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS--MFNLLRMDGANGDEFTF 267
G +E A+ F +P RDLV N ++ Y+ + + + ++ D T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
SL+S G+ H L++R D ++SALI+MY K I A VF
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
++V W ++I G +G+G + L+L M EG +P+ +T+ + ++ C ++ + E L
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 388 -HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF--RLTEEPDLVTWTSLIHA 440
+ + K F SL+ + G + A ++ P W S++ A
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 258/504 (51%), Gaps = 29/504 (5%)
Query: 114 LFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGS 172
+F+ +P WN +I+G + N VS RM+ + PD TF ++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYS-----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKV 119
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
C + VG +H +++GFD D VG + VD Y KC + +AR+ F +P R+ V
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
++ Y + EEA SMF+L+ E S ++ D L G L ++ +
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLM-------PERNLGSWNALVDGL--VKSGDLVNA---K 227
Query: 293 QAFDS----DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
+ FD D++ +++I+ YAK ++ AR +F+E +V AW+ +I+G G +E
Sbjct: 228 KLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNE 287
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYAS--AITETLQTHAIAVKLSFQEFLS--VAN 404
K+ +M + PDE + +S C + E + ++ + +F S V
Sbjct: 288 AFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY---LHQRMNKFSSHYVVP 344
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
+LI +KCG++ A K F + DLV++ S++ A HG +A +FEKM+ G+VP
Sbjct: 345 ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP 404
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
D V+F +L C LV +GL YF LM Y I+ DHY+C+V+LL R G + EA+EL
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYEL 464
Query: 525 LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDW 584
++SMP E + G+ +G C LH N +AE A LF +EP+ + +Y +SNIYA+ W
Sbjct: 465 IKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRW 524
Query: 585 CDVESARKMIGDKGDAKVPGCSWI 608
DV R + + G K+ G SWI
Sbjct: 525 TDVAHLRDKMNENGITKICGRSWI 548
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/638 (27%), Positives = 300/638 (47%), Gaps = 48/638 (7%)
Query: 37 RLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQN 96
RL++S +V D + ++ C + RAFL G Q+HAH I G + L
Sbjct: 30 RLQSSSAVSDDLVLHSAASLLSACVDV------RAFLA-GVQVHAHCISSGVEYHSVLVP 82
Query: 97 QILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL 156
++++ Y +A + + + + WN++I A + + ++ +KRM+
Sbjct: 83 KLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEE-----VIAAYKRMVS 137
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN 216
+ + PD T+ ++ +C + ++ G +H + +V AL+ +Y + +
Sbjct: 138 KGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGI 197
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL------ 270
ARR F + RD V N +I+CYA + EAF +F+ + G T++ +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 271 -----------------------------LSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
L C + +GK H L + ++D V
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
+ LI MY+K +++ A VF + ++ WN+II G E LLR+ML GF
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLS-FQEFLSVANSLISAYSKCGNITSAL 420
P+ +T++S + LC + + + H ++ F+++ + NSL+ Y+K G I +A
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 421 KCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
+ L + D VT+TSLI Y G+ A +F++M G+ PD V+ + VLSAC+H
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 481 LVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAF 540
LV +G F M Y I P H++C+VDL GR G + +A +++ +MP + T
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 541 IGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDA 600
+ +C +H N + +WAAEKL ++PE Y ++N+YA+ W + R ++ D G
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 601 KVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
K PGC+WI+ + F D + P+A Y L L+
Sbjct: 618 KDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLN 655
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 5/239 (2%)
Query: 247 EAFSMFNLLRMDGANG--DEFTF---SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
+AF F+LLR+ ++ D+ +SLLS C + + G H+ + + ++
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
L+ Y+ +A+ + + I + + WN +I EV+ + M+ +G
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD T S + CG + H S++ L V N+LIS Y + N+ A +
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
F E D V+W ++I+ YA G +A E+F+KM GV +++ + C G
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 167/565 (29%), Positives = 277/565 (49%), Gaps = 9/565 (1%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q+H ++K G + + +LS+Y KC + +A+ +F + + + WN M+ A
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA- 349
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
END + F M + V+PD T + +I C G +H K
Sbjct: 350 ---ENDYGYS-ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ 405
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ AL+ LY+KCG +A F ++ +D+V +IS N +EA +F +
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 256 RMD--GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
+ D D +S+ + C LE G H +++ +V V S+LI++Y+K
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV-LKLLRDMLREGFSPDELTISSTI 372
A VF M N+VAWN++I C + + E+ + L ML +G PD ++I+S +
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
+++ + H ++L + N+LI Y KCG A F+ + L+
Sbjct: 585 VAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLI 644
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
TW +I+ Y HG A +F++M G PD V+FL ++SAC H G V +G + F M
Sbjct: 645 TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM 704
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
Y I P+ +HY +VDLLGR GL++EA+ +++MP+E +S + + + H N+ L
Sbjct: 705 KQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVEL 764
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
+AEKL +EPE+ Y + N+Y + ++ +KG K PGCSWIEV++
Sbjct: 765 GILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSD 824
Query: 613 QVHSFVSRDKTHPKALEMYATLKML 637
+ + F S + P E++ L L
Sbjct: 825 RTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 222/462 (48%), Gaps = 19/462 (4%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-NVVSWNIMIRGV 133
EGKQ+H +++ L+ ++ +Y K DA ++F E+ + NVV WN+MI G
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEK---VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
G + +C S +L K V +F G +G+C Q N G G Q+HC V
Sbjct: 248 GG--------SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K+G D +V +L+ +Y+KCG+V A F V + L + N M++ YA N A
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F +R D FT S+++S C L Y+ GK H+ + ++ S + SAL+ +Y+
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML--REGFSPDELTI 368
K DA VF M +++VAW ++I G G E LK+ DM + PD +
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 369 SSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE 428
+S + C A+ LQ H +K + V +SLI YSKCG ALK F
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--L 486
++V W S+I Y+ + E + ++F MLS G+ PD VS VL A + + KG L
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
H + L I D+ L+D+ + G A + + M
Sbjct: 600 HGYTLRLG---IPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 219/480 (45%), Gaps = 18/480 (3%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD------- 116
LK + L GK +H ++ G+ + + ++++Y+KC ++ A ++FD
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 117 ELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQF 176
+ R+V WN MI G + V F+RML+ V PD + + ++ +
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEG-----VGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 177 HNIGV--GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR-DLVMCN 233
N G Q+H + ++ D D F+ AL+D+Y K GL +A R F + + ++V+ N
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 234 VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ 293
VMI + + + E + ++ L + + +F+ L C E G+ H +++
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 294 AFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLL 353
+D V ++L++MY+K + +A VF ++ + + WN ++ G L L
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 354 RDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKC 413
M ++ PD T+S+ IS C HA K Q ++ ++L++ YSKC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 414 GNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML--SCGVVPDRVSFLG 471
G A F+ EE D+V W SLI +G+ ++A ++F M + PD
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
V +ACA + GL M +V + + L+DL + GL + A ++ SM E
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 164/360 (45%), Gaps = 27/360 (7%)
Query: 138 NENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLD 197
+++D S+P S F TF L+ +C N+ G +H V +G+ D
Sbjct: 48 SKHDGSSPFWTSVF-------------TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYD 94
Query: 198 CFVGCALVDLYAKCGLVENARRAF-------CAVPCRDLVMCNVMISCYALNCLPEEAFS 250
F+ +LV++Y KCG ++ A + F V RD+ + N MI Y +E
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 251 MFNLLRMDGANGDEFTFSSLLSV-CDTLEY-YDIGKLAHSLILRQAFDSDVLVASALINM 308
F + + G D F+ S ++SV C + + GK H +LR + D+D + +ALI+M
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 309 YAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
Y K DA VF E+ + NVV WN +IVG G G L L ML + S ++
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVS 272
Query: 368 ISSTISL--CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRL 425
S T +L C + Q H VK+ V SL+S YSKCG + A F
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
+ L W +++ AYA + A ++F M V+PD + V+S C+ GL G
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD+V + + L + A L +GK LH + ++ G L+N ++ +Y+KC + A+
Sbjct: 575 PDSVSI--TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+F ++ +++++WN+MI G + +S F M PD VTF LI +
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGD-----CITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 173 CVQFHNIGVGIQLHCYTVK-VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
C + G + + + G + + +VDL + GL+E A A+P
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/597 (28%), Positives = 286/597 (47%), Gaps = 38/597 (6%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
QLHA ++ F L ++++S Y + A +FDE+ RN S+N ++ R+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 138 NENDSSAPLCVSYFKRMLL--EKVVPDYVTFN---GLIGSCVQFHNIGVGIQLHCYTVKV 192
D+ + L +S+ + PD ++ + + C F + Q+H + ++
Sbjct: 103 MYFDAFS-LFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
GFD D FVG ++ Y KC +E+AR+ F + RD+V N MIS Y+ + E+ M+
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 253 N-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
+L + T S+ C G H ++ D+ + +A+I YAK
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 312 NENITDARGVFDEM-------------------LIRNVVA------------WNTIIVGC 340
++ AR +FDEM L++ +A WN +I G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 341 GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFL 400
EV+ R+M+R G P+ +T+SS + Y+S + + HA A++ +
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 401 SVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC 460
V S+I Y+K G + A + F ++ L+ WT++I AYA HG ++ A +F++M
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
G PD V+ VLSA AH G H F+ M + Y I P +HY C+V +L R G + +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYAS 580
A E + MP++ + GA + + ++ +A +A ++LF +EPE + NY M+N+Y
Sbjct: 522 AMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQ 581
Query: 581 QRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
W + E R + G K+PG SWIE + SF+++D + ++ EMY ++ L
Sbjct: 582 AGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGL 638
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
+QLH V D F+ L+ Y + A F + R+ N ++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 243 CLPEEAFSMF------NLLRMDGANGDEFTFS---SLLSVCDTLEYYDIGKLAHSLILRQ 293
+ +AFS+F + D A D + S LS CD + + H ++R
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 294 AFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLL 353
FDSDV V + +I Y K +NI AR VFDEM R+VV+WN++I G G + K+
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 354 RDMLR-EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
+ ML F P+ +T+ S CG +S + L+ H ++ Q LS+ N++I Y+K
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGV 462
CG++ A F E D VT+ ++I Y HG ++A +F +M S G+
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 198/435 (45%), Gaps = 44/435 (10%)
Query: 53 PDTVHLFCA-NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
PD++ + C AL +Q+H +I+ GF + + N +++ Y KC IE A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL-EKVVPDYVTFNGLI 170
K+FDE+ R+VVSWN MI G + + D C +K ML P+ VT +
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFED-----CKKMYKAMLACSDFKPNGVTVISVF 241
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C Q ++ G+++H ++ +D + A++ YAKCG ++ AR F + +D V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 231 MCNVMISCYALNCLPEEAFSMFN----------------LLRMD---------------G 259
+IS Y + L +EA ++F+ L++ + G
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDAR 319
+ + T SSLL GK H+ +R D+++ V +++I+ YAK + A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
VFD R+++AW II +GD L M G PD++T+++ +S +A
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS--AFAH 479
Query: 380 AITETLQTH---AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWT 435
+ + H ++ K + + ++S S+ G ++ A++ ++ +P W
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 436 SLIHAYAFHGQAEKA 450
+L++ + G E A
Sbjct: 540 ALLNGASVLGDLEIA 554
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/617 (26%), Positives = 286/617 (46%), Gaps = 75/617 (12%)
Query: 91 VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSY 150
++ L ++I S+ K I A ++FD +P + V+WN M+ + ++ ++
Sbjct: 4 LVRLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEA-----IAL 57
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
F ++ PD +F ++ +C N+ G ++ ++ GF V +L+D+Y K
Sbjct: 58 FTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGK 117
Query: 211 CG---------------------------------LVENARRAFCAVPCRDLVMCNVMIS 237
C E A F +P R N+MIS
Sbjct: 118 CSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMIS 177
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI-GKLAHSLILRQAFD 296
+A E S+F + D +TFSSL++ C + G++ H+++L+ +
Sbjct: 178 GHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS 237
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLI----------------------------- 327
S V +++++ Y K + DA + + +
Sbjct: 238 SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLA 297
Query: 328 --RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETL 385
+N+V W T+I G G GDG + L+ +M++ G D + + C + +
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHG 445
H + FQ + V N+L++ Y+KCG+I A + F DLV+W +++ A+ HG
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Query: 446 QAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY 505
A++A ++++ M++ G+ PD V+F+G+L+ C+H GLV +G F M Y+I + DH
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 506 TCLVDLLGRYGLIDEAFELLRSMPVEV----ESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
TC++D+ GR G + EA +L + V + + +G+C H + L ++ L
Sbjct: 478 TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK 537
Query: 562 IIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRD 621
I EP + +++ +SN+Y S W + E R+ + ++G K PGCSWIEV NQV +FV D
Sbjct: 538 IAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGD 597
Query: 622 KTHPKALEMYATLKMLH 638
+HP+ E+ TL L
Sbjct: 598 SSHPRLEELSETLNCLQ 614
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 62/332 (18%)
Query: 54 DTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADK 113
D+ H L + A L GK +H LI GF + N ++++Y KC +I++AD+
Sbjct: 334 DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 114 LFDELPGRNVVSWNIMI--RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
F ++ +++VSWN M+ GV G ++ + + M+ + PD VTF GL+
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQ-------ALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 172 SCVQFHNIGVGIQLHCYTVK---VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
+C + G + VK + ++D V C ++D++ + G + A +D
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVD-HVTC-MIDMFGRGGHLAEA---------KD 495
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
L + ++ L D +N ++ +LL C T + ++G+ S
Sbjct: 496 LA-------------------TTYSSLVTDSSNNS--SWETLLGACSTHWHTELGREV-S 533
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV-----VAW-------NTI 336
+L+ A S+ + L N+Y + V EM+ R + +W +T
Sbjct: 534 KVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTF 593
Query: 337 IVGCGNY---GDGSEVLKLLRDMLR--EGFSP 363
+VG ++ + SE L L+ +R E F P
Sbjct: 594 VVGDSSHPRLEELSETLNCLQHEMRNPETFGP 625
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 295/588 (50%), Gaps = 11/588 (1%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD V + + ++ A+ L + +H + + F +L N +L++Y KC ++ +
Sbjct: 199 EPDAVTMI--SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+++F+++ +N VSW MI N + S S F M+ + P+ VT ++
Sbjct: 257 ERIFEKIAKKNAVSWTAMISSY----NRGEFSEKALRS-FSEMIKSGIEPNLVTLYSVLS 311
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDC-FVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
SC I G +H + V+ D + + ALV+LYA+CG + + V R++V
Sbjct: 312 SCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
N +IS YA + +A +F + D FT +S +S C+ +GK H +
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+R SD V ++LI+MY+K+ ++ A VF+++ R+VV WN+++ G G+ E +
Sbjct: 432 IRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
L M +E+T + I C ++ + H + ++ + +LI Y
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT-DTALIDMY 549
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
+KCG++ +A FR +V+W+S+I+AY HG+ A F +M+ G P+ V F+
Sbjct: 550 AKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
VLSAC H G V +G +YFNLM S + + P+S+H+ C +DLL R G + EA+ ++ MP
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPF 668
Query: 531 EVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESA 590
++ G+ + C++H + + + L I + + Y +SNIYA + +W +
Sbjct: 669 LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRL 728
Query: 591 RKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
R + KVPG S IE+ +V F + ++ + E+Y L L
Sbjct: 729 RSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQ 776
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 237/490 (48%), Gaps = 14/490 (2%)
Query: 67 SAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSW 126
+ R L G ++H +IK G ++ +L +Y + + DA+K+FD +P R++V+W
Sbjct: 111 AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAW 170
Query: 127 NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
+ ++ EN + FK M+ + V PD VT ++ C + + + +H
Sbjct: 171 STLVSSCL----ENGEVVK-ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
+ FDLD + +L+ +Y+KCG + ++ R F + ++ V MIS Y E
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE 285
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS-AL 305
+A F+ + G + T S+LS C + GK H +R+ D + S AL
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
+ +YA+ ++D V + RN+VAWN++I + G + L L R M+ + PD
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRL 425
T++S+IS C A + Q H ++ + V NSLI YSK G++ SA F
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
+ +VTW S++ ++ +G + +A +F+ M + + V+FL V+ AC+ G + KG
Sbjct: 465 IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Query: 486 --LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGS 543
+H+ +++ + + D T L+D+ + G ++ A + R+M + I +
Sbjct: 525 KWVHHKLIISGLKDLFTD----TALIDMYAKCGDLNAAETVFRAMSSRSIVSWS-SMINA 579
Query: 544 CKLHANIGLA 553
+H IG A
Sbjct: 580 YGMHGRIGSA 589
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 214/452 (47%), Gaps = 20/452 (4%)
Query: 78 QLHAHLIKFGFCHVLSLQ-NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
QLHAHL+ G L +++ Y + + +F+ P + + ++I+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC---- 74
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCV-QFHNIGVGIQLHCYTVKVGFD 195
N + + R++ E F ++ +C ++ VG ++H +K G D
Sbjct: 75 -NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD 133
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D + +L+ +Y + G + +A + F +P RDLV + ++S N +A MF +
Sbjct: 134 DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
DG D T S++ C L I + H I R+ FD D + ++L+ MY+K ++
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE-VLKLLRDMLREGFSPDELTISSTISL 374
+ +F+++ +N V+W T ++ N G+ SE L+ +M++ G P+ +T+ S +S
Sbjct: 254 LSSERIFEKIAKKNAVSW-TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 375 CGYASAITETLQTHAIAVKLSFQ-EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT 433
CG I E H AV+ + S++ +L+ Y++CG ++ R+ + ++V
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 434 WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNL 491
W SLI YA G +A +F +M++ + PD + +SAC + GLV G +H +
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 492 MTSVYQIVPDSDHY--TCLVDLLGRYGLIDEA 521
T V SD + L+D+ + G +D A
Sbjct: 433 RTDV------SDEFVQNSLIDMYSKSGSVDSA 458
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 195/405 (48%), Gaps = 39/405 (9%)
Query: 184 QLHCYTVKVG-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
QLH + + G D L++ YA G +++R F A P D M V+I C
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 243 CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC-DTLEYYDIGKLAHSLILRQAFDSDVLV 301
L + A +++ L + +F F S+L C + E+ +G H I++ D D ++
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
++L+ MY + N++DA VFD M +R++VAW+T++ C G+ + L++ + M+ +G
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD +T+ S + C + H + F ++ NSL++ YSKCG++ S+ +
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL 481
F + + V+WT++I +Y +EKA F +M+ G+ P+ V+ VLS+C GL
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 482 VTKG--LHYFNLM---------------------------TSVYQIVPDSD--HYTCLVD 510
+ +G +H F + +V ++V D + + L+
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 511 LLGRYGLIDEAFELLRSM---PVEVESDTLGAFIGSCKLHANIGL 552
L G++ +A L R M ++ ++ TL + I +C+ N GL
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE---NAGL 420
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 225/389 (57%), Gaps = 5/389 (1%)
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
++ DG + D + SS + C + G H L L+ F SDV + S+L+ +Y +
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ +A VF+EM RNVV+W +I G LKL M + P++ T ++ +S
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
C + A+ + H + + + +L ++NSLIS Y KCG++ A + F D+V+W
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 435 TSLIHAYAFHGQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMT 493
S+I YA HG A +A E+FE M+ G PD +++LGVLS+C H GLV +G +FNLM
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 494 SVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLA 553
+ + P+ +HY+CLVDLLGR+GL+ EA EL+ +MP++ S G+ + SC++H ++
Sbjct: 351 E-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 554 EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQ 613
AAE+ ++EP+ + + ++N+YAS W + + RK++ DKG PGCSWIE+ N
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
Query: 614 VHSFVSRDKTHPKALEMYATLKMLHVCLD 642
V F + D ++ + LE+ + +LH +D
Sbjct: 470 VFMFKAEDGSNCRMLEI---VHVLHCLID 495
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF 221
D + + SC + G HC +K GF D ++G +LV LY G VENA + F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 222 CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
+P R++V MIS +A + +++ +R ++ +++TF++LLS C
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
G+ H L S + ++++LI+MY K ++ DA +FD+ ++VV+WN++I G
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 342 NYGDGSEVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFL 400
+G + ++L M+ + G PD +T +S C +A + E + + + + L
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 401 SVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ + L+ + G + AL+ + +P+ V W SL+ + HG E+ L
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 7/272 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G H +K GF + L + ++ +Y E+E+A K+F+E+P RNVVSW MI G A
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFA- 197
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+ +C+ + +M P+ TF L+ +C +G G +HC T+ +G
Sbjct: 198 ----QEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ +L+ +Y KCG +++A R F +D+V N MI+ YA + L +A +F L+
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 256 R-MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
G D T+ +LS C G+ +L+ ++ S L+++ +
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGL 373
Query: 315 ITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+ +A + + M ++ N V W +++ C +GD
Sbjct: 374 LQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 35 WSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSL 94
+S++R S S P+ F L L +G+ +H + G L +
Sbjct: 209 YSKMRKSTSDPNDYTF----------TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 95 QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRM 154
N ++S+Y KC +++DA ++FD+ ++VVSWN MI G A A + F+ M
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA-----QHGLAMQAIELFELM 313
Query: 155 LLEK-VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
+ + PD +T+ G++ SC + G + + G + LVDL + GL
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGL 373
Query: 214 VENARRAFCAVPCR--DLVMCNVMISC 238
++ A +P + ++ +++ SC
Sbjct: 374 LQEALELIENMPMKPNSVIWGSLLFSC 400
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 213/357 (59%), Gaps = 1/357 (0%)
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG 341
+G+ HS+++R F S + V ++L+++YA ++ A VFD+M +++VAWN++I G
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 342 NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLS 401
G E L L +M +G PD TI S +S C A+T + H +K+ L
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 402 VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC- 460
+N L+ Y++CG + A F + + V+WTSLI A +G ++A E+F+ M S
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
G++P ++F+G+L AC+HCG+V +G YF M Y+I P +H+ C+VDLL R G + +
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYAS 580
A+E ++SMP++ +G+C +H + LAE+A ++ +EP S +Y +SN+YAS
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 305
Query: 581 QRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
++ W DV+ RK + G KVPG S +EV N+VH F+ DK+HP++ +YA LK +
Sbjct: 306 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 3/276 (1%)
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
++ +G +H ++ GF +V +L+ LYA CG V +A + F +P +DLV N +I+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+A N PEEA +++ + G D FT SLLS C + +GK H +++
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
++ ++ L+++YA+ + +A+ +FDEM+ +N V+W ++IVG G G E ++L + M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 358 R-EGFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGN 415
EG P E+T + C + + E + + + + + ++ ++ G
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 416 ITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKA 450
+ A + + + +P++V W +L+ A HG ++ A
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 136/274 (49%), Gaps = 10/274 (3%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ +H+ +I+ GF ++ +QN +L +Y C ++ A K+FD++P +++V+WN +I G A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
++ ++ + M + + PD T L+ +C + + +G ++H Y +KVG
Sbjct: 67 NGKPEEA-----LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ L+DLYA+CG VE A+ F + ++ V +I A+N +EA +F +
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 256 R-MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA--SALINMYAKN 312
+G E TF +L C G + +R+ + + + ++++ A+
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 313 ENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+ A M ++ NVV W T++ C +GD
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 75/296 (25%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L AK L GK++H ++IK G L N +L +Y +C +E+A LFDE+ +N
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRM-LLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
VSW +I G+A + + FK M E ++P +TF G++ +C
Sbjct: 156 VSWTSLIVGLA-----VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-------- 202
Query: 183 IQLHCYTVKVGFD--------------LDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
HC VK GF+ ++ F GC +VDL A+ G V+ A ++P +
Sbjct: 203 ---HCGMVKEGFEYFRRMREEYKIEPRIEHF-GC-MVDLLARAGQVKKAYEYIKSMPMQP 257
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
NV+I + +LL C D+ + A
Sbjct: 258 ----NVVI------------------------------WRTLLGACTVHGDSDLAEFARI 283
Query: 289 LILR--QAFDSDVLVASALINMYAKNENITDARGVFDEML---IRNVVAWNTIIVG 339
IL+ D ++ S NMYA + +D + + +ML ++ V + + VG
Sbjct: 284 QILQLEPNHSGDYVLLS---NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 336
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/670 (26%), Positives = 303/670 (45%), Gaps = 93/670 (13%)
Query: 46 DQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFC-HVLSLQNQILSVYLK 104
DQ+LF D + C A + +Q+HA ++ F SL ++SVY +
Sbjct: 52 DQSLFHYFDHLLGLCLTA----------QQCRQVHAQVLLSDFIFRSGSLAANLISVYAR 101
Query: 105 CKEIEDADKLFDELPG---RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVP 161
+ DA +F+ + ++ WN +++ N + + ++ M +
Sbjct: 102 LGLLLDARNVFETVSLVLLSDLRLWNSILKA-----NVSHGLYENALELYRGMRQRGLTG 156
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF 221
D ++ +C G+ H +++G + V L+ LY K G + +A F
Sbjct: 157 DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLF 216
Query: 222 CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS--------- 272
+P R+ + NVMI ++ E A +F ++ + DE T++S+LS
Sbjct: 217 VEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFE 276
Query: 273 --------------------------VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
VC LE I + H +++ F+ + +ALI
Sbjct: 277 DVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALI 336
Query: 307 NMYAKNENITDARGVFDEMLIR-------------------------------------- 328
++Y K + DA +F ++ +
Sbjct: 337 HVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK 396
Query: 329 -NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
NVV W ++I GC G G + L+ R M + +TI +S+C A+ +
Sbjct: 397 ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 456
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
H ++ S E + V N+L++ Y+KCG ++ F + DL++W S+I Y HG A
Sbjct: 457 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 516
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
EKA MF++M+S G PD ++ + VLSAC+H GLV KG F M+ + + P +HY C
Sbjct: 517 EKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 576
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
+VDLLGR G + EA E++++MP+E + LGA + SC++H N+ +AE A +L ++EPE+
Sbjct: 577 IVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPER 636
Query: 568 SVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKA 627
+ +Y +SNIY++ W + + R + K KV G SWIEV + + F S +
Sbjct: 637 TGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEF 696
Query: 628 LEMYATLKML 637
+Y L+ L
Sbjct: 697 ETIYPVLEDL 706
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/517 (31%), Positives = 261/517 (50%), Gaps = 12/517 (2%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++S Y K +++A LF +P NVVSWN +I G D +P + + RM
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV------DKGSPRALEFLVRMQ 230
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
E +V D + +C + +G QLHC VK G + F AL+D+Y+ CG +
Sbjct: 231 REGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLI 290
Query: 216 NARRAF----CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
A F AV + + N M+S + +N E A + + D +T S L
Sbjct: 291 YAADVFHQEKLAVNS-SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGAL 349
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV 331
+C +G HSL++ ++ D +V S L++++A NI DA +F + ++++
Sbjct: 350 KICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDII 409
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
A++ +I GC G S L R++++ G D+ +S+ + +C +++ Q H +
Sbjct: 410 AFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLC 469
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
+K ++ A +L+ Y KCG I + + F E D+V+WT +I + +G+ E+A
Sbjct: 470 IKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAF 529
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDL 511
F KM++ G+ P++V+FLG+LSAC H GL+ + M S Y + P +HY C+VDL
Sbjct: 530 RYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDL 589
Query: 512 LGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNY 571
LG+ GL EA EL+ MP+E + + + +C H N GL AEKL P+ Y
Sbjct: 590 LGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVY 649
Query: 572 AAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWI 608
++SN YA+ W + R+ G AK G SWI
Sbjct: 650 TSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 204/424 (48%), Gaps = 11/424 (2%)
Query: 63 ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP--- 119
LK + L GKQLH ++K G + ++ +Y C + A +F +
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
+V WN M+ G + EN+++ L + ++ L D T +G + C+ + N+
Sbjct: 304 NSSVAVWNSMLSGFL-INEENEAALWLLLQIYQSDL----CFDSYTLSGALKICINYVNL 358
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
+G+Q+H V G++LD VG LVDL+A G +++A + F +P +D++ + +I
Sbjct: 359 RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
+ AF +F L G + D+F S++L VC +L GK H L +++ ++S+
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
+ A+AL++MY K I + +FD ML R+VV+W IIVG G G E + M+
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 360 GFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
G P+++T +S C ++ + E T + + + +L ++ + G
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 419 ALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
A + ++ EPD WTSL+ A H A T + EK+L G D + + +A A
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSLSNAYA 657
Query: 478 HCGL 481
G+
Sbjct: 658 TLGM 661
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 211/503 (41%), Gaps = 42/503 (8%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
A L+ K G+ + AH+IK G + + N ++S+Y+ + + DA K+FDE+
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML-LEKVVPDYVTFNGLIGSCVQFHNI 179
RN+V+W M+ G N + + ++RML E+ + ++ ++ +C +I
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKA-----IELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCY 239
+GI ++ K D + ++VD+Y K G + A +F + N +IS Y
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 240 ALNCLPEEAFSMFN----------------------------LLRM--DGANGDEFTFSS 269
L +EA ++F+ L+RM +G D F
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC 243
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVF-DEMLIR 328
L C +GK H +++ +S SALI+MY+ ++ A VF E L
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 329 N--VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
N V WN+++ G + L LL + + D T+S + +C + LQ
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
H++ V ++ V + L+ ++ GNI A K F D++ ++ LI G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL-MTSVYQIVPDSDHY 505
A +F +++ G+ D+ +L C+ + G L + Y+ P +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA-- 481
Query: 506 TCLVDLLGRYGLIDEAFELLRSM 528
T LVD+ + G ID L M
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGM 504
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 165/391 (42%), Gaps = 39/391 (9%)
Query: 174 VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN 233
VQ G IQ H +K G + F+ ++ +Y L+ +A + F + R++V
Sbjct: 18 VQAFKRGESIQAH--VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 234 VMISCYALNCLPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
M+S Y + P +A ++ +L + +EF +S++L C + +G L + I +
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG------------- 339
+ DV++ +++++MY KN + +A F E+L + +WNT+I G
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 340 ----------------CGNYGDGS-EVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
G GS L+ L M REG D + + C + +T
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF---RLTEEPDLVTWTSLIH 439
Q H VK + ++LI YS CG++ A F +L + W S++
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 440 AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL-MTSVYQI 498
+ + + E A + ++ + D + G L C + + GL +L + S Y++
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
D + LVDL G I +A +L +P
Sbjct: 376 --DYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 49 LFRDP-----DTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYL 103
LFR+ D +N LKV + A L GKQ+H IK G+ ++ +Y+
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYV 489
Query: 104 KCKEIEDADKLFDELPGRNVVSWNIMIRGVA--GRDNENDSSAPLCVSYFKRMLLEKVVP 161
KC EI++ LFD + R+VVSW +I G GR E YF +M+ + P
Sbjct: 490 KCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE-------AFRYFHKMINIGIEP 542
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARR 219
+ VTF GL+ +C + + + T+K + L+ ++ +VDL + GL + A
Sbjct: 543 NKVTFLGLLSAC-RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANE 601
Query: 220 AFCAVP 225
+P
Sbjct: 602 LINKMP 607
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 35/195 (17%)
Query: 368 ISSTISLCGYASAIT--ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRL 425
I++ + CG A E++Q H I +S F +AN++IS Y ++ A K F
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVF--IANNVISMYVDFRLLSDAHKVFDE 65
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTK 484
E ++VTWT+++ Y G+ KA E++ +ML S + + VL AC G +
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 485 GLHYFN------------LMTSVYQIV------------------PDSDHYTCLVDLLGR 514
G+ + LM SV + P S + L+ +
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 515 YGLIDEAFELLRSMP 529
GL+DEA L MP
Sbjct: 186 AGLMDEAVTLFHRMP 200
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 275/566 (48%), Gaps = 56/566 (9%)
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCK-EIEDA----DKLFDELPGRNVVSWNIMIRG 132
Q+H IK+G +++ L C I DA +L P + +N ++RG
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFMFNTLVRG 79
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
+ D ++S V+ F M+ + V PD +F +I + F ++ G Q+HC +K
Sbjct: 80 YSESDEPHNS-----VAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALK 134
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS-CYALNCLPEEAFS 250
G + FVG L+ +Y CG VE AR+ F + +LV N +I+ C+ N
Sbjct: 135 HGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN-------- 186
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
V E +D +++R +V++A Y
Sbjct: 187 ---------------------DVAGAREIFD------KMLVRNHTSWNVMLAG-----YI 214
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K + A+ +F EM R+ V+W+T+IVG + G +E R++ R G SP+E++++
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+S C + + H K + +SV N+LI YS+CGN+ A F +E
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 431 -LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
+V+WTS+I A HGQ E+A +F +M + GV PD +SF+ +L AC+H GL+ +G YF
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+ M VY I P+ +HY C+VDL GR G + +A++ + MP+ + +G+C H N
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
I LAE ++L ++P S + +SN YA+ W DV S RK + + K S +E
Sbjct: 455 IELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Query: 610 VANQVHSFVSRDKTHPKALEMYATLK 635
V ++ F + +K +E + LK
Sbjct: 515 VGKTMYKFTAGEKKKGIDIEAHEKLK 540
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 149/366 (40%), Gaps = 52/366 (14%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN---ARRAFCAVP 225
L+ SC N+ Q+H +K G D D + L+ L+ + + ARR P
Sbjct: 11 LLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFP 66
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
D M N ++ Y+ + P + ++F ++R D F+F+ ++ + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
H L+ +S + V + LI MY + AR VFDEM N+VAWN +I C
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
D + ++ ML ++ H + N
Sbjct: 187 DVAGAREIFDKML---------------------------VRNH------------TSWN 207
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
+++ Y K G + SA + F D V+W+++I A +G ++ F ++ G+ P
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 465 DRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
+ VS GVLSAC+ G G LH F IV ++ L+D+ R G + A
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN---ALIDMYSRCGNVPMAR 324
Query: 523 ELLRSM 528
+ M
Sbjct: 325 LVFEGM 330
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 272/540 (50%), Gaps = 38/540 (7%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++S Y+K + I +A +F+ +P RNVVSW M++G ++ S F RM
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAE-----SLFWRMP 137
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH-CYTVKVGFDLDCFVGCALVDLYAKCGLV 214
V V F GLI I +L+ VK D ++ + G V
Sbjct: 138 ERNEVSWTVMFGGLIDD----GRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRV 188
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL--- 271
+ AR F + R++V MI+ Y N + A +F ++ E +++S+L
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGY 244
Query: 272 ----SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
+ D E++++ + V+ +A+I + + I+ AR VFD M
Sbjct: 245 TLSGRIEDAEEFFEVMPM-----------KPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
R+ W +I G E L L M ++G P ++ S +S+C +++ Q
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
HA V+ F + + VA+ L++ Y KCG + A F D++ W S+I YA HG
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
E+A ++F +M S G +P++V+ + +L+AC++ G + +GL F M S + + P +HY+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
VD+LGR G +D+A EL+ SM ++ ++ GA +G+CK H+ + LAE AA+KLF EP+
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 568 SVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRD-KTHPK 626
+ Y +S+I AS+ W DV RK + +K PGCSWIEV +VH F K HP+
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 46/340 (13%)
Query: 200 VGCAL-VDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
V C+ + ++ G + AR+ F ++ + + N ++S Y N LP+EA +F+ +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--- 74
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL--RQAF----DSDVLVASALINMYAKN 312
+ + +++ L+S G + + +I+ R F + +V+ +A++ Y +
Sbjct: 75 -SERNVVSWNGLVS----------GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQE 123
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
+ +A +F M RN V+W + G + G + KL DM+ P + ++ST
Sbjct: 124 GMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY-DMM-----PVKDVVASTN 177
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEF----LSVANSLISAYSKCGNITSALKCFRLTEE 428
+ G + +L F E + ++I+ Y + + A K F + E
Sbjct: 178 MIGGLCR------EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
V+WTS++ Y G+ E A E FE M V+ +G G ++K
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISKARRV 287
Query: 489 FNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
F+LM D+ + ++ R G EA +L M
Sbjct: 288 FDLMED-----RDNATWRGMIKAYERKGFELEALDLFAQM 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L V A A L G+Q+HAHL++ F + + + ++++Y+KC E+ A +FD +++
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
+ WN +I G A ++ + F M +P+ VT ++ +C + G+
Sbjct: 398 IMWNSIISGYASHGLGEEA-----LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 184 QL 185
++
Sbjct: 453 EI 454
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 245/498 (49%), Gaps = 36/498 (7%)
Query: 174 VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN 233
+ +N+ Q HCY + G + D ++ + G + A F PC + + N
Sbjct: 23 IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 234 VMISCYALNCLPEE---AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
MI +L P A +++ L A D FTF +L + + G+ H +
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD----- 345
+ FDS V V + LI MY + DAR +FDEML+++V WN ++ G G G+
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 346 ----------------------------GSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
SE +++ + ML E PDE+T+ + +S C
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
++ + + +S+ N++I Y+K GNIT AL F E ++VTWT++
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 438 IHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
I A HG +A MF +M+ GV P+ V+F+ +LSAC+H G V G FN M S Y
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 498 IVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAA 557
I P+ +HY C++DLLGR G + EA E+++SMP + + G+ + + +H ++ L E A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 558 EKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
+L +EP S NY ++N+Y++ W + R M+ G K+ G S IEV N+V+ F
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 618 VSRDKTHPKALEMYATLK 635
+S D THP+ ++ L+
Sbjct: 503 ISGDLTHPQVERIHEILQ 520
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 166/383 (43%), Gaps = 37/383 (9%)
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
A +F P N N MIR ++ D N S + ++ ++++ PD TF ++
Sbjct: 66 AYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHS--IAITVYRKLWALCAKPDTFTFPFVL 123
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
V+ ++ G Q+H V GFD V L+ +Y CG + +AR+ F + +D+
Sbjct: 124 KIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVN 183
Query: 231 MCNVM---------------------------------ISCYALNCLPEEAFSMFNLLRM 257
+ N + IS YA + EA +F + M
Sbjct: 184 VWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLM 243
Query: 258 DGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITD 317
+ DE T ++LS C L ++G+ S + + + V + +A+I+MYAK+ NIT
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITK 303
Query: 318 ARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
A VF+ + RNVV W TII G +G G+E L + M++ G P+++T + +S C +
Sbjct: 304 ALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSH 363
Query: 378 ASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWT 435
+ + +++ K + +I + G + A + + + + + W
Sbjct: 364 VGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 436 SLIHAYAFHGQAEKATEMFEKML 458
SL+ A H E +++
Sbjct: 424 SLLAASNVHHDLELGERALSELI 446
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 144/313 (46%), Gaps = 32/313 (10%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK++ + + + G+Q+H ++ FGF + + ++ +Y C + DA K+FDE+ ++V
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 124 VSWNIMIRGVAGRDNENDSSAPL-----------------------------CVSYFKRM 154
WN ++ G G+ E D + L + F+RM
Sbjct: 183 NVWNALLAGY-GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
L+E V PD VT ++ +C ++ +G ++ Y G + + A++D+YAK G +
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
A F V R++V +I+ A + EA +MFN + G ++ TF ++LS C
Sbjct: 302 TKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Query: 275 DTLEYYDIGK-LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVA 332
+ + D+GK L +S+ + ++ +I++ + + +A V M + N
Sbjct: 362 SHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
Query: 333 WNTIIVGCGNYGD 345
W +++ + D
Sbjct: 422 WGSLLAASNVHHD 434
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD V L L A L G+++ +++ G +SL N ++ +Y K I A
Sbjct: 247 EPDEVTLLAV--LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+F+ + RNVV+W +I G+A + ++ ++ F RM+ V P+ VTF ++
Sbjct: 305 LDVFECVNERNVVTWTTIIAGLATHGHGAEA-----LAMFNRMVKAGVRPNDVTFIAILS 359
Query: 172 SCVQFHNIGVGIQL-HCYTVKVGFDLDC-FVGCALVDLYAKCGLVENARRAFCAVPCR 227
+C + +G +L + K G + GC ++DL + G + A ++P +
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC-MIDLLGRAGKLREADEVIKSMPFK 416
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 283/563 (50%), Gaps = 10/563 (1%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
K + AH++K GF +S ++++ LKC +I+ A ++FD + R++V+WN +I +
Sbjct: 85 KTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
++ V ++ M+ V+PD T + + + + H V +G ++
Sbjct: 144 RRSKEA-----VEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV 198
Query: 197 -DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ FVG ALVD+Y K G A+ V +D+V+ +I Y+ EA F +
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
++ +E+T++S+L C L+ GKL H L+++ F+S + ++L+ MY + +
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
D+ VF + N V+W ++I G G L R M+R+ P+ T+SS + C
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
+ E Q H I K F + LI Y KCG A F E D+++
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
++I++YA +G +A ++FE+M++ G+ P+ V+ L VL AC + LV +G F+
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK- 497
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEW 555
+I+ +DHY C+VDLLGR G ++EA E+L + + + + +CK+H + +AE
Sbjct: 498 DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAER 556
Query: 556 AAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVH 615
K+ IEP MSN+YAS W V + + D K P SW+E+ + H
Sbjct: 557 ITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETH 616
Query: 616 SFVSRDK-THPKALEMYATLKML 637
+F++ D +HP + ++ L+ L
Sbjct: 617 TFMAGDLFSHPNSEQILENLEEL 639
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
+ GK +H ++K GF L+ Q +L++YL+C ++D+ ++F + N VSW +I G
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+ E + + F++M+ + + P+ T + + C G Q+H K
Sbjct: 343 LVQNGRE-----EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
GFD D + G L+DLY KCG + AR F + D++ N MI YA N EA +F
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLF 457
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA-----LIN 307
+ G ++ T S+L C+ + G L +F D ++ + +++
Sbjct: 458 ERMINLGLQPNDVTVLSVLLACNNSRLVEEG-----CELFDSFRKDKIMLTNDHYACMVD 512
Query: 308 MYAKNENITDARGVFDEMLIRNVVAWNTIIVGC 340
+ + + +A + E++ ++V W T++ C
Sbjct: 513 LLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 47 QTLFRDPDTVHLFC-ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKC 105
+ + RD + F ++AL+ + A EG+Q+H + K+GF + ++ +Y KC
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 106 KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
+ A +FD L +V+S N MI A + + F+RM+ + P+ VT
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYA-----QNGFGREALDLFERMINLGLQPNDVT 471
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
++ +C + G +L K L +VDL + G +E A V
Sbjct: 472 VLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVI 531
Query: 226 CRDLVMCNVMIS 237
DLV+ ++S
Sbjct: 532 NPDLVLWRTLLS 543
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 247/461 (53%), Gaps = 9/461 (1%)
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
LH T+K+GF D F LV Y K + AR+ F + ++V +IS Y
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 245 PEEAFSMFNLLRMDG-ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
P+ A SMF + D +E+TF+S+ C L IGK H+ + +++V+S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 304 ALINMYAKNENITDARGVFDEMLI--RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
+L++MY K ++ AR VFD M+ RNVV+W ++I G E ++L R
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAAL 229
Query: 362 SPD---ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
+ D + ++S IS C + H + + ++ VA SL+ Y+KCG+++
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 419 ALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH 478
A K F ++++TS+I A A HG E A ++F++M++ + P+ V+ LGVL AC+H
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 479 CGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTL- 537
GLV +GL Y +LM Y +VPDS HYTC+VD+LGR+G +DEA+EL +++ V E L
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 538 -GAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGD 596
GA + + +LH + + A+++L + + Y A+SN YA W D ES R +
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 597 KGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
G+ K CSWIE + V+ F + D + ++ E+ LK L
Sbjct: 470 SGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDL 510
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 210/437 (48%), Gaps = 38/437 (8%)
Query: 45 PDQTLF---RDPDTVHL----FCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
P +LF D HL F + L S AF LH +K GF N
Sbjct: 13 PATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFT---NLLHTLTLKLGFASDTFTVNH 69
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPL-CVSYFKRMLL 156
++ Y+K KEI A KLFDE+ NVVSW +I G ND P +S F++M
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY------NDMGKPQNALSMFQKMHE 123
Query: 157 EK-VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
++ V P+ TF + +C +G +H G + V +LVD+Y KC VE
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 216 NARRAFCAVP--CRDLVMCNVMISCYALNCLPEEAFSMFN----LLRMDGANGDEFTFSS 269
ARR F ++ R++V MI+ YA N EA +F L D AN +F +S
Sbjct: 184 TARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN--QFMLAS 241
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
++S C +L GK+AH L+ R ++S+ +VA++L++MYAK +++ A +F + +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
V+++ ++I+ +G G +KL +M+ +P+ +T+ + C ++ + E L+
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY-- 359
Query: 390 IAVKLSFQEFLSVANS-----LISAYSKCGNITSALKCFRLTE---EPDLVTWTSLIHAY 441
+ L +++ V +S ++ + G + A + + E E + W +L+ A
Sbjct: 360 --LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 442 AFHGQAEKATEMFEKML 458
HG+ E +E ++++
Sbjct: 418 RLHGRVEIVSEASKRLI 434
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
L H+L L+ F SD + L+ Y K + I AR +FDEM NVV+W ++I G + G
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 345 DGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHAIAVKL---SFQEFL 400
L + + M + P+E T +S C SA+ E+ I +L + +
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKAC---SALAESRIGKNIHARLEISGLRRNI 166
Query: 401 SVANSLISAYSKCGNITSALKCF--RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
V++SL+ Y KC ++ +A + F + ++V+WTS+I AYA + + +A E+F +
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSF 225
Query: 459 SCGVVPDRVS---FLGVLSAC-----------AHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
+ + DR + V+SAC AH GLVT+G + N + +
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAH-GLVTRGGYESNTVVA---------- 274
Query: 505 YTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
T L+D+ + G + A ++ + + ++ ++ A GL E AA KLF
Sbjct: 275 -TSLLDMYAKCGSLSCAEKIF----LRIRCHSVISYTSMIMAKAKHGLGE-AAVKLF 325
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 235/463 (50%), Gaps = 37/463 (7%)
Query: 208 YAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
YA G + ++ F DL + I+ ++N L ++AF ++ L N +EFTF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM------------------- 308
SSLL C T GKL H+ +L+ D VA+ L+++
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 309 ------------YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
YAK N+ AR +FD M R++V+WN +I G +G ++ L L + +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 357 LREGF-SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGN 415
L EG PDE+T+ + +S C A+ H + + V LI YSKCG+
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS-CGVVPDRVSFLGVLS 474
+ A+ F T D+V W ++I YA HG ++ A +F +M G+ P ++F+G L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 475 ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVES 534
ACAH GLV +G+ F M Y I P +HY CLV LLGR G + A+E +++M ++ +S
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 535 DTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMI 594
+ +GSCKLH + L + AE L + + S Y +SNIYAS D+ V R ++
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 595 GDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
+KG K PG S IE+ N+VH F + D+ H K+ E+Y L+ +
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 179/405 (44%), Gaps = 60/405 (14%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
+ ++L ++ P+ TF+ L+ SC + G +H + +K G +D +V LVD+YAK
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAK 173
Query: 211 CGLVENARRAFCAVPCRDLV------------------------MC-------NVMISCY 239
G V +A++ F +P R LV MC NVMI Y
Sbjct: 174 GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGY 233
Query: 240 ALNCLPEEAFSMFNLLRMDGA-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
A + P +A +F L +G DE T + LS C + + G+ H + +
Sbjct: 234 AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN 293
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
V V + LI+MY+K ++ +A VF++ +++VAWN +I G +G + L+L +M
Sbjct: 294 VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQG 353
Query: 359 -EGFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNI 416
G P ++T T+ C +A + E ++ ++ + + + L+S + G +
Sbjct: 354 ITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL 413
Query: 417 TSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
A + + + + D V W+S++ + HG E+ E ++
Sbjct: 414 KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI----------------- 456
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
GL K + L++++Y V D + + +L+ G++ E
Sbjct: 457 ----GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE 497
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 43/316 (13%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-------------- 121
GK +H H++KFG + ++ VY K ++ A K+FD +P R
Sbjct: 145 GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 122 -----------------NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE-KVVPDY 163
++VSWN+MI G A ND+ + F+++L E K PD
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA-----LMLFQKLLAEGKPKPDE 259
Query: 164 VTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCA 223
+T + +C Q + G +H + L+ V L+D+Y+KCG +E A F
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 224 VPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR-MDGANGDEFTFSSLLSVCDTLEYYDI 282
P +D+V N MI+ YA++ ++A +FN ++ + G + TF L C +
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 283 G-KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM-LIRNVVAWNTIIVGC 340
G ++ S+ + L+++ + + A M + + V W++++ C
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 341 GNYGD---GSEVLKLL 353
+GD G E+ + L
Sbjct: 440 KLHGDFVLGKEIAEYL 455
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 210/361 (58%), Gaps = 8/361 (2%)
Query: 285 LAHSLILRQAFDS----DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC 340
++H + RQ FD +V+ +A+++ YA++ +I++A +F++M R+V +WN I+ C
Sbjct: 175 VSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAAC 234
Query: 341 GNYGDGSEVLKLLRDMLRE-GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
G E + L R M+ E P+E+T+ +S C + HA A +
Sbjct: 235 TQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD 294
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ V+NSL+ Y KCGN+ A F++ + L W S+I+ +A HG++E+A +FE+M+
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 460 CGV---VPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
+ PD ++F+G+L+AC H GLV+KG YF+LMT+ + I P +HY CL+DLLGR G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 517 LIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSN 576
DEA E++ +M ++ + G+ + +CK+H ++ LAE A + L + P A M+N
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMAN 474
Query: 577 IYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKM 636
+Y +W + ARKMI + K PG S IE+ N+VH F S DK+HP+ E+Y L
Sbjct: 475 LYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDS 534
Query: 637 L 637
L
Sbjct: 535 L 535
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLK-CKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
+H HL K GF + +Q +L Y I A +LFDE+ RNVVSW M+ G A
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 138 NENDSSAPL--------------------------CVSYFKRMLLEKVV-PDYVTFNGLI 170
+ +++ A VS F+RM+ E + P+ VT ++
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C Q + + +H + + D FV +LVDLY KCG +E A F + L
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 231 MCNVMISCYALNCLPEEAFSMFN---LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
N MI+C+AL+ EEA ++F L ++ D TF LL+ C G+
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 288 SLIL-RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYG- 344
L+ R + + LI++ + +A V M ++ + W +++ C +G
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Query: 345 -DGSEV 349
D +EV
Sbjct: 448 LDLAEV 453
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 203 ALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN-LLRMDGAN 261
A++ YA+ G + NA F +P RD+ N +++ N L EA S+F ++
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 262 GDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV 321
+E T +LS C + K H+ R+ SDV V+++L+++Y K N+ +A V
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 322 FDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR---EGFSPDELTISSTISLCGYA 378
F +++ AWN++I +G E + + +M++ PD +T ++ C +
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHG 377
Query: 379 SAITE-----TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLV 432
+++ L T+ ++ + + LI + G AL+ + + D
Sbjct: 378 GLVSKGRGYFDLMTNRFGIEPRIEHY----GCLIDLLGRAGRFDEALEVMSTMKMKADEA 433
Query: 433 TWTSLIHAYAFHGQAEKA 450
W SL++A HG + A
Sbjct: 434 IWGSLLNACKIHGHLDLA 451
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYG--DGSEVLKLLRDML-REGFSPDELTISS 370
N++ AR +FD N + ++ + S R M+ R P+
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY-SKCGNITSALKCFRLTEEP 429
+ Y S+ T H K F ++ V +L+ +Y S +IT A + F E
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR--VSFLGVLSACAHCGLVTKGLH 487
++V+WT+++ YA G A +FE M P+R S+ +L+AC GL + +
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDM------PERDVPSWNAILAACTQNGLFLEAVS 245
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID-----EAFELLRSMPVEV-ESDTLGAFI 541
F M + I P+ C++ + G + AF R + +V S++L
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 542 GSC 544
G C
Sbjct: 306 GKC 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 52/274 (18%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
P+ V + C L A+ L K +HA + + + N ++ +Y KC +E+A
Sbjct: 258 PNEVTVVCV--LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 113 KLFDELPGRNVVSWNIMIR--GVAGRDNENDSSAPLCVSYFKRML---LEKVVPDYVTFN 167
+F +++ +WN MI + GR E ++ F+ M+ + + PD++TF
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEE-------AIAVFEEMMKLNINDIKPDHITFI 368
Query: 168 GLIGSCVQFHNIGVGI-QLHCYTVKVGFDLDC-FVGCALVDLYAKCGLVENARRAFCAVP 225
GL+ +C + G T + G + GC L+DL + G
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC-LIDLLGRAGRF----------- 416
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKL 285
+EA + + ++M DE + SLL+ C + D+ ++
Sbjct: 417 --------------------DEALEVMSTMKMK---ADEAIWGSLLNACKIHGHLDLAEV 453
Query: 286 AHSLILRQAFDSDVLVASALINMYAKNENITDAR 319
A ++ ++ VA + N+Y + N +AR
Sbjct: 454 AVKNLVALNPNNGGYVA-MMANLYGEMGNWEEAR 486
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 290/664 (43%), Gaps = 101/664 (15%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L +G H IK G NQ++++Y K + +A +FDE+ RNV SWN +I
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 133 VAGRDN--------ENDSSAPLCVSY-----------------------FKRMLLEKVVP 161
+N E+D+ ++Y R + +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN----- 216
D T ++ + N+ G QLH VK G D F +L+ +Y+KCG +
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 217 -----------ARRAFCAVPCR------------------DLVMCNVMISCYALNCLPEE 247
AR A A CR D + N +I+ YA N EE
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
A M + +G DE +F ++L+V +L+ IGK H+ +L+ S+ V+S +++
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 308 MYAKNENI-------------------------------TDARGVFDEMLIRNVVAWNTI 336
+Y K N+ +A+ +FD + +N+V W +
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 337 IVGCGNYGDGSEVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLS 395
+G N VL+L R + E +PD L + S + C + + + H +++
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG 423
Query: 396 FQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFE 455
+ + + YSKCGN+ A + F + E D V + ++I A HG K+ + FE
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 456 KMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRY 515
M G PD ++F+ +LSAC H GLV +G YF M Y I P++ HYTC++DL G+
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 516 GLIDEAFELLRSM-PVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAM 574
+D+A EL+ + VE ++ LGAF+ +C + N L + EKL +IE Y +
Sbjct: 544 YRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQI 603
Query: 575 SNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
+N YAS W +++ R + K GCSW + Q H F S D +H + +YA
Sbjct: 604 ANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYA-- 661
Query: 635 KMLH 638
MLH
Sbjct: 662 -MLH 664
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD+ L + L + +A++ GK++H H ++ G L + +Y KC +E A+
Sbjct: 391 PDS--LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAE 448
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
++FD R+ V +N MI G A +E S +F+ M PD +TF L+ +
Sbjct: 449 RIFDSSFERDTVMYNAMIAGCAHHGHEAKS-----FQHFEDMTEGGFKPDEITFMALLSA 503
Query: 173 C 173
C
Sbjct: 504 C 504
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 274/540 (50%), Gaps = 44/540 (8%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
G+ LHAHL+ G + + ++++ Y++C ++ DA K+FDE+P R++ +MI G
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI-GAC 92
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
R+ S + +F+ M + + D L+ + + G +HC +K +
Sbjct: 93 ARNGYYQES----LDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY 148
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
+ D F+ +L+D+Y+K G V NAR+ F + +DLV+ N MIS YA N +EA ++
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+++ G DV+ +ALI+ ++ N
Sbjct: 209 MKLLG-----------------------------------IKPDVITWNALISGFSHMRN 233
Query: 315 ITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
+ + M + +VV+W +II G + + + ML G P+ TI +
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+ C + + + H +V ++ V ++L+ Y KCG I+ A+ FR T +
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
VT+ S+I YA HG A+KA E+F++M + G D ++F +L+AC+H GL G + F
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
LM + Y+IVP +HY C+VDLLGR G + EA+E++++M +E + GA + +C+ H N+
Sbjct: 414 LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNM 473
Query: 551 GLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEV 610
LA AA+ L +EPE S N ++++YA+ W V +KMI K + G SW+E
Sbjct: 474 ELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 285/590 (48%), Gaps = 37/590 (6%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-NVVSWNIMIRGVAG 135
KQLHAH+++ H L+ LSV + A +F +P + +N +R
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLR---- 84
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D S + +++R+ D +F ++ + + + G++LH K+
Sbjct: 85 -DLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D FV +D+YA CG + AR F + RD+V N MI Y L +EAF +F +
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 256 RMDGANGDEFTFSSLLSVC-------------DTLEYYDIGKLAHSL------------- 289
+ DE +++S C + L D+ H L
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 290 -----ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
R+ ++ V++A+++ Y+K + DA+ +FD+ +++V W T+I
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
E L++ +M G PD +++ S IS C + + H+ + LS+ N
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
+LI+ Y+KCG + + F ++V+W+S+I+A + HG+A A +F +M V P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
+ V+F+GVL C+H GLV +G F MT Y I P +HY C+VDL GR L+ EA E+
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503
Query: 525 LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDW 584
+ SMPV G+ + +C++H + L ++AA+++ +EP+ MSNIYA ++ W
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRW 563
Query: 585 CDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
DV + R+++ +K K G S I+ + H F+ DK H ++ E+YA L
Sbjct: 564 EDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 38/418 (9%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK +K + L EG +LH K ++ + +Y C I A +FDE+ R+V
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
V+WN MI R D + L F+ M V+PD + ++ +C + N+
Sbjct: 178 VTWNTMIERYC-RFGLVDEAFKL----FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 184 QLHCYTVKVGFDLDC-------------------------------FVGCALVDLYAKCG 212
++ + ++ +D FV A+V Y+KCG
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
+++A+ F +DLV MIS Y + P+EA +F + G D + S++S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 273 VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA 332
C L D K HS I +S++ + +ALINMYAK + R VF++M RNVV+
Sbjct: 353 ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS 412
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA-IA 391
W+++I +G+ S+ L L M +E P+E+T + C ++ + E + A +
Sbjct: 413 WSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 472
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAE 448
+ + L ++ + + + AL+ + ++V W SL+ A HG+ E
Sbjct: 473 DEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 178/463 (38%), Gaps = 102/463 (22%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD V +F + + A L + K +H+ + G LS+ N ++++Y KC ++
Sbjct: 342 PDVVSMF--SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+F+++P RNVVSW+ MI ++ +D+ +S F RM E V P+ VTF G++
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDA-----LSLFARMKQENVEPNEVTFVGVLYG 454
Query: 173 CVQFHNIGVGIQLHC-----YTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
C + G ++ Y + + GC +VDL+ + L+ A ++P
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLE---HYGC-MVDLFGRANLLREALEVIESMP-- 508
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
V NV+I + SL+S C ++GK A
Sbjct: 509 --VASNVVI------------------------------WGSLMSACRIHGELELGKFAA 536
Query: 288 SLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGS 347
IL D D + + N+YA+ + D R + M +NV
Sbjct: 537 KRILELEPDHDGALV-LMSNIYAREQRWEDVRNIRRVMEEKNVFK--------------- 580
Query: 348 EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLI 407
+G S + S L G Q++ I KL E +S L
Sbjct: 581 ----------EKGLSRIDQNGKSHEFLIGD----KRHKQSNEIYAKL--DEVVSKL-KLA 623
Query: 408 SAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRV 467
CG S L E+ DLV W S A F E E E+ SCGV +
Sbjct: 624 GYVPDCG---SVLVDVEEEEKKDLVLWHSEKLALCFGLMNE---EKEEEKDSCGV----I 673
Query: 468 SFLGVLSACAHCGLVTKGLHYFNLMTSVYQ---IVPDSDHYTC 507
+ L C C L +F L++ VY+ IV D + C
Sbjct: 674 RIVKNLRVCEDCHL------FFKLVSKVYEREIIVRDRTRFHC 710
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 273/555 (49%), Gaps = 18/555 (3%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A + +GK +H+H+ F + + ++ Y KC E+E A K+FDE+P R++
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVS-----YFKRMLLEKVVPDYVTFNGLIGSCVQFHN 178
V+WN MI G S C++ + ++ + P+ T G+ + +
Sbjct: 170 VAWNAMISGF---------SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 179 IGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISC 238
+ G +H Y ++GF D V ++D+YAK + ARR F ++ V + MI
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 239 YALNCLPEEAFSMF--NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
Y N + +EA +F L+ + A +L C G+ H ++ F
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
D+ V + +I+ YAK ++ DA F E+ +++V+++N++I GC E +L +M
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
G PD T+ ++ C + +A+ H V + S+ N+L+ Y+KCG +
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKL 460
Query: 417 TSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
A + F + D+V+W +++ + HG ++A +F M GV PD V+ L +LSAC
Sbjct: 461 DVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC 520
Query: 477 AHCGLVTKGLHYFNLMT-SVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD 535
+H GLV +G FN M+ + ++P DHY C+ DLL R G +DEA++ + MP E +
Sbjct: 521 SHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIR 580
Query: 536 TLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIG 595
LG + +C + N L ++K+ + E + + +SN Y++ W D R +
Sbjct: 581 VLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQK 639
Query: 596 DKGDAKVPGCSWIEV 610
+G K PG SW++V
Sbjct: 640 KRGLLKTPGYSWVDV 654
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 243/516 (47%), Gaps = 60/516 (11%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSV-----YLKCKEIEDADKLFDELPGR--NVVSWNI 128
G+ +H HL+K L+L + + V Y C E+E A +FDE+P N ++W++
Sbjct: 18 GQVIHQHLLK----RSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
MIR A D A + + +ML V P T+ ++ +C I G +H +
Sbjct: 74 MIRAYASND-----FAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 189 TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
F D +V ALVD YAKCG +E A + F +P RD+V N MIS ++L+C +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 249 FSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
+F ++ R+DG + + T + GK H R F +D++V + +++
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 308 MYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
+YAK++ I AR VFD +N V W+ +I G Y + +E++K ++ + D +
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMI---GGYVE-NEMIKEAGEVFFQMLVNDNVA 304
Query: 368 ISSTISL------CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
+ + +++ C ++ H AVK F L+V N++IS Y+K G++ A +
Sbjct: 305 MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL 481
F D++++ SLI + + E++ +F +M + G+ PD + LGVL+AC+H
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 482 VTKG--------LHYFNLMTS----------------VYQIVPDSDHYTCLVDL------ 511
+ G +H + + TS V + V D+ H +V
Sbjct: 425 LGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFG 484
Query: 512 LGRYGLIDEAFELLRSMP---VEVESDTLGAFIGSC 544
G +GL EA L SM V + TL A + +C
Sbjct: 485 FGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC 520
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 176/370 (47%), Gaps = 19/370 (5%)
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDC-FVGCALVDLYAKCGLVENARRAFCAV 224
F L+ +C++ N+ +G +H + +K L V L LYA C VE AR F +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 225 PCRDL--VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
P + + ++MI YA N E+A ++ + G ++T+ +L C L D
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
GKL HS + F +D+ V +AL++ YAK + A VFDEM R++VAWN +I G
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 343 YGDGSEVLKLLRDMLR-EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLS 401
+ ++V+ L DM R +G SP+ TI G A A+ E H ++ F L
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 402 VANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
V ++ Y+K I A + F L + + VTW+++I Y + ++A E+F +ML
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML--- 298
Query: 462 VVPDRVSFLG------VLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
V D V+ + +L CA G ++ G +H + + + D ++
Sbjct: 299 -VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAG---FILDLTVQNTIISFYA 354
Query: 514 RYGLIDEAFE 523
+YG + +AF
Sbjct: 355 KYGSLCDAFR 364
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 263/533 (49%), Gaps = 48/533 (9%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYL---KCKEIEDADKLFDELPG 120
L + + L E +Q HA ++K G H +++++ + K + A + + +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
N + N +IR A N S+ + ++ F+ MLL V PD +F ++ +C F
Sbjct: 103 PNGFTHNSVIRAYA-----NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G Q+H +K G D FV LV++Y + G E AR+ +P RD V N ++S Y
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
L +EA ++F+ M+ N + + F
Sbjct: 218 EKGLVDEARALFD--EMEERNVESWNF--------------------------------- 242
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
+I+ YA + +A+ VFD M +R+VV+WN ++ + G +EVL++ ML +
Sbjct: 243 ----MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 361 FS-PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
PD T+ S +S C ++++ H K + +A +L+ YSKCG I A
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
L+ FR T + D+ TW S+I + HG + A E+F +M+ G P+ ++F+GVLSAC H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGA 539
G++ + F +M+SVY++ P +HY C+VDLLGR G I+EA EL+ +P + S L +
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 540 FIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARK 592
+G+CK + AE A +L + S YA MSN+YAS W V R+
Sbjct: 479 LLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 265/535 (49%), Gaps = 16/535 (2%)
Query: 92 LSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
+SL ++++ Y + + DA LFDE+P R+VVSWN MI G + N + V F
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA-----VKLF 120
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
M VV ++ ++ C + + +L Y + V D ++V Y +
Sbjct: 121 DEMPERSVV----SWTAMVNGCFRSGKVDQAERLF-YQMPVK---DTAAWNSMVHGYLQF 172
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGANGDEFTFSSL 270
G V++A + F +P ++++ MI N EA +F N+LR F+ +
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC-CIKSTSRPFTCV 231
Query: 271 LSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
++ C + +G H LI++ F + V+++LI YA + I D+R VFDE + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
W ++ G + L + MLR P++ T +S ++ C + + H +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
AVKL + V NSL+ YS GN+ A+ F + +V+W S+I A HG+ + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 451 TEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS-VYQIVPDSDHYTCLV 509
+F +M+ PD ++F G+LSAC+HCG + KG F M+S + I HYTC+V
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMV 471
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
D+LGR G + EA EL+ M V+ A + +C++H+++ E AA +F ++ + S
Sbjct: 472 DILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSA 531
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTH 624
Y +SNIYAS W +V R + G K PG SW+ + + H F S D+ H
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G Q+H +IK GF + + +++ Y CK I D+ K+FDE V W ++ G +
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
D+ +S F ML ++P+ TF + SC + G ++H VK+G +
Sbjct: 304 NKKHEDA-----LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D FVG +LV +Y+ G V +A F + + +V N +I A + + AF +F +
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR--QAFDSDVLVASALINMYAKNE 313
DE TF+ LLS C + + G+ + D + + ++++ +
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 314 NITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+ +A + + M+++ N + W ++ C + D
Sbjct: 479 KLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
+ Q V + + +I Y ++ + DA +FDEM +R+VV+WN++I GC GD +
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA 116
Query: 350 LKLLRDMLREGFSPDELTISSTISLCG-YASAITETLQTHAIAVKLSFQEFLSVANSLIS 408
+KL +M P+ +S T + G + S + Q + ++ ++ + NS++
Sbjct: 117 VKLFDEM------PERSVVSWTAMVNGCFRSGKVD--QAERLFYQMPVKD-TAAWNSMVH 167
Query: 409 AYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
Y + G + ALK F+ ++++WT++I + ++ +A ++F+ ML C +
Sbjct: 168 GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 469 FLGVLSACA-----HCGLVTKGL 486
F V++ACA H G+ GL
Sbjct: 228 FTCVITACANAPAFHMGIQVHGL 250
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 153/406 (37%), Gaps = 79/406 (19%)
Query: 38 LRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
LR S+ +P+Q+ F A+ L + L GK++H +K G + N
Sbjct: 318 LRNSI-LPNQSTF----------ASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE 157
++ +Y + DA +F ++ +++VSWN +I G A F +M+
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCA-----QHGRGKWAFVIFGQMIRL 421
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
PD +TF GL+ +C HC ++ G L Y + +
Sbjct: 422 NKEPDEITFTGLLSACS-----------HCGFLEKGRKL----------FYYMSSGINHI 460
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
R C M +++ C L E L+ +E + +LLS C
Sbjct: 461 DRKIQHYTC----MVDILGRCGKLKEAEE-------LIERMVVKPNEMVWLALLSACRMH 509
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALI-NMYAKNENITDARGVFDEMLIRNVV----- 331
D G+ A + I DS A L+ N+YA ++ + +M ++
Sbjct: 510 SDVDRGEKAAAAIFN--LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGS 567
Query: 332 AWNTIIVGCGNYGDGS--------EVLKLLRDMLRE-GFSPDELTISSTISLCGYASAIT 382
+W I + G E L+ LR+ L+E G++PD Y SA+
Sbjct: 568 SWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPD------------YRSALH 615
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE 428
+ + E L++A LI+ G+ + +K R+ E+
Sbjct: 616 DVEDEQKEEMLWYHSERLAIAFGLINTVE--GSAVTVMKNLRVCED 659
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/561 (28%), Positives = 287/561 (51%), Gaps = 15/561 (2%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKE-IEDA 111
P T L+ A+ L+ K G Q HAH++K G ++ N +LS+Y K + +
Sbjct: 58 PATPKLY-ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 112 DKLFDELPGRNVVSWNIMIRG-VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
++FD ++ +SW M+ G V G+++ + F M+ + + T + +
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVK------ALEVFVEMVSFGLDANEFTLSSAV 170
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C + + +G H + GF+ + F+ L LY +ARR F +P D++
Sbjct: 171 KACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVI 230
Query: 231 MCNVMISCYALNCLPEEAFSMFNLL-RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL 289
++S ++ N L EEA +F + R G D TF ++L+ C L GK H
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEV 349
++ S+V+V S+L++MY K ++ +AR VF+ M +N V+W+ ++ G G+ +
Sbjct: 291 LITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKA 350
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
+++ R+M + D + + C +A+ + H V+ + V ++LI
Sbjct: 351 IEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDL 406
Query: 410 YSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
Y K G I SA + + +++TW +++ A A +G+ E+A F M+ G+ PD +SF
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ +L+AC H G+V +G +YF LM Y I P ++HY+C++DLLGR GL +EA LL
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Query: 530 VEVESDTLGAFIGSCKLHANIG-LAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVE 588
++ G +G C +A+ +AE A+++ +EP+ ++Y +SN+Y + D
Sbjct: 527 CRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDAL 586
Query: 589 SARKMIGDKGDAKVPGCSWIE 609
+ RK++ +G AK G SWI+
Sbjct: 587 NIRKLMVRRGVAKTVGQSWID 607
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 244/502 (48%), Gaps = 40/502 (7%)
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD-LVM 231
C + + LH + VK+G C + LV++Y KCG +A + F +P RD +
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
+V+ + N + ++ G D+F FS+L+ C L D G+ H +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK 351
+ +D +V S+L++MYAK + A+ VFD + ++N ++W ++ G G E L+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 352 LLR-------------------------------DMLREGFSP-DELTISSTISLCGYAS 379
L R +M RE D L +SS + C +
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 380 AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIH 439
A Q H + + L F + ++N+LI Y+KC ++ +A F D+V+WTSLI
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 440 AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIV 499
A HGQAEKA +++ M+S GV P+ V+F+G++ AC+H G V KG F MT Y I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 500 PDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN----IGLAEW 555
P HYTCL+DLLGR GL+DEA L+ +MP + T A + +CK I +A+
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 556 AAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVH 615
+ +P Y +SNIYAS W V AR+ +G+ K PG S +EV +
Sbjct: 433 LVSSFKLKDPS---TYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 616 SFVSRDKTHPKALEMYATLKML 637
F + + +HP +++ LK L
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKL 511
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 203/447 (45%), Gaps = 46/447 (10%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
+ L++ A+ L K LHAH++K G L N +++VY KC A ++FDE+P R
Sbjct: 8 HQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR 67
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
+ ++W ++ + N+ + S + + PD F+ L+ +C +I
Sbjct: 68 DHIAWASVLTAL----NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G Q+HC+ + + D V +LVD+YAKCGL+ +A+ F ++ ++ + M+S YA
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 242 NCLPEEAFSMFNLLR--------------MDGANG------------------DEFTFSS 269
+ EEA +F +L + G D SS
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
++ C L G+ H L++ FDS V +++ALI+MYAK ++ A+ +F M R+
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC---GYASAITETLQ 386
VV+W ++IVG +G + L L DM+ G P+E+T I C G+ E Q
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 387 --THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAF 443
T ++ S Q + L+ + G + A + PD TW +L+ A
Sbjct: 364 SMTKDYGIRPSLQHY----TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 444 HGQAEKATEMFEKMLSCGVVPDRVSFL 470
G+ + + + ++S + D +++
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYI 446
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 8/228 (3%)
Query: 271 LSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
L +C K H+ I++ +A+ L+N+Y K + A VFDEM R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 331 VAWNTIIVGCGNYG-DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
+AW +++ G + G PD+ S+ + C +I Q H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
+ + V +SL+ Y+KCG + SA F + ++WT+++ YA G+ E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
A E+F + V + S+ ++S G KGL F++ T + +
Sbjct: 190 ALELFRIL----PVKNLYSWTALISGFVQSG---KGLEAFSVFTEMRR 230
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
+ LC +T HA VKL + +AN+L++ Y KCG + AL+ F D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACAHCGLVTKGLH-YF 489
+ W S++ A + K +F + S + PD F ++ ACA+ G + G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+ + S Y D + LVD+ + GL++ A + S+ V+ +T+ ++ +A
Sbjct: 130 HFIVSEY--ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK---NTI-SWTAMVSGYAK 183
Query: 550 IGLAEWAAEKLFIIEPEKSV 569
G E A E LF I P K++
Sbjct: 184 SGRKEEALE-LFRILPVKNL 202
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 262/548 (47%), Gaps = 12/548 (2%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
N L + F+ +G+ +H K G ++N ++S Y KC E+ A+ LF E+ +
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
+ VSWN MI + + ++ ++ FK M + V VT L+ + V
Sbjct: 216 STVSWNTMIGAYSQSGLQEEA-----ITVFKNMFEKNVEISPVTIINLLSAHVSHE---- 266
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
LHC VK G D V +LV Y++CG + +A R + + +V ++SCYA
Sbjct: 267 --PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAE 324
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
+ A F+ R D +L C + DIG H ++ + LV
Sbjct: 325 KGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLV 384
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREG 360
+ LI MY+K +++ +F+++ +++WN++I GC G S ++ M L G
Sbjct: 385 VNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG 444
Query: 361 FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSAL 420
PD +TI+S ++ C + + H ++ +F+ V +LI Y+KCGN A
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 421 KCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
F+ + P TW S+I Y+ G +A + +M G+ PD ++FLGVLSAC H G
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564
Query: 481 LVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAF 540
V +G F M + I P HY +V LLGR L EA L+ M ++ +S GA
Sbjct: 565 FVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGAL 624
Query: 541 IGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDA 600
+ +C +H + + E+ A K+F+++ + Y MSN+YA++ W DV R M+ D G
Sbjct: 625 LSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Query: 601 KVPGCSWI 608
G S I
Sbjct: 685 GYLGVSQI 692
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 222/503 (44%), Gaps = 28/503 (5%)
Query: 38 LRASVSVPDQTLFRD-------PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCH 90
+ +S T+FRD P+ + ++ +F + +Q+ HL K G
Sbjct: 24 IHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDR 83
Query: 91 VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSY 150
+ ++ +L++YLK + A LFDE+P R+ V WN +I G + E D+
Sbjct: 84 FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA-----WKL 138
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
F ML + P T L+ C Q + G +H K G +LD V AL+ Y+K
Sbjct: 139 FIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSK 198
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
C + +A F + + V N MI Y+ + L EEA ++F + T +L
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 271 LSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
LS + E H L+++ +D+ V ++L+ Y++ + A ++ ++
Sbjct: 259 LSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSI 312
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
V +I+ GD + + D + + + C +S I + H
Sbjct: 313 VGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
A+K V N LI+ YSK ++ + L F +E L++W S+I G+A A
Sbjct: 373 AIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 451 TEMFEK-MLSCGVVPDRVSFLGVLSACAH--CGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
E+F + ML+ G++PD ++ +L+ C+ C + K LH + L + +++++ C
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF-----ENENFVC 487
Query: 508 --LVDLLGRYGLIDEAFELLRSM 528
L+D+ + G +A + +S+
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSI 510
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 326 LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS-----STISLCGYASA 380
L R++ +++++ C + S + + RD+LR +P+ T+S +T S +
Sbjct: 9 LYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
+ E +QTH K F+ V SL++ Y K G +TSA F E D V W +LI
Sbjct: 69 V-EQVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
Y+ +G A ++F ML G P + + +L C CG V++G
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 236/473 (49%), Gaps = 34/473 (7%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
+V Y K G++ AR F ++P RD+V N M+ YA + EA + R G +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD 323
EF+F+ LL+ C + + AH +L F S+V+++ ++I+ YAK + A+ FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 324 EMLIRNVVAWNTIIVGCGNYGD-------------------------------GSEVLKL 352
EM ++++ W T+I G GD G+ L L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
R M+ G P++ T SS + +++ + H ++ + + V +SLI YSK
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 413 CGNITSALKCFRLTEEP-DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
G++ ++ + FR+ ++ D V W ++I A A HG KA M + M+ V P+R + +
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+L+AC+H GLV +GL +F MT + IVPD +HY CL+DLLGR G E + MP E
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESAR 591
+ A +G C++H N L + AA++L ++PE S Y +S+IYA W VE R
Sbjct: 479 PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 592 KMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKAL--EMYATLKMLHVCLD 642
++ + K SWIE+ +V +F D +H A E+Y L L ++
Sbjct: 539 GVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIE 591
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 206/463 (44%), Gaps = 93/463 (20%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSL-QNQILSVYLKCKEIEDADKLFDEL------------- 118
L +GK +H HL GF +L N ++ +Y+KC + DA K+FD++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 119 ------------------PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV 160
P R+VVSWN M+ G A N +++ + ++K +
Sbjct: 122 GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA-----LWFYKEFRRSGIK 176
Query: 161 PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRA 220
+ +F GL+ +CV+ + + Q H + GF + + C+++D YAKCG +E+A+R
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 221 FCAVPCRDLVMCNVMISCYA----------LNC-LPEE--------------------AF 249
F + +D+ + +IS YA L C +PE+ A
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 250 SMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
+F + G ++FTFSS L ++ GK H ++R + +V S+LI+MY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 310 AKNENITDARGVF---DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDEL 366
+K+ ++ + VF D+ + V WNT+I +G G + L++L DM++ P+
Sbjct: 357 SKSGSLEASERVFRICDDK--HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRT 414
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLI---SAYSKCGNITSALKCF 423
T+ ++ C ++ + E L+ + E ++V + ++ Y+ ++ CF
Sbjct: 415 TLVVILNACSHSGLVEEGLR---------WFESMTVQHGIVPDQEHYACLIDLLGRAGCF 465
Query: 424 R--------LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ + EPD W +++ HG E + ++++
Sbjct: 466 KELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI 508
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 68/365 (18%)
Query: 227 RDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA 286
R + + +S +A +A S L G +SLL C + GK
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 287 HSLILRQAFDS-DVLVASALINMYAKNENITDARGVFDEMLIRN---------------- 329
H + F + L+++ LI MY K DA VFD+M +RN
Sbjct: 69 HRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 330 ---------------VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
VV+WNT+++G G+ E L ++ R G +E + + ++
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF----------- 423
C + + Q H + F + ++ S+I AY+KCG + SA +CF
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIW 248
Query: 424 --------RLTE------------EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
+L + E + V+WT+LI Y G +A ++F KM++ GV
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 464 PDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
P++ +F L A A + G +H + + T+V P++ + L+D+ + G ++ +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR---PNAIVISSLIDMYSKSGSLEAS 365
Query: 522 FELLR 526
+ R
Sbjct: 366 ERVFR 370
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
N+++S Y K G + A F E D+V+W +++ YA G +A +++ G+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 464 PDRVSFLGVLSACAHCG--LVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+ SF G+L+AC + + H L+ V S ++D + G ++ A
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLS---CSIIDAYAKCGQMESA 233
Query: 522 FELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKS-VNYAAMSNIYAS 580
M V+ + + +A +G E AAEKLF PEK+ V++ A+ Y
Sbjct: 234 KRCFDEMTVK----DIHIWTTLISGYAKLGDME-AAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 581 Q 581
Q
Sbjct: 289 Q 289
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 241/489 (49%), Gaps = 44/489 (8%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN---ARRAFCAVPCRDLVMCNVMISCYA 240
QLH + ++ G D DL + L+ N AR+ F + N +I Y
Sbjct: 6 QLHAHCLRTGVD-------ETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
++ P E+ ++NLL DG TF+ + + + +L HS R F+SD
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE- 359
+ LI YAK + AR VFDEM R+V WN +I G GD ++L M R+
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 360 ---------GFS----------------------PDELTISSTISLCGYASAITETLQTH 388
GFS P+ +T+ S + C + +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQA 447
A + F + + V N+ I YSKCG I A + F L + +L +W S+I + A HG+
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
++A +F +ML G PD V+F+G+L AC H G+V KG F M V++I P +HY C
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 508 LVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
++DLLGR G + EA++L+++MP++ ++ G +G+C H N+ +AE A+E LF +EP
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 568 SVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW-IEVANQVHSFVSRDKTHPK 626
N MSNIYA+ W V RK++ + K G S+ +EV VH F DK+HP+
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 627 ALEMYATLK 635
+ E+Y L+
Sbjct: 479 SYEIYQVLE 487
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 168/415 (40%), Gaps = 56/415 (13%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
KQLHAH ++ G L ++L + + A KLFD +N +I+
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
++S + + + + + P + TFN + + F + LH + GF+
Sbjct: 61 HQPHES-----IVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA-----------LNCLP 245
D F L+ YAK G + ARR F + RD+ + N MI+ Y + +P
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 246 E--------------------EAFSMFNLLRMDGA-NGDEFTFSSLLSVCDTLEYYDIGK 284
EA MF + D + + T S+L C L +IG+
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM-LIRNVVAWNTIIVGCGNY 343
F ++ V +A I MY+K I A+ +F+E+ RN+ +WN++I +
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETL-------QTHAIAVKLSF 396
G E L L MLREG PD +T + C + + + + H I+ KL
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKA 450
+I + G + A + + +PD V W +L+ A +FHG E A
Sbjct: 356 Y------GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 57 HLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFD 116
H+ + L A L G++L + + GF + + N + +Y KC I+ A +LF+
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 117 ELPG-RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
EL RN+ SWN MI +A +++ ++ F +ML E PD VTF GL+ +CV
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEA-----LTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 176 FHNIGVGIQLHCYTV---KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
+ G +L K+ L+ + GC ++DL + G ++ A +P +
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHY-GC-MIDLLGRVGKLQEAYDLIKTMPMK 382
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 226/403 (56%), Gaps = 1/403 (0%)
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDG-ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
N +I ++ + P + +N + + + D FTF+ L C+ ++ H ++
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK 351
R F D +VA++L+ Y+ N ++ A VFDEM +R++V+WN +I + G ++ L
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
+ + M EG D T+ + +S C + SA+ + H IA + + + V+N+LI Y+
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
KCG++ +A+ F + D++TW S+I Y HG +A F KM++ GV P+ ++FLG
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+L C+H GLV +G+ +F +M+S + + P+ HY C+VDL GR G ++ + E++ +
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 374
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESAR 591
+ +GSCK+H N+ L E A +KL +E + +Y M++IY++ D S R
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 434
Query: 592 KMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
K+I VPG SWIE+ +QVH FV DK HP++ +Y+ L
Sbjct: 435 KLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILS--VYLKCKEIEDADKLFDELPGRNVVS-WNIMIRGV 133
+++H+H+I G H S+ N +L + A LFD S WN +IRG
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 134 AGRDNENDSSAPL-CVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
+ +SS+PL + ++ RMLL V PD TFN + SC + +I +++H ++
Sbjct: 82 S------NSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
GF D V +LV Y+ G VE A + F +P RDLV NVMI C++ L +A SM
Sbjct: 136 SGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSM 195
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
+ + +G GD +T +LLS C + ++G + H + +S V V++ALI+MYAK
Sbjct: 196 YKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
++ +A GVF+ M R+V+ WN++I+G G +G G E + R M+ G P+ +T
Sbjct: 256 CGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGL 315
Query: 372 ISLCGYASAITETLQTHAI-AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE-EP 429
+ C + + E ++ I + + + ++ Y + G + ++L+ +
Sbjct: 316 LLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE 375
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKML 458
D V W +L+ + H E +K++
Sbjct: 376 DPVLWRTLLGSCKIHRNLELGEVAMKKLV 404
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 38/370 (10%)
Query: 18 YSFVAQCFSNSSHQPHP---WSR-LRASVSVPDQTLFRDPDTVHLFCAN-ALKVSAKRAF 72
++++ + FSNSS + ++R L +SVS PD LF N ALK +
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPD-----------LFTFNFALKSCERIKS 122
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
+P+ ++H +I+ GF + ++ Y +E A K+FDE+P R++VSWN+MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+ N + +S +KRM E V D T L+ SC + +G+ LH ++
Sbjct: 183 FSHVGLHNQA-----LSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RI 233
Query: 193 GFDLDC----FVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEA 248
D+ C FV AL+D+YAKCG +ENA F + RD++ N MI Y ++ EA
Sbjct: 234 ACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 249 FSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF--DSDVLVASALI 306
S F + G + TF LL C G + H I+ F +V ++
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG-VEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 307 NMYAKNENITDA-RGVFDEMLIRNVVAWNTIIVGCG---NYGDGSEVLKLLRDMLREGFS 362
++Y + + ++ ++ + V W T++ C N G +K L + E F+
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL--EAFN 410
Query: 363 PDELTISSTI 372
+ + ++I
Sbjct: 411 AGDYVLMTSI 420
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 258/534 (48%), Gaps = 59/534 (11%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA--GRDNENDSSAPLCVSYFKRML 155
++S YL+ K++ A+ LF E+P RNVVSWN MI G A GR ++ + F M
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK-------ALELFDEMP 167
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
+V ++N ++ + VQ I + L + D A+VD AK G V+
Sbjct: 168 ERNIV----SWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVD 219
Query: 216 NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD 275
ARR F +P R+++ N MI+ YA N +EA +F ++ E F+S
Sbjct: 220 EARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM-------PERDFASW----- 267
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT 335
+ +I + +N + A G+FD M +NV++W T
Sbjct: 268 ---------------------------NTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 336 IIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+I G + E L + MLR+G P+ T S +S C + + E Q H + K
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFR--LTEEPDLVTWTSLIHAYAFHGQAEKATE 452
Q+ V ++L++ YSK G + +A K F L + DL++W S+I YA HG ++A E
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
M+ +M G P V++L +L AC+H GLV KG+ +F + + +HYTCLVDL
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 513 GRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYA 572
GR G + + + + GA + +C +H + +A+ +K+ + + Y
Sbjct: 481 GRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYV 540
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
MSNIYA+ + R + +KG K PGCSW++V Q H FV DK+HP+
Sbjct: 541 LMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ 594
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++ ++ I++A LF+ +P R+VVSW M+ G+A ++ + D + L +R
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLA-KNGKVDEARRLFDCMPER-- 231
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALV---DLYAKCG 212
+ +++N +I Q + I QL + F + + ++ CG
Sbjct: 232 ------NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA-NGDEFTFSSLL 271
L F +P ++++ MI+ Y N EEA ++F+ + DG+ + T+ S+L
Sbjct: 286 L-------FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI--RN 329
S C L G+ H LI + + +V SAL+NMY+K+ + AR +FD L+ R+
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
+++WN++I ++G G E +++ M + GF P +T + + C +A + + ++
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 390 IAVKLS----FQEFLSVANSLISAYSKCGNITSALKC--FRLTEEPDLVTWTSLIHAYAF 443
V+ +E + L + ++T+ + C RL+ + +++ A
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRS----FYGAILSACNV 514
Query: 444 HGQAEKATEMFEKMLSCG 461
H + A E+ +K+L G
Sbjct: 515 HNEVSIAKEVVKKVLETG 532
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 150/318 (47%), Gaps = 42/318 (13%)
Query: 210 KCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSS 269
K G + AR+ F +P RD+V +I+ Y EA +F+ R+D + + T+++
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD--RVD-SRKNVVTWTA 114
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAF-DSDVLVASALINMYAKNENITDARGVFDEMLIR 328
++S Y +L+ + +L Q + +V+ + +I+ YA++ I A +FDEM R
Sbjct: 115 MVS-----GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLR----------EGFS---------------P 363
N+V+WN+++ G E + L M R +G + P
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 364 DELTISSTISLCGYA--SAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
+ IS + GYA + I E Q + + F + N++I+ + + + A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASW----NTMITGFIRNREMNKACG 285
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACAHCG 480
F E ++++WT++I Y + + E+A +F KML G V P+ +++ +LSAC+
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 481 LVTKGLHYFNLMT-SVYQ 497
+ +G L++ SV+Q
Sbjct: 346 GLVEGQQIHQLISKSVHQ 363
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
LI K I +AR +FD + R+VV W +I G GD E RE F
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA--------RELFD-- 101
Query: 365 ELTISSTISLCGYASAITETLQTHAIAV-KLSFQEF----LSVANSLISAYSKCGNITSA 419
+ S ++ + + ++ L++ +++ ++ FQE + N++I Y++ G I A
Sbjct: 102 --RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHC 479
L+ F E ++V+W S++ A G+ ++A +FE+M D VS+ ++ A
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKN 215
Query: 480 GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD---- 535
G V + F+ M I + ++ + IDEA +L + MP E D
Sbjct: 216 GKVDEARRLFDCMPERNII-----SWNAMITGYAQNNRIDEADQLFQVMP---ERDFASW 267
Query: 536 --TLGAFIGSCKLHANIGLAEWAAEKLFI 562
+ FI + +++ GL + EK I
Sbjct: 268 NTMITGFIRNREMNKACGLFDRMPEKNVI 296
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 237/473 (50%), Gaps = 39/473 (8%)
Query: 213 LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
L+ NA + F +P D++ +I + EA F L G +EFTF +++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 273 VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE-------- 324
T +GK H L+ S+V V SA++N Y K +TDAR FD+
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 325 -----------------------MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
M R+VV WN +I G G E + DMLREG
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 362 S-PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF-LSVANSLISAYSKCGNITSA 419
P+E T I+ ++ HA A+K + F + V NSLIS YSKCGN+ +
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 420 LKCFRLTEEP--DLVTWTSLIHAYAFHGQAEKATEMFEKMLS-CGVVPDRVSFLGVLSAC 476
L F EE ++V+W S+I YA +G+ E+A MFEKM+ + P+ V+ LGVL AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 477 AHCGLVTKGLHYFNLMTSVYQ--IVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVES 534
H GL+ +G YFN + Y + + +HY C+VD+L R G EA EL++SMP++
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 535 DTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMI 594
A +G C++H+N LA+ AA K+ ++P +Y +SN Y++ +W +V R+ +
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 595 GDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVCL-DTSCW 646
+ G + GCSWIEV +Q+ FV+ DK + E+Y L ++ L + CW
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENECW 514
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 175/397 (44%), Gaps = 57/397 (14%)
Query: 108 IEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFN 167
I +A K+FDE+P +V+S +I ++S FKR+L + P+ TF
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQA-----FKRLLCLGIRPNEFTFG 97
Query: 168 GLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR-------- 219
+IGS ++ +G QLHCY +K+G + FVG A+++ Y K + +ARR
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDP 157
Query: 220 -----------------------AFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLL 255
F A+P R +V N +I ++ EEA + F ++L
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR---QAFDSDVLVASALINMYAKN 312
R +E TF ++ + + GK H+ ++ + F +V V ++LI+ Y+K
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF--NVFVWNSLISFYSKC 275
Query: 313 ENITDARGVFD--EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTIS 369
N+ D+ F+ E RN+V+WN++I G + G G E + + M+++ P+ +TI
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
Query: 370 STISLCGYASAITETLQTHAIAVK-------LSFQEFLSVANSLISAYSKCGNITSALKC 422
+ C +A I E AV L + + + + L S+ G A +
Sbjct: 336 GVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDML----SRSGRFKEAEEL 391
Query: 423 FR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ + +P + W +L+ H A K+L
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKIL 428
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 19/262 (7%)
Query: 90 HVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA--GRDNENDSSAPLC 147
+V+S+ N ++S YLK E E+A LF +P R+VV+WN +I G + GR+ E
Sbjct: 158 NVVSITN-LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE-------A 209
Query: 148 VSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK-VGFDLDCFVGCALV 205
V+ F ML E VV P+ TF I + + G G +H +K +G + FV +L+
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
Query: 206 DLYAKCGLVENARRAFCAV--PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD-GANG 262
Y+KCG +E++ AF + R++V N MI YA N EEA +MF + D
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 263 DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA---SALINMYAKNENITDAR 319
+ T +L C+ G + + + D ++L + +++M +++ +A
Sbjct: 330 NNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAE 389
Query: 320 GVFDEM-LIRNVVAWNTIIVGC 340
+ M L + W ++ GC
Sbjct: 390 ELIKSMPLDPGIGFWKALLGGC 411
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 237/452 (52%), Gaps = 6/452 (1%)
Query: 161 PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRA 220
PD TF + +C +F I G Q+H K+GF D +V +LV Y CG NA +
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 221 FCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
F +P RD+V +I+ + L +EA F+ +MD + T+ +L +
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFS--KMD-VEPNLATYVCVLVSSGRVGCL 220
Query: 281 DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC 340
+GK H LIL++A + +ALI+MY K E ++DA VF E+ ++ V+WN++I G
Sbjct: 221 SLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGL 280
Query: 341 GNYGDGSEVLKLLRDM-LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
+ E + L M G PD ++S +S C A+ H + +
Sbjct: 281 VHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD 340
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ +++ Y+KCG I +AL+ F ++ TW +L+ A HG ++ FE+M+
Sbjct: 341 THIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV-YQIVPDSDHYTCLVDLLGRYGLI 518
G P+ V+FL L+AC H GLV +G YF+ M S Y + P +HY C++DLL R GL+
Sbjct: 401 LGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLL 460
Query: 519 DEAFELLRSMPVEVESDTLGAFIGSCKLHANI-GLAEWAAEKLFIIEPEKSVNYAAMSNI 577
DEA EL+++MPV+ + GA + +CK + L + + IE E S Y +SNI
Sbjct: 461 DEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNI 520
Query: 578 YASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+A+ R W DV R+++ KG +KVPG S+IE
Sbjct: 521 FAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 159/321 (49%), Gaps = 9/321 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
K K + + EGKQ+H + K GF + +QN ++ Y C E +A K+F E+P R+V
Sbjct: 113 FKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDV 172
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSW +I G ++ + F +M +E P+ T+ ++ S + + +G
Sbjct: 173 VSWTGIITGFTRTGLYKEA-----LDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGK 224
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+H +K + G AL+D+Y KC + +A R F + +D V N MIS
Sbjct: 225 GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 244 LPEEAFSMFNLLRM-DGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
+EA +F+L++ G D +S+LS C +L D G+ H IL D +
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+A+++MYAK I A +F+ + +NV WN ++ G +G G E L+ +M++ GF
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 363 PDELTISSTISLCGYASAITE 383
P+ +T + ++ C + + E
Sbjct: 405 PNLVTFLAALNACCHTGLVDE 425
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 10/320 (3%)
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
N ++S YA+ P + +G + D FTF + C GK H ++ +
Sbjct: 75 NTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTK 134
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
F D+ V ++L++ Y +A VF EM +R+VV+W II G G E L
Sbjct: 135 MGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDT 194
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
M E P+ T + G ++ H + +K + L N+LI Y K
Sbjct: 195 FSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVK 251
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM-LSCGVVPDRVSFLG 471
C ++ A++ F E+ D V+W S+I ++++A ++F M S G+ PD
Sbjct: 252 CEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTS 311
Query: 472 VLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
VLSACA G V G +H + L + D+ T +VD+ + G I+ A E+ +
Sbjct: 312 VLSACASLGAVDHGRWVHEYILTAGIKW---DTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 530 VEVESDTLGAFIGSCKLHAN 549
+ T A +G +H +
Sbjct: 369 SK-NVFTWNALLGGLAIHGH 387
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
+ L A + G+ +H +++ G + I+ +Y KC IE A ++F+ +
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+NV +WN ++ G+A + +S + YF+ M+ P+ VTF + +C +
Sbjct: 370 KNVFTWNALLGGLAIHGHGLES-----LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 181 VGIQLHCYTVKVGFDLDCFV---GCALVDLYAKCGLVENARRAFCAVPCR-DLVMCNVMI 236
G + ++L + GC ++DL + GL++ A A+P + D+ +C ++
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGC-MIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 237 SC----YALNCLPEEAFSMF 252
S L LP+E F
Sbjct: 484 SACKNRGTLMELPKEILDSF 503
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 258/533 (48%), Gaps = 8/533 (1%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
++LH+ + K Q+ Y ++ A KLFD P R+V WN +IR A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA-- 82
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI-GSCVQFHNIGVGIQLHCYTVKVGFD 195
+S F ++L PD T+ L G F G+ +H + G
Sbjct: 83 ---KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRC-IHGIAIVSGLG 138
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D G A+V Y+K GL+ A + FC++P DL + NVMI Y ++ ++FNL+
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+ G + +T +L S + H+ L+ DS V AL+NMY++ I
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
A VF+ + ++VA +++I G G+ E L L ++ G PD + ++ + C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
S + H+ ++L + + V ++LI YSKCG + A+ F E ++V++
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
SLI HG A A E F ++L G++PD ++F +L C H GL+ KG F M S
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEW 555
+ I P ++HY +V L+G G ++EAFE + S+ ++S LGA + C++H N LAE
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 556 AAEKLFII-EPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
AE + E +SV +SN+YA W +VE R I + K+PG SW
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 28/245 (11%)
Query: 30 HQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFC 89
HQP+ ++ + + + D +L +VH FC LK++ L +H + C
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFC---LKIN-----------LDSH--SYVGC 246
Query: 90 HVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
++++Y +C I A +F+ + ++V+ + +I G + N ++ +
Sbjct: 247 -------ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEA-----LH 294
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
F + + PD V ++GSC + + G ++H Y +++G +LD V AL+D+Y+
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 210 KCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSS 269
KCGL++ A F +P +++V N +I L+ AF F + G DE TFS+
Sbjct: 355 KCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSA 414
Query: 270 LLSVC 274
LL C
Sbjct: 415 LLCTC 419
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 27 NSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKF 86
N H ++ LR S PD L A L A+ + GK++H+++I+
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLV----------AIVLGSCAELSDSVSGKEVHSYVIRL 337
Query: 87 GFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPL 146
G + + + ++ +Y KC ++ A LF +P +N+VS+N +I G+ A
Sbjct: 338 GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLH-----GFAST 392
Query: 147 CVSYFKRMLLEKVVPDYVTFNGLIGSC 173
F +L ++PD +TF+ L+ +C
Sbjct: 393 AFEKFTEILEMGLIPDEITFSALLCTC 419
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 273/550 (49%), Gaps = 46/550 (8%)
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL 185
+N M++ +A + S ++ F + + + PD T ++ S + + G ++
Sbjct: 14 YNKMLKSLA-----DGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP 245
H Y VK G + D +V +L+ +YA G +E + F +P RD+V N +IS Y N
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 246 EEAFSMFNLLRMDGA-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
E+A +F + + DE T S LS C L+ +IG+ + ++ + F+ V + +A
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNA 187
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG-------------------- 344
L++M+ K + AR VFD M +NV W +++ G + G
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 345 ----DG-------SEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
+G E L+L R M G PD + S ++ C A+ + H +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
V +L+ Y+KCG I +AL+ F +E D +WTSLI+ A +G + +A ++
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
+ +M + GV D ++F+ VL+AC H G V +G F+ MT + + P S+H +CL+DLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAF---IGSCKLHANIGLAEWAAEKLFIIEPEKSVN 570
R GL+DEA EL+ M E + + + + + + + N+ +AE AEKL +E S
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 571 YAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDK--THPKAL 628
+ ++++YAS W DV + R+ + D G K PGCS IE+ H F+ D +HPK
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 629 EMYATLKMLH 638
E+ + MLH
Sbjct: 548 EINS---MLH 554
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 186/423 (43%), Gaps = 46/423 (10%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
EG+++H + +K G + N ++ +Y +IE K+FDE+P R+VVSWN +I
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVP-DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
G D+ + FKRM E + D T + +C N+ +G +++ + V
Sbjct: 124 GNGRFEDA-----IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TE 177
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAV----------------------------- 224
F++ +G ALVD++ KCG ++ AR F ++
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 225 --PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
P +D+V+ M++ Y +EA +F ++ G D F SLL+ C +
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
GK H I D +V +AL++MYAK I A VF E+ R+ +W ++I G
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLS 401
G L L +M G D +T + ++ C + + E + H++ + + Q
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 402 VANSLISAYSKCGNITSALKCF-RLTEEPD---LVTWTSLIHAYAFHGQ---AEKATEMF 454
+ LI + G + A + ++ E D + + SL+ A +G AE+ E
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 455 EKM 457
EK+
Sbjct: 478 EKV 480
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 283/598 (47%), Gaps = 91/598 (15%)
Query: 109 EDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNG 168
EDA +LFDE+P RNVVSWN ++ G+ R+ + + + + + R D V++N
Sbjct: 155 EDAVELFDEMPERNVVSWNTLVTGLI-RNGDMEKAKQVFDAMPSR--------DVVSWNA 205
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
+I ++ G++ + + ++V Y + G V A R FC +P R+
Sbjct: 206 MIKGYIEND----GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMD----GANGDEFTFSSLLSVCDTL--EYYDI 282
+V MIS +A N L EA +F ++ D NG+ T SL C L E+ +
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE--TLISLAYACGGLGVEFRRL 319
Query: 283 GKLAHSLILRQAFD-----------------SDVLVASA---------------LINMYA 310
G+ H+ ++ ++ S L+ASA +IN Y
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYL 379
Query: 311 KNENITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGS---------------------- 347
KN ++ A +F+ + + + V+W ++I G GD S
Sbjct: 380 KNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
Query: 348 ---------EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLS--F 396
E LL DM+R G P T S +S G S + + H + K + +
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
L + NSL+S Y+KCG I A + F + D V+W S+I + HG A+KA +F++
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 559
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
ML G P+ V+FLGVLSAC+H GL+T+GL F M Y I P DHY ++DLLGR G
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAG 619
Query: 517 LIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN----IGLAEWAAEKLFIIEPEKSVNYA 572
+ EA E + ++P + GA +G C L+ G+AE AA +L ++P + +
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEM 630
A+ N+YA + RK +G KG K PGCSW+ V + + F+S DK+ +A +M
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 164/392 (41%), Gaps = 82/392 (20%)
Query: 203 ALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
+L+ YAK G ++ AR F +P R++V CN M++ Y EA+++F R N
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF---REMPKNV 138
Query: 263 DEFTFSSLLSVCD------TLEYYD---------IGKLAHSLI-------LRQAFDS--- 297
+T L ++CD +E +D L LI +Q FD+
Sbjct: 139 VSWTVM-LTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS 197
Query: 298 -DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLL--- 353
DV+ +A+I Y +N+ + +A+ +F +M +NVV W +++ G YGD E +L
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 354 -----------------RDMLREGF-------------SPDELTISSTISLCGYASAITE 383
++ RE SP+ T+ S CG
Sbjct: 258 PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 384 TL--QTHAIAVKLSFQEF---LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLI 438
L Q HA + ++ +A SL+ Y+ G I SA L E DL + +I
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL--LNESFDLQSCNIII 375
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
+ Y +G E+A +FE++ S + D+VS+ ++ G V++ F Q
Sbjct: 376 NRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLF-------QK 425
Query: 499 VPDSDH--YTCLVDLLGRYGLIDEAFELLRSM 528
+ D D +T ++ L + L EA LL M
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 56 VHLFCANALKVSAKRAFLPEGKQLHA------HLIKFG--------FCHVLSLQNQI--- 98
VH++ ++ L SA+ + L E L + +K G F V SL +++
Sbjct: 346 VHMYASSGLIASAQ-SLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 99 --LSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL 156
+ YL+ ++ A LF +L ++ V+W +MI G+ NE + A +S R L
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLV--QNELFAEAASLLSDMVRCGL 462
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG--FDLDCFVGCALVDLYAKCGLV 214
+ P T++ L+ S N+ G +HC K +D D + +LV +YAKCG +
Sbjct: 463 K---PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
E+A F + +D V N MI + + L ++A ++F + G + TF +LS C
Sbjct: 520 EDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSAC 579
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 73 LPEGKQLHAHLIKFGFCHV--LSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
L +GK +H + K C+ L LQN ++S+Y KC IEDA ++F ++ ++ VSWN MI
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL----- 185
G++ + A ++ FK ML P+ VTF G++ +C I G++L
Sbjct: 542 MGLS-----HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
Y+++ G +D ++ +++DL + G ++ A A+P
Sbjct: 597 ETYSIQPG--IDHYI--SMIDLLGRAGKLKEAEEFISALP 632
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 215/407 (52%), Gaps = 4/407 (0%)
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
N MI Y EEA +N + G D FT+ LL C L+ GK H + +
Sbjct: 101 NTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFK 160
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
++DV V ++LINMY + + + VF+++ + +W++++ G SE L L
Sbjct: 161 LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLL 220
Query: 353 LRDMLRE-GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
R M E +E + S + C A+ + H ++ + + V SL+ Y
Sbjct: 221 FRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYV 280
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
KCG + AL F+ E+ + +T++++I A HG+ E A MF KM+ G+ PD V ++
Sbjct: 281 KCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVS 340
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
VL+AC+H GLV +G F M ++ P ++HY CLVDLLGR GL++EA E ++S+P+E
Sbjct: 341 VLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIE 400
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESAR 591
F+ C++ NI L + AA++L + +Y +SN+Y+ + W DV R
Sbjct: 401 KNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTR 460
Query: 592 KMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLH 638
I KG + PG S +E+ + H FVS+D++HPK E+Y KMLH
Sbjct: 461 TEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIY---KMLH 504
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 14/328 (4%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKC------KEIEDADKLFDELPGRNVVSW 126
+ E KQ+HA IK S SV KC + A +F + +
Sbjct: 43 IDEFKQVHARFIKLSL--FYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDF 100
Query: 127 NIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH 186
N MIRG N S + ++ M+ PD T+ L+ +C + +I G Q+H
Sbjct: 101 NTMIRGYV-----NVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
K+G + D FV +L+++Y +CG +E + F + + + M+S A +
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 247 EAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
E +F + +E S L C ++G H +LR + +++V ++L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
++MY K + A +F +M RN + ++ +I G +G+G L++ M++EG PD
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 366 LTISSTISLCGYASAITETLQTHAIAVK 393
+ S ++ C ++ + E + A +K
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 138/294 (46%), Gaps = 14/294 (4%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD C LK + + EGKQ+H + K G + +QN ++++Y +C E+E +
Sbjct: 129 EPDNFTYPCL--LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELS 186
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
+F++L + SW+ M+ AG ++ C+ F+ M E + +G++
Sbjct: 187 SAVFEKLESKTAASWSSMVSARAGMGMWSE-----CLLLFRGMCSETNLK--AEESGMVS 239
Query: 172 SCVQFHNIG---VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
+ + N G +G+ +H + ++ +L+ V +LVD+Y KCG ++ A F + R+
Sbjct: 240 ALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRN 299
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+ + MIS AL+ E A MF+ + +G D + S+L+ C G+ +
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFA 359
Query: 289 LILRQA-FDSDVLVASALINMYAKNENITDARGVFDEMLI-RNVVAWNTIIVGC 340
+L++ + L+++ + + +A + I +N V W T + C
Sbjct: 360 EMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 176/650 (27%), Positives = 286/650 (44%), Gaps = 118/650 (18%)
Query: 77 KQLHAHLIKFGF-CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
+Q + L+K GF ++ + N +L +Y + ++ A LFDE+P RN SWN MI G
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 136 RDNENDS-------------SAPLCVSYF---------KRMLLEKVVPDYVTFNGL---- 169
+ S S + VS F +R+ D VT N L
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY 165
Query: 170 ----------------------------IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG 201
+ +C + + G Q+H + G + D +
Sbjct: 166 ILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 202 CALVDLYAK-------------------------------CGLVENARRAFCAVPCRDLV 230
+LV++YAK CG V +R F R ++
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+ N MIS Y N + EA +FN +R + D T +++++ C L + + GK H
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 291 LRQAFDSDVLVASALINMYAK-----------NE--------------------NITDAR 319
+ D++VAS L++MY+K +E I DA+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
VF+ + +++++WN++ G G E L+ M + DE+++SS IS C S
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 380 AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIH 439
++ Q A A + V++SLI Y KCG + + F + D V W S+I
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 440 AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIV 499
YA +GQ +A ++F+KM G+ P +++F+ VL+AC +CGLV +G F M + V
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 500 PDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEK 559
PD +H++C+VDLL R G ++EA L+ MP +V+ + + C + + + AAEK
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 560 LFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ +EPE SV Y +S I+A+ DW RK++ + K PG SW +
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 194/456 (42%), Gaps = 64/456 (14%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A+ L GKQ+HA ++ G + + +++VY KC ++ A + +++ +
Sbjct: 194 LKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDD 253
Query: 124 VSWNIMIRGVA--GRDNEN----DSSAPLCVSYFKRML---------LEKVV-------- 160
S + +I G A GR NE+ D + CV + M+ +E +V
Sbjct: 254 HSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE 313
Query: 161 --PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK-------- 210
D T +I +C+ + G Q+HC+ K G D V L+D+Y+K
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEAC 373
Query: 211 -----------------------CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
CG +++A+R F + + L+ N M + ++ N E
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
F+ + DE + SS++S C ++ ++G+ + DSD +V+S+LI+
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLID 493
Query: 308 MYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
+Y K + R VFD M+ + V WN++I G G G E + L + M G P ++T
Sbjct: 494 LYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 368 ISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
++ C Y + E + ++ V F + ++ ++ G + A+ L
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN---LV 610
Query: 427 EE----PDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
EE D W+S++ +G + EK++
Sbjct: 611 EEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKII 646
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 62/293 (21%)
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLILRQAF-DSDVLVASALINMYAKNENITDARGVFDEM 325
+ LL C + + + + L+L++ F S V+VA+ L+ MY+++ + AR +FDEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 326 LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML--REGFSPDELTISSTISLCGYASAITE 383
RN +WNT+I G N G+ L+ DM+ R+G+S
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPERDGYS--------------------- 126
Query: 384 TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAF 443
N ++S ++K G ++ A + F E D+VT SL+H Y
Sbjct: 127 -------------------WNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 444 HGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH-----CGLVTKGLHYFNLMTSVYQI 498
+G AE+A +F+++ D ++ VL ACA CG K +H L+ V
Sbjct: 168 NGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCG---KQIHAQILIGGVE-- 219
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
DS + LV++ + G + A +L + E + +L A I +AN G
Sbjct: 220 -CDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISG---YANCG 267
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
D T + ++ + A + L G+Q+ A G + + ++ +Y KC +E
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
++FD + + V WN MI G A + + FK+M + + P +TF ++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYA-----TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Query: 172 SCVQFHNIGVGIQL-HCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
+C + G +L V GF D +VDL A+ G VE A
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 224/419 (53%), Gaps = 3/419 (0%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNV---MISCYALNCLPEEAFSMFNLLRMDGA 260
L+ L++ C ++ AR+ F V L+ V M Y+ N P +A ++ +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
F+ S L C L+ +G+ H+ I+++ D +V + L+ +Y ++ DAR
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
VFD M RNVV WN++I E+ L R M E T+++ + C +A
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
+ + HA +K + + + NSL+ Y KCG + + + F + DL +W +++
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
YA +G E+ +FE M+ GV PD ++F+ +LS C+ GL GL F M + +++ P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKL 560
+HY CLVD+LGR G I EA +++ +MP + + G+ + SC+LH N+ + E AA++L
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 561 FIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVS 619
F++EP NY +SNIYA + W +V+ R+M+ +G K GCSW++V +++ FV+
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 178/379 (46%), Gaps = 24/379 (6%)
Query: 90 HVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVS---WNIMIRGVAGRDNENDSSAPL 146
H L +++++++ C+ ++ A K+FD++ ++++ W M G + + D+
Sbjct: 165 HNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDA---- 220
Query: 147 CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVD 206
+ + ML + P + + + +CV ++ VG +H VK +D V L+
Sbjct: 221 -LIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLK 279
Query: 207 LYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFT 266
LY + GL ++AR+ F + R++V N +IS + E F++F ++ + T
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
+++L C + GK H+ IL+ DV + ++L++MY K + +R VFD ML
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 327 IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG------YASA 380
+++ +WN ++ G+ EV+ L M+ G +PD +T + +S C Y +
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIH 439
+ E ++T V + + + L+ + G I A+K + +P W SL++
Sbjct: 460 LFERMKTE-FRVSPALEHYA----CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 440 AYAFHGQAE----KATEMF 454
+ HG A E+F
Sbjct: 515 SCRLHGNVSVGEIAAKELF 533
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L ++ A L GK++HA ++K + L N ++ +Y KC E+E + ++FD + +++
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
SWNIM+ A N + ++ F+ M+ V PD +TF L+ C G+
Sbjct: 404 ASWNIMLNCYAINGNIEE-----VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 184 QLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARRAFCAVPCR 227
L +K F + + LVD+ + G ++ A + +P +
Sbjct: 459 SLF-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFK 503
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/617 (28%), Positives = 285/617 (46%), Gaps = 83/617 (13%)
Query: 90 HVLSLQNQILSVYLKCK-EIEDADKLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPL 146
V + N +++ +K K ++ A +LF ++P +N VS+ MI G AGR +E +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE----- 164
Query: 147 CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IGVGIQLHCYTVKVGFDLDCFVGCA-L 204
L P V F + S V + G V G + V C+ +
Sbjct: 165 --------FLYAETP--VKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 205 VDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG-ANGD 263
V Y K G + +AR F + R+++ MI Y E+ F +F +R +G +
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVN 274
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK------------ 311
T + + C Y G H L+ R + D+ + ++L++MY+K
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFG 334
Query: 312 -------------------NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
+ I++A +F++M +++V+W +I G G+ S+ ++L
Sbjct: 335 VMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 353 L-------------------------------RDMLREGFSPDELTISSTISLCGYASAI 381
ML++ P+ T SS +S + +
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAY 441
E LQ H VK++ LSV NSL+S Y KCGN A K F EP++V++ ++I Y
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 442 AFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
+++G +KA ++F + S G P+ V+FL +LSAC H G V G YF M S Y I P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
DHY C+VDLLGR GL+D+A L+ +MP + S G+ + + K H + LAE AA+KL
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI 634
Query: 562 IIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRD 621
+EP+ + Y +S +Y+ D + + K K PG SWI + +VH+F++ D
Sbjct: 635 ELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
Query: 622 KTHPKALEMYATLKMLH 638
++ E+ TLKM+
Sbjct: 695 ESQLNLEEIGFTLKMIR 711
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
++ L +A A L EG Q+H ++K + LS+QN ++S+Y KC DA K+F +
Sbjct: 442 SSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE 501
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
N+VS+N MI G + + + F + P+ VTF L+ +CV +
Sbjct: 502 PNIVSYNTMISGYS-----YNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
Query: 181 VGIQL-----HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
+G + Y ++ G D C +VDL + GL+++A +PC+
Sbjct: 557 LGWKYFKSMKSSYNIEPGPD---HYAC-MVDLLGRSGLLDDASNLISTMPCK 604
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 130/293 (44%), Gaps = 25/293 (8%)
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG-CGNYGDGSE 348
I RQ + ++ A+I+ YA+N ++ A VFDEM +R ++N +I N D +
Sbjct: 72 IFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGK 131
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASA--ITETLQTHAIAVKLSFQEFLSVANSL 406
+L D+ P++ +S + G+ A E +A + F++ ++ +N L
Sbjct: 132 AYELFCDI------PEKNAVSYATMITGFVRAGRFDEAEFLYA-ETPVKFRDSVA-SNVL 183
Query: 407 ISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
+S Y + G A++ F+ ++V+ +S++H Y G+ A +F++M V
Sbjct: 184 LSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV---- 239
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDL---LGRYGLIDEAFE 523
+++ ++ G G F M + +S+ + RY +
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 524 LLRSMPVEVESDTLGAFIGSC--KLHANIGLAEWAAEKLFIIEPEKSVNYAAM 574
L+ MP+E + F+G+ +++ +G A +++ + SV++ ++
Sbjct: 300 LVSRMPLEFD-----LFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 228/436 (52%), Gaps = 9/436 (2%)
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
F L+ +C I G+++H + + LV LYA CG E A F +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 226 CRD--LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIG 283
RD N +IS YA E+A +++ + DG D FTF +L C + IG
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
+ H ++++ F DV V +AL+ MYAK +I AR VFD + ++ V+WN+++ G ++
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
G E L + R M++ G PD++ ISS ++ + Q H ++ + LSVA
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARV---LSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
N+LI YSK G + A F E D V+W ++I A H + + FE+M
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAK 388
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
PD ++F+ VLS CA+ G+V G F+LM+ Y I P +HY C+V+L GR G+++EA+
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 524 LL-RSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQR 582
++ + M +E GA + +C LH N + E AA++LF +EP+ N+ + IY+ +
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 583 DWCDVESARKMIGDKG 598
DVE R+M+ D+G
Sbjct: 509 RAEDVERVRQMMVDRG 524
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 186/393 (47%), Gaps = 28/393 (7%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV--VSWNIMIRGV 133
G ++H + + + L + ++++ +Y C E A ++FD + R+ +WN +I G
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
A D+ A YF+ M + V PD TF ++ +C ++ +G +H VK G
Sbjct: 171 AELGQYEDAMA----LYFQ-MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
F D +V ALV +YAKCG + AR F +P +D V N M++ Y + L EA +F
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
L+ +G D+ SS+L+ + ++ G+ H ++R+ + ++ VA+ALI +Y+K
Sbjct: 286 LMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRG 342
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS 373
+ A +FD+ML R+ V+WN II +G LK M R PD +T S +S
Sbjct: 343 QLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLS 399
Query: 374 LCGYASAITE-----TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF--RLT 426
LC + + +L + + + + + N Y + G + A +
Sbjct: 400 LCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN----LYGRAGMMEEAYSMIVQEMG 455
Query: 427 EEPDLVTWTSLIHAYAFHGQAE----KATEMFE 455
E W +L++A HG + A +FE
Sbjct: 456 LEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 229/464 (49%), Gaps = 38/464 (8%)
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G ++H +K GF D + L+ L+ KCG + AR+ F +P L N MIS Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDT-----LEYYDIGKLAHSLILRQAFD 296
+ L +E + + G D +T S +L ++ + + +L H+ I++ +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG---DGSEVLKLL 353
D ++ +AL++ Y K+ + AR VF+ M NVV ++I G N G D E+
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 354 R-----------------------------DMLREGFSPDELTISSTISLCGYASAITET 384
+ M R GF P+ T +S I C ++
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
Q HA +K + + +SL+ Y+KCG I A + F +E ++ +WTS+I Y +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
G E+A E+F +M + P+ V+FLG LSAC+H GLV KG F M Y + P +H
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 505 YTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIE 564
Y C+VDL+GR G +++AFE R+MP +SD A + SC LH N+ LA AA +LF +
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 565 PEKSVN-YAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
+K Y A+SN+YAS W +V R+++ + +K G SW
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE 157
++S Y+ +EDA+++F+ +++V +N M+ G + R E +A V + M
Sbjct: 212 MISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFS-RSGE---TAKRSVDMYISMQRA 267
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
P+ TF +IG+C + VG Q+H +K G +G +L+D+YAKCG + +A
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
RR F + +++ MI Y N PEEA +F ++ + TF LS C
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 278 EYYDIG 283
D G
Sbjct: 388 GLVDKG 393
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 47/267 (17%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+Q+HA ++K G + + + +L +Y KC I DA ++FD++ +NV SW MI G
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
N ++ + F RM ++ P+YVTF G + +C H V G++
Sbjct: 352 NGNPEEA-----LELFTRMKEFRIEPNYVTFLGALSACS-----------HSGLVDKGYE 395
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC--NVMISCYALNCLPEEAFSMFN 253
+ E+ +R + P + C ++M LN F
Sbjct: 396 -----------------IFESMQRDYSMKPKMEHYACIVDLMGRAGDLN-------KAFE 431
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN- 312
R D +++LLS C+ ++ +A S + + D AL N+YA N
Sbjct: 432 FARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASND 491
Query: 313 --ENITDARGVFDEMLIRNVV--AWNT 335
+N++ R V I + +W +
Sbjct: 492 KWDNVSKIREVMKRRRISKTIGRSWTS 518
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 230/458 (50%), Gaps = 4/458 (0%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
Q+H + + G+ + L+ L + F +VP D + N +I +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
LP + + + + +TF+S++ C L IGK H + F D V +
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
AL+ Y+K ++ AR VFD M +++VAWN+++ G G E +++ M GF P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D T S +S C A++ H + + + +LI+ YS+CG++ A + F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS-CGVVPDRVSFLGVLSACAHCGLV 482
+E ++ WT++I AY HG ++A E+F KM CG +P+ V+F+ VLSACAH GLV
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 483 TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLG---A 539
+G + MT Y+++P +H+ C+VD+LGR G +DEA++ + + ++ A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 540 FIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD 599
+G+CK+H N L A++L +EP+ ++ +SNIYA +V R +
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 600 AKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
K G S IEV N+ + F D++H + E+Y L+ L
Sbjct: 447 RKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 237/514 (46%), Gaps = 54/514 (10%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+Q+HAHLI G+ SL +++++ + I LF +P + +N +I+ +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS-- 83
Query: 137 DNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
PL CV+Y++RML V P TF +I SC + +G +HC+ V GF
Sbjct: 84 ----KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
LD +V ALV Y+KCG +E AR+ F +P + +V N ++S + N L +EA +F +
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
R G D TF SLLS C +G H I+ + D +V + +ALIN+Y++ ++
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTISSTISL 374
AR VFD+M NV AW +I G +G G + ++L M + G P+ +T + +S
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANS--LISAYSKCGNITSALKCFRLTEEPDLV 432
C +A + E + K S++ V + ++ + G + A K +
Sbjct: 320 CAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 433 T----WTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
T WT+++ A H + E+ +++++ + PD G H
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGVEIAKRLIA--LEPD-----------------NPGHHV 419
Query: 489 FNLMTSVYQIVPDSDHYTCLVDLLGR--------YGLID-EAFELLRSMPVEVESDT--- 536
+++++Y + +D + + D + R Y +I+ E + SM E +T
Sbjct: 420 --MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEI 477
Query: 537 ---LGAFIGSCKLHANIGLAEWAAEKLFIIEPEK 567
L I CK IG A + E + +E E+
Sbjct: 478 YRYLETLISRCK---EIGYAPVSEEVMHQVEEEE 508
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 6/214 (2%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
+ +K A + L GK +H H + GF +Q +++ Y KC ++E A ++FD +P +
Sbjct: 112 SVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK 171
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
++V+WN ++ G E + A + F +M PD TF L+ +C Q + +
Sbjct: 172 SIVAWNSLVSGF-----EQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSL 226
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G +H Y + G DL+ +G AL++LY++CG V AR F + ++ MIS Y
Sbjct: 227 GSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGT 286
Query: 242 NCLPEEAFSMFNLLRMD-GANGDEFTFSSLLSVC 274
+ ++A +FN + D G + TF ++LS C
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 251/472 (53%), Gaps = 19/472 (4%)
Query: 184 QLHCYTVKVGFDLD---CFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI-SCY 239
QLH +T++ + + F+ ++ L + V A R F ++ M N +I +C
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 240 ALNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
EEAF ++ +L ++ D+ TF +L C + + GK H I++ F D
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD 185
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
V V + LI++Y + AR VFDEM R++V+WN++I +G+ L+L R+M R
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR 245
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVK---LSFQEFLSVANSLISAYSKCGN 415
F PD T+ S +S C +++ HA ++ + + V NSLI Y KCG+
Sbjct: 246 -SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC--GVVPDRVSFLGVL 473
+ A + F+ ++ DL +W ++I +A HG+AE+A F++M+ V P+ V+F+G+L
Sbjct: 305 LRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Query: 474 SACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVE 533
AC H G V KG YF++M Y I P +HY C+VDL+ R G I EA +++ SMP++ +
Sbjct: 365 IACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD 424
Query: 534 SDTLGAFIGS-CKLHANIGLAEWAAEKLF-IIEPEKSVN------YAAMSNIYASQRDWC 585
+ + + + CK A++ L+E A + E +S N Y +S +YAS W
Sbjct: 425 AVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWN 484
Query: 586 DVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
DV RK++ + G K PGCS IE+ H F + D +HP+ ++Y LK++
Sbjct: 485 DVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI 536
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 175/386 (45%), Gaps = 14/386 (3%)
Query: 77 KQLHAHLIKFGFCH---VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV 133
KQLHA ++ + L L +IL + ++ A ++FD + + WN +IR
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
A + + + L Y K + + PD TF ++ +C G Q+HC VK G
Sbjct: 125 AHDVSRKEEAFML---YRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG 181
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
F D +V L+ LY CG ++ AR+ F +P R LV N MI + A +F
Sbjct: 182 FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFR 241
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA---FDSDVLVASALINMYA 310
++ D +T S+LS C L +G AH+ +LR+ DVLV ++LI MY
Sbjct: 242 EMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYC 300
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML--REGFSPDELTI 368
K ++ A VF M R++ +WN +I+G +G E + M+ RE P+ +T
Sbjct: 301 KCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Query: 369 SSTISLCGYASAITETLQTHAIAVK-LSFQEFLSVANSLISAYSKCGNITSALK-CFRLT 426
+ C + + + Q + V+ + L ++ ++ G IT A+ +
Sbjct: 361 VGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMP 420
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATE 452
+PD V W SL+ A G + + +E
Sbjct: 421 MKPDAVIWRSLLDACCKKGASVELSE 446
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
EGKQ+H ++K GF + + N ++ +Y C ++ A K+FDE+P R++VSWN MI +
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK--- 191
R E DS+ L R + PD T ++ +C ++ +G H + ++
Sbjct: 229 -RFGEYDSALQLF-----REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
V +D V +L+++Y KCG + A + F + RDL N MI +A + EEA +
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 252 FNLL--RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL---- 305
F+ + + + + TF LL C+ + + G+ +++R D + AL
Sbjct: 343 FDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPALEHYG 397
Query: 306 --INMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEV 349
+++ A+ IT+A + M ++ + V W +++ C G E+
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 243/506 (48%), Gaps = 46/506 (9%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
KQLH K G +S+ N ++S Y KC A+++F + ++VSWN +I A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 137 DNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+N PL + F M P+ T+ ++G + G Q+H +K G +
Sbjct: 295 EN------PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+G AL+D YAKCG +E++R F + +++V N ++S YA P S+F +
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQM 407
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
G E+TFS+ L C E + HS+I+R ++ + V S+L+ YAKN+ +
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 316 TDA-------------------------RGVFDE--MLIR-----NVVAWNTIIVGCGNY 343
DA RG + E LI + V+WN I C
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRS 523
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ-EFLSV 402
EV++L + ML+ PD+ T S +SLC +T H + K F V
Sbjct: 524 DYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV 583
Query: 403 ANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGV 462
N LI Y KCG+I S +K F T E +L+TWT+LI HG ++A E F++ LS G
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGF 643
Query: 463 VPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
PDRVSF+ +L+AC H G+V +G+ F M Y + P+ DHY C VDLL R G + EA
Sbjct: 644 KPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAE 702
Query: 523 ELLRSMPVEVESDTLGAFIGSCKLHA 548
L+R MP ++ F+ C A
Sbjct: 703 HLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 197/419 (47%), Gaps = 17/419 (4%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQ-----NQILSVYLKCKEIEDADKLFDEL 118
L V K K LHA + C VL LQ N I+S+Y K E+ A K+FD++
Sbjct: 19 LNVCRKAPSFARTKALHA--LSITLCSVL-LQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 119 PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN 178
P RN VS+N +I+G + + + + F M +P+ T +GL+ SC +
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWG-----VFSEMRYFGYLPNQSTVSGLL-SCASL-D 128
Query: 179 IGVGIQLHCYTVKVG-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
+ G QLH ++K G F D FVG L+ LY + L+E A + F +P + L N M+S
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+E F L GA+ E +F +L ++ DI K H ++ D
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML 357
++ V ++LI+ Y K N A +F + ++V+WN II + + LKL M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
GFSP++ T S + + ++ Q H + +K + + + N+LI Y+KCGN+
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 418 SALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
+ CF + ++V W +L+ YA + +F +ML G P +F L +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 176/391 (45%), Gaps = 47/391 (12%)
Query: 28 SSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFG 87
++ +P L+ VS+P+ + T + L VS+ L G+Q+H LIK G
Sbjct: 291 TAKSENPLKALKLFVSMPEHGFSPNQGTY----VSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 88 FCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLC 147
+ L N ++ Y KC +ED+ FD + +N+V WN ++ G A +D P+C
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD------GPIC 400
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
+S F +ML P TF+ + SC + QLH V++G++ + +V +L+
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRS 456
Query: 208 YAKCGLVENA------------------------RRA--------FCAVPCRDLVMCNVM 235
YAK L+ +A RR + D V N+
Sbjct: 457 YAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIA 516
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF 295
I+ + + EE +F + D++TF S+LS+C L +G H LI + F
Sbjct: 517 IAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDF 576
Query: 296 D-SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLR 354
+D V + LI+MY K +I VF+E +N++ W +I G +G G E L+ +
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFK 636
Query: 355 DMLREGFSPDELTISSTISLCGYASAITETL 385
+ L GF PD ++ S ++ C + + E +
Sbjct: 637 ETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 145/286 (50%), Gaps = 9/286 (3%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
++ LY K G V A + F +P R+ V N +I Y+ ++A+ +F+ +R G +
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVASALINMYAKNENITDARGVF 322
+ T S LLS C +L+ G H L L+ F +D V + L+ +Y + + + A VF
Sbjct: 115 QSTVSGLLS-CASLDV-RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
++M +++ WN ++ G+ G E + R+++R G S LT SS + + S +
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS---LTESSFLGVLKGVSCVK 229
Query: 383 E---TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIH 439
+ + Q H A K +SV NSLISAY KCGN A + F+ D+V+W ++I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 440 AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
A A KA ++F M G P++ +++ VL + L++ G
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLS--FQEFLSVANSLISAYSKCGNITSALKCFRL 425
+ S +++C A + T HA+++ L + + V N++IS Y K G ++ A K F
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
E + V++ ++I Y+ +G +KA +F +M G +P++ + G+LS +
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 486 LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
LH +L ++ + D+ TCL+ L GR L++ A ++ MP +
Sbjct: 135 LHGLSLKYGLF--MADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 257/552 (46%), Gaps = 49/552 (8%)
Query: 81 AHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNEN 140
A +IK L NQ ++ K ++ A ++ NV +N + +G
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFV------ 847
Query: 141 DSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCF 199
S P+ + + RML + V P T++ L+ + G +Q H + K GF
Sbjct: 848 TCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW--KFGFGFHVK 905
Query: 200 VGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG 259
+ L+D Y+ G + AR+ F +P RD + M+S Y +L MD
Sbjct: 906 IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR------------RVLDMDS 953
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDAR 319
AN + Q + + ++ LIN Y N+ A
Sbjct: 954 ANS---------------------------LANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
+F++M ++++++W T+I G E + + M+ EG PDE+T+S+ IS C +
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 380 AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIH 439
+ + H ++ F + + ++L+ YSKCG++ AL F + +L W S+I
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 440 AYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIV 499
A HG A++A +MF KM V P+ V+F+ V +AC H GLV +G + M Y IV
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Query: 500 PDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEK 559
+ +HY +V L + GLI EA EL+ +M E + GA + C++H N+ +AE A K
Sbjct: 1167 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 1226
Query: 560 LFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKV-PGCSWIEVANQVHSFV 618
L ++EP S Y + ++YA Q W DV R + + G K+ PG S I + + H F
Sbjct: 1227 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFA 1286
Query: 619 SRDKTHPKALEM 630
+ DK+H + E+
Sbjct: 1287 AADKSHSASDEV 1298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD V + + + A L GK++H + ++ GF + + + ++ +Y KC +E A
Sbjct: 1030 PDEVTM--STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
+F LP +N+ WN +I G+A A + F +M +E V P+ VTF + +
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAH-----GFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 173 CVQFHNIGVGIQLHCYTV---KVGFDLDCFVGCALVDLYAKCGLVENA 217
C + G +++ + + +++ + G +V L++K GL+ A
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG--MVHLFSKAGLIYEA 1188
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 241/495 (48%), Gaps = 35/495 (7%)
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
NI +H ++ D D FV L+ + + V+ A F V ++ + MI
Sbjct: 41 NIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMID 100
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+ + + S+++ + + D + +S+L CD + + H+ +L+ F S
Sbjct: 101 GFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGS 156
Query: 298 DVLVASALINMYAKNENITDARGVFDEM-------------------------------L 326
V ++ +Y K+ + +A+ +FDEM
Sbjct: 157 SRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVK 216
Query: 327 IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
I++ V W +I G + ++ L+L R+M E S +E T +S C A+
Sbjct: 217 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRW 276
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
H+ + V N+LI+ YS+CG+I A + FR+ + D++++ ++I A HG
Sbjct: 277 VHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA 336
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYT 506
+ +A F M++ G P++V+ + +L+AC+H GL+ GL FN M V+ + P +HY
Sbjct: 337 SVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYG 396
Query: 507 CLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPE 566
C+VDLLGR G ++EA+ + ++P+E + LG + +CK+H N+ L E A++LF E
Sbjct: 397 CIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENP 456
Query: 567 KSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
S Y +SN+YAS W + R+ + D G K PGCS IEV NQ+H F+ D HP
Sbjct: 457 DSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPH 516
Query: 627 ALEMYATLKMLHVCL 641
+Y L+ L+ L
Sbjct: 517 KEAIYQRLQELNRIL 531
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 207/464 (44%), Gaps = 63/464 (13%)
Query: 40 ASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQ---------LHAHLIKFGFCH 90
A+++ T RDPD+ N L++S ++ + + +HA +I+
Sbjct: 6 AAITGGPSTFRRDPDS------NTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQ 59
Query: 91 VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSY 150
+ +++ V ++ A +F + NV + MI G D VS
Sbjct: 60 DAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADG-----VSL 114
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
+ RM+ V+PD ++ +C ++ V ++H +K+GF VG ++++Y K
Sbjct: 115 YHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK 170
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYA------------------------------ 240
G + NA++ F +P RD V VMI+CY+
Sbjct: 171 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 230
Query: 241 -LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
N +A +F ++M+ + +EFT +LS C L ++G+ HS + Q +
Sbjct: 231 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN 290
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
V +ALINMY++ +I +AR VF M ++V+++NT+I G +G E + RDM+
Sbjct: 291 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 350
Query: 360 GFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
GF P+++T+ + ++ C + + L+ +++ + + + ++ + G +
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 419 ALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
A +R E EPD + +L+ A HG E ++ +++
Sbjct: 411 A---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF 451
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 240/497 (48%), Gaps = 42/497 (8%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL-------YAKCGLVENARRAF 221
L+ SC F ++ + +H + ++ D FV L+ L L+ A F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 222 CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
+ +L + N++I C++ P +AF + + D TF L+ +E
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG-- 339
+G+ HS I+R F +DV V ++L++MYA I A +F +M R+VV+W +++ G
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 340 -CGNYGDGSEV----------------------------LKLLRDMLREGFSPDELTISS 370
CG + E+ + L M REG +E + S
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
IS C + A+ + + VK L + +L+ + +CG+I A+ F E D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
++W+S+I A HG A KA F +M+S G +P V+F VLSAC+H GLV KGL +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
M + I P +HY C+VD+LGR G + EA + M V+ + LGA +G+CK++ N
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 551 GLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEV 610
+AE L ++PE S Y +SNIYA W +ES R M+ +K K PG S IE+
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 611 ANQVHSF-VSRDKTHPK 626
+++ F + D+ HP+
Sbjct: 495 DGKINKFTMGDDQKHPE 511
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 188/432 (43%), Gaps = 59/432 (13%)
Query: 114 LFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSC 173
+F ++ N+ +N++IR + + ++ +ML ++ PD +TF LI +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFS-----TGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 174 VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA------------------------ 209
+ + VG Q H V+ GF D +V +LV +YA
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 210 -------KCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
KCG+VENAR F +P R+L ++MI+ YA N E+A +F ++ +G
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 263 DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVF 322
+E S++S C L + G+ A+ +++ ++++ +AL++M+ + +I A VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
+ + + ++W++II G +G + + M+ GF P ++T ++ +S C + +
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 383 ETLQTHAIAVK-LSFQEFLSVANSLISAYSKCGNITSALK-CFRLTEEPDLVTWTSLIHA 440
+ L+ + K + L ++ + G + A ++ +P+ +L+ A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
+ E V +RV + + H G Y+ L++++Y
Sbjct: 428 CKIYKNTE--------------VAERVGNMLIKVKPEHSG-------YYVLLSNIYACAG 466
Query: 501 DSDHYTCLVDLL 512
D L D++
Sbjct: 467 QWDKIESLRDMM 478
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 138/319 (43%), Gaps = 43/319 (13%)
Query: 269 SLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINM------YAKNENITD-ARGV 321
+LL C + + D+ K+ H +LR SDV VAS L+ + + K N+ A G+
Sbjct: 17 ALLQSCSS--FSDL-KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 322 FDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI 381
F ++ N+ +N +I + S+ ML+ PD +T I +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAY 441
QTH+ V+ FQ + V NSL+ Y+ CG I +A + F D+V+WTS++ Y
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 442 AFHGQAEKATEMFEKML-----------------SC--------------GVVPDRVSFL 470
G E A EMF++M +C GVV + +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
V+S+CAH G + G + + + V + T LVD+ R G I++A + +P
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRCGDIEKAIHVFEGLP- 311
Query: 531 EVESDTLGAFIGSCKLHAN 549
E +S + + I +H +
Sbjct: 312 ETDSLSWSSIIKGLAVHGH 330
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 164/383 (42%), Gaps = 64/383 (16%)
Query: 17 LYSFVAQCFSNSSHQPHP---WSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFL 73
+++ + +CFS + ++++ S PD F +K S++ +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF----------PFLIKASSEMECV 133
Query: 74 PEGKQLHAHLIKFGFCHVLSLQNQILSVYL------------------------------ 103
G+Q H+ +++FGF + + ++N ++ +Y
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 104 -KCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPD 162
KC +E+A ++FDE+P RN+ +W+IMI G A ++ + F+ M E VV +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYA-----KNNCFEKAIDLFEFMKREGVVAN 248
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
+I SC + G + + Y VK ++ +G ALVD++ +CG +E A F
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD------- 275
+P D + + +I A++ +A F+ + G + TF+++LS C
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWN 334
LE Y+ K H + R +++M + + +A +M ++ N
Sbjct: 369 GLEIYENMKKDHGIEPRLEH------YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 335 TIIVGCGNYGDGSEVLKLLRDML 357
++ C Y + +EV + + +ML
Sbjct: 423 ALLGACKIYKN-TEVAERVGNML 444
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 238/453 (52%), Gaps = 2/453 (0%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
++H ++ GF + L++ G + AR+ F + + + N + Y N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
LP E+ ++ +R G DEFT+ ++ L + G H+ +++ F +VA+
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
L+ MY K ++ A +F+ M ++++VAWN + C G+ + L+ M +
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D T+ S +S CG ++ + + A K + V N+ + + KCGN +A F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT 483
++ ++V+W+++I YA +G + +A +F M + G+ P+ V+FLGVLSAC+H GLV
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 484 KGLHYFNLM--TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI 541
+G YF+LM ++ + P +HY C+VDLLGR GL++EA+E ++ MPVE ++ GA +
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 542 GSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAK 601
G+C +H ++ L + A+ L P+ + +SNIYA+ W V+ R + G K
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448
Query: 602 VPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
V S +E ++H F DK+HP++ +Y L
Sbjct: 449 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKL 481
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 174/372 (46%), Gaps = 9/372 (2%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
K++HA +++ GF SL Q+L + ++ A ++FDE+ + WN + +G
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
+S + +K+M V PD T+ ++ + Q + G LH + VK GF
Sbjct: 88 QLPFES-----LLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
V LV +Y K G + +A F ++ +DLV N ++ A FN +
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
D D FT S+LS C L +IG+ + ++ D +++V +A ++M+ K N
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
AR +F+EM RNVV+W+T+IVG GD E L L M EG P+ +T +S C
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANS---LISAYSKCGNITSALKCF-RLTEEPDLV 432
+A + E + ++ V+ + + ++ + G + A + ++ EPD
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 433 TWTSLIHAYAFH 444
W +L+ A A H
Sbjct: 383 IWGALLGACAVH 394
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 5/217 (2%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G LHAH++K+GF + + +++ +Y+K E+ A+ LF+ + +++V+WN +
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
N + + + YF +M + V D T ++ +C Q ++ +G +++ K D
Sbjct: 188 TGN-----SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ V A +D++ KCG E AR F + R++V + MI YA+N EA ++F +
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
+ +G + TF +LS C + GK SL+++
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 221/434 (50%), Gaps = 36/434 (8%)
Query: 211 CGLVEN---ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
CG + N A R F + ++++ N MI CY+L P E+ S F+ ++ G DE+T+
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
+ LL C +L GK H ++R F + ++ +Y + DA+ VFDEM
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 328 RNVVAWNTIIVGCGNYGD-------------------------------GSEVLKLLRDM 356
RNVV WN +I G + GD E L+L +M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLS-FQEFLSVANSLISAYSKCGN 415
+ +GF PDE T+ + + + + H+ A F++F++V N+L+ Y K G+
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG-VVPDRVSFLGVLS 474
+ +A FR + ++V+W +LI A +G+ E ++F+ M+ G V P+ +FLGVL+
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 475 ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVES 534
C++ G V +G F LM +++ ++HY +VDL+ R G I EAF+ L++MPV +
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 535 DTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMI 594
G+ + +C+ H ++ LAE AA +L IEP S NY +SN+YA + W DVE R ++
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 595 GDKGDAKVPGCSWI 608
K G S I
Sbjct: 466 KKNRLRKSTGQSTI 479
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 184/423 (43%), Gaps = 57/423 (13%)
Query: 70 RAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLK-CKEIEDAD---KLFDELPGRNVVS 125
R LPE +HAHL++ H L N +L+ ++ C + ++D ++F + NV+
Sbjct: 17 RTRLPE---IHAHLLR----HFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV 69
Query: 126 WNIMIR--GVAGRDNENDSSAPL-CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
+N MI+ + G PL +S+F M + D T+ L+ SC ++ G
Sbjct: 70 FNAMIKCYSLVG--------PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG 121
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMI------ 236
+H ++ GF + +V+LY G + +A++ F + R++V+ N+MI
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 237 ----------------SCYALNCL---------PEEAFSMFNLLRMDGANGDEFTFSSLL 271
S + N + EA +F + G + DE T ++L
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSD-VLVASALINMYAKNENITDARGVFDEMLIRNV 330
+ +L D GK HS D + V +AL++ Y K+ ++ A +F +M RNV
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHA 389
V+WNT+I G G G + L M+ EG +P+E T ++ C Y + +
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 390 IAV-KLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQA 447
+ + + + +++ S+ G IT A K + + + W SL+ A HG
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 448 EKA 450
+ A
Sbjct: 422 KLA 424
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 51 RDPDTVHLFC--------------ANALKVSAKRAFLPEGKQLHAHLIKFG-FCHVLSLQ 95
RD + + LFC L +SA L GK +H+ G F +++
Sbjct: 214 RDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVG 273
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++ Y K ++E A +F ++ RNVVSWN +I G A + + F M+
Sbjct: 274 NALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSA-----VNGKGEFGIDLFDAMI 328
Query: 156 LE-KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG--CALVDLYAKCG 212
E KV P+ TF G++ C + G +L ++ F L+ A+VDL ++ G
Sbjct: 329 EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER-FKLEARTEHYGAMVDLMSRSG 387
Query: 213 LVENARRAFCAVP 225
+ A + +P
Sbjct: 388 RITEAFKFLKNMP 400
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 5/233 (2%)
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDG 346
H+ +LR L+ + I++ N A VF + NV+ +N +I G
Sbjct: 24 HAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPP 83
Query: 347 SEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSL 406
E L M G DE T + + C S + H ++ F + +
Sbjct: 84 LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV 143
Query: 407 ISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
+ Y+ G + A K F E ++V W +I + G E+ +F++M +
Sbjct: 144 VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI---- 199
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
VS+ ++S+ + CG + L F M PD ++ + G++D
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMID-QGFDPDEATVVTVLPISASLGVLD 251
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 178/651 (27%), Positives = 280/651 (43%), Gaps = 117/651 (17%)
Query: 44 VPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYL 103
+PD LF P + CAN V A GK +H+ +IK G L + N IL+VY
Sbjct: 178 LPDDFLF--PKILQ-GCANCGDVEA-------GKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 104 KCKEIEDADKLFDELPGRNV-----------------------------------VSWNI 128
KC E++ A K F + R+V V+WNI
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 129 MIRGVAGRDNENDSSAPL-------------------------------CVSYFKRMLLE 157
+I G + + D++ L + F++M L
Sbjct: 288 LIGGY-NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
VVP+ VT + +C I G ++H VK+GF D VG +LVD+Y+KCG +E+A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
R+ F +V +D+ N MI+ Y +A+ +F RM AN
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT--RMQDAN---------------- 448
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM-----LIRNVVA 332
+++ + +I+ Y KN + +A +F M + RN
Sbjct: 449 -----------------LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV 392
WN II G G E L+L R M F P+ +TI S + C + H +
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 393 KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATE 452
+ + +V N+L Y+K G+I + F E D++TW SLI Y HG A
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
+F +M + G+ P+R + ++ A G V +G F + + Y I+P +H + +V L
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 513 GRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYA 572
GR ++EA + ++ M ++ E+ +F+ C++H +I +A AAE LF +EPE + +
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES 731
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKT 623
+S IYA K D K G SWIEV N +H+F + D++
Sbjct: 732 IVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS 782
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 208/453 (45%), Gaps = 37/453 (8%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G+ LHA F V ++ ++LS+Y KC I DA K+FD + RN+ +W+ MI G
Sbjct: 100 GRILHARFGLFTEPDVF-VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMI-GAYS 157
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
R+N A L F+ M+ + V+PD F ++ C ++ G +H +K+G
Sbjct: 158 RENRWREVAKL----FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
V +++ +YAKCG ++ A + F + RD++ N ++ Y N EEA + +
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+G + T++ L+ Y +GK ++ L Q ++ + A
Sbjct: 274 EKEGISPGLVTWNILIG-----GYNQLGKCDAAMDLMQKMETFGITA------------- 315
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
+V W +I G + G + L + R M G P+ +TI S +S C
Sbjct: 316 -------------DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
I + + H+IAVK+ F + + V NSL+ YSKCG + A K F + D+ TW
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWN 422
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
S+I Y G KA E+F +M + P+ +++ ++S G + + F M
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
++ ++ + ++ + G DEA EL R M
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 175/370 (47%), Gaps = 45/370 (12%)
Query: 165 TFNGLIGSCVQFHNIGVGIQLHCYTVKVGF--DLDCFVGCALVDLYAKCGLVENARRAFC 222
T+ L+ SC+ +I +G LH + G + D FV L+ +YAKCG + +AR+ F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILH---ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
++ R+L + MI Y+ E +F L+ DG D+F F +L C +
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
GK+ HS++++ S + V+++++ +YAK + A F M R+V+AWN++++
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSV 402
G E ++L+++M +EG SP +T
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTW---------------------------------- 285
Query: 403 ANSLISAYSKCGNITSALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
N LI Y++ G +A+ + E D+ TWT++I +G +A +MF KM
Sbjct: 286 -NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLI 518
GVVP+ V+ + +SAC+ ++ +G ++ + + D LVD+ + G +
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM-GFIDDVLVGNSLVDMYSKCGKL 403
Query: 519 DEAFELLRSM 528
++A ++ S+
Sbjct: 404 EDARKVFDSV 413
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF----DSDVLVA 302
EA + L G+ T+ LL C D G + IL F + DV V
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESC-----IDSGSIHLGRILHARFGLFTEPDVFVE 118
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
+ L++MYAK I DAR VFD M RN+ W+ +I EV KL R M+++G
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
PD+ + C + H++ +KL L V+NS+++ Y+KCG + A K
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
FR E D++ W S++ AY +G+ E+A E+ ++M G+ P V++ ++ G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 483 TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ M + + I D +T ++ L G+ +A ++ R M
Sbjct: 299 DAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 254/517 (49%), Gaps = 38/517 (7%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+QLH ++K+G+ + L+ I+ VY KC+ + DA ++FDE+ + VSWN+++R R
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR----R 237
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
E + V +FK ML V P T + ++ +C + + VG +H VK+
Sbjct: 238 YLEMGFNDEAVVMFFK-MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL- 255
D V ++ D+Y KC +E+ARR F +DL +S YA++ L EA +F+L+
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 256 ------------------------------RMDGANGDEFTFSSLLSVCDTLEYYDIGKL 285
R + N D T +L+VC + +GK
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 286 AHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML-IRNVVAWNTIIVGCGNYG 344
AH I R +D++V+VA+AL++MY K + A F +M +R+ V+WN ++ G G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
+ L M E P + T+++ ++ C A+ H ++ ++ + +
Sbjct: 477 RSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
+++ YSKC A++ F+ DL+ W S+I +G++++ E+F + + GV P
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
D V+FLG+L AC G V G YF+ M++ Y I P +HY C+++L +YG + + E
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 525 LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
L MP + L +C+ + L WAA++L
Sbjct: 656 LLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 246/522 (47%), Gaps = 44/522 (8%)
Query: 40 ASVSVPDQTLFRDPDTVHLFCANAL-KVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQI 98
+VS LF P+ V + L + + +A + + +++ +HL+ F + L N+
Sbjct: 43 GNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRA 102
Query: 99 LSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEK 158
+ Y KC ++DA +LF+E+P R+ SWN +I A +N S + F+RM +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA----QNGVSDEV-FRMFRRMNRDG 157
Query: 159 VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR 218
V +F G++ SC ++ + QLHC VK G+ + + ++VD+Y KC ++ +AR
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDAR 217
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
R F + V NV++ Y +EA MF + T SS++ C
Sbjct: 218 RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSL 277
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE-------------- 324
++GK+ H++ ++ + +D +V++++ +MY K + + AR VFD+
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 325 -----------------MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
M RN+V+WN ++ G + + E L L M +E + D +T
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVT 397
Query: 368 ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LT 426
+ +++C S + Q H + + + VAN+L+ Y KCG + SA FR ++
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT--K 484
E D V+W +L+ A G++E+A FE M P + + +L+ CA+ + K
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGK 516
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLR 526
+H F L+ Y+I D +VD+ + D A E+ +
Sbjct: 517 AIHGF-LIRDGYKI--DVVIRGAMVDMYSKCRCFDYAIEVFK 555
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 22/349 (6%)
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
I Y K + DAR +F+EM R+ +WN +I C G EV ++ R M R+G E
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRL 425
+ + + CG + Q H VK + + + S++ Y KC ++ A + F
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGL--VT 483
P V+W ++ Y G ++A MF KML V P + V+ AC+ V
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 484 KGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGS 543
K +H + SV V D+ T + D+ + ++ A R + + S L ++ +
Sbjct: 283 KVIHAIAVKLSV---VADTVVSTSVFDMYVKCDRLESA----RRVFDQTRSKDLKSWTSA 335
Query: 544 CKLHANIGLAEWAAEKLFIIEPEKS-VNYAAMSNIYASQRDWCD----VESARKMIGDKG 598
+A GL A E LF + PE++ V++ AM Y +W + + R+ I +
Sbjct: 336 MSGYAMSGLTREARE-LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 599 DAKV-------PGCSWIEVANQVHSFVSRDKTHPKALEMYATLKMLHVC 640
+ + G S +++ Q H F+ R + A L M C
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKC 443
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV-- 133
GK +H LI+ G+ + ++ ++ +Y KC+ + A ++F E R+++ WN +IRG
Sbjct: 515 GKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCR 574
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
GR E F + E V PD+VTF G++ +C++ ++ +G Q
Sbjct: 575 NGRSKE-------VFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 237/498 (47%), Gaps = 34/498 (6%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDL---YAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
Q+H +K G D + + + A+ F D + N+MI ++
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
+ PE + ++ + A + +TF SLL C L ++ H+ I + +++DV
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 301 VASALINMYAKNENITDARGVFD-------------------------------EMLIRN 329
++LIN YA N A +FD +M +N
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
++W T+I G E L+L +M PD +++++ +S C A+ + H+
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
K + + LI Y+KCG + AL+ F+ ++ + WT+LI YA+HG +
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A F +M G+ P+ ++F VL+AC++ GLV +G F M Y + P +HY C+V
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
DLLGR GL+DEA ++ MP++ + GA + +C++H NI L E E L I+P
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGG 451
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
Y +NI+A + W R+++ ++G AKVPGCS I + H F++ D++HP+ +
Sbjct: 452 RYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEK 511
Query: 630 MYATLKMLHVCLDTSCWL 647
+ + +++ L+ + ++
Sbjct: 512 IQSKWRIMRRKLEENGYV 529
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 174/421 (41%), Gaps = 41/421 (9%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKE---IEDADKLFDELPGRNVVSWNIMIR 131
E KQ+HA ++K G + LS + + A +FD + WN+MIR
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
G + D S + ++RML + TF L+ +C Q+H K
Sbjct: 89 GFSCSDEPERS-----LLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN------------------ 233
+G++ D + +L++ YA G + A F +P D V N
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 234 -------------VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
MIS Y + +EA +F+ ++ D + ++ LS C L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 281 DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC 340
+ GK HS + + D ++ LI+MYAK + +A VF + ++V AW +I G
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 341 GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE-TLQTHAIAVKLSFQEF 399
+G G E + +M + G P+ +T ++ ++ C Y + E L +++ + +
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 400 LSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+ ++ + G + A + + + +P+ V W +L+ A H E E+ E ++
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 459 S 459
+
Sbjct: 444 A 444
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+PD V L ANAL A+ L +GK +H++L K L ++ +Y KC E+E+A
Sbjct: 244 EPDNVSL--ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
++F + ++V +W +I G A + ++ +S F M + P+ +TF ++
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREA-----ISKFMEMQKMGIKPNVITFTAVLT 356
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFV---GCALVDLYAKCGLVENARRAFCAVPCR 227
+C + G +L Y+++ ++L + GC +VDL + GL++ A+R +P +
Sbjct: 357 ACSYTGLVEEG-KLIFYSMERDYNLKPTIEHYGC-IVDLLGRAGLLDEAKRFIQEMPLK 413
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 292/600 (48%), Gaps = 42/600 (7%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLK--CKEIEDADKLFDELPGRNVVSWNIMIRGV 133
G Q+H ++K GF + + + N ++S+Y K +D KLFDE+P R+V SWN ++ +
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
++ ++ + L +++ +E D T + L+ SC + G +LH +++G
Sbjct: 260 V-KEGKSHKAFDL---FYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIG 315
Query: 194 FDLDCFVGCALVDLYAKC-------------------------------GLVENARRAFC 222
+ V AL+ Y+K G+V++A F
Sbjct: 316 LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFA 375
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
V ++ + N +++ + N +A +F + G +F+ +S + C + +
Sbjct: 376 NVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKV 435
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML--IRNVVAWNTIIVGC 340
+ H ++ + + +AL++M + E + DA +FD+ + + A +II G
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 341 GNYGDGSEVLKLL-RDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
G + + L R + + DE++++ +++CG Q H A+K +
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+S+ NSLIS Y+KC + A+K F E D+++W SLI Y ++A ++ +M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 460 CGVVPDRVSFLGVLSACAHC--GLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
+ PD ++ V+SA + ++ F M ++Y I P ++HYT V +LG +GL
Sbjct: 616 KEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGL 675
Query: 518 IDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNI 577
++EA + + SMPV+ E L A + SC++H+N +A+ A+ + +PE Y SNI
Sbjct: 676 LEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNI 735
Query: 578 YASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
Y++ W E R+ + ++G K P SWI N++HSF +RD +HP+ ++Y L++L
Sbjct: 736 YSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 198/462 (42%), Gaps = 48/462 (10%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L++SA+ + K +HA +K L N ++S YLK +A +F L V
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTV 145
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVG 182
VS+ +I G + + E ++ + F RM +V P+ TF ++ +CV+ +G
Sbjct: 146 VSYTALISGFSRLNLEIEA-----LKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAK--CGLVENARRAFCAVPCRDLVMCNVMISCYA 240
IQ+H VK GF FV +L+ LY K ++ + F +P RD+ N ++S
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 241 LNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDV 299
+AF +F + R++G D FT S+LLS C G+ H +R ++
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL 320
Query: 300 LVASALINMYAKNENITDARGVFDEMLI-------------------------------R 328
V +ALI Y+K ++ +++ M+ +
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK 380
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
N + +N ++ G G G + LKL DML+ G + +++S + CG S + Q H
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV----TWTSLIHAYAFH 444
+K + +L+ ++C + A + F + P + TS+I YA +
Sbjct: 441 GFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF--DQWPSNLDSSKATTSIIGGYARN 498
Query: 445 GQAEKATEMFEKML-SCGVVPDRVSFLGVLSACAHCGLVTKG 485
G +KA +F + L + D VS +L+ C G G
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 46 DQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKC 105
+Q LF D ++ L A V F G Q+H + +K G+ +SL N ++S+Y KC
Sbjct: 514 EQKLFLDEVSLTLILA----VCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKC 569
Query: 106 KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
+ +DA K+F+ + +V+SWN +I + N +++ ++ + RM +++ PD +T
Sbjct: 570 CDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEA-----LALWSRMNEKEIKPDIIT 624
Query: 166 FNGLIGS 172
+I +
Sbjct: 625 LTLVISA 631
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 267/562 (47%), Gaps = 7/562 (1%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
GK +H+++I G + L+ ++ Y + ++EDA ++ + ++V W ++ G
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV- 301
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
+ A V F M + P+ T++ ++ C ++ G Q+H T+KVGF+
Sbjct: 302 ----RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Query: 196 LDCFVGCALVDLYAKCGLVE-NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
VG ALVD+Y KC E A R F A+ ++V +I + ++ F +
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 255 LRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNEN 314
+ + T S +L C L + H+ +LR+ D +++V ++L++ YA +
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ A V M R+ + + +++ G L ++ M +G D+L++ IS
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTW 434
A+ H +VK F SV NSL+ YSKCG++ A K F PD+V+W
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSW 597
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS 494
L+ A +G A FE+M PD V+FL +LSAC++ L GL YF +M
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 495 VYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
+Y I P +HY LV +LGR G ++EA ++ +M ++ + + +C+ N+ L E
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 555 WAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
A K + P Y ++++Y + R ++ +K +K G S +EV +V
Sbjct: 718 DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKV 777
Query: 615 HSFVSRDKTH-PKALEMYATLK 635
HSFVS D T K +YA ++
Sbjct: 778 HSFVSEDVTRVDKTNGIYAEIE 799
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 224/458 (48%), Gaps = 16/458 (3%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G +H +IKFG L L N +LS+YLK I +A KLFDE+ R V +W +MI A
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS--AF 99
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
++ +SA +S F+ M+ P+ TF+ ++ SC +I G ++H +K GF+
Sbjct: 100 TKSQEFASA---LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ VG +L DLY+KCG + A F ++ D + +MIS EA ++ +
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
G +EFTF LL L + GK HS I+ + +V++ ++L++ Y++ +
Sbjct: 217 VKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
DA V + ++V W +++ G E + +M G P+ T S+ +SLC
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKC-GNITSALKCFRLTEEPDLVTW 434
++ Q H+ +K+ F++ V N+L+ Y KC + A + F P++V+W
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL--HYFNLM 492
T+LI HG + + +M+ V P+ V+ GVL AC+ V + L H + L
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 493 TSV--YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
V +V +S LVD +D A+ ++RSM
Sbjct: 456 RHVDGEMVVGNS-----LVDAYASSRKVDYAWNVIRSM 488
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/600 (24%), Positives = 267/600 (44%), Gaps = 56/600 (9%)
Query: 7 FKKQLHFTPILYSFVAQCFSNSSHQPHPWS---RLRASVSVPDQTLFRDPDTVHLFCANA 63
F + H T ++ + F+ S S + AS + P++ F +V CA
Sbjct: 81 FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF---SSVVRSCAGL 137
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
+S G ++H +IK GF + + + +Y KC + ++A +LF L +
Sbjct: 138 RDISY-------GGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
+SW +MI + G ++ + ++ M+ V P+ TF L+G+ F + G
Sbjct: 191 ISWTMMISSLVGARKWREA-----LQFYSEMVKAGVPPNEFTFVKLLGAS-SFLGLEFGK 244
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+H + G L+ + +LVD Y++ +E+A R + +D+ + ++S + N
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
+EA F +R G + FT+S++LS+C + D GK HS ++ F+ V +
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 304 ALINMYAK-NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
AL++MY K + + +A VF M+ NVV+W T+I+G ++G + LL +M++
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
P+ +T+S + C + L+ HA ++ + V NSL+ AY+ + A
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
R + D +T+TSL+ + G+ E A + M G+ D++S G +SA A+ G +
Sbjct: 485 IRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 483 TKGLHY---------------FNLMTSVYQ---------------IVPDSDHYTCLVDLL 512
G H N + +Y PD + LV L
Sbjct: 545 ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGL 604
Query: 513 GRYGLID---EAFELLRSMPVEVESDTLGAFIGSCK--LHANIGLAEWAA-EKLFIIEPE 566
G I AFE +R E +S T + +C ++GL + +K++ IEP+
Sbjct: 605 ASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQ 664
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 9/301 (2%)
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
+G+ +HC +K G + + L+ LY K + NAR+ F + R + VMIS +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
+ A S+F + G + +EFTFSS++ C L G H +++ F+ + +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
V S+L ++Y+K +A +F + + ++W +I E L+ +M++ G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 361 FSPDELTISSTISLCGYASAI----TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
P+E T + L G +S + +T+ ++ I + L SL+ YS+ +
Sbjct: 221 VPPNEFTF---VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKT--SLVDFYSQFSKM 275
Query: 417 TSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
A++ + E D+ WTS++ + + +A++A F +M S G+ P+ ++ +LS C
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 477 A 477
+
Sbjct: 336 S 336
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
+LS C++ IG H +++ ++ + + L+++Y K + I +AR +FDEM R
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
V AW +I + + L L +M+ G P+E T SS + C I+ + H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
+K F+ V +SL YSKCG A + F + D ++WT +I + + +
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A + + +M+ GV P+ +F+ +L A + GL + N++ V I + T LV
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNII--VRGIPLNVVLKTSLV 266
Query: 510 DLLGRYGLIDEAFELLRS 527
D ++ +++A +L S
Sbjct: 267 DFYSQFSKMEDAVRVLNS 284
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 223/465 (47%), Gaps = 68/465 (14%)
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G ++ A + F +P D+ +CN ++ A + PE+ S++ + G + D +TF+ +L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI------------------------- 306
C LE+ G H ++R F + V +ALI
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 307 ------NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC-------------------- 340
+ YAK I +A +FDEM ++ VAWN +I GC
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 341 -----------GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH- 388
N G E L + ++M G PD +TI S +S C + + H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 389 ----AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
+V S + N+LI Y+KCG+I A++ FR ++ DL TW +LI A H
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH 359
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
AE + EMFE+M V P+ V+F+GV+ AC+H G V +G YF+LM +Y I P+ H
Sbjct: 360 -HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 418
Query: 505 YTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIE 564
Y C+VD+LGR G ++EAF + SM +E + +G+CK++ N+ L ++A EKL +
Sbjct: 419 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 478
Query: 565 PEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
++S +Y +SNIYAS W V+ RKM D K G S IE
Sbjct: 479 KDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 194/457 (42%), Gaps = 83/457 (18%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQIL-SVYLKCK-EIEDADKLFDELPGRNVVSWNIMIRGVA 134
KQ+HA ++ G LS+ +++ S L ++ A KLFDE+P +V N ++RG A
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 135 GRDNENDSSAP-LCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
S P VS + M V PD TF ++ +C + G H V+ G
Sbjct: 89 ------QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 194 FDLDCFVGCALV-------DL------------------------YAKCGLVENARRAFC 222
F L+ +V AL+ DL YAK G ++ A R F
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 223 AVPCRD-------------------------------LVMCNVMISCYALNC-LPEEAFS 250
+P +D +V N MIS Y +NC P+EA
Sbjct: 203 EMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGY-VNCGYPKEALG 261
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVAS----AL 305
+F +R G + D T SLLS C L + GK H IL A S + V + AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCG-NYGDGSEVLKLLRDMLREGFSPD 364
I+MYAK +I A VF + R++ WNT+IVG ++ +GS +++ +M R P+
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS--IEMFEEMQRLKVWPN 379
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKL-SFQEFLSVANSLISAYSKCGNITSALKCF 423
E+T I C ++ + E + ++ + + + + ++ + G + A
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 424 R-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ EP+ + W +L+ A +G E EK+LS
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 245/507 (48%), Gaps = 60/507 (11%)
Query: 184 QLHCYTVKVGFDLDCFVG------CALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS 237
Q+H +K G D CA DL+ + ++ A + F +P R+ N +I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 238 CYALNCLPEEAFSM---FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA 294
++ + + ++ + ++ + + FTF S+L C GK H L L+
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 295 FDSDVLVASALINMYAK-----------NENITD-------------------------- 317
F D V S L+ MY +NI +
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 318 --------ARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
AR +FD+M R+VV+WNT+I G G + +++ R+M + P+ +T+
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 370 STISLCGYASAIT--ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE 427
S + ++ E L +A + + L A LI YSKCG I A+ F
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA--LIDMYSKCGIIEKAIHVFERLP 336
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+++TW+++I+ +A HGQA A + F KM GV P V+++ +L+AC+H GLV +G
Sbjct: 337 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRR 396
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLH 547
YF+ M SV + P +HY C+VDLLGR GL+DEA E + +MP++ + A +G+C++
Sbjct: 397 YFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 548 ANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
N+ + + A L + P S Y A+SN+YASQ +W +V R + +K K PGCS
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSL 516
Query: 608 IEVANQVHSFVSRDKTHPKALEMYATL 634
I++ +H FV D +HPKA E+ + L
Sbjct: 517 IDIDGVLHEFVVEDDSHPKAKEINSML 543
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 205/510 (40%), Gaps = 91/510 (17%)
Query: 78 QLHAHLIKFGFCHVLSLQNQIL----SVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV 133
Q+HA IK G +IL + L ++++ A K+F+++P RN SWN +IRG
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+ D + A + ++ F M+ ++ V P+ TF ++ +C + I G Q+H +K
Sbjct: 101 SESDED---KALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 193 GFDLDCFVGCALVDLYAKCGLVEN------------------------------------ 216
GF D FV LV +Y CG +++
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 217 ---------ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
AR F + R +V N MIS Y+LN ++A +F ++ + T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI 327
S+L L ++G+ H D ++ SALI+MY+K I A VF+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT 387
NV+ W+ +I G +G + + M + G P ++ + ++ C + + E
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG--- 394
Query: 388 HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQA 447
+ F + +SV EP + + ++ G
Sbjct: 395 -----RRYFSQMVSVDGL----------------------EPRIEHYGCMVDLLGRSGLL 427
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP-DSDHYT 506
++A E +L+ + PD V + +L AC G V G N++ +VP DS Y
Sbjct: 428 DEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD---MVPHDSGAYV 481
Query: 507 CLVDLLGRYGLIDEAFEL-LRSMPVEVESD 535
L ++ G E E+ LR ++ D
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 151/346 (43%), Gaps = 55/346 (15%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA---------- 111
+ LK AK + EGKQ+H +K+GF + + ++ +Y+ C ++DA
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 112 -------DK----------------------------LFDELPGRNVVSWNIMIRGVAGR 136
D+ LFD++ R+VVSWN MI G +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
D+ V F+ M + P+YVT ++ + + ++ +G LH Y G +
Sbjct: 253 GFFKDA-----VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 307
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
D +G AL+D+Y+KCG++E A F +P +++ + MI+ +A++ +A F +R
Sbjct: 308 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 367
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS-LILRQAFDSDVLVASALINMYAKNENI 315
G + + +LL+ C + G+ S ++ + + ++++ ++ +
Sbjct: 368 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 427
Query: 316 TDARGVFDEMLIR-NVVAWNTIIVGC---GNYGDGSEVLKLLRDML 357
+A M I+ + V W ++ C GN G V +L DM+
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 160/627 (25%), Positives = 295/627 (47%), Gaps = 61/627 (9%)
Query: 61 ANALKVSA---KRAFLPEGKQLHAHLIKFGF--CHVLSLQNQILSVYLKCKEIEDADKLF 115
AN L V A K G+Q+H+++++ + HV + N ++S YL+ IE+A LF
Sbjct: 228 ANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF-VCNSLVSFYLRVGRIEEAASLF 286
Query: 116 DELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL-------EKVVPDYVTFNG 168
+ +++VSWN++I G A +FK L V PD VT
Sbjct: 287 TRMGSKDLVSWNVVIAGYASN-----------CEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDL-DCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
++ C Q ++ G ++H Y ++ + L D VG AL+ YA+ G A AF + +
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK 395
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
D++ N ++ +A + + ++ + L + D T SLL C ++ K H
Sbjct: 396 DIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVH 455
Query: 288 SLILRQAF---DSDVLVASALINMYAKNENITDARGVFDEML-IRNVVAWNTIIVGCGNY 343
++ + + + +AL++ YAK N+ A +F + R +V++N+++ G N
Sbjct: 456 GYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNS 515
Query: 344 GD-------------------------------GSEVLKLLRDMLREGFSPDELTISSTI 372
G +E + + R++ G P+ +TI + +
Sbjct: 516 GSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLL 575
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
+C +++ Q H ++ + + + +L+ Y+KCG++ A F+ DLV
Sbjct: 576 PVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
+T+++ YA HG+ ++A ++ M + PD V +L+AC H GL+ GL ++ +
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
+V+ + P + Y C VDL+ R G +D+A+ + MPVE ++ G + +C + + L
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDL 754
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
A L E + + N+ +SN+YA+ W V R ++ K K GCSW+EV
Sbjct: 755 GHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDG 814
Query: 613 QVHSFVSRDKTHPKALEMYATLKMLHV 639
Q + FVS D +HP+ ++ + L++
Sbjct: 815 QRNVFVSGDCSHPRRDSIFDLVNALYL 841
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/538 (23%), Positives = 263/538 (48%), Gaps = 25/538 (4%)
Query: 55 TVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKL 114
T H + +K A + L G+ LH + K G + +L++Y KC+ ++D K+
Sbjct: 19 TDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKM 78
Query: 115 FDELPGRNVVSWNIMIRGVA---GRDNENDSSAPLCVSYFKRM-LLEKVVPDYVTFNGLI 170
F ++ + V WNI++ G++ GR+ + +FK M ++ P VTF ++
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVSCGRET---------MRFFKAMHFADEPKPSSVTFAIVL 129
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV-ENARRAFCAVPCRDL 229
CV+ + G +H Y +K G + D VG ALV +YAK G + +A AF + +D+
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY---DIGKLA 286
V N +I+ ++ N + +AF F L+ + + T +++L VC +++ G+
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQI 249
Query: 287 HSLILRQAF-DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD 345
HS ++++++ + V V ++L++ Y + I +A +F M +++V+WN +I G + +
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE 309
Query: 346 GSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHAIAVKLSF-QEFLSVA 403
+ +L +++ +G SPD +TI S + +C + + + H+ ++ S+ E SV
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG 369
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
N+LIS Y++ G+ ++A F L D+++W +++ A+A + + + +L+ +
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 464 PDRVSFLGVLSACAHCGLV--TKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
D V+ L +L C + + K +H +++ + + L+D + G ++ A
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 522 FELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYA 579
++ + E TL ++ + N G + A + ++ M IYA
Sbjct: 490 HKIFLGLS---ERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 186/401 (46%), Gaps = 11/401 (2%)
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
LL D+ F ++ +C ++ G LH K+G V +++++YAKC +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRM-DGANGDEFTFSSLLSV 273
++ ++ F + D V+ N++++ +++C E F + D TF+ +L +
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI-TDARGVFDEMLIRNVVA 332
C L GK HS I++ + D LV +AL++MYAK I DA FD + ++VV+
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS---AITETLQTHA 389
WN II G ++ + ML+E P+ TI++ + +C A Q H+
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 390 IAVKLSF-QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAE 448
V+ S+ Q + V NSL+S Y + G I A F DLV+W +I YA + +
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 449 KATEMFEKMLSCG-VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
KA ++F ++ G V PD V+ + +L CA + G + + ++ D+
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNA 371
Query: 508 LVDLLGRYGLIDE---AFELLRSMPVEVESDTLGAFIGSCK 545
L+ R+G AF L+ + + + L AF S K
Sbjct: 372 LISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPK 412
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 14/285 (4%)
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
N + G D F ++ C ++ G+ H + + + V+ +++NMYAK
Sbjct: 10 NFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKC 69
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGFSPDELTISST 371
+ D + +F +M + V WN ++ G + G E ++ + M + P +T +
Sbjct: 70 RRMDDCQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI-TSALKCFRLTEEPD 430
+ LC H+ +K ++ V N+L+S Y+K G I A F + D
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG-----LVTKG 485
+V+W ++I ++ + A F ML P+ + VL CA +
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 486 LHYFNLMTSVYQIVPDSDHYTC--LVDLLGRYGLIDEAFELLRSM 528
+H + + S Q + + C LV R G I+EA L M
Sbjct: 249 IHSYVVQRSWLQ----THVFVCNSLVSFYLRVGRIEEAASLFTRM 289
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 278/582 (47%), Gaps = 45/582 (7%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
F+P G+QLHAH I G L ++++ Y +++A + + + + WN++I
Sbjct: 99 FVP-GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLI- 156
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
G R+ S VS +KRM+ + + D T+ +I +C + G +H
Sbjct: 157 GSYIRNKRFQES----VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
+ +V AL+ +Y + G V+ ARR F + RD V N +I+CY EAF +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 252 FNLLRMDGANGDEFTFSSL-----------------------------------LSVCDT 276
+ + + G T++++ L C
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 277 LEYYDIGKLAHSLILRQ-AFDSDV-LVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+ GK+ H L++R +F D+ V ++LI MY++ ++ A VF ++ ++ WN
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA-IAVK 393
+II G E LL++ML GF P+ +T++S + L + + H I +
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
S+++ L + NSL+ Y+K G I +A + F + D VT+TSLI Y G+ E A
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
F+ M G+ PD V+ + VLSAC+H LV +G F M V+ I +HY+C+VDL
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYC 572
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFI-IEPEKSVNYA 572
R G +D+A ++ ++P E S + +C +H N + EWAA+KL + +PE +Y
Sbjct: 573 RAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYM 632
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
++++YA W + + + ++ D G K + +E +++
Sbjct: 633 LLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 210/494 (42%), Gaps = 67/494 (13%)
Query: 22 AQCFSNSSH--QPHPWS----------RLRASVSVPDQTLFRDPDTVHLFCANALKVSAK 69
AQ + +S P PW+ R + SVSV + + + + +K A
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 70 RAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
G+ +H + L + N ++S+Y + +++ A +LFD + R+ VSWN +
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IG-----VGI 183
I + ++ L RM L V VT+N + G C++ N IG VG+
Sbjct: 257 INCYTSEEKLGEAFKLL-----DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM 311
Query: 184 Q-----------------------------LHCYTVK---VGFDLDCFVGCALVDLYAKC 211
+ HC ++ D+D V +L+ +Y++C
Sbjct: 312 RNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRC 370
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
+ +A F V L N +IS +A N EE + + + G + + T +S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 272 SVCDTLEYYDIGKLAHSLIL-RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
+ + GK H IL RQ++ +++ ++L++MYAK+ I A+ VFD M R+
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE-----TL 385
V + ++I G G G G L +DM R G PD +T+ + +S C +++ + E T
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFH 444
H ++L + + + ++ Y + G + A F + EP +L+ A H
Sbjct: 551 MEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 445 GQAEKATEMFEKML 458
G +K+L
Sbjct: 607 GNTNIGEWAADKLL 620
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 175/402 (43%), Gaps = 47/402 (11%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
L+ +CV F+ G QLH + + G + D + LV Y+ L++ A+
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+ NV+I Y N +E+ S++ + G DEFT+ S++ C L + G++ H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
I + ++ V +ALI+MY + + AR +FD M R+ V+WN II + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 349 VLKLLRDMLREGFSPDELTISST-----------------------------------IS 373
KLL M G +T ++ +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 374 LCGYASAITETLQTHAIAVK-LSF-QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
C + A+ H + ++ SF + +V NSLI+ YS+C ++ A F+ E L
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYF 489
TW S+I +A++ ++E+ + + ++ML G P+ ++ +L A G + G H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 490 NLMTSVYQ---IVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
L Y+ I+ +S LVD+ + G I A + SM
Sbjct: 449 ILRRQSYKDCLILWNS-----LVDMYAKSGEIIAAKRVFDSM 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 247 EAFSMFNLLRMDGANGDEFTFSS--LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
EAF F+LLR + + +SS LLS C + G+ H+ + + D ++
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
L+ Y+ + +A+ + + I + + WN +I E + + + M+ +G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
E T S I C H S + L V N+LIS Y + G + A + F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
E D V+W ++I+ Y + +A ++ ++M GV V++ + C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 278/582 (47%), Gaps = 45/582 (7%)
Query: 72 FLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR 131
F+P G+QLHAH I G L ++++ Y +++A + + + + WN++I
Sbjct: 99 FVP-GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLI- 156
Query: 132 GVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
G R+ S VS +KRM+ + + D T+ +I +C + G +H
Sbjct: 157 GSYIRNKRFQES----VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
+ +V AL+ +Y + G V+ ARR F + RD V N +I+CY EAF +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 252 FNLLRMDGANGDEFTFSSL-----------------------------------LSVCDT 276
+ + + G T++++ L C
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 277 LEYYDIGKLAHSLILRQ-AFDSDV-LVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
+ GK+ H L++R +F D+ V ++LI MY++ ++ A VF ++ ++ WN
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA-IAVK 393
+II G E LL++ML GF P+ +T++S + L + + H I +
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
S+++ L + NSL+ Y+K G I +A + F + D VT+TSLI Y G+ E A
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
F+ M G+ PD V+ + VLSAC+H LV +G F M V+ I +HY+C+VDL
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYC 572
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFI-IEPEKSVNYA 572
R G +D+A ++ ++P E S + +C +H N + EWAA+KL + +PE +Y
Sbjct: 573 RAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYM 632
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQV 614
++++YA W + + + ++ D G K + +E +++
Sbjct: 633 LLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 210/494 (42%), Gaps = 67/494 (13%)
Query: 22 AQCFSNSSH--QPHPWS----------RLRASVSVPDQTLFRDPDTVHLFCANALKVSAK 69
AQ + +S P PW+ R + SVSV + + + + +K A
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 70 RAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
G+ +H + L + N ++S+Y + +++ A +LFD + R+ VSWN +
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN-IG-----VGI 183
I + ++ L RM L V VT+N + G C++ N IG VG+
Sbjct: 257 INCYTSEEKLGEAFKLL-----DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM 311
Query: 184 Q-----------------------------LHCYTVK---VGFDLDCFVGCALVDLYAKC 211
+ HC ++ D+D V +L+ +Y++C
Sbjct: 312 RNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRC 370
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
+ +A F V L N +IS +A N EE + + + G + + T +S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 272 SVCDTLEYYDIGKLAHSLIL-RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
+ + GK H IL RQ++ +++ ++L++MYAK+ I A+ VFD M R+
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE-----TL 385
V + ++I G G G G L +DM R G PD +T+ + +S C +++ + E T
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAYAFH 444
H ++L + + + ++ Y + G + A F + EP +L+ A H
Sbjct: 551 MEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 445 GQAEKATEMFEKML 458
G +K+L
Sbjct: 607 GNTNIGEWAADKLL 620
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 175/402 (43%), Gaps = 47/402 (11%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
L+ +CV F+ G QLH + + G + D + LV Y+ L++ A+
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+ NV+I Y N +E+ S++ + G DEFT+ S++ C L + G++ H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 289 LILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
I + ++ V +ALI+MY + + AR +FD M R+ V+WN II + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 349 VLKLLRDMLREGFSPDELTISST-----------------------------------IS 373
KLL M G +T ++ +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 374 LCGYASAITETLQTHAIAVK-LSF-QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
C + A+ H + ++ SF + +V NSLI+ YS+C ++ A F+ E L
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYF 489
TW S+I +A++ ++E+ + + ++ML G P+ ++ +L A G + G H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 490 NLMTSVYQ---IVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
L Y+ I+ +S LVD+ + G I A + SM
Sbjct: 449 ILRRQSYKDCLILWNS-----LVDMYAKSGEIIAAKRVFDSM 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 247 EAFSMFNLLRMDGANGDEFTFSS--LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
EAF F+LLR + + +SS LLS C + G+ H+ + + D ++
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
L+ Y+ + +A+ + + I + + WN +I E + + + M+ +G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR 424
E T S I C H S + L V N+LIS Y + G + A + F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 425 LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
E D V+W ++I+ Y + +A ++ ++M GV V++ + C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 209/382 (54%), Gaps = 7/382 (1%)
Query: 265 FTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVASALINMYAKNENITDARGVFD 323
TF L+ C ++ +GK H +++ F SD V + ++ +Y +++ + DAR VFD
Sbjct: 117 LTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD 176
Query: 324 EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
E+ +VV W+ ++ G G GSE L++ R+ML +G PDE ++++ ++ C A+ +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQ 236
Query: 384 TLQTHAIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
H K S+ E + V +L+ Y+KCG I +A++ F+ ++ +W +LI YA
Sbjct: 237 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296
Query: 443 FHGQAEKATEMFEKM-LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
+G A+KA E++ G+ PD V LGVL+ACAH G + +G M + Y+I P
Sbjct: 297 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK 356
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
+HY+C+VDL+ R G +D+A L+ MP++ + GA + C+ H N+ L E A + L
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 416
Query: 562 IIEP----EKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
+E E+ +SNIY S + + R MI +G K PG S +EV V F
Sbjct: 417 DLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKF 476
Query: 618 VSRDKTHPKALEMYATLKMLHV 639
VS D +HP L+++ + +L V
Sbjct: 477 VSGDVSHPNLLQIHTVIHLLSV 498
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 158/318 (49%), Gaps = 17/318 (5%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKC----KEIEDADKLFDELPGRNVVSWNIMIRG 132
K H+ I G +++L+ +L K A +FD + N ++ MIR
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR- 86
Query: 133 VAGRDNENDSSAP-LCVSYFKRMLLEK---VVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
+ R SS P L + YF M+ E+ + P Y+TF+ LI +C++ VG Q+HC+
Sbjct: 87 ICSR-----SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 189 TVKVG-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
VK G F D V ++ +Y + L+ +AR+ F +P D+V +V+++ Y L E
Sbjct: 142 VVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSE 201
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF-DSDVLVASALI 306
+F + + G DEF+ ++ L+ C + GK H + ++++ +SDV V +AL+
Sbjct: 202 GLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALV 261
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDE 365
+MYAK I A VF ++ RNV +W +I G YG + + L + RE G PD
Sbjct: 262 DMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDS 321
Query: 366 LTISSTISLCGYASAITE 383
+ + ++ C + + E
Sbjct: 322 VVLLGVLAACAHGGFLEE 339
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 264/524 (50%), Gaps = 33/524 (6%)
Query: 100 SVYLKCKEIED----ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
++ L+C I + AD LFDELP R++ S N + N ND+ A +
Sbjct: 22 NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF-------LQ 74
Query: 156 LEKVVPDYV--TFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
+ + PD TF ++G+C G Q+H +K G + AL+D+Y+K G
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGH 134
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV 273
+ ++ R F +V +DLV N ++S + N +EA +F + + EFT SS++
Sbjct: 135 LVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 274 CDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVA 332
C +L+ GK H++++ D V++ +A+I+ Y+ I +A V++ + + + V
Sbjct: 195 CASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV 392
N++I GC + E L M R+ P+ +SS+++ C S + Q H +A+
Sbjct: 254 LNSLISGCIRNRNYKEAFLL---MSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 393 KLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATE 452
+ F + N L+ Y KCG I A FR +V+WTS+I AYA +G KA E
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 453 MFEKML--SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVD 510
+F +M GV+P+ V+FL V+SACAH GLV +G F +M Y++VP ++HY C +D
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFID 428
Query: 511 LLGRYGLIDEAFELLRSMPVEVESDTLG-------AFIGSCKLHANIGLAEWAAEKLF-I 562
+L + G +E + L+ M +E+D A + +C L+ ++ E+ A +L
Sbjct: 429 ILSKAGETEEIWRLVERM---MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEE 485
Query: 563 IEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
PE + Y +SN YA+ W VE R + +KG K G S
Sbjct: 486 TGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 49 LFRDPDTVHLFC-ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKE 107
++R+ + F ++ +K A L +GKQ+HA ++ G ++ L ++S Y
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGL 234
Query: 108 IEDADKLFDELPGRNVVSWNIMIRGVAGR--DNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
I +A K+++ L NV + +M+ + N N A L L+ + P+
Sbjct: 235 INEAMKVYNSL---NVHTDEVMLNSLISGCIRNRNYKEAFL--------LMSRQRPNVRV 283
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
+ + C ++ +G Q+HC ++ GF D + L+D+Y KCG + AR F A+P
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 226 CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN--GDEFTFSSLLSVC 274
+ +V MI YA+N +A +F + +G+ + TF ++S C
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 222/422 (52%), Gaps = 7/422 (1%)
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA-NGDEFTFSSLLSVCDTL 277
R F L CN MI ++L+ P E F +F LR + + + + S L C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
G H I F SD L+ + L+++Y+ EN TDA VFDE+ R+ V+WN ++
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN-VL 185
Query: 338 VGCGNYGDGSEVLKLLRDMLREGF----SPDELTISSTISLCGYASAITETLQTHAIAVK 393
C + + +L D ++ PD +T + C A+ Q H +
Sbjct: 186 FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
L+++N+L+S YS+CG++ A + F E ++V+WT+LI A +G ++A E
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTS-VYQIVPDSDHYTCLVDLL 512
F +ML G+ P+ + G+LSAC+H GLV +G+ +F+ M S ++I P+ HY C+VDLL
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 513 GRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYA 572
GR L+D+A+ L++SM ++ +S +G+C++H ++ L E L ++ E++ +Y
Sbjct: 366 GRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV 425
Query: 573 AMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYA 632
+ N Y++ W V R ++ +K PGCS IE+ VH F+ D +HP+ E+Y
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYK 485
Query: 633 TL 634
L
Sbjct: 486 ML 487
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 23/334 (6%)
Query: 63 ALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRN 122
ALK K L G Q+H + GF L ++ +Y C+ DA K+FDE+P R+
Sbjct: 119 ALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRD 178
Query: 123 VVSWNIM----IRGVAGRDNENDSSAPLCVSYFKRMLLEK---VVPDYVTFNGLIGSCVQ 175
VSWN++ +R RD + F +M + V PD VT + +C
Sbjct: 179 TVSWNVLFSCYLRNKRTRD---------VLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 176 FHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVM 235
+ G Q+H + + G + LV +Y++CG ++ A + F + R++V +
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF 295
IS A+N +EA FN + G + +E T + LLS C G + + F
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 296 --DSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD---GSEV 349
++ ++++ + + A + M ++ + W T++ C +GD G V
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERV 409
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
+ L ++ E + D + + +T S G +TE
Sbjct: 410 ISHLIELKAEE-AGDYVLLLNTYSTVGKWEKVTE 442
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD V C AL+ A L GKQ+H + + G L+L N ++S+Y +C ++ A
Sbjct: 215 PDGVT--CLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
++F + RNVVSW +I G+A + + F ML + P+ T GL+ +
Sbjct: 273 QVFYGMRERNVVSWTALISGLA-----MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 173 CVQFHNIGVGI----QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
C + G+ ++ K+ +L + GC +VDL + L++ A
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHY-GC-VVDLLGRARLLDKA 374
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 224/432 (51%), Gaps = 18/432 (4%)
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G++ +A + FC + +++V+ MI+ Y LN A F+L D +++++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDL----SPERDIVLWNTMI 97
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDS----DVLVASALINMYAKNENITDARGVFDEMLI 327
S Y ++G + + R FD DV+ + ++ YA ++ VFD+M
Sbjct: 98 S-----GYIEMGNMLEA---RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 328 RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQ 386
RNV +WN +I G G SEVL + M+ EG P++ T++ +S C A
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 387 THAIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHG 445
H L + + ++V N+LI Y KCG I A++ F+ + DL++W ++I+ A HG
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 446 QAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY 505
+A +F +M + G+ PD+V+F+GVL AC H GLV GL YFN M + + I+P+ +H
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 506 TCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEP 565
C+VDLL R G + +A E + MPV+ ++ +G+ K++ + + E A E+L +EP
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Query: 566 EKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHP 625
N+ +SNIY + D + + D G K G SWIE + + F S + HP
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHP 449
Query: 626 KALEMYATLKML 637
+ E+ L+ L
Sbjct: 450 RTEELQRILREL 461
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 28/387 (7%)
Query: 82 HLIKFGFCHVLSLQNQILSVYLKC--KEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNE 139
LI C SL NQ+ + C I A+K+F E+ +NVV W MI G N+
Sbjct: 17 ELITHAKCSTESL-NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL--LNK 73
Query: 140 NDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI----GVGIQLHCYTVKVGFD 195
+ SA +R D V +N +I ++ N+ + Q+ C
Sbjct: 74 DLVSA-------RRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR------- 119
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
D +++ YA G +E R F +P R++ N +I YA N E F +
Sbjct: 120 -DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 256 RMDGA-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS-DVLVASALINMYAKNE 313
+G+ ++ T + +LS C L +D GK H ++ DV V +ALI+MY K
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS 373
I A VF + R++++WNT+I G +G G+E L L +M G SPD++T +
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 374 LCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDL 431
C + + + L +++ S + ++ S+ G +T A++ ++ + D
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKML 458
V W +L+ A + + + E+++
Sbjct: 359 VIWATLLGASKVYKKVDIGEVALEELI 385
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 278/557 (49%), Gaps = 13/557 (2%)
Query: 62 NALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
+ L V + F EG Q+H +I GF + +++ ++ +Y + ++ A KLFDE+ R
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
N+ N+++R + S L Y RM LE V + +T+ +I C +
Sbjct: 177 NLAVCNLLLRCFC----QTGESKRLFEVYL-RMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 182 GIQLHCYTVKVGFDL-DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
G QLH VK G+++ + FV LVD Y+ CG + + R+F AVP +D++ N ++S A
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD-SDV 299
++ +F+ ++ G F S L+ C GK H +L+ FD S +
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
V SALI+MY K I ++ ++ + N+ N+++ + G +++++ M+ E
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE 411
Query: 360 GFSPDELTISSTISLCGYASAITETLQT----HAIAVKLSFQEFLSVANSLISAYSKCGN 415
G DE+T+S+ + + ++ E+L + H A+K + ++V+ SLI AY+K G
Sbjct: 412 GTGIDEVTLSTVLK--ALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQ 469
Query: 416 ITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
+ K F + P++ TS+I+ YA +G +M +M ++PD V+ L VLS
Sbjct: 470 NEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSG 529
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD 535
C+H GLV +G F+ + S Y I P Y C+VDLLGR GL+++A LL + +
Sbjct: 530 CSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCV 589
Query: 536 TLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIG 595
+ + SC++H N + AAE L +EPE Y +S Y D+ R++
Sbjct: 590 AWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAA 649
Query: 596 DKGDAKVPGCSWIEVAN 612
+ + G S + V N
Sbjct: 650 SRELMREIGYSSVVVKN 666
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 1/326 (0%)
Query: 205 VDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDE 264
+D K G + +A AF + RD+V N++IS + A ++ + G
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 265 FTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE 324
TF S+LSVC + G H ++ F ++ V SAL+ +YA + A +FDE
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 325 MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET 384
ML RN+ N ++ G+ + ++ M EG + + LT I C + + E
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 385 LQTHAIAVKLSFQ-EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAF 443
Q H++ VK + + VAN L+ YS CG+++ +++ F E D+++W S++ A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 444 HGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD 503
+G + ++F KM G P F+ L+ C+ + G + + V
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 504 HYTCLVDLLGRYGLIDEAFELLRSMP 529
+ L+D+ G+ I+ + L +S+P
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLP 378
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 241/516 (46%), Gaps = 47/516 (9%)
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL--DCFVGCALVDLYAKCGLVENARRA 220
Y L+ C + G +LH G ++ AL YA G + A++
Sbjct: 6 YQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKL 65
Query: 221 FCAVPC--RDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
F +P +D V ++S ++ L + +F +R D+ + L VC LE
Sbjct: 66 FDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLE 125
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKN-------------------------- 312
+ H + ++ + V V +AL++MY K
Sbjct: 126 DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185
Query: 313 -----ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDML-REGFSPDEL 366
E + R VF EM RN VAW ++ G G EVL+LL +M+ R G + +
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 367 TISSTISLCGYASAITETLQTHAIAVK--------LSFQEFLSVANSLISAYSKCGNITS 418
T+ S +S C + + H A+K S+ + + V +L+ Y+KCGNI S
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM-VGTALVDMYAKCGNIDS 304
Query: 419 ALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH 478
++ FRL + ++VTW +L A HG+ +MF +M+ V PD ++F VLSAC+H
Sbjct: 305 SMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSH 363
Query: 479 CGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLG 538
G+V +G F+ + Y + P DHY C+VDLLGR GLI+EA L+R MPV LG
Sbjct: 364 SGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG 422
Query: 539 AFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKG 598
+ +GSC +H + +AE +L + P + MSN+Y ++ + R + +G
Sbjct: 423 SLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRG 482
Query: 599 DAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATL 634
K+PG S I V + VH F S D++HP+ E+Y L
Sbjct: 483 IRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 184/440 (41%), Gaps = 50/440 (11%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLS--LQNQILSVYLKCKEIEDADKLFDELP-- 119
L+ A R+FL GK+LHA L G L N + Y E+ A KLFDE+P
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 120 GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNI 179
++ V W ++ + +S + F M ++V D V+ L G C + ++
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNS-----MKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDL 127
Query: 180 GVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV------------------------- 214
G Q H VK+G V AL+D+Y KCGLV
Sbjct: 128 GFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 215 ------ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF-TF 267
E R F +P R+ V VM++ Y E + + +G F T
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 268 SSLLSVCDTLEYYDIGKLAHSLILR-------QAFDSDVLVASALINMYAKNENITDARG 320
S+LS C +G+ H L+ +A DV+V +AL++MYAK NI +
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
VF M RNVV WN + G +G G V+ + M+RE PD+LT ++ +S C ++
Sbjct: 308 VFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGI 366
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIH 439
+ E + + + ++ + G I A R + P+ V SL+
Sbjct: 367 VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 440 AYAFHGQAEKATEMFEKMLS 459
+ + HG+ E A + +++
Sbjct: 427 SCSVHGKVEIAERIKRELIQ 446
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 235/492 (47%), Gaps = 39/492 (7%)
Query: 159 VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR 218
V D + + ++ +C + + G+Q+H + K G D F+ L+ LY KCG + +R
Sbjct: 117 VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSR 176
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTL 277
+ F +P RD V N MI Y L A +F+L+ M+ N +++S++S T
Sbjct: 177 QMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN--LISWNSMISGYAQTS 234
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
+ DI S + + D++ +++I+ Y K+ I DA+G+FD M R+VV W T+I
Sbjct: 235 DGVDIA----SKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMI 290
Query: 338 VGCGNYG-------------------------------DGSEVLKLLRDMLREG-FSPDE 365
G G E L++ DM +E PD+
Sbjct: 291 DGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDD 350
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRL 425
T+ + +++ + H V+ F + +LI YSKCG+I A+ F
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG 485
E + W ++I A HG E A +M ++ + PD ++F+GVL+AC+H GLV +G
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 486 LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCK 545
L F LM ++I P HY C+VD+L R G I+ A L+ MPVE F+ +C
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 546 LHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGC 605
H E A+ L + +Y +SN+YAS W DV R M+ ++ K+PGC
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 606 SWIEVANQVHSF 617
SWIE+ +VH F
Sbjct: 591 SWIELDGRVHEF 602
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 186/454 (40%), Gaps = 59/454 (12%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-- 121
LK ++ F+ G Q+H L K G L LQN ++ +YLKC + + ++FD +P R
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 122 -------------------------------NVVSWNIMIRGVAGRDNENDSSAPLCVSY 150
N++SWN MI G A + D ++ L
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL----DCFVGCALVD 206
++ D +++N +I V+ I K FD+ D ++D
Sbjct: 248 PEK--------DLISWNSMIDGYVKHGRI--------EDAKGLFDVMPRRDVVTWATMID 291
Query: 207 LYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDG-ANGDEF 265
YAK G V +A+ F +P RD+V N M++ Y N EA +F+ + + D+
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 266 TFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM 325
T +L L H I+ + F + ALI+MY+K +I A VF+ +
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI 411
Query: 326 LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETL 385
+++ WN +I G +G G +L + R PD++T ++ C ++ + E L
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGL 471
Query: 386 QT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAF 443
+ K + L ++ S+ G+I A + EP+ V W + + A +
Sbjct: 472 LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSH 531
Query: 444 HGQAEKATEMFEK--MLSCGVVPDRVSFLGVLSA 475
H + E E+ K +L G P L + A
Sbjct: 532 HKEFETG-ELVAKHLILQAGYNPSSYVLLSNMYA 564
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 199/379 (52%), Gaps = 2/379 (0%)
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+ N ++ Y + P +A ++ + D ++ ++ + + +GK HS+
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+R F D S I +Y K +AR VFDE R + +WN II G + G +E +
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF--LSVANSLIS 408
++ DM R G PD+ T+ S + CG ++ Q H ++ +E + + NSLI
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 409 AYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
Y KCG + A F + ++V+W+S+I YA +G +A E F +M GV P++++
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
F+GVLSAC H GLV +G YF +M S +++ P HY C+VDLL R G + EA +++ M
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 529 PVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVE 588
P++ G +G C+ ++ +AEW A + +EP Y ++N+YA + W DVE
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 589 SARKMIGDKGDAKVPGCSW 607
RK++ K AK+P S+
Sbjct: 444 RVRKLMKTKKVAKIPAYSY 462
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 11/330 (3%)
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL 185
WN ++R ++ D+ + + M+ V+PD + +I + VQ H+ +G +L
Sbjct: 85 WNNIMRSYIRHESPLDA-----IQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP 245
H V++GF D F + LY K G ENAR+ F P R L N +I
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD--SDVLVAS 303
EA MF ++ G D+FT S+ + C L + H +L+ + SD+++ +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+LI+MY K + A +F+EM RNVV+W+++IVG G+ E L+ R M G P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSF--QEFLSVANSLISAYSKCGNITSALK 421
+++T +S C + + E +T+ +K F + LS ++ S+ G + A K
Sbjct: 320 NKITFVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 422 CF-RLTEEPDLVTWTSLIHAYAFHGQAEKA 450
+ +P+++ W L+ G E A
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 15/277 (5%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV-- 133
GK+LH+ ++ GF ++ +++Y K E E+A K+FDE P R + SWN +I G+
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLH--CYTVK 191
AGR NE V F M + PD T + SC ++ + QLH K
Sbjct: 196 AGRANE-------AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSM 251
D + +L+D+Y KCG ++ A F + R++V + MI YA N EA
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA--SALINMY 309
F +R G ++ TF +LS C + GK + +++ F+ + ++ ++++
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLL 367
Query: 310 AKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+++ + +A+ V +EM ++ NV+ W ++ GC +GD
Sbjct: 368 SRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 269/570 (47%), Gaps = 31/570 (5%)
Query: 90 HVLSLQNQILSVYLKCKE----IEDADKLFDELPGRN-VVSWNIMIRGVAGRDNENDSSA 144
H + QI + +L I A KLFD+ P R+ N MI+ DS A
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 145 PLCVSYFKRMLLEK-VVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCA 203
++ + E PD TF L SC + G+QLH + GF D +V
Sbjct: 64 -----LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG 118
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
+VD+YAK G + AR AF +P R V +IS Y + A +F+ + D
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKD 175
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD----SDVLVASALINMYAKNENITDAR 319
+++++ + G + + R+ FD V+ + +I+ Y ++I AR
Sbjct: 176 VVIYNAMMD-----GFVKSGDMTSA---RRLFDEMTHKTVITWTTMIHGYCNIKDIDAAR 227
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGFSPDELTISSTISLCGYA 378
+FD M RN+V+WNT+I G E ++L ++M PD++TI S +
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 379 SAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLI 438
A++ H + + + V +++ YSKCG I A + F E + +W ++I
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
H YA +G A A ++F M+ PD ++ L V++AC H GLV +G +F++M + +
Sbjct: 348 HGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GL 405
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
+HY C+VDLLGR G + EA +L+ +MP E L +F+ +C + +I AE +
Sbjct: 406 NAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILK 465
Query: 559 KLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFV 618
K +EP+ NY + N+YA+ + W D + ++ K GCS IE+ V F+
Sbjct: 466 KAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFI 525
Query: 619 SRDKTHPKALEMYATLK--MLHVCLDTSCW 646
S D THP ++ L ++H+ + W
Sbjct: 526 SGDTTHPHRRSIHLVLGDLLMHMNEEKYNW 555
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 23/388 (5%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
+G QLH+ + +FGFC + + ++ +Y K ++ A FDE+P R+ VSW +I G
Sbjct: 96 QGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI 155
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
R E D ++ L F +M V D V +N ++ V+ ++ +L F
Sbjct: 156 -RCGELDLASKL----FDQM---PHVKDVVIYNAMMDGFVKSGDMTSARRL--------F 199
Query: 195 D----LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
D ++ Y ++ AR+ F A+P R+LV N MI Y N P+E
Sbjct: 200 DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 251 MFNLLRMDGA-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
+F ++ + + D+ T S+L +G+ H + R+ D V V +A+++MY
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 310 AKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
+K I A+ +FDEM + V +WN +I G G+ L L M+ E PDE+T+
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITML 378
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEE 428
+ I+ C + + E + + ++ + ++ + G++ A + E
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFE 438
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEK 456
P+ + +S + A + E+A + +K
Sbjct: 439 PNGIILSSFLSACGQYKDIERAERILKK 466
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 219/440 (49%), Gaps = 33/440 (7%)
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN--GDEFTFSSLLSVCDTLEYYDIGKLA 286
L N MI + + +PE++F + + G + D +T + L+ C L + G
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 287 HSLILRQAFDSDVLVASALINMYA-------------------------------KNENI 315
H + +R+ FD+D V + LI++YA + ++
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 316 TDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
AR +F+ M R+ +AWN +I G G+ E L + M EG + + + S +S C
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWT 435
A+ + H+ + + + +A +L+ Y+KCG++ A++ F EE ++ TW+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
S ++ A +G EK E+F M GV P+ V+F+ VL C+ G V +G +F+ M +
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEW 555
+ I P +HY CLVDL R G +++A +++ MP++ + + + + +++ N+ L
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVL 430
Query: 556 AAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVH 615
A++K+ +E Y +SNIYA DW +V R+ + KG K PGCS +EV +VH
Sbjct: 431 ASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 616 SFVSRDKTHPKALEMYATLK 635
F DK+HPK ++ A K
Sbjct: 491 EFFVGDKSHPKYTQIDAVWK 510
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 185/427 (43%), Gaps = 54/427 (12%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED------ADKLFDELPGRNVVSWNI 128
E +Q+HA L G + ++ ++K + D A+++ D + + N
Sbjct: 21 EVRQIHAKLYVDGTLK----DDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEK---VVPDYVTFNGLIGSCVQFHNIGVGIQL 185
MIR S P F R +L + PD T N L+ +C G+Q+
Sbjct: 77 MIRA------HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 186 HCYTVKVGFDLDCFVGCALVDLYA-------------------------------KCGLV 214
H T++ GFD D V L+ LYA +CG V
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 215 ENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC 274
AR+ F +P RD + N MIS YA EA ++F+L++++G + S+LS C
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 275 DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
L D G+ AHS I R V +A+ L+++YAK ++ A VF M +NV W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
+ + G G G + L+L M ++G +P+ +T S + C + E Q H +++
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRN 369
Query: 395 SF--QEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
F + L L+ Y++ G + A+ ++ +P W+SL+HA + E
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 452 EMFEKML 458
+KML
Sbjct: 430 LASKKML 436
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L +G+ H+++ + + L ++ +Y KC ++E A ++F + +NV +W+ + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+A + C+ F M + V P+ VTF ++ C + G Q H +++
Sbjct: 316 LA-----MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRN 369
Query: 193 GFDLDCFV---GCALVDLYAKCGLVENARRAFCAVPCR 227
F ++ + GC LVDLYA+ G +E+A +P +
Sbjct: 370 EFGIEPQLEHYGC-LVDLYARAGRLEDAVSIIQQMPMK 406
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 266/561 (47%), Gaps = 55/561 (9%)
Query: 77 KQLHAHLIKFGFCHVLS--LQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
+ +HA +++ G VLS + Q++S K + + +F RN N +IRG+
Sbjct: 46 RHVHAQILRRG---VLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLT 102
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
+N S+ V +F ML V PD +TF ++ S + +G LH T+K
Sbjct: 103 --ENARFESS---VRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFV 157
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFS 250
D D FV +LVD+YAK G +++A + F P R +++ NV+I+ Y C ++
Sbjct: 158 DCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY---CRAKDMHM 214
Query: 251 MFNLLR-MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
L R M N + S LI Y
Sbjct: 215 ATTLFRSMPERNSGSW-------------------------------------STLIKGY 237
Query: 310 AKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
+ + A+ +F+ M +NVV+W T+I G GD + +ML +G P+E TI+
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP 429
+ +S C + A+ ++ H + + ++ +L+ Y+KCG + A F
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
D+++WT++I +A HG+ +A + F +M+ G PD V FL VL+AC + V GL++F
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
+ M Y I P HY +VDLLGR G ++EA EL+ +MP+ + T A +CK H
Sbjct: 418 DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKG 477
Query: 550 IGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
AE ++ L ++PE +Y + +AS+ + DVE R + + + G S+IE
Sbjct: 478 YRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Query: 610 VANQVHSFVSRDKTHPKALEM 630
+ Q++ F + D +H E+
Sbjct: 538 LDGQLNKFSAGDYSHKLTQEI 558
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 259/549 (47%), Gaps = 10/549 (1%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G QLH +K G + N ++S+Y K K+FDE+ R+ VS+ +I
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC- 124
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG-VGIQLHCYT-VKVG 193
D + K M +P L+ C + + V H V
Sbjct: 125 ----QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDER 180
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
+ ALVD+Y K A F + ++ V MIS N E +F
Sbjct: 181 MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFR 240
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEY-YDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
++ + + T S+L C L Y + K H R +D + +A + MY +
Sbjct: 241 AMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
N++ +R +F+ +R+VV W+++I G GD SEV+ LL M +EG + +T+ + +
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
S C ++ ++ H+ +K F + + N+LI Y+KCG++++A + F E DLV
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
+W+S+I+AY HG +A E+F+ M+ G D ++FL +LSAC H GLV + F
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-Q 479
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
Y + +HY C ++LLGR+G ID+AFE+ +MP++ + + + +C+ H + +
Sbjct: 480 AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 553 A-EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVA 611
A + A +L EP+ NY +S I+ ++ E R+++ + K G S IE
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Query: 612 NQVHSFVSR 620
Q+ + +
Sbjct: 600 LQIEDYQGK 608
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 157/312 (50%), Gaps = 15/312 (4%)
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV-MCNVMISCY 239
+G QLHC +K G D D V +L+ +YAK R+ F + RD V C+++ SC
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSC- 123
Query: 240 ALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL-EYYDIGKLAHSLIL-RQAFDS 297
+ L EA + + G +SLL++C + + ++ H+L+L +
Sbjct: 124 CQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQE 183
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGC---GNYGDGSEVLKLLR 354
VL+++AL++MY K ++ A VFD+M ++N V+W +I GC NY G + L R
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG---VDLFR 240
Query: 355 DMLREGFSPDELTISSTISLC---GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
M RE P+ +T+ S + C Y S++ + + + E L+ A ++ Y
Sbjct: 241 AMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAA--FMTMYC 298
Query: 412 KCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
+CGN++ + F ++ D+V W+S+I YA G + + +M G+ + V+ L
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 472 VLSACAHCGLVT 483
++SAC + L++
Sbjct: 359 IVSACTNSTLLS 370
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 246 EEAFSMFNL-LRMDGANGDEFTFSSLLSVCD-TLEYYDIGKLAHSLILRQAFDSDVLVAS 303
+EA ++ L + G NG S++ C E + +G H L L+ D D +V++
Sbjct: 27 DEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSN 86
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+LI+MYAK R VFDEML R+ V++ +II C G E +KL+++M GF P
Sbjct: 87 SLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIP 146
Query: 364 DELTISSTISLC---GYASAITETLQTHAIA-VKLSFQEFLSVANSLISAYSKCGNITSA 419
++S ++LC G +S + HA+ V QE + ++ +L+ Y K + +A
Sbjct: 147 KSELVASLLALCTRMGSSSKVARMF--HALVLVDERMQESVLLSTALVDMYLKFDDHAAA 204
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
F E + V+WT++I + E ++F M + P+RV+ L VL AC
Sbjct: 205 FHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 207/382 (54%), Gaps = 7/382 (1%)
Query: 265 FTFSSLLSVCDTLEYYDIGKLAHSLILRQA-FDSDVLVASALINMYAKNENITDARGVFD 323
TF L+ C ++ +GK H +++ F SD V + ++ +Y +++ + DAR VFD
Sbjct: 117 LTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFD 176
Query: 324 EMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE 383
E+ +VV W+ ++ G G GSE L++ ++ML G PDE ++++ ++ C A+ +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 384 TLQTHAIAVKLSFQEF-LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYA 442
H K + E + V +L+ Y+KCG I +A++ F ++ +W +LI YA
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 443 FHGQAEKATEMFEKM-LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
+G A+KAT +++ G+ PD V LGVL+ACAH G + +G M + Y I P
Sbjct: 297 AYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPK 356
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
+HY+C+VDL+ R G +D+A +L+ MP++ + GA + C+ H N+ L E A + L
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLL 416
Query: 562 IIEP----EKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
+E E+ +SNIY S + + R MI +G K PG S +EV V F
Sbjct: 417 DLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKF 476
Query: 618 VSRDKTHPKALEMYATLKMLHV 639
VS D +HP L+++ + +L V
Sbjct: 477 VSGDVSHPNLLQIHTLIHLLSV 498
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKC----KEIEDADKLFDELPGRNVVSWNIMIRG 132
K H+ I G +++L+ +L K A +FD + N ++ MIR
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR- 86
Query: 133 VAGRDNENDSSAP-LCVSYFKRMLLEK---VVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
+ R SS P L + YF M+ E+ + P Y+TF+ LI +C++ VG Q+HC+
Sbjct: 87 ICSR-----SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCW 141
Query: 189 TVKVG-FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEE 247
VK G F D V ++ +Y + L+ +AR+ F +P D+V +V+++ Y L E
Sbjct: 142 VVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSE 201
Query: 248 AFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF-DSDVLVASALI 306
+F + + G DEF+ ++ L+ C + GK H + ++ + +SDV V +AL+
Sbjct: 202 GLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 307 NMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDE 365
+MYAK I A VF+++ RNV +W +I G YG + L + RE G PD
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 366 LTISSTISLCGYASAITE 383
+ + ++ C + + E
Sbjct: 322 VVLLGVLAACAHGGFLEE 339
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 235/489 (48%), Gaps = 34/489 (6%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLY-AKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
Q+H +K G D ++ A + A F + ++ + N +I ++ +
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 243 CLPEEAFSMF--NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
PE A S+F L T+ S+ L G+ H +++++ + D
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 301 VASALINMY-------------------------------AKNENITDARGVFDEMLIRN 329
+ + +++MY AK I A+ +FDEM RN
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
V+WN++I G G + L + R+M + PD T+ S ++ C Y A + H
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
V+ F+ V +LI Y KCG I L F + L W S+I A +G E+
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A ++F ++ G+ PD VSF+GVL+ACAH G V + +F LM Y I P HYT +V
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMV 402
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
++LG GL++EA L+++MPVE ++ + + +C+ N+ +A+ AA+ L ++P+++
Sbjct: 403 NVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETC 462
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALE 629
Y +SN YAS + + R ++ ++ K GCS IEV +VH F+S THPK+ E
Sbjct: 463 GYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAE 522
Query: 630 MYATLKMLH 638
+Y+ L +L+
Sbjct: 523 IYSLLDILN 531
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 206/506 (40%), Gaps = 93/506 (18%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADK---LFDELPGRNVVSWNIM 129
+ E KQ+HA LIK G +++L+ C D + +F + +N WN +
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLA--FCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEK--VVPDYVTFNGLIGSCVQFHNIGVGIQLHC 187
IRG + S + +S F ML V P +T+ + + + G QLH
Sbjct: 96 IRGFS-----RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 188 YTVKVGFDLDCFV-----------GC--------------------ALVDLYAKCGLVEN 216
+K G + D F+ GC +++ +AKCGL++
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 217 ARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDT 276
A+ F +P R+ V N MIS + N ++A MF ++ D FT SLL+ C
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 277 LEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTI 336
L + G+ H I+R F+ + +V +ALI+MY K I + VF+ + + WN++
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 337 IVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF 396
I+G N G + L ++ R G PD ++ ++ C ++
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS------------------ 372
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTE-----EPDLVTWTSLIHAYAFHGQAEKAT 451
G + A + FRL + EP + +T +++ G E+A
Sbjct: 373 -----------------GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAE 415
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD-HYTCLVD 510
+ + M V D V + +LSAC G V + ++ PD Y L +
Sbjct: 416 ALIKNM---PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK---KLDPDETCGYVLLSN 469
Query: 511 LLGRYGLIDEAFE---LLRSMPVEVE 533
YGL +EA E L++ +E E
Sbjct: 470 AYASYGLFEEAVEQRLLMKERQMEKE 495
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 255/550 (46%), Gaps = 41/550 (7%)
Query: 71 AFLPEGKQLHAHLIKFGF-CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
+F EG+ +H + ++ L + N ++ +Y KC A+ LF R++VSWN M
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYV-------TFNGLIGSCVQFHNIGVG 182
I + ++ + L ++VV +Y T ++ SC ++ G
Sbjct: 467 ISAFSQNG----------FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
+HC+ K+G F+ R RDL N +IS A +
Sbjct: 517 KSVHCWLQKLGDLTSAFL------------------RLETMSETRDLTSWNSVISGCASS 558
Query: 243 CLPEEAFSMFNLLRMDGA-NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
E+ F + +G D T +S L G+ H L ++ + D +
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
+ LI MY + ++I A VF + N+ +WN +I G EV +L R++ E
Sbjct: 619 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE-- 676
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
P+E+T +S + + +Q H ++ FQ V+ +L+ YS CG + + +K
Sbjct: 677 -PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 422 CFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACAHCG 480
FR + + W S+I A+ FHG EKA E+F+++ S + P++ SF+ +LSAC+H G
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 481 LVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAF 540
+ +GL Y+ M + + P ++H +VD+LGR G + EA+E + + ++ GA
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 541 IGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDA 600
+ +C H + L + AE LF +EP+ + Y +++N Y W + RKM+ D
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 601 KVPGCSWIEV 610
K+PG S I+V
Sbjct: 916 KLPGYSVIDV 925
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 167/644 (25%), Positives = 284/644 (44%), Gaps = 47/644 (7%)
Query: 25 FSNSSHQPHPWSRLRASVSVPDQTLF--------RDPDTVHLFCANALKVSAKRAFLPEG 76
FS H+ H S + + V+ LF R ++ +F + L+ R
Sbjct: 47 FSKRKHKRHFTSSVLSPVTPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETP 106
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
+ +H +K G L+ +++L+ Y + E+ + LFDEL ++V+ WN MI +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL--- 163
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
N+N V F M+ + D T + H LHC ++ G
Sbjct: 164 -NQNGRYIA-AVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN-VMISCYALNCLPEEAFSMFNLL 255
D + AL++LYAK + +A F + RD+V N +M C A N P ++ F +
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA-NGHPRKSLQYFKSM 280
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF--DSDVLVASALINMYAKNE 313
G D TFS ++S C ++E +G+ H L+++ + ++ V V +++I+MY+K
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPDELTISSTI 372
+ A VF+E++ R+V++ N I+ G G E +L M + PD T+ S
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 373 SLCGYASAITETLQTHAIAVKLSFQ-EFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
S+CG S E H V++ Q L V NS+I Y KCG T A F+ T DL
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKML---SCGVVPDRVSFLGVLSAC-----------A 477
V+W S+I A++ +G KA +F++++ SC + L +L++C
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF-SLSTVLAILTSCDSSDSLIFGKSV 519
Query: 478 HCGLVTKG-LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE--VES 534
HC L G L L D + ++ G E+ ++M E +
Sbjct: 520 HCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 579
Query: 535 DTLGAFIGSCKLHANIGLA-EWAAEKLFIIEPEKSVNYAAMSNIYASQRDWC-DVESARK 592
D + +G+ N+GL + I+ + ++ + N + C D+ESA K
Sbjct: 580 DLI-TLLGTISASGNLGLVLQGRCFHGLAIKSLRELD-TQLQNTLITMYGRCKDIESAVK 637
Query: 593 MIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKM 636
+ G D + CSW N V S +S++K + +++ LK+
Sbjct: 638 VFGLISDPNL--CSW----NCVISALSQNKAGREVFQLFRNLKL 675
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 261/531 (49%), Gaps = 34/531 (6%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++S Y K + I +A LF+++P RN VSW+ MI G ++ E DS+ L F++M
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFC-QNGEVDSAVVL----FRKMP 194
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
++ P GLI + + + + V DL + L+ Y + G VE
Sbjct: 195 VKDSSPLCALVAGLIKN-ERLSEAAWVLGQYGSLVSGREDL-VYAYNTLIVGYGQRGQVE 252
Query: 216 NARRAFCAVP---------------CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA 260
AR F +P C+++V N MI Y A +F+ ++
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK---- 308
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL-RQAFDSDVLVASALINMYAKNENITDAR 319
+ D ++++++ Y + ++ + L + + D + +++ YA N+ AR
Sbjct: 309 DRDTISWNTMID-----GYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELAR 363
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
F++ ++ V+WN+II D E + L M EG PD T++S +S
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV 423
Query: 380 AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLI 438
+ +Q H I VK + + V N+LI+ YS+CG I + + F + + +++TW ++I
Sbjct: 424 NLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
YAFHG A +A +F M S G+ P ++F+ VL+ACAH GLV + F M SVY+I
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
P +HY+ LV++ G +EA ++ SMP E + GA + +C+++ N+GLA AAE
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAE 602
Query: 559 KLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ +EPE S Y + N+YA W + R + K K G SW++
Sbjct: 603 AMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 192/503 (38%), Gaps = 105/503 (20%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N+ L+ ++ I +A +F++L RN V+WN MI G R N + R L
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQA----------RKL 93
Query: 156 LEKVVP--DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCG- 212
+ V+P D VT+N +I Y CG
Sbjct: 94 FD-VMPKRDVVTWNTMISG-----------------------------------YVSCGG 117
Query: 213 --LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA---------- 260
+E AR+ F +P RD N MIS YA N EA +F + A
Sbjct: 118 IRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGF 177
Query: 261 --NGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD----------------SDVLVA 302
NG+ + L + + L LI + D++ A
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
Query: 303 -SALINMYAKNENITDAR---------------GVFDEMLIRNVVAWNTIIVGCGNYGDG 346
+ LI Y + + AR G F E +NVV+WN++I GD
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV 297
Query: 347 SEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSL 406
+LL D ++ D TIS + GY ++ A+ ++ ++ S N +
Sbjct: 298 VSA-RLLFDQMK-----DRDTISWNTMIDGYVH-VSRMEDAFALFSEMPNRDAHS-WNMM 349
Query: 407 ISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
+S Y+ GN+ A F T E V+W S+I AY + ++A ++F +M G PD
Sbjct: 350 VSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDP 409
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLR 526
+ +LSA GLV L V ++PD + L+ + R G I E+ +
Sbjct: 410 HTLTSLLSAS--TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 527 SMPVEVESDTLGAFIGSCKLHAN 549
M ++ E T A IG H N
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGN 490
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
DP T+ + L S L G Q+H ++K V + N ++++Y +C EI ++
Sbjct: 408 DPHTL----TSLLSASTGLVNLRLGMQMHQIVVKTVIPDV-PVHNALITMYSRCGEIMES 462
Query: 112 DKLFDELP-GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
++FDE+ R V++WN MI G A N +++ ++ F M + P ++TF ++
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEA-----LNLFGSMKSNGIYPSHITFVSVL 517
Query: 171 GSC 173
+C
Sbjct: 518 NAC 520
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 210/407 (51%), Gaps = 3/407 (0%)
Query: 204 LVDLYAKCG-LVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF-NLLRMDGAN 261
LV Y+K L + F +P R++ N++I ++ + ++ +F + R
Sbjct: 72 LVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVR 131
Query: 262 GDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV 321
D+FT +L C G L H L L+ F S + V+SAL+ MY + AR +
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKL 191
Query: 322 FDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI 381
FD+M +R+ V + + G G+ L + R+M GF+ D + + S + CG A+
Sbjct: 192 FDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGAL 251
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAY 441
H ++ L++ N++ Y KC + A F D+++W+SLI Y
Sbjct: 252 KHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY 311
Query: 442 AFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
G + ++F++ML G+ P+ V+FLGVLSACAH GLV K YF LM Y IVP+
Sbjct: 312 GLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPE 370
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLF 561
HY + D + R GL++EA + L MPV+ + +GA + CK++ N+ + E A +L
Sbjct: 371 LKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELI 430
Query: 562 IIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWI 608
++P K+ Y ++ +Y++ + + ES R+ + +K +KVPGCS I
Sbjct: 431 QLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 170/421 (40%), Gaps = 52/421 (12%)
Query: 114 LFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIGS 172
+F +P RN+ SWNI+I G R S L F RM E V PD T ++ +
Sbjct: 89 VFWHMPYRNIFSWNIII-GEFSRSGFASKSIDL----FLRMWRESCVRPDDFTLPLILRA 143
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMC 232
C G +H +K+GF FV ALV +Y G + +AR+ F +P RD V+
Sbjct: 144 CSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLY 203
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
M Y +MF + G D SLL C L GK H +R
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
+ + + +A+ +MY K + A VF M R+V++W+++I+G G GD KL
Sbjct: 264 RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
+ML+EG P+ +T +S C +
Sbjct: 324 FDEMLKEGIEPNAVTFLGVLSACAHG---------------------------------- 349
Query: 413 CGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
G + + FRL +E P+L + S+ + G E+A + E M V PD
Sbjct: 350 -GLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAV 405
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP-DSDHYTCLVDLLGRYGLIDEAFELLRS 527
VLS C G V G + + Q+ P + +Y L L G DEA L +
Sbjct: 406 MGAVLSGCKVYGNVEVGE---RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQW 462
Query: 528 M 528
M
Sbjct: 463 M 463
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 137/306 (44%), Gaps = 10/306 (3%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G +H +K GF L + + ++ +Y+ ++ A KLFD++P R+ V + M G
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV- 211
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
A L ++ F+ M D V L+ +C Q + G +H + ++
Sbjct: 212 ----QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
L +G A+ D+Y KC +++ A F + RD++ + +I Y L+ +F +F+ +
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
+G + TF +LS C + L L+ ++ +++ + ++ +
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 316 TDARGVFDEMLIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+A ++M ++ + ++ GC YG+ ++ R++++ P + S ++L
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ--LKPRK--ASYYVTL 443
Query: 375 CGYASA 380
G SA
Sbjct: 444 AGLYSA 449
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L GK +H I+ C L+L N I +Y+KC ++ A +F + R+V+SW+ +I G
Sbjct: 251 LKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILG 310
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
D + F ML E + P+ VTF G++ +C
Sbjct: 311 YG-----LDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 247/535 (46%), Gaps = 8/535 (1%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG 132
L EG+ LH +K G +Q+ + S Y K +A F EL ++ SW +I
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+A + +S F M + + PD V + LI + + G H + ++
Sbjct: 306 LARSGDMEES-----FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR-DLVMCNVMISCYALNCLPEEAFSM 251
F LD V +L+ +Y K L+ A + FC + + N M+ Y + +
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK 311
F ++ G D + +S++S C + +GK H +++ + D + V ++LI++Y K
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 312 NENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
++T A +F E NV+ WN +I + + + L M+ E F P +T+ +
Sbjct: 481 MGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
+ C ++ H + + LS++ +LI Y+KCG++ + + F + D
Sbjct: 540 LMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDA 599
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
V W +I Y HG E A +F++M V P +FL +LSAC H GLV +G F L
Sbjct: 600 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-L 658
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIG 551
Y + P+ HY+CLVDLL R G ++EA + SMP + G + SC H
Sbjct: 659 KMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Query: 552 LAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
+ AE+ +P+ Y ++N+Y++ W + E AR+M+ + G K G S
Sbjct: 719 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 212/456 (46%), Gaps = 15/456 (3%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
++ +A +I G + + ++++S Y + + ++F + R++ WN +I+
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA---H 100
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK-VGFD 195
+ D + LC +F MLL PD+ T ++ +C + VG +H +K GFD
Sbjct: 101 FSNGDYARSLC--FFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+ VG + V Y+KCG +++A F +P RD+V +IS + N E +
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 256 RMDGANGDEFTFSSL---LSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
G++ D+ +L C L G+ H ++ S V S++ + Y+K+
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
N ++A F E+ ++ +W +II GD E + +M +G PD + IS I
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDL 431
+ G + + H ++ F +V NSL+S Y K ++ A K F R++EE +
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--LVTKGLHYF 489
W +++ Y K E+F K+ + G+ D S V+S+C+H G L+ K LH +
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
+ TS+ + + L+DL G+ G + A+ +
Sbjct: 459 VVKTSLDLTISVVN---SLIDLYGKMGDLTVAWRMF 491
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 190/414 (45%), Gaps = 20/414 (4%)
Query: 53 PDTVHLFC-ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
PD V + C N L K +P+GK H +I+ F ++ N +LS+Y K + + A
Sbjct: 329 PDGVVISCLINEL---GKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVA 385
Query: 112 DKLFDELPGR-NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
+KLF + N +WN M++G C+ F+++ + D + +I
Sbjct: 386 EKLFCRISEEGNKEAWNTMLKGYGKMKCHVK-----CIELFRKIQNLGIEIDSASATSVI 440
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
SC + +G LHCY VK DL V +L+DLY K G + A R FC +++
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVI 499
Query: 231 MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
N MI+ Y E+A ++F+ + + T +LL C + G++ H I
Sbjct: 500 TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYI 559
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+ ++ +++ALI+MYAK ++ +R +FD ++ V WN +I G G +GD +
Sbjct: 560 TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITET----LQTHAIAVKLSFQEFLSVANSL 406
L M P T + +S C +A + + L+ H VK + + + + L
Sbjct: 620 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY----SCL 675
Query: 407 ISAYSKCGNITSALKC-FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ S+ GN+ A + PD V W +L+ + HG+ E M E+ ++
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVA 729
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
++ LC + ++ + +A+ + E + VA+ LIS+Y+ G + + F L D
Sbjct: 30 SVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRD 89
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA-----HCGLVTKG 485
+ W S+I A+ +G ++ F ML G PD + V+SACA H G G
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 486 L 486
L
Sbjct: 150 L 150
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 244/491 (49%), Gaps = 13/491 (2%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
E ++H +++K G +++L+ + +I A +F+ + N+ +N MIRG +
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYS 101
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
D + S F ++ + + D +F + SC + + +G LH ++ GF
Sbjct: 102 ISDEPERA-----FSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGF 156
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAFCAVP-CRDLVMCNVMISCYALNCLPEEAFSMFN 253
+ + AL+ Y CG + +AR+ F +P D V + +++ Y A +F
Sbjct: 157 MVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR 216
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
++R + T S LS L + AH L ++ D D+ + +ALI MY K
Sbjct: 217 IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTG 276
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS 373
I+ AR +FD + ++VV WN +I G E + LLR M E P+ T +S
Sbjct: 277 GISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLS 336
Query: 374 LCGYASA--ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDL 431
C Y+ A + T+ +++ L A L+ Y+K G + A++ F ++ D+
Sbjct: 337 SCAYSEAAFVGRTVADLLEEERIALDAILGTA--LVDMYAKVGLLEKAVEIFNRMKDKDV 394
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKML--SCGVVPDRVSFLGVLSACAHCGLVTKGLHYF 489
+WT++I Y HG A +A +F KM +C V P+ ++FL VL+AC+H GLV +G+ F
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Query: 490 NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHAN 549
M Y P +HY C+VDLLGR G ++EA+EL+R++P+ +S A + +C+++ N
Sbjct: 455 KRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN 514
Query: 550 IGLAEWAAEKL 560
L E +L
Sbjct: 515 ADLGESVMMRL 525
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 12/392 (3%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-NVVSWNIMIRGVA 134
G+ LH ++ GF L+N ++ Y C +I DA K+FDE+P + V+++ ++ G
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
S L + F+ M +VV + T + + ++ H +K+G
Sbjct: 204 -----QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL 258
Query: 195 DLDCFVGCALVDLYAKCGLVENARRAF-CAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
DLD + AL+ +Y K G + +ARR F CA+ +D+V N MI YA L EE +
Sbjct: 259 DLDLHLITALIGMYGKTGGISSARRIFDCAIR-KDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
++ + + TF LLS C E +G+ L+ + D ++ +AL++MYAK
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVG 377
Query: 314 NITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG--FSPDELTISST 371
+ A +F+ M ++V +W +I G G +G E + L M E P+E+T
Sbjct: 378 LLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVV 437
Query: 372 ISLCGYASAITETLQTHAIAVK-LSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEP 429
++ C + + E ++ V+ SF + ++ + G + A + R L
Sbjct: 438 LNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITS 497
Query: 430 DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
D W +L+ A +G A+ + ++ G
Sbjct: 498 DSTAWRALLAACRVYGNADLGESVMMRLAEMG 529
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 211/390 (54%), Gaps = 25/390 (6%)
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD----SDVLVASALINMYAKNEN 314
G + D F +SLL++ Y G L + ++ FD D+ ++++N YAK
Sbjct: 92 GLDKDPFVRTSLLNM-----YSSCGDLRSA---QRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVG---CGNYGDGSEVLKLLRDML----REGF-SPDEL 366
I DAR +FDEM RNV++W+ +I G CG Y E L L R+M E F P+E
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKY---KEALDLFREMQLPKPNEAFVRPNEF 200
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-L 425
T+S+ +S CG A+ + HA K + + + +LI Y+KCG++ A + F L
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 426 TEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC-GVVPDRVSFLGVLSACAHCGLVTK 484
+ D+ ++++I A +G ++ ++F +M + + P+ V+F+G+L AC H GL+ +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSC 544
G YF +M + I P HY C+VDL GR GLI EA + SMP+E + G+ +
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 545 KLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPG 604
++ +I E A ++L ++P S Y +SN+YA W +V+ R + KG KVPG
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPG 440
Query: 605 CSWIEVANQVHSFVSRDKTHPKALEMYATL 634
CS++EV VH FV D++ ++ +YA L
Sbjct: 441 CSYVEVEGVVHEFVVGDESQQESERIYAML 470
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 171/380 (45%), Gaps = 56/380 (14%)
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHN---IGVG 182
WNI+IR + + +P +S + RM +V PD+ TF L+ S FHN + +G
Sbjct: 27 WNIIIRAIVHNVSSPQRHSP--ISVYLRMRNHRVSPDFHTFPFLLPS---FHNPLHLPLG 81
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKC------------------------------- 211
+ H + G D D FV +L+++Y+ C
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN-----GDEFT 266
GL+++AR+ F +P R+++ + +I+ Y + +EA +F +++ N +EFT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM- 325
S++LS C L + GK H+ I + + D+++ +ALI+MYAK ++ A+ VF+ +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 326 LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM-LREGFSPDELTISSTISLCGYASAITE- 383
++V A++ +I YG E +L +M + +P+ +T + C + I E
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 384 ----TLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLI 438
+ + S Q + ++ Y + G I A + EPD++ W SL+
Sbjct: 322 KSYFKMMIEEFGITPSIQHY----GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 439 HAYAFHGQAEKATEMFEKML 458
G + ++++
Sbjct: 378 SGSRMLGDIKTCEGALKRLI 397
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 33/341 (9%)
Query: 18 YSFVAQCFSNSSHQPHPWSRLRASVSV--PDQTLFRDPDTVHLFCANALKVSAKRAFLPE 75
+ F+ F N H P R A + + D+ F ++++ + SA+R F
Sbjct: 65 FPFLLPSFHNPLHLPLG-QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRG--V 133
G + L N +++ Y K I+DA KLFDE+P RNV+SW+ +I G +
Sbjct: 124 GSK------------DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEK-----VVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
G+ E + F+ M L K V P+ T + ++ +C + + G +H Y
Sbjct: 172 CGKYKE-------ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 189 TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC-RDLVMCNVMISCYALNCLPEE 247
K ++D +G AL+D+YAKCG +E A+R F A+ +D+ + MI C A+ L +E
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 248 AFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ-AFDSDVLVASAL 305
F +F+ + D N + TF +L C + GK +++ + + +
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 306 INMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+++Y ++ I +A M + +V+ W +++ G GD
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 37/192 (19%)
Query: 386 QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHG 445
+THA + + V SL++ YS CG++ SA + F + DL W S+++AYA G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 446 QAEKATEMFEKM---------------LSCG---------------------VVPDRVSF 469
+ A ++F++M + CG V P+ +
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
VLSAC G + +G + + Y + D T L+D+ + G ++ A + ++
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 530 VEVESDTLGAFI 541
+ + A I
Sbjct: 262 SKKDVKAYSAMI 273
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 204/421 (48%), Gaps = 38/421 (9%)
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG---DEFTFSSLLSVCDTLEY 279
A C L+ +S YA E+A ++F L+M + D FS L C
Sbjct: 6 ASSCTKLISLTKQLSSYANQGNHEQALNLF--LQMHSSFALPLDAHVFSLALKSCAAAFR 63
Query: 280 YDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII-- 337
+G H+ ++ F S+ V AL++MY K +++ AR +FDE+ RN V WN +I
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 338 -VGCGNYGDGSEV------------------------------LKLLRDMLREGFSPDEL 366
CG + E+ ++ R M+ F P+ +
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 367 TISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
T+ + +S C A + H+ A + + + + L+ AY +CG+I F
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
E+ D+V W+SLI AYA HG AE A + F++M V PD ++FL VL AC+H GL + L
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKL 546
YF M Y + DHY+CLVD+L R G +EA++++++MP + + T GA +G+C+
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 547 HANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
+ I LAE AA +L ++EPE NY + IY S + E R + + G PG S
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 607 W 607
W
Sbjct: 424 W 424
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 49/331 (14%)
Query: 162 DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF 221
D F+ + SC +G +H ++VK F + FVGCAL+D+Y KC V +AR+ F
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 222 CAVPCRDLVMCNVMISCY--------------ALNCLPEEAFSMFNLLRMDGANGDE--- 264
+P R+ V+ N MIS Y A++ +P E S FN + + G G E
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNE--SSFNAI-IKGLVGTEDGS 163
Query: 265 -------------------FTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
T +L+S C + + + K HS R + + S L
Sbjct: 164 YRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGL 223
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
+ Y + +I + VFD M R+VVAW+++I +GD LK ++M +PD+
Sbjct: 224 VEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 366 LTISSTISLCGYASAITETL-----QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSAL 420
+ + + C +A E L ++ S + + L+ S+ G A
Sbjct: 284 IAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY----SCLVDVLSRVGRFEEAY 339
Query: 421 KCFR-LTEEPDLVTWTSLIHAYAFHGQAEKA 450
K + + E+P TW +L+ A +G+ E A
Sbjct: 340 KVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 45/333 (13%)
Query: 50 FRDPDTVHLFCANALKVSAKRAFLPE-GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEI 108
F P H+F ALK S AF P G +HAH +K F + +L +Y KC +
Sbjct: 42 FALPLDAHVFSL-ALK-SCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSV 99
Query: 109 EDADKLFDELPGRNVVSWNIMIRGVA--GRDNE------------NDSS----------- 143
A KLFDE+P RN V WN MI G+ E N+SS
Sbjct: 100 SHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT 159
Query: 144 ---APLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV 200
+ + ++++M+ + P+ +T L+ +C + ++H Y + + +
Sbjct: 160 EDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQL 219
Query: 201 GCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGA 260
LV+ Y +CG + + F ++ RD+V + +IS YAL+ E A F + +
Sbjct: 220 KSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
Query: 261 NGDEFTFSSLLSVC-------DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNE 313
D+ F ++L C + L Y+ ++ LR + D S L+++ ++
Sbjct: 280 TPDDIAFLNVLKACSHAGLADEALVYFK--RMQGDYGLRASKDH----YSCLVDVLSRVG 333
Query: 314 NITDARGVFDEMLIRNVV-AWNTIIVGCGNYGD 345
+A V M + W ++ C NYG+
Sbjct: 334 RFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 225/449 (50%), Gaps = 17/449 (3%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
LI C N+ Q+H + +G + L+ L + L A +P
Sbjct: 15 LISKCKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHLSSTVCL-SYALSILRQIPNPS 70
Query: 229 LVMCNVMISCYALNCLPEE---AFSMFNLL---RMDGANGDEFTFSSLLSVCD-TLEYYD 281
+ + N +IS N + AFS+++ + R + +EFT+ SL +++
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 282 IGKLAHSLILR--QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG 339
G+ H+ +L+ + + D V +AL+ YA + +AR +F+ + ++ WNT++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK--LSFQ 397
N + ++L +R P+EL++ + I C + H +K L+
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKM 457
+F V SLI YSKCG ++ A K F + D+ + ++I A HG ++ E+++ +
Sbjct: 251 QF--VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 458 LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
+S G+VPD +F+ +SAC+H GLV +GL FN M +VY I P +HY CLVDLLGR G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 518 IDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNI 577
++EA E ++ MPV+ + +F+GS + H + E A + L +E E S NY +SNI
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 578 YASQRDWCDVESARKMIGDKGDAKVPGCS 606
YA W DVE R+++ D K PG S
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 31/400 (7%)
Query: 77 KQLHAHLIKFGFCH-------VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
KQ+HA +I G H +L L + + Y A + ++P +V +N +
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY--------ALSILRQIPNPSVFLYNTL 77
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEK---VVPDYVTFNGLI---GSCVQFHNIGVGI 183
I + N N + L S + ++L + V P+ T+ L G Q+H G +
Sbjct: 78 ISSIV--SNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRAL 135
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
H + D FV ALV YA CG + AR F + DL N +++ YA +
Sbjct: 136 HAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 244 ---LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
EE +F +RM +E + +L+ C L + G AH +L+ +
Sbjct: 196 EIDSDEEVLLLF--MRMQ-VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
V ++LI++Y+K ++ AR VFDEM R+V +N +I G +G G E ++L + ++ +G
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 361 FSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
PD T TIS C ++ + E LQ +++ + + L+ + G + A
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 420 LKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
+C ++ +P+ W S + + HG E+ + +L
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL 412
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 9/274 (3%)
Query: 76 GKQLHAHLIKF--GFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV 133
G+ LHAH++KF H +Q ++ Y C ++ +A LF+ + ++ +WN ++
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
A + E DS + + F RM +V P+ ++ LI SC G+ H Y +K
Sbjct: 192 ANSE-EIDSDEEVLL-LFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
L+ FVG +L+DLY+KCG + AR+ F + RD+ N MI A++ +E ++
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 254 LLRMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLVASALINMYAKN 312
L G D TF +S C D G ++ +S+ + V L+++ ++
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRS 366
Query: 313 ENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
+ +A +M ++ N W + + +GD
Sbjct: 367 GRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 216/409 (52%), Gaps = 6/409 (1%)
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
N++ Y+ + P E+ +++ ++ G ++ TF LL C + G+ +L+
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
FD DV V + LI++Y + +DAR VFDEM RNVV+WN+I+ G + V +
Sbjct: 142 HGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
+M+ + F PDE T+ +S CG ++ + + + + +L L A L+ Y+K
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTA--LVDMYAK 259
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS-CGVVPDRVSFLG 471
G + A F + ++ TW+++I A +G AE+A ++F KM+ V P+ V+FLG
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
VL AC+H GLV G YF+ M +++I P HY +VD+LGR G ++EA++ ++ MP E
Sbjct: 320 VLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE 379
Query: 532 VESDTLGAFIGSCKLHA---NIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVE 588
++ + +C +H + G+ E ++L +EP++S N ++N +A R W +
Sbjct: 380 PDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAA 439
Query: 589 SARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYATLKML 637
R+++ + K+ G S +E+ H F S + + +Y L +
Sbjct: 440 EVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLF 488
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 173/375 (46%), Gaps = 19/375 (5%)
Query: 82 HLIKF-GFCHVLSLQNQ--ILSVYLK------CKEIEDADKLFDELPGRNVVSWNIMIRG 132
HL++ G H+ SLQN I+S ++ K++ A L +WN++ RG
Sbjct: 28 HLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRG 87
Query: 133 VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
+ D+ +S + + M + P+ +TF L+ +C F + G Q+ +K
Sbjct: 88 YSSSDSPVES-----IWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 193 GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMF 252
GFD D +VG L+ LY C +AR+ F + R++V N +++ N F F
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF 202
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
+ DE T LLS C +GKL HS ++ + + + + +AL++MYAK+
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKS 260
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTISST 371
+ AR VF+ M+ +NV W+ +IVG YG E L+L M++E P+ +T
Sbjct: 261 GGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 372 ISLCGYASAITETLQT-HAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEP 429
+ C + + + + H + + + +++ + G + A ++ EP
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEP 380
Query: 430 DLVTWTSLIHAYAFH 444
D V W +L+ A + H
Sbjct: 381 DAVVWRTLLSACSIH 395
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 10/285 (3%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
LK A L G+Q+ ++K GF + + N ++ +Y CK+ DA K+FDE+ RNV
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNV 179
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
VSWN ++ + N L F M+ ++ PD T L+ +C N+ +G
Sbjct: 180 VSWNSIMTALVENGKLN-----LVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGK 232
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
+H + +L+C +G ALVD+YAK G +E AR F + +++ + MI A
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG 292
Query: 244 LPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLV 301
EEA +F+ +++ + TF +L C D G K H + ++
Sbjct: 293 FAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIH 352
Query: 302 ASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD 345
A++++ + + +A +M + V W T++ C + D
Sbjct: 353 YGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
WN + G + E + + +M R G P++LT + C +T Q
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
+K F + V N+LI Y C + A K F E ++V+W S++ A +G+
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACA--------------------HCGLVTK------- 484
E F +M+ PD + + +LSAC +C L T
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 485 --GLHYFNLMTSVYQIVPDSDHYT--CLVDLLGRYGLIDEAFELLRSMPVEVE-SDTLGA 539
GL Y L V++ + D + +T ++ L +YG +EA +L M E
Sbjct: 260 SGGLEYARL---VFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 540 FIGSCKLHANIGLAE------WAAEKLFIIEPEKSVNYAAMSNI 577
F+G ++ GL + EK+ I+P ++Y AM +I
Sbjct: 317 FLGVLCACSHTGLVDDGYKYFHEMEKIHKIKP-MMIHYGAMVDI 359
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/580 (26%), Positives = 262/580 (45%), Gaps = 87/580 (15%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILS--VYLKCKEIEDADKLFDELPGRNVVSWNIMI 130
+ E ++H LI G +Q LS +++ A K +L WN +I
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVI 80
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
RG + N S +S + +ML ++PD++T+ L+ S + N
Sbjct: 81 RGFSNSRNPEKS-----ISVYIQMLRFGLLPDHMTYPFLMKSSSRLSN-----------R 124
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K+G L C V K GL DL +CN +I Y A
Sbjct: 125 KLGGSLHCSV--------VKSGLE------------WDLFICNTLIHMYGSFRDQASARK 164
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F DE +L++ +++++ YA
Sbjct: 165 LF----------DEMPHKNLVT-----------------------------WNSILDAYA 185
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP-DELTIS 369
K+ ++ AR VFDEM R+VV W+++I G G+ ++ L++ M+R G S +E+T+
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 370 STISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT--E 427
S I C + A+ H + + + + SLI Y+KCG+I A F +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
E D + W ++I A HG ++ ++F KM + PD ++FL +L+AC+H GLV + H
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLH 547
+F + P S+HY C+VD+L R GL+ +A + + MP++ LGA + C H
Sbjct: 366 FFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Query: 548 ANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSW 607
N+ LAE +KL ++P Y ++N+YA + + S R+ + KG K+ G S
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 608 IEVANQVHSFVSRDKTHPKALEMYATLKMLHVCLDTSCWL 647
+++ H F++ DKTH + ++YA L++ T W+
Sbjct: 485 LDLDGTRHRFIAHDKTHFHSDKIYAVLQL------TGAWM 518
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 158/369 (42%), Gaps = 59/369 (15%)
Query: 18 YSFVAQCFSNSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGK 77
++FV + FSNS + S+SV Q L H+ +K S++ + G
Sbjct: 76 WNFVIRGFSNSRNP-------EKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG 128
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRD 137
LH ++K G L + N ++ +Y ++ A KLFDE+P +N+V+WN ++ A
Sbjct: 129 SLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSG 188
Query: 138 N------------END--SSAPLCVSYFKR-------------MLLEKVVPDYVTFNGLI 170
+ E D + + + Y KR M + + VT +I
Sbjct: 189 DVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI 248
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAF--CAVPCRD 228
+C + G +H Y + V L + +L+D+YAKCG + +A F +V D
Sbjct: 249 CACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD 308
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
+M N +I A + E+ +F+ +R + DE TF LL+ C +H
Sbjct: 309 ALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC-----------SHG 357
Query: 289 LILRQAF-------DSDVLVASA----LINMYAKNENITDARGVFDEMLIRNVVAW-NTI 336
++++A+ +S S ++++ ++ + DA EM I+ + +
Sbjct: 358 GLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGAL 417
Query: 337 IVGCGNYGD 345
+ GC N+G+
Sbjct: 418 LNGCINHGN 426
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 8/386 (2%)
Query: 253 NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
LL G + T++ LL C + Y GK H+ + F + + L+ +YA +
Sbjct: 97 GLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS 156
Query: 313 ENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
++ A +F + IR+++ WN +I G G E L + DM + PD+ T +S
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
C + + HA+ +K + + V ++L+ Y KC + + + F +++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
TWTSLI Y +HG+ + + FEKM G P+ V+FL VL+AC H GLV KG +F M
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
Y I P+ HY +VD LGR G + EA+E + P + G+ +G+C++H N+ L
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 396
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESA----RKMIGDKGDAKVPGCSWI 608
E AA K ++P NY +N YAS C + A R+ + + G K PG S I
Sbjct: 397 LELAATKFLELDPTNGGNYVVFANGYAS----CGLREAASKVRRKMENAGVKKDPGYSQI 452
Query: 609 EVANQVHSFVSRDKTHPKALEMYATL 634
E+ +VH F+ D +H + ++Y +
Sbjct: 453 ELQGEVHRFMKDDTSHRLSEKIYKKV 478
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 153/300 (51%), Gaps = 18/300 (6%)
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
+V P+ T+ L+ C Q G ++H VGF L+ ++ L+ LYA G ++ A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL 277
F ++ RDL+ N MIS Y L +E ++ +R + D++TF+S+ C L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 278 EYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
+ + GK AH++++++ S+++V SAL++MY K + +D VFD++ RNV+ W ++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF- 396
G G +G SEVLK M EG P+ +T ++ C + + + + H ++K +
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYG 341
Query: 397 -----QEFLSVANSLISAYSKCGNITSALKCFRLT---EEPDLVTWTSLIHAYAFHGQAE 448
Q + ++ ++L + G + A + + E P + W SL+ A HG +
Sbjct: 342 IEPEGQHYAAMVDTL----GRAGRLQEAYEFVMKSPCKEHPPV--WGSLLGACRIHGNVK 395
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDA 111
+P+T A L+ +R +GK++HA + GF L+ ++L +Y +++ A
Sbjct: 107 EPETY----AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 112 DKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIG 171
LF L R+++ WN MI G + E + L + Y R ++VPD TF +
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEG---LFIYYDMRQ--NRIVPDQYTFASVFR 217
Query: 172 SCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVM 231
+C + G + H +K + V ALVD+Y KC + R F + R+++
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD 275
+IS Y + E F ++ +G + TF +L+ C+
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 210/437 (48%), Gaps = 35/437 (8%)
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD--TLEYYDIGKLAHSLILRQ 293
I+ N EA F+ + + G + TF +LLS C T +G L H +
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 294 AFDSD-VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD------- 345
D + V+V +A+I MY+K AR VFD M +N V WNT+I G G
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 346 ------------------------GSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI 381
E L R+M G PD + I + ++ C A+
Sbjct: 163 FDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGAL 222
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAY 441
+ L H + F+ + V+NSLI Y +CG + A + F E+ +V+W S+I +
Sbjct: 223 SFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF 282
Query: 442 AFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
A +G A ++ F KM G PD V+F G L+AC+H GLV +GL YF +M Y+I P
Sbjct: 283 AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPR 342
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHA-NIGLAEWAAEKL 560
+HY CLVDL R G +++A +L++SMP++ +G+ + +C H NI LAE + L
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHL 402
Query: 561 FIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSR 620
+ + NY +SN+YA+ W R+ + G K PG S IE+ + +H F++
Sbjct: 403 TDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAG 462
Query: 621 DKTHPKALEMYATLKML 637
D H + + L+++
Sbjct: 463 DNAHVETTYIREVLELI 479
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQF--HNIGVGIQLHCYTVKVGFDLD-CFVGCALVDL 207
F M L V P+++TF L+ C F + +G LH Y K+G D + VG A++ +
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 208 YAK-------------------------------CGLVENARRAFCAVPCRDLVMCNVMI 236
Y+K G V+NA + F +P RDL+ MI
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
+ + EEA F +++ G D + L+ C L G H +L Q F
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
++V V+++LI++Y + + AR VF M R VV+WN++IVG G+ E L R M
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANS--LISAYSKCG 414
+GF PD +T + ++ C + + E L+ I +K ++ + + L+ YS+ G
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI-MKCDYRISPRIEHYGCLVDLYSRAG 357
Query: 415 NITSALKCFR-LTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
+ ALK + + +P+ V SL+ A + HG E K L+
Sbjct: 358 RLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLT 403
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 23/273 (8%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRML 155
N ++ Y++ ++++A K+FD++P R+++SW MI G + + ++ + +F+ M
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA-----LLWFREMQ 198
Query: 156 LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVE 215
+ V PDYV + +C + G+ +H Y + F + V +L+DLY +CG VE
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 216 NARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVC- 274
AR+ F + R +V N +I +A N E+ F ++ G D TF+ L+ C
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 275 ------DTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR 328
+ L Y+ I K + + R + L+++Y++ + DA + M ++
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPR------IEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 329 -NVVAWNTIIVGCGNYGD----GSEVLKLLRDM 356
N V +++ C N+G+ ++K L D+
Sbjct: 373 PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDL 405
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-- 387
V+W + I G +E K DM G P+ +T + +S CG ++ +E L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 388 HAIAVKLSF-QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
H A KL + + V ++I YSK G A F E+ + VTW ++I Y GQ
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 447 AEKATEMFEKMLS-------------------------------CGVVPDRVSFLGVLSA 475
+ A +MF+KM GV PD V+ + L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 476 CAHCGLVTKGL--HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
C + G ++ GL H + L V S+ L+DL R G ++ A ++ +M
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSN---SLIDLYCRCGCVEFARQVFYNM 267
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 14/191 (7%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD V + A L L G +H +++ F + + + N ++ +Y +C +E A
Sbjct: 204 PDYVAIIAA--LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGS 172
++F + R VVSWN +I G A N ++S + YF++M + PD VTF G + +
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHES-----LVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 173 CVQFHNIGVGIQLHCYTVKVGFDLDCFV---GCALVDLYAKCGLVENARRAFCAVPCR-- 227
C + G++ + +K + + + GC LVDLY++ G +E+A + ++P +
Sbjct: 317 CSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGC-LVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 228 DLVMCNVMISC 238
++V+ +++ +C
Sbjct: 375 EVVIGSLLAAC 385
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 7/466 (1%)
Query: 61 ANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPG 120
+N K A + L +G + HA IK G + + L+ ++ +Y KC ++ A ++FDE+
Sbjct: 218 SNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE 277
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLE-KVVPDYVTFNGLIGSCVQFHNI 179
R++V W MI G+A + ++ + F+ M+ E K+ P+ V ++ +
Sbjct: 278 RDIVVWGAMIAGLAHNKRQWEA-----LGLFRTMISEEKIYPNSVILTTILPVLGDVKAL 332
Query: 180 GVGIQLHCYTVKV-GFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISC 238
+G ++H + +K + FV L+DLY KCG + + RR F R+ + ++S
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD 298
YA N ++A ++ +G D T +++L VC L GK H L+ F +
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 452
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
V + ++L+ MY+K +FD + RNV AW +I D +++ R ML
Sbjct: 453 VSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLL 512
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
PD +T+ +++C A+ + H +K F+ V+ +I Y KCG++ S
Sbjct: 513 SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRS 572
Query: 419 ALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH 478
A F +TWT++I AY + A FE+M+S G P+ +F VLS C+
Sbjct: 573 ANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQ 632
Query: 479 CGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
G V + +FNLM +Y + P +HY+ +++LL R G ++EA L
Sbjct: 633 AGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 203/418 (48%), Gaps = 9/418 (2%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L+ +R L GKQ+H H+ G L+ +++ +Y C ++DA K+FDE NV
Sbjct: 118 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 177
Query: 124 VSWNIMIRG--VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
SWN ++RG ++G+ D +S F M V + + + + S +
Sbjct: 178 YSWNALLRGTVISGKKRYQD-----VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G++ H +K G F+ +LVD+Y KCG V ARR F + RD+V+ MI+ A
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 242 NCLPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR-QAFDSDV 299
N EA +F ++ + + +++L V ++ +GK H+ +L+ + +
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 300 LVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE 359
V S LI++Y K ++ R VF RN ++W ++ G G + L+ + M +E
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 360 GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA 419
GF PD +TI++ + +C AI + + H A+K F +S+ SL+ YSKCG
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 420 LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
++ F E+ ++ WT++I Y + E+F ML PD V+ VL+ C+
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 196/406 (48%), Gaps = 13/406 (3%)
Query: 155 LLEKVVP-DYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
L ++ +P + TF+ L+ +CV+ ++ G Q+H + G + + F+ LV +Y CG
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 214 VENARRAFCAVPCRDLVMCNVMISCYALNCLP--EEAFSMFNLLRMDGANGDEFTFSSLL 271
V++A++ F ++ N ++ ++ ++ S F +R G + + ++ S++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 272 SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV 331
G H+L ++ + V + ++L++MY K + AR VFDE++ R++V
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHAI 390
W +I G + E L L R M+ E P+ + +++ + + G A+ + HA
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 391 AVK-LSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
+K ++ E V + LI Y KCG++ S + F +++ + ++WT+L+ YA +G+ ++
Sbjct: 342 VLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTC 507
A M G PD V+ VL CA + +G +H + L +P+ T
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN---LFLPNVSLVTS 458
Query: 508 LVDLLGRYGLID---EAFELLRSMPVEVESDTLGAFIGSCKLHANI 550
L+ + + G+ + F+ L V+ + + ++ +C L A I
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF 295
I +A E A ++ + L G + TFS+LL C + GK H I
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN-----TIIVGCGNYGDGSEVL 350
+S+ + + L++MY ++ DA+ VFDE NV +WN T+I G Y D VL
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQD---VL 199
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+M G + ++S+ ASA+ + L+THA+A+K + + SL+ Y
Sbjct: 200 STFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY 259
Query: 411 SKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
KCG + A + F E D+V W ++I A + + +A +F M+S
Sbjct: 260 FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/574 (26%), Positives = 270/574 (47%), Gaps = 40/574 (6%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
K +HA L++ GF N+ L +Y K + +A +LFD++P +N ++WN+ ++G+
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV-------------- 181
N++ + F M VV +GL+ SC FH G+
Sbjct: 83 NGYLNNA-----LDLFDEMPERDVVSWNTMISGLV-SC-GFHEYGIRVFFDMQRWEIRPT 135
Query: 182 ----------------GIQLHCYTVKVGFD-LDCFVGCALVDLYAKCGLVENARRAFCAV 224
G Q+H + G + V +++D+Y + G+ + A F +
Sbjct: 136 EFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTM 195
Query: 225 PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGK 284
RD+V N +I + + E A F L+R DE+T S ++S+C L GK
Sbjct: 196 EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 285 LAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYG 344
A +L ++ F S+ +V A I+M++K + D+ +F E+ + V N++I +
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC 315
Query: 345 DGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
G + L+L + + PD+ T SS +S A + H++ +KL F +VA
Sbjct: 316 CGEDALRLFILAMTQSVRPDKFTFSSVLSSMN-AVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 405 SLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML-SCGVV 463
SL+ Y K G++ A+ F T+ DL+ W ++I A + +A ++ +F ++L + +
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
PDRV+ +G+L AC + G V +G+ F+ M + + P ++HY C+++LL R G+I+EA +
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 524 LLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRD 583
+ +P E S + + + LAE A+ + EP+ S Y + IY
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 584 WCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
W + R + + G S I + + V SF
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
PD F +++ S L G +H+ +IK GF ++ ++ +Y K ++ A
Sbjct: 334 PDK---FTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLL-EKVVPDYVTFNGLIG 171
+F + G++++ WN +I G+A +S A ++ F ++L+ + + PD VT G++
Sbjct: 391 GVFAKTDGKDLIFWNTVIMGLA-----RNSRAVESLAIFNQLLMNQSLKPDRVTLMGILV 445
Query: 172 SCVQFHNIGVGIQLHCYTVKV-GFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
+C + GIQ+ K G + +++L + G++ A+ +P
Sbjct: 446 ACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 239/481 (49%), Gaps = 19/481 (3%)
Query: 164 VTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA--KCGLVENARRAF 221
V +I CV F I QL + + G F+ L++ A G + A + F
Sbjct: 4 VYMETMIQKCVSFSQIK---QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIF 60
Query: 222 CAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG------DEFTFSSLLSVCD 275
+P N +I +A + P AFS + + ++ D T S L C
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT 335
H I R+ +D L+ + L++ Y+KN ++ A +FDEM +R+V +WN
Sbjct: 121 RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNA 180
Query: 336 IIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAIAVKL 394
+I G + SE ++L + M EG E+T+ + + C + + E H +
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS--- 237
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAEKATEM 453
+ + V+N+ I YSKCG + A + F + T + +VTW ++I +A HG+A +A E+
Sbjct: 238 --NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
F+K+ G+ PD VS+L L+AC H GLV GL FN M + + + HY C+VDLL
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLS 354
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAA 573
R G + EA +++ SM + + + +G+ ++++++ +AE A+ ++ + ++
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVL 414
Query: 574 MSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEMYAT 633
+SN+YA+Q W DV R + K K+PG S+IE +H F + DK+H + E+Y
Sbjct: 415 LSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEK 474
Query: 634 L 634
+
Sbjct: 475 I 475
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 174/404 (43%), Gaps = 29/404 (7%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCK-----EIEDADKLFDELPGRNVVSWNIMIR 131
KQL +H + G L++++L +C ++ A ++F +P WN +IR
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIR 76
Query: 132 GVAGRDNENDSSAP-LCVSYFKRMLLEKVVP------DYVTFNGLIGSCVQFHNIGVGIQ 184
G AG SS P L S+++ ML + D +T + + +C + Q
Sbjct: 77 GFAG------SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
LHC + G D + L+D Y+K G + +A + F +P RD+ N +I+
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD-VLVAS 303
EA ++ + +G E T + L C L G + + + +D V+V++
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHL-----GDVKEGENIFHGYSNDNVIVSN 245
Query: 304 ALINMYAKNENITDARGVFDEML-IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
A I+MY+K + A VF++ ++VV WNT+I G +G+ L++ + G
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
PD+++ + ++ C +A + L + + ++ S+ G + A
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 423 F-RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
++ PD V W SL+ A + E A ++ GV D
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNND 409
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 58 LFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDE 117
L C+ LK A+ QLH + + G L +L Y K ++ A KLFDE
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 118 LPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFH 177
+P R+V SWN +I G+ + + A + +KRM E + VT +G+C
Sbjct: 170 MPVRDVASWNALIAGLV-----SGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 178 NIGVGIQL-HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC-RDLVMCNVM 235
++ G + H Y+ + + V A +D+Y+KCG V+ A + F + +V N M
Sbjct: 225 DVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF 295
I+ +A++ A +F+ L +G D+ ++ + L+ C + G + + +
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEM-LIRNVVAWNTIIVGCGNYGD 345
+ ++ ++++ ++ + +A + M +I + V W +++ Y D
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSD 390
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/591 (26%), Positives = 268/591 (45%), Gaps = 65/591 (10%)
Query: 38 LRASVSVPDQTLFRDPDT---VHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSL 94
LRA+V + + PD VHL L+VS ++ +QLH ++ K GF L
Sbjct: 40 LRAAVELINDG--EKPDASPLVHL-----LRVSGNYGYVSLCRQLHGYVTKHGFVSNTRL 92
Query: 95 QNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGV--AGRDNENDSSAPLCVSYFK 152
N ++ Y +EDA K+FDE+P +V+SWN ++ G +GR E +C+ F
Sbjct: 93 SNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG-----ICL--FL 145
Query: 153 RMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL-DCFVGCALVDLYAKC 211
+ V P+ +F + +C + H +G +H VK+G + + VG L+D+Y KC
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
G +++A F + +D V N +++ + N
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRN----------------------------- 236
Query: 272 SVCDTLEYYDIGKLAHSL-ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV 330
GKL L Q + D + + LI+ + K+ + +A V +M N
Sbjct: 237 -----------GKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
+WNTI+ G N E + M G DE ++S ++ + + HA
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
A KL + VA++LI YSKCG + A F +L+ W +I YA +G + +A
Sbjct: 346 AHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEA 405
Query: 451 TEMFEKMLSCGVV-PDRVSFLGVLSACAHCGLVTK-GLHYFNLMTSVYQIVPDSDHYTCL 508
++F ++ + PDR +FL +L+ C+HC + + L YF +M + Y+I P +H L
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSL 465
Query: 509 VDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFII--EPE 566
+ +G+ G + +A ++++ + A +G+C ++ A+ A K+ + +
Sbjct: 466 IRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADK 525
Query: 567 KSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
Y MSN+YA W +V RK++ + G K G SWI+ + S+
Sbjct: 526 DEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
+W+TI+ +G VL+ +++ +G PD + + + G ++ Q H
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
K F ++NSL+ Y ++ A K F +PD+++W SL+ Y G+ ++
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACA-----------HCGLVTKGLHYFNLMTSVYQIVP 500
+F ++ V P+ SF L+ACA H LV GL N++
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG------ 195
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEW 555
CL+D+ G+ G +D+A + + M E ++ + A + SC + + L W
Sbjct: 196 -----NCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLW 244
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 223/459 (48%), Gaps = 37/459 (8%)
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYA 240
+G LH ++K G D VG +L+ +Y KCG V +AR+ F +P R++ N MI Y
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 241 LNCLPEEAFSMF----------NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
N A +F + M G + + + + A S++
Sbjct: 124 SNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVM 183
Query: 291 L------------RQAF----DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWN 334
L R+ F + + V S +++ Y + ++ +AR +F + R++V WN
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
T+I G G + + +M EG+ PD +T+SS +S C + + + H++
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMF 454
+ V+N+LI Y+KCG++ +A F + S+I A HG+ ++A EMF
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 455 EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGR 514
M S + PD ++F+ VL+AC H G + +GL F+ M + + P+ H+ CL+ LLGR
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGR 422
Query: 515 YGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV----- 569
G + EA+ L++ M V+ LGA +G+CK+H + +AE + + IIE S+
Sbjct: 423 SGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE---QVMKIIETAGSITNSYS 479
Query: 570 --NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
+ A++SN+YA W E+ R + +G K PG S
Sbjct: 480 ENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 196/419 (46%), Gaps = 30/419 (7%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
GK LH+ IKFG C + + + ++S+Y KC + A K+FDE+P RNV +WN MI G
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 136 RDNENDSSA---------------PLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
+ +S + Y KR+ +EK + + + V+ ++
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN-VKAWSVM 183
Query: 181 VGIQLHCYTVKVGFDL-------DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN 233
+G+ ++ ++ + FV ++ Y + G V AR F V RDLV+ N
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 234 VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ 293
+I+ YA N ++A F ++ +G D T SS+LS C D+G+ HSLI +
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 294 AFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLL 353
+ + V++ALI+MYAK ++ +A VF+ + +R+V N++I +G G E L++
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 354 RDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKC 413
M PDE+T + ++ C + + E L+ + + + LI +
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRS 423
Query: 414 GNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
G + A +RL +E P+ +L+ A H E A ++ + + + G + + S
Sbjct: 424 GKLKEA---YRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYS 479
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 164/608 (26%), Positives = 275/608 (45%), Gaps = 81/608 (13%)
Query: 54 DTVHLFCANALKVSAKRAFLPEGKQL---HAHLIKFGFCHVLSLQNQILSVYLKCKEIED 110
D+ C + L + AK L + + + HA L F N ++ Y++ + + D
Sbjct: 73 DSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASF-------NIMVDGYVRSRRLWD 125
Query: 111 ADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI 170
A KLFD +P R+ VS+ +I+G A + +++ + F+ M ++ + VT +I
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA-----MELFREMRNLGIMLNEVTLATVI 180
Query: 171 GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLV 230
+C I L +K+ + FV L+ +Y C +++AR+ F +P R+LV
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 231 MCNVMISCYALNCLPEEAFSMFNLL-------------------RMD------------G 259
NVM++ Y+ L E+A +F+ + ++D G
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG 300
Query: 260 ANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD----------------SDVLVA- 302
E LLS G H I+++ FD +D+ +A
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 303 --------------SALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSE 348
+ALI + KN + AR VFD+ +++ +WN +I G
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 349 VLKLLRDMLREG-FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLI 407
L L R+M+ PD +T+ S S ++ E + H + ++ ++I
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAII 480
Query: 408 SAYSKCGNITSALKCFRLTEEPDLVT---WTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
Y+KCG+I +AL F T+ T W ++I A HG A+ A +++ + S + P
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
+ ++F+GVLSAC H GLV G YF M S + I PD HY C+VDLLG+ G ++EA E+
Sbjct: 541 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEM 600
Query: 525 LRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDW 584
++ MPV+ + G + + + H N+ +AE AA +L I+P +SN+YA W
Sbjct: 601 IKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRW 660
Query: 585 CDVESARK 592
DV R+
Sbjct: 661 EDVALVRE 668
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 198/482 (41%), Gaps = 101/482 (20%)
Query: 170 IGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENAR----------- 218
+GSC +++ G Q+HC +K G D + ++ +++++YAKC L+ +A
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 219 --------------------RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMD 258
+ F +P R V +I YA N EA +F +R
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
G +E T ++++S C L ++ SL ++ + V V++ L++MY + DA
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 319 RGVFDEMLIRNVVAWN-------------------------------TIIVGCGNYGDGS 347
R +FDEM RN+V WN T+I GC
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 348 EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAV--------------- 392
E L +MLR G P E+ + +S + ++ LQ H V
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 393 ---------KLSFQEF-------LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
KL+ Q+F ++ N+LI+ + K G + A + F T + D+ +W +
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVV-PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
+I YA + A +F +M+S V PD ++ + V SA + G + +G + +
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN-- 465
Query: 496 YQIVPDSDHYT-CLVDLLGRYGLIDEAFELLRSMPVEVESDTL---GAFIGSCKLHANIG 551
+ +P +D+ T ++D+ + G I+ A + + S T+ A I H +
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTK-NISSSTISPWNAIICGSATHGHAK 524
Query: 552 LA 553
LA
Sbjct: 525 LA 526
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 194/472 (41%), Gaps = 64/472 (13%)
Query: 21 VAQCFSNSSHQPHPWS-RLRASVSVP---DQTLFRDPDTVHLFCANALKVSAKRAF--LP 74
+A S SH W R+ S+++ + +F + +H++C A++ F +P
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVA 134
E L N +L+ Y K IE A++LFD++ +++VSW MI G
Sbjct: 236 ERN--------------LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
R N+ D + + Y+ ML + P V L+ + + G+QLH VK GF
Sbjct: 282 -RKNQLDEA----LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
Query: 195 DLDCFVGCALVDLYA-------------------------------KCGLVENARRAFCA 223
D F+ ++ YA K G+VE AR F
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 224 VPCRDLVMCNVMISCYALNCLPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
+D+ N MIS YA + P+ A +F ++ D T S+ S +L +
Sbjct: 397 THDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE 456
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE---MLIRNVVAWNTIIVG 339
GK AH + + + +A+I+MYAK +I A +F + + + WN II G
Sbjct: 457 GKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICG 516
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL--SFQ 397
+G L L D+ P+ +T +S C +A + E +T+ ++K +
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHA-GLVELGKTYFESMKSDHGIE 575
Query: 398 EFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAE 448
+ ++ K G + A + ++ + D++ W L+ A HG E
Sbjct: 576 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 62/286 (21%)
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV-- 321
E S L C + G+ H +L+ DS+ + ++++NMYAK + DA V
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 322 -----------------------------FDEMLIRNVVAWNTIIVGCGNYGDGSEVLKL 352
FD M R+ V++ T+I G SE ++L
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
R+M G +E+T+++ IS C + I + ++A+KL + + V+ +L+ Y
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 413 CGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK---------------- 456
C + A K F E +LVTW +++ Y+ G E+A E+F++
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGC 280
Query: 457 ---------------MLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
ML CG+ P V + +LSA A +KGL
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ 326
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 215/414 (51%), Gaps = 6/414 (1%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L + ++RA G+Q+H +++K G +++ +++ ++ Y +C E+ A + FD + ++V
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 124 VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI 183
+SW +I + + + + F ML +P+ T ++ +C + + G
Sbjct: 250 ISWTAVISACSRKGH-----GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR 304
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
Q+H VK D FVG +L+D+YAKCG + + R+ F + R+ V +I+ +A
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
EEA S+F +++ + T S+L C ++ +GK H+ I++ + + +V + S
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 304 ALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
L+ +Y K DA V ++ R+VV+W +I GC + G SE L L++M++EG P
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
+ T SS + C + ++ H+IA K + V ++LI Y+KCG ++ A + F
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
E +LV+W ++I YA +G +A ++ +M + G D F +LS C
Sbjct: 545 DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 220/461 (47%), Gaps = 22/461 (4%)
Query: 77 KQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGR 136
K++HA +K V+ N ++S ++ ++ A K+FD +P +N V+W MI G
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNG------LIGSCVQFHNIGVGIQLHCYTV 190
E+++ A L E V + F L+ C + +G Q+H V
Sbjct: 162 GLEDEAFA----------LFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
KVG + V +LV YA+CG + +A RAF + +D++ +IS + +A
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG 270
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
MF + +EFT S+L C + G+ HSL++++ +DV V ++L++MYA
Sbjct: 271 MFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K I+D R VFD M RN V W +II G G E + L R M R + LT+ S
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS 390
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
+ CG A+ + HA +K S ++ + + ++L+ Y KCG A + D
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--LVTKGLHY 488
+V+WT++I + G +A + ++M+ GV P+ ++ L ACA+ L+ + +H
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS 510
Query: 489 FNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMP 529
+ + + + L+ + + G + EAF + SMP
Sbjct: 511 ---IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 48 TLFRDPDTVHLFCANALKVSAKRA-----FLPEGKQLHAHLIKFGFCHVLSLQNQILSVY 102
+LFR HL N VS RA L GK+LHA +IK + + + ++ +Y
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Query: 103 LKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPD 162
KC E DA + +LP R+VVSW MI G + +E+++ + + K M+ E V P+
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA-----LDFLKEMIQEGVEPN 485
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
T++ + +C ++ +G +H K + FVG AL+ +YAKCG V A R F
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
++P ++LV MI YA N EA + + +G D++ F+++LS C +E
Sbjct: 546 SMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 186/361 (51%), Gaps = 21/361 (5%)
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS----DVLVASALINMYAKNEN 314
G D FT ++L+ V Y I + +L Q FD DV+ + LI+ K
Sbjct: 147 GLLSDLFTLNTLIRV-----YSLIAPIDSAL---QLFDENPQRDVVTYNVLIDGLVKARE 198
Query: 315 ITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
I AR +FD M +R++V+WN++I G E +KL +M+ G PD + I ST+S
Sbjct: 199 IVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSA 258
Query: 375 CGYAS--AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
C + + + + +L FL A L+ Y+KCG I +A++ F L + L
Sbjct: 259 CAQSGDWQKGKAIHDYTKRKRLFIDSFL--ATGLVDFYAKCGFIDTAMEIFELCSDKTLF 316
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
TW ++I A HG E + F KM+S G+ PD V+F+ VL C+H GLV + + F+ M
Sbjct: 317 TWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD----TLGAFIGSCKLHA 548
S+Y + + HY C+ DLLGR GLI+EA E++ MP + + +G C++H
Sbjct: 377 RSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Query: 549 NIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIG-DKGDAKVPGCSW 607
NI +AE AA ++ + PE Y M +YA+ W +V R++I DK K G S
Sbjct: 437 NIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSK 496
Query: 608 I 608
+
Sbjct: 497 V 497
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 33/267 (12%)
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGI--QLHCYTVKVGFDLDCFVGCALVDL 207
+F M V PD+ TF + +C N + + LHC ++ G D F L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 208 YAKC--------------------------GLVE-----NARRAFCAVPCRDLVMCNVMI 236
Y+ GLV+ AR F ++P RDLV N +I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 237 SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFD 296
S YA EA +F+ + G D S LS C + GK H R+
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
D +A+ L++ YAK I A +F+ + + WN +I G +G+G + R M
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 357 LREGFSPDELTISSTISLCGYASAITE 383
+ G PD +T S + C ++ + E
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDE 368
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 143/356 (40%), Gaps = 50/356 (14%)
Query: 30 HQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKR-AFLPEGKQLHAHLIKFGF 88
H+P S R V + +++ P H F +AK+ L K LH ++FG
Sbjct: 92 HEPSSLSSKRFFVEMRRRSV---PPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGL 148
Query: 89 CHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG-----RDNENDSS 143
L N ++ VY I+ A +LFDE P R+VV++N++I G+ R E S
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 144 APL---------------------CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
PL + F M+ + PD V + +C Q + G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
+H YT + +D F+ LVD YAKCG ++ A F + L N MI+ A++
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 243 CLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI--LRQAFD---- 296
E F + G D TF S+L C D A +L +R +D
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD---EARNLFDQMRSLYDVNRE 385
Query: 297 -------SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD 345
+D+L + LI A+ G E L+ AW+ ++ GC +G+
Sbjct: 386 MKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL----AWSGLLGGCRIHGN 437
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 131/332 (39%), Gaps = 59/332 (17%)
Query: 268 SSLLSVCDTL--------EYYDIGKLAHSLILRQAFDSDVLVASALIN--MYAKNENITD 317
S LL +C TL ++ G++++ F ++VL A I+ A E ++
Sbjct: 8 SYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVF-ANVLFAITSISPSASASKEVVSY 66
Query: 318 ARGVFDEMLIRNVVAWNTIIVGCGNYGDGS-EVLKLLRDMLREGFSPDELTISSTISLCG 376
A VF + + +NTII C + S + +M R PD T C
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 377 YASAITETL--QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT- 433
TL H A++ L N+LI YS I SAL+ F + D+VT
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 434 ------------------------------WTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
W SLI YA +A ++F++M++ G+
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 464 PDRVSFLGVLSACAHCGLVTKG--LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
PD V+ + LSACA G KG +H + T ++ DS T LVD + G ID A
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDY---TKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 522 FELLRSMPVEVESD----TLGAFIGSCKLHAN 549
E+ E+ SD T A I +H N
Sbjct: 304 MEIF-----ELCSDKTLFTWNAMITGLAMHGN 330
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 212/429 (49%), Gaps = 51/429 (11%)
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLR----MDGANG-----DEFTFSSLLSVCDTLEY 279
L + N ++ CY+L P A+ +++ L+ + N D FT+ LL +
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 280 --YDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTII 337
+G H L L+ F+S V V +AL+ MY N+ DA VFDEM RN V WN +I
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 338 VGCGNYGDGSEVLKLLRDM----------LREGFS----------------------PDE 365
G N GD + L L M + +G++ P+E
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQE-FLSVANSLISAYSKCGNITSALKCFR 424
+TI + + + HA K F + V NSLI AY+KCG I SA K F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF- 315
Query: 425 LTEEPD----LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
E P+ LV+WT++I A+A HG ++A MF+ M G+ P+RV+ + VL+AC+H G
Sbjct: 316 -IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
Query: 481 LVTKG-LHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGA 539
L + L +FN M + Y+I PD HY CLVD+L R G ++EA ++ +P+E ++
Sbjct: 375 LAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRM 434
Query: 540 FIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGD 599
+G+C ++ + LAE KL +E +Y MSNI+ + D + RK + +G
Sbjct: 435 LLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGV 494
Query: 600 AKVPGCSWI 608
AK+PG S +
Sbjct: 495 AKLPGHSQV 503
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 39/309 (12%)
Query: 85 KFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSA 144
K GF + +Q ++ +YL + DA K+FDE+P RN V+WN+MI G+ N D
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLT---NLGDFEK 207
Query: 145 PLC----------VSY-------------------FKRMLL-EKVVPDYVTFNGLIGSCV 174
LC VS+ F RM+ + + P+ +T ++ +
Sbjct: 208 ALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVW 267
Query: 175 QFHNIGVGIQLHCYTVKVGF-DLDCFVGCALVDLYAKCGLVENARRAFCAVPC--RDLVM 231
++ + +H Y K GF D V +L+D YAKCG +++A + F +P ++LV
Sbjct: 268 NLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 327
Query: 232 CNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCD--TLEYYDIGKLAHSL 289
MIS +A++ + +EA SMF + G + T S+L+ C L + + +++
Sbjct: 328 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLI-RNVVAWNTIIVGCGNYGDGSE 348
+ DV L++M + + +A + E+ I V W ++ C Y D
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 349 VLKLLRDML 357
++ R ++
Sbjct: 448 AERVTRKLM 456
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 66/320 (20%)
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMIS------------- 237
K+GF+ +V ALV +Y G + +A + F +P R+ V NVMI+
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 238 ------------------CYALNCLPEEAFSMFN-LLRMDGANGDEFTFSSLLSVCDTLE 278
YA P+EA +F+ ++ D +E T ++L L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 279 YYDIGKLAHSLILRQAF-DSDVLVASALINMYAKNENITDARGVFDEML--IRNVVAWNT 335
+ H+ + ++ F D+ V ++LI+ YAK I A F E+ +N+V+W T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 336 IIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLS 395
+I +G G E + + +DM R G P+ +T+ S ++ C + L+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG--------------LA 376
Query: 396 FQEFLSVANSLISAYS----------------KCGNITSALK-CFRLTEEPDLVTWTSLI 438
+EFL N++++ Y + G + A K + E V W L+
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 439 HAYAFHGQAEKATEMFEKML 458
A + + AE A + K++
Sbjct: 437 GACSVYDDAELAERVTRKLM 456
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 190/357 (53%), Gaps = 12/357 (3%)
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCG 341
G+ H+L+ + F++ + + ++L+ Y+ ++ AR VFDE + N+V W +I
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 342 NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT--ETLQTHAIAVKLSFQEF 399
+ E ++L + M E D + ++ +S C A+ E + + +I K
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
L++ NSL++ Y K G A K F + D+ T+TS+I YA +GQA+++ E+F+KM +
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 460 CG------VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
+ P+ V+F+GVL AC+H GLV +G +F M Y + P H+ C+VDL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAA 573
R G + +A E + MP++ + +G+C LH N+ L E ++F ++ + +Y A
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 574 MSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPKALEM 630
+SNIYAS+ W + R + + ++PG SWIE+ + ++ FVS + + L M
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQLMM 437
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 182/385 (47%), Gaps = 31/385 (8%)
Query: 63 ALKVS-AKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR 121
A+KVS A++A +G+Q+HA + K GF V+ +Q ++ Y +++ A ++FDE P +
Sbjct: 70 AIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK 129
Query: 122 -NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
N+V W MI A +NEN A + FKRM EK+ D V + +C +
Sbjct: 130 QNIVLWTAMIS--AYTENENSVEA---IELFKRMEAEKIELDGVIVTVALSACADLGAVQ 184
Query: 181 VGIQLHCYTVKVGFDL--DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISC 238
+G +++ ++K L D + +L+++Y K G E AR+ F +D+ MI
Sbjct: 185 MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFG 244
Query: 239 YALNCLPEEAFSMFNLLRMDGANGD------EFTFSSLLSVCDTLEYYDIGKLA-HSLIL 291
YALN +E+ +F ++ + D + TF +L C + GK S+I+
Sbjct: 245 YALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM 304
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD---GS 347
+++++ ++ ++ DA ++M I+ N V W T++ C +G+ G
Sbjct: 305 DYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGE 364
Query: 348 EVLKLLRDMLREGFSPDELTISSTISLCGY---ASAITETLQTHAIAVKLSFQEFLSVAN 404
EV + + ++ R+ D + +S+ + G S + + ++ + K S+ E S+ N
Sbjct: 365 EVQRRIFELDRDHVG-DYVALSNIYASKGMWDEKSKMRDRVRKRRMPGK-SWIELGSIIN 422
Query: 405 SLISAYSK------CGNITSALKCF 423
+S G I+ L+C
Sbjct: 423 EFVSGPDNNDEQLMMGEISEVLRCL 447
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 174/321 (54%), Gaps = 4/321 (1%)
Query: 318 ARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR-EGFSPDELTISSTISLCG 376
A+ V +NV+ WN +I G E LK L++ML P++ + +S+++ C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
+ H++ + + ++++L+ Y+KCG+I ++ + F + D+ W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I +A HG A +A +F +M + V PD ++FLG+L+ C+HCGL+ +G YF LM+ +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
I P +HY +VDLLGR G + EA+EL+ SMP+E + + + S + + N L E A
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHS 616
+ L KS +Y +SNIY+S + W + R+++ +G K G SW+E +H
Sbjct: 357 IQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHR 413
Query: 617 FVSRDKTHPKALEMYATLKML 637
F + D +H + +Y L+ L
Sbjct: 414 FKAGDTSHIETKAIYKVLEGL 434
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 3/248 (1%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF-SMFNLLRMDGANG 262
+++ K G A++ ++++ N+MI Y N EEA ++ N+L
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 263 DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVF 322
++F+F+S L+ C L K HSL++ + + +++SAL+++YAK +I +R VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
+ +V WN +I G +G +E +++ +M E SPD +T ++ C + +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 383 ETLQTHAI-AVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHA 440
E + + + + S Q L +++ + G + A + + EPD+V W SL+ +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 441 YAFHGQAE 448
+ E
Sbjct: 344 SRTYKNPE 351
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 87 GFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPL 146
G C++ N I+ +K E A K+ +NV++WN+MI G R+ + + +
Sbjct: 97 GVCNI----NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYV-RNVQYEEA--- 148
Query: 147 CVSYFKRML-LEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALV 205
+ K ML + P+ +F + +C + ++ +H + G +L+ + ALV
Sbjct: 149 -LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 206 DLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF 265
D+YAKCG + +R F +V D+ + N MI+ +A + L EA +F+ + + + D
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSI 267
Query: 266 TFSSLLSVCDTLEYYDIGKLAHSLILRQ-AFDSDVLVASALINMYAKNENITDARGVFDE 324
TF LL+ C + GK L+ R+ + + A++++ + + +A + +
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 325 MLIR-NVVAWNTIIVGCGNYGD 345
M I +VV W +++ Y +
Sbjct: 328 MPIEPDVVIWRSLLSSSRTYKN 349
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 50 FRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIE 109
F D A++L A+ L K +H+ +I G L + ++ VY KC +I
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 110 DADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGL 169
+ ++F + +V WN MI G A A + F M E V PD +TF GL
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFA-----THGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 170 IGSCVQFHNIGVGIQ---LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC 226
+ +C + G + L + L+ + A+VDL + G V+ A ++P
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAYELIESMPI 330
Query: 227 R-DLVMCNVMISCYALNCLPE 246
D+V+ ++S PE
Sbjct: 331 EPDVVIWRSLLSSSRTYKNPE 351
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 199/420 (47%), Gaps = 36/420 (8%)
Query: 233 NVMISCYALNCLPEEAFSM-FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL 291
N + Y ++ P++A F++LR G D +TF SL+S + D GK+ H +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRF-GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 292 RQAFDSDVLVASALINMYA-------------------------------KNENITDARG 320
+ D + V ++L++MY +N ++ A
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 321 VFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA 380
+FDEM +N+++WN +I + + L R+M+R GF +E T+ ++ CG ++
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 381 ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHA 440
+ E HA ++ + + +LI Y KC + A + F + VTW +I A
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
+ HG+ E E+FE M++ + PD V+F+GVL CA GLV++G Y++LM +QI P
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMP---VEVESDTLGAFIGSCKLHANIGLAEWAA 557
+ H C+ +L G +EA E L+++P V ES + S + N L E A
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 558 EKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVANQVHSF 617
+ L +P Y + NIY+ W DV R+M+ ++ ++PGC +++ VH
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGL 505
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 44/345 (12%)
Query: 142 SSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG 201
SS + ++ +L VPD TF LI + + G H +K G D V
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 202 CALVDLYAKCGLVENARRAFCAVPCRDLVMCN---------------------------- 233
+L+ +Y CG ++ A++ F +P RD+V N
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 234 ---VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLI 290
+MIS Y P + S+F + G G+E T LL+ C G+ H+ +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 291 LRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVL 350
+R +S V++ +ALI+MY K + + AR +FD + IRN V WN +I+ +G L
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITE-----TLQTHAIAVKLSFQEFLSVANS 405
+L M+ PDE+T + C A +++ +L +K +F +AN
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN- 395
Query: 406 LISAYSKCGNITSALKCFR-LTEE---PDLVTWTSLIHAYAFHGQ 446
YS G A + + L +E P+ W +L+ + F G
Sbjct: 396 ---LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 28/245 (11%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
GK H IK G VL +QN ++ +Y C ++ A KLF E+P R++VSWN +I G+
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMV- 195
Query: 136 RDNE---------------------------NDSSAPLCVSYFKRMLLEKVVPDYVTFNG 168
R+ + ++ + +S F+ M+ + T
Sbjct: 196 RNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVL 255
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
L+ +C + + G +H ++ + + AL+D+Y KC V ARR F ++ R+
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHS 288
V NVMI + L+ PE +F + DE TF +L C G+ +S
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 289 LILRQ 293
L++ +
Sbjct: 376 LMVDE 380
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 64 LKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNV 123
L + A L EG+ +HA LI+ + + ++ +Y KCKE+ A ++FD L RN
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 124 VSWNIMIRG--VAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
V+WN+MI + GR + F+ M+ + PD VTF G++ C + +
Sbjct: 317 VTWNVMILAHCLHGRPEGG-------LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQ 369
Query: 182 GIQLHCYTVKVGFDLDCFVG--CALVDLYAKCGLVENARRAFCAVPCRDLV 230
G + V F + G + +LY+ G E A A +P D+
Sbjct: 370 GQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/580 (25%), Positives = 255/580 (43%), Gaps = 64/580 (11%)
Query: 73 LPEGKQLHAHLIKFGFCH---VLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIM 129
L + KQ+HA L+ + H +L Q + + ++ G + SW +
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCL 75
Query: 130 IRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYT 189
+R ++ ++ V + M + P ++ +C + N+ G +H
Sbjct: 76 VRFLSQHRKFKET-----VDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 190 VKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAF 249
+K G +V LV LY++ G +E A++AF + ++ V N ++ Y + +EA
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 250 SMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA-SALINM 308
+F+ + D +++ ++S Y G + ++ L A + + LI
Sbjct: 191 RVFDKI----PEKDAVSWNLIIS-----SYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 309 YAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGD----------------------- 345
Y + AR FD M +N V+W T+I G GD
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 346 --------GSEVLKLLRDMLREG--FSPDELTISSTISL------CGYASAITETLQTHA 389
+ LKL ML PDE+T+SS +S + + + + H
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 390 IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEK 449
I + + LS SLI Y K G+ A K F + D V+++++I +G A +
Sbjct: 362 IKI----DDLLST--SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
A +F M+ + P+ V+F G+LSA +H GLV +G FN M + + P +DHY +V
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMV 474
Query: 510 DLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
D+LGR G ++EA+EL++SMP++ + GA + + LH N+ E A +E + +
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTG 534
Query: 570 NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIE 609
+ ++ IY+S W D + R I +K K GCSW+E
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 42/427 (9%)
Query: 53 PDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDAD 112
P + H + L+ K + +GK +HA +K G C + +Q ++ +Y + IE A
Sbjct: 101 PPSSHAVTS-VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAK 159
Query: 113 KLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVV-PDYVTFNGLIG 171
K FD++ +N VSWN ++ G E D + R + +K+ D V++N +I
Sbjct: 160 KAFDDIAEKNTVSWNSLLHGYL-ESGELDEA---------RRVFDKIPEKDAVSWNLIIS 209
Query: 172 S----------CVQFH----------NIGVGIQLHCYTVKVG---FDL----DCFVGCAL 204
S C F NI +G ++C +K+ FD + +
Sbjct: 210 SYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITM 269
Query: 205 VDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN--LLRMDGANG 262
+ Y K G V++A F + +D ++ + MI+CY N P++A +F L R
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 263 DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVF 322
DE T SS++S L G S I D L++++LI++Y K + A +F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
+ ++ V+++ +I+GCG G +E L M+ + P+ +T + +S ++ +
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPDLVTWTSLIHAY 441
E + + + ++ + G + A + + + +P+ W +L+ A
Sbjct: 450 EGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLAS 509
Query: 442 AFHGQAE 448
H E
Sbjct: 510 GLHNNVE 516
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 192/410 (46%), Gaps = 36/410 (8%)
Query: 233 NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILR 292
N +I Y + + ++F + + TF SL+ + G H L+
Sbjct: 55 NTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALK 114
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEML-------------------------- 326
+ F D V ++ + Y + ++ +R +FD++L
Sbjct: 115 RGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEY 174
Query: 327 -----IRNVVAWNTIIVGCGNYGDGSEVLKLLRDML---REGFSPDELTISSTISLCGY- 377
+ +VV+W T+I G G ++ L + +M+ R +P+E T S +S C
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 378 -ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTS 436
I Q H + ++ +L+ Y K G++ AL F + + W +
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 437 LIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVY 496
+I A A +G+ ++A EMFE M S V P+ ++ L +L+ACA LV G+ F+ + S Y
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEY 354
Query: 497 QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWA 556
+I+P S+HY C+VDL+GR GL+ +A ++S+P E ++ LGA +G+CK+H N L
Sbjct: 355 KIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTV 414
Query: 557 AEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCS 606
++L ++P+ Y A+S A +W + E RK + + G K+P S
Sbjct: 415 GKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
++ F ML V P+ +TF LI + ++ G+ LH +K GF D FV + V
Sbjct: 71 LALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRF 130
Query: 208 YAKCGLVENARRAF------CAVPCR-------------------------DLVMCNVMI 236
Y + G +E++R+ F C V C D+V +I
Sbjct: 131 YGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 237 SCYALNCLPEEAFSMFN-LLRMDGA--NGDEFTFSSLLSVCDTLEYYDI--GKLAHSLIL 291
+ ++ L +A +F +++ + A +E TF S+LS C + I GK H ++
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM 250
Query: 292 RQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLK 351
+ + +AL++MY K ++ A +FD++ + V AWN II + G + L+
Sbjct: 251 SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALE 310
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
+ M P+ +T+ + ++ C + + +Q
Sbjct: 311 MFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G LH +K GF +Q + Y + ++E + K+FD++ VV+ N ++ G
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDA-CG 163
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVV----------------------------------P 161
R+ E D + YF+RM + VV P
Sbjct: 164 RNGEMDYA----FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITP 219
Query: 162 DYVTFNGLIGSCVQFHNIGV--GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR 219
+ TF ++ SC F G+ G Q+H Y + L +G AL+D+Y K G +E A
Sbjct: 220 NEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALT 279
Query: 220 AFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEY 279
F + + + N +IS A N P++A MF +++ + + T ++L+ C +
Sbjct: 280 IFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKL 339
Query: 280 YDIG 283
D+G
Sbjct: 340 VDLG 343
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 173/345 (50%), Gaps = 19/345 (5%)
Query: 282 IGKLAHSLILRQAF--DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVG 339
+G++ H ++ + F +S+ L+ + L++ YAKN ++ AR VFDEM R V WN +I G
Sbjct: 129 VGRIVHGMVKKLGFLYESE-LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 340 -CGNYGDGSEVLKLLRDMLRE------GFSPDELTISSTISLCGYASAITETLQTHAIAV 392
C + G+ + + R G P + T+ +S + H
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 393 KLSFQEFLSV--ANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKA 450
KL F + V +L+ YSKCG + +A F L + ++ TWTS+ A +G+ +
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 451 TEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVD 510
+ +M G+ P+ ++F +LSA H GLV +G+ F M + + + P +HY C+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 511 LLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV- 569
LLG+ G I EA++ + +MP++ ++ L + +C ++ + E + L IE E
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 570 ------NYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWI 608
+Y A+SN+ A + W +VE RK + ++ PG S++
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 26/368 (7%)
Query: 7 FKKQLHFTPILYSFVAQCFSNSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKV 66
F + H L++ + +C +P R+ A+ + L+ + T +F A
Sbjct: 67 FPRFGHPDKFLFNTLLKC-----SKPEDSIRIFANYASKSSLLYLNERTF-VFVLGACAR 120
Query: 67 SAKRAFLPEGKQLHAHLIKFGFCHVLSL-QNQILSVYLKCKEIEDADKLFDELPGRNVVS 125
SA + L G+ +H + K GF + L +L Y K ++ A K+FDE+P R V+
Sbjct: 121 SASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVT 180
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLL--EKVVPDYVTFNGLIGSCVQFHNIGVGI 183
WN MI G ++ + +A + F+R V P T ++ + Q + +G
Sbjct: 181 WNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGS 240
Query: 184 QLHCYTVKVGF--DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
+H Y K+GF ++D F+G ALVD+Y+KCG + NA F + +++ M + AL
Sbjct: 241 LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL 300
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
N E ++ N + G +E TF+SLLS Y IG + + L ++ + V
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSA-----YRHIGLVEEGIELFKSMKTRFGV 355
Query: 302 ASA------LINMYAKNENITDARGVFDEMLIR-NVVAWNTIIVGCGNYGD---GSEVLK 351
++++ K I +A M I+ + + ++ C YG+ G E+ K
Sbjct: 356 TPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGK 415
Query: 352 LLRDMLRE 359
L ++ RE
Sbjct: 416 ALLEIERE 423
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 210/476 (44%), Gaps = 95/476 (19%)
Query: 76 GKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAG 135
G A + K GF ++N I+ +Y+K + +E A K+FD++ R WN+MI G
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWK 179
Query: 136 RDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFD 195
N+ ++ F M VV V G
Sbjct: 180 WGNKEEA-----CKLFDMMPENDVVSWTVMITG--------------------------- 207
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
+AK +ENAR+ F +P + +V N M+S YA N E+A +FN +
Sbjct: 208 ------------FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAK---- 311
G +E T+ ++S C + + LI + + V +AL++M+AK
Sbjct: 256 LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 312 -------NE---------------------NITDARGVFDEMLIRNVVAWNTIIVGCGNY 343
NE +++ AR +FD M RNVV+WN++I G +
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 375
Query: 344 GDGSEVLKLLRDMLREGFS-PDELTISSTISLCGYASA------ITETLQTHAIAVKLSF 396
G + ++ DM+ G S PDE+T+ S +S CG+ + I + ++ + I + S
Sbjct: 376 GQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG 435
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
SLI Y++ GN+ A + F +E D+V++ +L A+A +G + + K
Sbjct: 436 YR------SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
M G+ PDRV++ VL+AC GL+ +G F + + P +DHY C+ DLL
Sbjct: 490 MKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 209/491 (42%), Gaps = 85/491 (17%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSL-QNQILSVYLKCKEIEDADKL-FDELPGRNVVSWNIMI 130
P+ Q+HA LI F S ++I+S + + +L FD + NV N M
Sbjct: 19 FPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMF 78
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
+ + D ND + +++ ++PD +F +I S +F GI
Sbjct: 79 KYFSKMDMAND-----VLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVE 128
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
K+GF D +V ++D+Y K VE+AR+ F + R NVMIS Y EEA
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 251 MFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYA 310
+F+++ ++DV+ + +I +A
Sbjct: 189 LFDMMP---------------------------------------ENDVVSWTVMITGFA 209
Query: 311 KNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
K +++ +AR FD M ++VV+WN ++ G G + L+L DMLR G P+E T
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 371 TISLCGYAS----------------------AITETLQTHA----------IAVKLSFQE 398
IS C + + T L HA I +L Q
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 399 FLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
L N++IS Y++ G+++SA + F + ++V+W SLI YA +GQA A E FE M+
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 459 SCG-VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGL 517
G PD V+ + VLSAC H + G + + QI + Y L+ + R G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGN 448
Query: 518 IDEAFELLRSM 528
+ EA + M
Sbjct: 449 LWEAKRVFDEM 459
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 167/378 (44%), Gaps = 33/378 (8%)
Query: 184 QLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNC 243
Q+H +K D + L+ + + G + A F + N+MI ++N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 244 LPEEAFSMFNLLRMD-GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVA 302
P EA +F L+ + + D+FTF ++ C +G H L ++ F +DV
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 303 SALINMYAK-------------------------------NENITDARGVFDEMLIRNVV 331
+ L+++Y K N + A VF++M +RNVV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 332 AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIA 391
+W +I E +L R M + P+E TI + + +++ H A
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKAT 451
K F + +LI YSKCG++ A K F + + L TW S+I + HG E+A
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 452 EMF-EKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVD 510
+F E V PD ++F+GVLSACA+ G V GL YF M VY I P +H C++
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQ 397
Query: 511 LLGRYGLIDEAFELLRSM 528
LL + +++A L+ SM
Sbjct: 398 LLEQALEVEKASNLVESM 415
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 48/371 (12%)
Query: 50 FRDPDTVHLF--CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKE 107
FR P+ + C+N + KQ+H +IK + L Q++SV E
Sbjct: 18 FRSPEASYFLRTCSN----------FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGE 67
Query: 108 IEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFN 167
+ A +F++L + +WN+MIR ++ N + + M+ + D TF
Sbjct: 68 TQYASLVFNQLQSPSTFTWNLMIRSLS----VNHKPREALLLFILMMISHQSQFDKFTFP 123
Query: 168 GLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR 227
+I +C+ +I +G Q+H +K GF D F L+DLY KCG ++ R+ F +P R
Sbjct: 124 FVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR 183
Query: 228 DLV--------------------------MCNV-----MISCYALNCLPEEAFSMFNLLR 256
+V M NV MI+ Y N P+EAF +F ++
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+D +EFT +LL L +G+ H + F D + +ALI+MY+K ++
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 317 DARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG-FSPDELTISSTISLC 375
DAR VFD M +++ WN++I G +G G E L L +M E PD +T +S C
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 376 GYASAITETLQ 386
+ + L+
Sbjct: 364 ANTGNVKDGLR 374
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 45 PDQT--LFR-----DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQ 97
PD+ LFR D N L+ S + L G+ +H + K GF L
Sbjct: 232 PDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTA 291
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIR--GVAGRDNENDSSAPLCVSYFKRML 155
++ +Y KC ++DA K+FD + G+++ +WN MI GV G E +S F+ M
Sbjct: 292 LIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE-------ALSLFEEME 344
Query: 156 LEKVV-PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKV 192
E V PD +TF G++ +C N+ G++ ++V
Sbjct: 345 EEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 191/445 (42%), Gaps = 47/445 (10%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
++ ML VV ++ G G N+ G+Q + GF LD + +L+ +A
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ------EDGFSLDVYSYTSLISAFAN 220
Query: 211 CGLVENARRAFCAVP---CRD-LVMCNVMISCYALNCLP-EEAFSMFNLLRMDGANGDEF 265
G A F + C+ L+ NV+++ + P + S+ ++ DG D +
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 266 TFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM 325
T+++L++ C + + F D + +AL+++Y K+ +A V +EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 326 LIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI 381
++ ++V +N++I G E ++L M +G PD T ++ +S A +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE----EPDLVTWTSL 437
+ + + N+ I Y G T +K F PD+VTW +L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 438 IHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
+ + +G + + +F++M G VP+R +F ++SA + CG + + + M
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-G 519
Query: 498 IVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCK---------LHA 548
+ PD Y ++ L R G+ +++ ++L E+E G CK LHA
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVL----AEMED-------GRCKPNELTYCSLLHA 568
Query: 549 -----NIGLAEWAAEKLF--IIEPE 566
IGL AE+++ +IEP
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPR 593
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 174/398 (43%), Gaps = 23/398 (5%)
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
S ++M + + PD T+N LI C + Q+ GF D AL+D+
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 208 YAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
Y K + A + + +V N +IS YA + + +EA + N + G D
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS-----DVLVASALINMYAKNENITDA 318
FT+++LLS + GK+ ++ + + + ++ +A I MY T+
Sbjct: 384 VFTYTTLLS-----GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 319 RGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+FDE+ L ++V WNT++ G G SEV + ++M R GF P+ T ++ IS
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PD 430
+ + + + + LS N++++A ++ G + K E+ P+
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
+T+ SL+HAYA + + E++ S + P V ++ C+ C L+ + F+
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ PD +V + GR ++ +A +L M
Sbjct: 619 ELKE-RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 108/561 (19%), Positives = 218/561 (38%), Gaps = 67/561 (11%)
Query: 14 TPILYSFVAQCFSNSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFL 73
T I Y+ + F PW+++ + V + + D + N L KR L
Sbjct: 242 TLITYNVILNVFGKMGT---PWNKITSLV----EKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 74 -PEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVVSWNI 128
E Q+ + GF + N +L VY K ++A K+ +E+ ++V++N
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEK-VVPDYVTFNGLIGSCVQFHNIGVGIQLHC 187
+I A RD D + L K + EK PD T+ L+ + + + +
Sbjct: 355 LISAYA-RDGMLDEAMEL-----KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 188 YTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP----CRDLVMCNVMISCYALNC 243
G + A + +Y G + F + D+V N +++ + N
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 244 LPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSD----- 298
+ E +F ++ G + TF++L+S ++ + +L D
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 299 -VLVASALINMYAKNENI----TDAR-----------------------------GVFDE 324
VL A A M+ ++E + D R V+
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 325 MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET 384
++ V T+++ C E + ++ GFSPD T++S +S+ G + +
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR--LTE--EPDLVTWTSLIHA 440
+ F ++ NSL+ +S+ + + + R L + +PD++++ ++I+A
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
Y + + A+ +F +M + G+VPD +++ + + A + + + M + P
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRP 767
Query: 501 DSDHYTCLVDLLGRYGLIDEA 521
+ + Y +VD + DEA
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEA 788
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 13/267 (4%)
Query: 374 LCGYASAITETLQTHA-IAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV 432
+CG A + E H I+ +S + LS + L+ YS CG A F E +L
Sbjct: 263 ICGEAEGLQEAKTVHGKISASVSHLD-LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
TW +I +A +G E A +MF + G +PD F G+ AC G V +GL +F M
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 493 TSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHANIGL 552
+ Y I P + Y LV++ G +DEA E + MP+E D + ++H N+ L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 553 AEWAAEKLFIIEPEKSVNYAAMSNIYASQRDWCDVESARKMIGDKGDAKVPGCSWIEVAN 612
++ AE + ++P + +N + + + ES +K G + G V +
Sbjct: 442 GDYCAEVVEFLDPTR-LNKQSREGFIPVKASDVEKESLKKRSG-----ILHG-----VKS 490
Query: 613 QVHSFVSRDKTHPKALEMYATLKMLHV 639
+ F + D P+ E++ L+ L +
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKM 517
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 111/215 (51%)
Query: 355 DMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCG 414
++L +G PD C ++ + + H ++ F+ + N +IS + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 415 NITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
+IT A + F + D+ +W ++ AY+ +G + A +FE+M G+ P+ +FL V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 475 ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVES 534
ACA G + + +F+ M + + I P ++HY ++ +LG+ G + EA + +R +P E +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 535 DTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSV 569
D A +LH +I L ++ E + ++P K+V
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAV 440
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 259 GANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA 318
GA D F L C L+ + K H L+ F D + + +I+M+ + +ITDA
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 319 RGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA 378
+ VFD M+ +++ +W+ ++ + G G + L L +M + G P+E T + C
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 379 SAITETL-------QTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR-LTEEPD 430
I E H I+ K + +L V + KCG++ A + R L EP
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKT--EHYLGV----LGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKML 458
W ++ + HG + M E M+
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMV 432
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 203/444 (45%), Gaps = 37/444 (8%)
Query: 118 LPGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFH 177
+PG V+S+N ++ R N S A + FK ML +V P+ T+N LI
Sbjct: 166 MPG--VLSYNAVLDATI-RSKRNISFAE---NVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 178 NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCN 233
NI V + L G + L+D Y K +++ + ++ + +L+ N
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 234 VMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILR 292
V+I+ +E + + G + DE T+++L+ C ++ + H+ +LR
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ-ALVMHAEMLR 338
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSE 348
V+ ++LI+ K N+ A D+M +R N + T++ G G +E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF-----LSVA 403
++LR+M GFSP +T ++ I+ +T ++ AIAV +E +
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALIN----GHCVTGKMED-AIAVLEDMKEKGLSPDVVSY 453
Query: 404 NSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
++++S + + ++ AL+ R E PD +T++SLI + + ++A +++E+ML
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
G+ PD ++ +++A G + K L N M ++PD Y+ L++ L +
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTR 572
Query: 520 EAFELL------RSMPVEVESDTL 537
EA LL S+P +V TL
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTL 596
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/502 (20%), Positives = 200/502 (39%), Gaps = 78/502 (15%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGV--AGRDNEND-------- 141
N ++ Y K ++I+D KL + + N++S+N++I G+ GR E
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 142 --------SSAPLCVSYFKR------------MLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
+ L Y K ML + P +T+ LI S + N+
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP----CRDLVMCNVMIS 237
++ G + LVD +++ G + A R + +V N +I+
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFD 296
+ + E+A ++ ++ G + D ++S++LS C + + + ++ ++ +
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIK 482
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKL 352
D + S+LI + + +A +++EML + + +I GD + L+L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 353 LRDMLREGFSPDELTISSTISLCG----------------YASAITETLQTHAIAVKLSF 396
+M+ +G PD +T S I+ Y ++ + H + S
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFR----LTEEPDLVTWTSLIHAYAFHGQAEKATE 452
EF SV SLI + G +T A + F +PD + +IH + G KA
Sbjct: 603 IEFKSVV-SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIV------PDSDHYT 506
++++M+ G + V+ + ++ A G V N + SV V +++
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKV-------NELNSVIVHVLRSCELSEAEQAK 714
Query: 507 CLVDLLGRYGLIDEAFELLRSM 528
LV++ R G +D ++L M
Sbjct: 715 VLVEINHREGNMDVVLDVLAEM 736
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 215/463 (46%), Gaps = 34/463 (7%)
Query: 107 EIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPD 162
+++DA LF E+ P ++V +N ++ +A + N+ D L +S +RM ++ D
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIA-KMNKFD----LVISLGERMQNLRISYD 114
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA----R 218
++N LI + + + + + +K+G++ D +L++ Y + A
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTL 277
+ F + V N +I L+ EA ++ + + G D FT+ ++++ +C
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC--- 231
Query: 278 EYYDIGKLAHSLILRQ---AFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNV 330
+ DI LA SL+ + ++DV++ + +I+ +N+ DA +F EM + NV
Sbjct: 232 KRGDI-DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 331 VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAI 390
V +N++I NYG S+ +LL DM+ +P+ +T S+ I + E + +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 391 AVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQ 446
+K S + +SLI+ + + A F L P++VT+ +LI + +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYT 506
E+ E+F +M G+V + V++ ++ G F M S + PD Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYS 469
Query: 507 CLVDLLGRYGLIDEA---FELLRSMPVEVESDTLGAFI-GSCK 545
L+D L +YG +++A FE L+ +E + T I G CK
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 201/483 (41%), Gaps = 71/483 (14%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL------PGRN 122
+R+ LP + ++K G+ + + +L+ Y K I +A L D++ P N
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP--N 184
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
V++N +I G+ + +++ V+ RM+ PD T+ ++ + +I +
Sbjct: 185 TVTFNTLIHGLFLHNKASEA-----VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISC 238
+ L K + D + ++D V +A F + + ++V N +I C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA-----HSLILRQ 293
+A + + + N + TFS+L+ + GKL + ++++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA-----FVKEGKLVEAEKLYDEMIKR 354
Query: 294 AFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEV 349
+ D D+ S+LIN + ++ + +A+ +F+ M+ + NVV +NT+I G E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 350 LKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA 409
++L R+M + G + +T N+LI
Sbjct: 415 MELFREMSQRGLVGNTVTY-----------------------------------NTLIQG 439
Query: 410 YSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
+ G+ A K F+ PD++T++ L+ +G+ EKA +FE + + PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 466 RVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
++ ++ G V G F + S+ + P+ YT ++ R GL +EA L
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 526 RSM 528
R M
Sbjct: 559 REM 561
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 27/251 (10%)
Query: 73 LPEGKQLHAHLI-KFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVVSWN 127
L E K + +I K F +V++ N ++ + K K +E+ +LF E+ R N V++N
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTY-NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 128 IMIRGV--AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL 185
+I+G+ AG + FK+M+ + V PD +T++ L+ ++ + + +
Sbjct: 435 TLIQGLFQAG-------DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYAL 241
Y K + D + +++ K G VE+ FC++ + ++++ MIS +
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQ----AFDS 297
L EEA ++F ++ DG + T+++L+ D K A + ++++ F
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRA----RLRDGDKAASAELIKEMRSCGFVG 603
Query: 298 DVLVASALINM 308
D S +INM
Sbjct: 604 DASTISMVINM 614
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 133/291 (45%), Gaps = 21/291 (7%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
++ ++K ++ +A+KL+DE+ R ++ +++ +I G D +++ F+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-----HMFEL 385
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
M+ + P+ VT+N LI + + G++L + G + L+ + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 214 VENARRAFC-----AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
+ A++ F VP D++ ++++ E+A +F L+ D +T++
Sbjct: 446 CDMAQKIFKKMVSDGVP-PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 269 SLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM-- 325
++ +C + D L SL L+ +V++ + +I+ + + +A +F EM
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 326 --LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ N +NT+I GD + +L+++M GF D TIS I++
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
G + +++++ EG+ D + LCG A A+ E H +S
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
NS+I YS CG++ AL F E +L TW +I +A +GQ E A + F + G
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
PD F + AC G + +GL +F M Y I+P +HY LV +L G +DEA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 524 LLRSMPVEVESDTLGAFIGSCKLHANIGLAE 554
+ SM V D + ++H ++ L +
Sbjct: 340 FVESMEPNV--DLWETLMNLSRVHGDLILGD 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 270 LLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN 329
+ +C + K+ H I SD+ +++I MY+ ++ DA VF+ M RN
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 330 VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHA 389
+ W +I G G + + +EG PD CG + E L
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL---- 302
Query: 390 IAVKLSFQEF-----LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFH 444
+ + ++E+ + SL+ ++ G + AL+ F + EP++ W +L++ H
Sbjct: 303 LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR-FVESMEPNVDLWETLMNLSRVH 361
Query: 445 GQ---AEKATEMFEKM--------LSCGVVPDRVSFL 470
G ++ +M E++ G+VP + S L
Sbjct: 362 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDL 398
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 166/387 (42%), Gaps = 14/387 (3%)
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP- 225
+ +I + ++ + + ++ G+ + AL+ Y + GL E A F ++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 226 ---CRDLVMCNVMI-SCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYD 281
+LV N +I +C ++ F+ ++ +G D TF+SLL+VC ++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
+ + + + DV + L++ K + A + +M ++ NVV+++T+I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G G E L L +M G + D ++ ++ +S+ E L + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEM 453
+ + N+L+ Y K G K F + P+L+T+++LI Y+ G ++A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
F + S G+ D V + ++ A GLV + + MT I P+ Y ++D G
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFG 595
Query: 514 RYGLIDEAFELLRSMPVEVESDTLGAF 540
R +D + + + S L A
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 185/443 (41%), Gaps = 67/443 (15%)
Query: 87 GFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIR--GVAGRDNEN 140
G+ + + + ++S Y + E+A +F+ + N+V++N +I G G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 141 DSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV 200
+F M V PD +TFN L+ C + L + D F
Sbjct: 323 ------VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376
Query: 201 GCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLR 256
L+D K G ++ A +P + ++V + +I +A +EA ++F +R
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL-ILRQ----AFDSDVLVASALINMYAK 311
G D ++++LLS+ Y +G+ +L ILR+ DV+ +AL+ Y K
Sbjct: 437 YLGIALDRVSYNTLLSI-----YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 312 NENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELT 367
+ + VF EM ++ N++ ++T+I G G E +++ R+ G D +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 368 ISSTI------SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISA------------ 409
S+ I L G A ++ + + I+ + NS+I A
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV------TYNSIIDAFGRSATMDRSAD 605
Query: 410 YSKCGNI---TSALKCFRLTEEPDLVTWTSLIHAYAFH--------GQAEKA--TEMFEK 456
YS G++ +SAL TE ++ + + + G E + E+F K
Sbjct: 606 YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK 665
Query: 457 MLSCGVVPDRVSFLGVLSACAHC 479
M + P+ V+F +L+AC+ C
Sbjct: 666 MHQLEIKPNVVTFSAILNACSRC 688
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 202/504 (40%), Gaps = 92/504 (18%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
C LKV + + ++ +I+ G + N +L K ++E DK++ E+
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 265
Query: 120 GRNV----VSWNIMIRGVAGRDNEND------------------SSAPLCVSYFKRMLLE 157
RN+ V++NI+I G + + S PL Y K+ L
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL-- 323
Query: 158 KVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA 217
F+ G + N G+ Y + + CAL D G +++A
Sbjct: 324 --------FDDAWGVTDEMLNAGIYPTTSTYNIYI---------CALCDF----GRIDDA 362
Query: 218 RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDT 276
R ++ D+V N ++ Y EA +F+ LR + T+++L+ +C++
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 277 LEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNV----VA 332
+L + + F DV+ + L+ + KN N++ A V+DEML + + A
Sbjct: 423 GNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481
Query: 333 WNTIIVGCGNYGDGSEVLKLLRDML-REGFSPDELTISSTISLCGYASAITETLQTHAIA 391
+ T VG GD + +L +M+ + +PD
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD--------------------------- 514
Query: 392 VKLSFQEFLSVANSLISAYSKCGNITSAL----KCFRLTEEPDLVTWTSLIHAYAFHGQA 447
L++ N I K GN+ A+ K FR+ PD VT+T++I Y +GQ
Sbjct: 515 --------LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 448 EKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTC 507
+ A ++++ML + P +++ ++ A G + + Y M + P+ +
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK-RGVRPNVMTHNA 625
Query: 508 LVDLLGRYGLIDEAFELLRSMPVE 531
L+ + + G IDEA+ L M E
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEE 649
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 202/475 (42%), Gaps = 35/475 (7%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLF----DELPGRNVVSWNIMIRGVA 134
H +++ GF + N++L L +IE A +L D P NVV++ +I G
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
R E D + L FK M + PD + ++ LI + +G+G +L + G
Sbjct: 298 KR-GEMDRAFDL----FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 195 DLDCFVGCALVDLYAKCGLVENA----RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
LD V + +D+Y K G + A +R C ++V ++I + EAF
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 251 MFNLLRMDGANGDEFTFSSLLS---VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
M+ + G T+SSL+ C L G + +++ + DV++ L++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 308 MYAKNENITDARGVFDEML---IR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+K + A +ML IR NVV +N++I G E LK+ R M G P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 364 DELTISSTISLCGYASAI------TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
D T ++ + + A T LQ + + ++V N +I KC I
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 418 SALKCF-RLTE---EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVL 473
A K F L E EPD+VT+ ++I Y + ++A +FE + P+ V+ ++
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 474 SACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ + F++M P++ Y CL+D + I+ +F+L M
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 199/482 (41%), Gaps = 63/482 (13%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL----PGRNVV 124
K L G +L + + G + + + + VY+K ++ A ++ + NVV
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
++ I+I+G+ D + ++L + P VT++ LI + N+ G
Sbjct: 393 TYTILIKGLC-----QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYA 240
L+ +K+G+ D + LVD +K GL+ +A R + + ++V+ N +I +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY------DIGKLAHSLILRQA 294
+EA +F L+ + G D TF++++ V + + IG L+ R
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVL 350
+D+ V + +I++ K I DA F+ + + ++V +NT+I G + E
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
++ + F P+ +T++ LI
Sbjct: 628 RIFELLKVTPFGPNTVTLTI-----------------------------------LIHVL 652
Query: 411 SKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
K ++ A++ F + E P+ VT+ L+ ++ E + ++FE+M G+ P
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLR 526
VS+ ++ G V + + F+ +++PD Y L+ + G + EA L
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Query: 527 SM 528
M
Sbjct: 772 HM 773
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 27/337 (8%)
Query: 229 LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-------VCDTLEYYD 281
L CN+++ C L+ P A + G D TF+SLL+ + D + +D
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
IL F +V+ + LI KN ++ A +F++M NVV +N ++
Sbjct: 178 -------QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G G + LLRDM++ P+ +T ++ I + E + + + +++S
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEM 453
+ SLI+ G + A + F L E P+ V +T+LIH + + E ++
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLG 513
F +M GVV + +++ ++ G FN M+S + PD Y L+D L
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS-RRAPPDIRTYNVLLDGLC 409
Query: 514 RYGLIDEA---FELLRSMPVEVESDTLGAFI-GSCKL 546
G +++A FE +R +++ T I G CKL
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 208/474 (43%), Gaps = 51/474 (10%)
Query: 87 GFC---HVLSLQNQILSVYLKCKEIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNE 139
GFC S +IL L + DA LF + P +++ + ++ V + N
Sbjct: 40 GFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLL-SVIAKMNR 98
Query: 140 NDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY---TVKVGFDL 196
D + +S F++M + + P T N ++ CV + + C+ +K+GF+
Sbjct: 99 YD----VVISLFEQMQILGIPPLLCTCN-IVMHCVCLSS--QPCRASCFLGKMMKLGFEP 151
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAV------PCRDLVMCNVMISCYALNCLPEEAFS 250
D +L++ Y +E+A F + P ++V +I C N A
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHAVE 209
Query: 251 MFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMY 309
+FN + +G+ + T+++L++ +C+ + D L ++ R+ + +V+ +ALI+ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR-IEPNVITFTALIDAF 268
Query: 310 AKNENITDARGVFDEML----IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
K + +A+ +++ M+ +V + ++I G YG E ++ M R G P+E
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANS-----LISAYSKCGNITSAL 420
+ ++ I + + + ++ I ++S + VAN+ LI Y G A
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMK---IFYEMSQKGV--VANTITYTVLIQGYCLVGRPDVAQ 383
Query: 421 KCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSAC 476
+ F PD+ T+ L+ +G+ EKA +FE M + + V++ ++
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 477 AHCGLVTKGLHYFNLMTSVYQ--IVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
G V F+L S++ + P+ YT ++ R GLI EA L + M
Sbjct: 444 CKLGKVEDA---FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 152/397 (38%), Gaps = 48/397 (12%)
Query: 81 AHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGR 136
++K GF L +L+ Y IEDA LFD++ G NVV++ +IR +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
+ N + V F +M P+ VT+N L+ + G L +K +
Sbjct: 202 RHLNHA-----VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
+ AL+D + K G + A+ + NVMI ++ P
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELY-----------NVMIQ---MSVYP----------- 291
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
D FT+ SL++ D + L+ R + ++ + LI+ + K++ +
Sbjct: 292 ------DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 317 DARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
D +F EM ++ N + + +I G G ++ M PD T + +
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSAL----KCFRLTEE 428
+ + L K + +I K G + A F +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
P+++T+T++I + G +A +F+KM G +P+
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 208/499 (41%), Gaps = 39/499 (7%)
Query: 58 LFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDE 117
L N KV+A + +++ L FG ++ + EI+ A L +
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGV---------VMKAFCAVNEIDSALSLLRD 242
Query: 118 LPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSC 173
+ N V + +I ++ + N++ + + M L VPD TFN +I
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEA-----LQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 174 VQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCN 233
+F I ++ + GF D L++ K G V+ A+ F +P ++V+ N
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 234 VMISCYALNCLPEEAFSMF-NLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSL--- 289
+I + + ++A ++ +++ G D T++SL+ Y+ G + +L
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI-----YGYWKEGLVGLALEVL 412
Query: 290 --ILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNY 343
+ + +V + L++ + K I +A V +EM L N V +N +I
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
E +++ R+M R+G PD T +S IS I L +
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 404 NSLISAYSKCGNITSALKCFR---LTEEP-DLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
N+LI+A+ + G I A K P D +T+ SLI G+ +KA +FEKML
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
G P +S +++ G+V + + + M + PD + L++ L R G I+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 520 EAFELLRSMPVE-VESDTL 537
+ + R + E + DT+
Sbjct: 652 DGLTMFRKLQAEGIPPDTV 670
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 61/396 (15%)
Query: 104 KCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPL---CVSYFKRMLLEKVV 160
K ++ A LF +P +V +N +I G +D+ A L SY +V
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY-------GIV 386
Query: 161 PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRA 220
PD T+N LI + +G+ +++ G + + LVD + K G ++ A
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 221 FCAVPCRDL----VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCD 275
+ L V N +IS + EA +F + G D +TF+SL+S +C+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 276 TLEYYDIGKLAHSLILRQAFDSDVLVASA-----LINMYAKNENITDARGVFDEMLIR-- 328
+ ++ H+L L + S+ +VA+ LIN + + I +AR + +EM+ +
Sbjct: 507 ------VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 329 --NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
+ + +N++I G G+ + L MLR+G +P ++ + I+ + + E ++
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQ 446
FQ+ + + S PD+VT+ SLI+ G+
Sbjct: 621 ---------FQKEMVLRGS----------------------TPDIVTFNSLINGLCRAGR 649
Query: 447 AEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
E MF K+ + G+ PD V+F ++S G V
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 211/491 (42%), Gaps = 80/491 (16%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N+++ V+++ + A L+ ++ R N+ S+NI+I+ + +S F
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC-----DCHKLSFSLSTF 164
Query: 152 KRMLLEKVVPDYVTFNGLI-GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
++ PD VTFN L+ G C++ I + L Y V+ GF AL D +
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLE-DRISEALALFGYMVETGF----LEAVALFDQMVE 219
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
GL P ++ N +I+ L EA ++ N + G + D T+ ++
Sbjct: 220 IGLT----------PV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 271 LS-VCDTLEYYDIGKLAHSLILRQAFDS-----DVLVASALINMYAKNENITDARGVFDE 324
++ +C +G +L L + DV++ SA+I+ K+ + +DA+ +F E
Sbjct: 268 VNGMCK------MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 325 MLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL------ 374
ML + NV +N +I G ++G S+ +LLRDM+ +PD LT ++ IS
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 375 --------------CGYASAITETLQTHAIAVKLSFQEF-----------LSVANSLISA 409
C + +T + F + + N++I
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Query: 410 YSKCGNITSALKCFRLTEEPDLV----TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
Y + + ++ R LV T+ +LIH + A ++F++M+S GV PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 466 RVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
++ +L + + L F ++ + +I D+ Y ++ + + +DEA++L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVI-QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 526 RSMPVE-VESD 535
S+P+ VE D
Sbjct: 561 CSLPIHGVEPD 571
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 129/287 (44%), Gaps = 23/287 (8%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++S +K ++ +A+KL DE+ R + V++N MI G + +D+
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--------- 420
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
K M PD VTFN +I + + G+QL + G + L+ + +
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 212 GLVENARRAFCAV----PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
+ A+ F + C D + CN+++ + N EEA +F +++M + D +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 268 SSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
+ ++ +C + + L SL + + DV + +I+ + I+DA +F +M
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 327 IR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
+ +NT+I GC G+ + ++L+ +M GFS D TI
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 190/472 (40%), Gaps = 78/472 (16%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPL----------CVSYFKRMLLEKVVPDYVTFNGLI- 170
+VV++N ++ G+ D +++ A V+ F +M+ + P +TFN LI
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 171 GSCVQFH--------NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
G C++ N VG LH V G ++ C + D + L+
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM--CKMGDTKSALNLLSKMEETHI 292
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYD 281
D+V+ + +I + +A +F+ + G + FT++ ++ C + D
Sbjct: 293 KP---DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
+L +I R+ + DVL +ALI+ K + +A + DEML R + V +N++I
Sbjct: 350 AQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 338 VGC---GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
G + D + L+ SPD +T ++ I + A + E +Q +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKA 450
+ N+LI + + N+ +A F+ PD +T L++ + + + E+A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 451 TEMFEKMLSCGVVPDRVSFLGVLSACAH-----------CGLVTKGL----HYFNLMTSV 495
E+FE + + D V++ ++ C L G+ +N+M S
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 496 Y-------------------QIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ PD+ Y L+ + G ID++ EL+ M
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 341 GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFL 400
GN+ + EVL L + +G++ D + + LCG A+ H + L +
Sbjct: 98 GNWREAVEVLDYLEN---KGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV 154
Query: 401 SVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC 460
N++I YS C ++ ALK F E + T ++ + +G E+A ++F +
Sbjct: 155 GARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
G P+ F V S C G V +G F M Y IVP +HY + +L G +DE
Sbjct: 215 GNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDE 274
Query: 521 AFELLRSMPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
A + MP+E D + ++H ++ L + AE
Sbjct: 275 ALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAE 312
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 20/261 (7%)
Query: 230 VMCNVMISCYALNCLP---EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA 286
V NV I + C+ EA + + L G D L +C E + ++
Sbjct: 82 VAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVV 141
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT----IIVGC-G 341
H I+ DV +A+I MY+ ++ DA VF+EM WN+ +++ C
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEM-----PEWNSGTLCVMMRCFV 196
Query: 342 NYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITE-TLQTHAIAVKLSFQEFL 400
N G G E + L EG P+ + S C + E +LQ A+ + +
Sbjct: 197 NNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSM 256
Query: 401 SVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHGQAE---KATEMFEK 456
+S+ + G++ AL R+ EP + W +L++ HG E + E+ EK
Sbjct: 257 EHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 316
Query: 457 MLSCGVVPDRVSFLGVLSACA 477
+ + + D+VS G+++ A
Sbjct: 317 LDATRL--DKVSSAGLVATKA 335
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 198/474 (41%), Gaps = 52/474 (10%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVV 124
+R+ L + ++K G+ + N +L+ + I +A L D++ + V
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
++ ++ G+ + +++ V+ +RM+++ PD VT+ +I + + +
Sbjct: 182 TFTTLVHGLFQHNKASEA-----VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCL 244
L K + D + ++D C D
Sbjct: 237 LLNKMEKGKIEADVVIYNTIID-------------GLCKYKHMD---------------- 267
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVAS 303
+AF +FN + G D FT++ L+S +C+ + D +L S +L + + D++ +
Sbjct: 268 --DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL-SDMLEKNINPDLVFFN 324
Query: 304 ALINMYAKNENITDARGVFDEML-----IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLR 358
ALI+ + K + +A ++DEM+ +VVA+NT+I G Y E +++ R+M +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 359 EGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITS 418
G + +T ++ I A V + N L+ GN+ +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 419 ALKCFRLTEEPDL----VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLS 474
AL F ++ D+ VT+T++I A G+ E ++F + GV P+ V++ ++S
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 475 ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
GL + F M + P+S Y L+ R G + EL++ M
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 214/515 (41%), Gaps = 67/515 (13%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
N+ +++I I R S L ++ +M+ P VT N L+ + I
Sbjct: 109 NLYTYSIFINYFCRR-----SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
+ L V++G+ D LV GL ++ + +
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKAS--------------------- 197
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVL 300
EA ++ + + G D T+ ++++ +C E D+ + + + ++DV+
Sbjct: 198 -----EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLLNKMEKGKIEADVV 251
Query: 301 VASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
+ + +I+ K +++ DA +F++M + +V +N +I NYG S+ +LL DM
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 357 LREGFSPDELTISSTISLCGYASAITET--LQTHAIAVKLSFQEFLSVANSLISAYSKCG 414
L + +PD + ++ I + E L + K F + ++ N+LI + K
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY-NTLIKGFCKYK 370
Query: 415 NITSALKCFRLTEEPDLV----TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFL 470
+ ++ FR + LV T+T+LIH + + A +F++M+S GV PD +++
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 471 GVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPV 530
+L + G V L F M + D YT +++ L + G +++ ++L S+ +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQK-RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 531 EVESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPE-----KSVNYAAMSNIYASQRDWC 585
+ + + GL E A+ LF+ E S Y + I A RD
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKE-EADALFVEMKEDGPLPNSGTYNTL--IRARLRDGD 546
Query: 586 DVESAR-----KMIGDKGDAKVPGCSWIEVANQVH 615
+ SA + G GDA G V N +H
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGL----VTNMLH 577
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHV-LSLQNQILSVYLKCKEIED 110
+PD V F + K L E ++L+ ++K C + N ++ + K K +E+
Sbjct: 317 NPDLV--FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 111 ADKLFDELPGR----NVVSWNIMIRGV-AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVT 165
++F E+ R N V++ +I G RD +N FK+M+ + V PD +T
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV------FKQMVSDGVHPDIMT 428
Query: 166 FNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP 225
+N L+ N+ + + Y K LD +++ K G VE+ FC++
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 226 CR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
+ ++V M+S + L EEA ++F ++ DG + T+++L+
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 211/491 (42%), Gaps = 80/491 (16%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N+++ V+++ + A L+ ++ R N+ S+NI+I+ + +S F
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC-----DCHKLSFSLSTF 164
Query: 152 KRMLLEKVVPDYVTFNGLI-GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
++ PD VTFN L+ G C++ I + L Y V+ GF AL D +
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLE-DRISEALALFGYMVETGF----LEAVALFDQMVE 219
Query: 211 CGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
GL P ++ N +I+ L EA ++ N + G + D T+ ++
Sbjct: 220 IGLT----------PV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 271 LS-VCDTLEYYDIGKLAHSLILRQAFDS-----DVLVASALINMYAKNENITDARGVFDE 324
++ +C +G +L L + DV++ SA+I+ K+ + +DA+ +F E
Sbjct: 268 VNGMCK------MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 325 MLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL------ 374
ML + NV +N +I G ++G S+ +LLRDM+ +PD LT ++ IS
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 375 --------------CGYASAITETLQTHAIAVKLSFQEF-----------LSVANSLISA 409
C + +T + F + + N++I
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Query: 410 YSKCGNITSALKCFRLTEEPDLV----TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
Y + + ++ R LV T+ +LIH + A ++F++M+S GV PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 466 RVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
++ +L + + L F ++ + +I D+ Y ++ + + +DEA++L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVI-QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 526 RSMPVE-VESD 535
S+P+ VE D
Sbjct: 561 CSLPIHGVEPD 571
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 23/292 (7%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++S +K ++ +A+KL DE+ R + V++N MI G + +D+
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--------- 420
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
K M PD VTFN +I + + G+QL + G + L+ + +
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 212 GLVENARRAFCAV----PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
+ A+ F + C D + CN+++ + N EEA +F +++M + D +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 268 SSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
+ ++ +C + + L SL + + DV + +I+ + I+DA +F +M
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 327 IR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+ +NT+I GC G+ + ++L+ +M GFS D TI L
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 192/474 (40%), Gaps = 82/474 (17%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPL----------CVSYFKRMLLEKVVPDYVTFNGLI- 170
+VV++N ++ G+ D +++ A V+ F +M+ + P +TFN LI
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 171 GSCVQFH--------NIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFC 222
G C++ N VG LH V G ++ C + D + L+
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM--CKMGDTKSALNLLSKMEETHI 292
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYD 281
D+V+ + +I + +A +F+ + G + FT++ ++ C + D
Sbjct: 293 K---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
+L +I R+ + DVL +ALI+ K + +A + DEML R + V +N++I
Sbjct: 350 AQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 338 VGC---GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
G + D + L+ SPD +T ++ I + A + E +Q +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKA 450
+ N+LI + + N+ +A F+ PD +T L++ + + + E+A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 451 TEMFEKM------------------------------LSC-----GVVPDRVSFLGVLSA 475
E+FE + L C GV PD ++ ++S
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 476 -CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
C + + + + + ++ PD+ Y L+ + G ID++ EL+ M
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHE--PDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 189/439 (43%), Gaps = 64/439 (14%)
Query: 108 IEDADKLFDELPGRNVVSWNIMIRGV-AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
+E K+ D G ++V+ NI++ +GR +SYF+ M KV PD TF
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK------ALSYFELMKGAKVRPDTTTF 286
Query: 167 NGLIGSCVQFHNIGVGIQL--HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV 224
N +I + + L + D +++ LY+ G +EN R F A+
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 225 PCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
++V N ++ YA++ + A S+ ++ +G D +++ LL+
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 281 DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTI 336
K ++ ++ +V+ +ALI+ Y N + +A +F +M + NVV+ T+
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 337 IVGC--------------------------------GNYGDGSEVLK---LLRDMLREGF 361
+ C G+Y + +E+ K L + M ++
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 362 SPDELT----ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
D +T IS + + Y AI+ + +++ L+ + V +S++ AYSK G +T
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE----VYSSVLCAYSKQGQVT 582
Query: 418 SALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVL 473
A F + EPD++ +TS++HAY + KA E+F +M + G+ PD ++ ++
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 474 SACAHCGLVTKGLHYFNLM 492
A G + +LM
Sbjct: 643 RAFNKGGQPSNVFVLMDLM 661
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVA-----WNTIIVGCGNYGDGSEVLKL 352
D ALIN + + A + D+ML R +A +N +I CG+ G+ E L++
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDML-RAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
+ M G PD +T + +S ++ L + + + N +I SK
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 413 CGNITSALKCFRLTEE------PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
G + AL F E PD+VT+TS++H Y+ G+ E +FE M++ G+ P+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ--IVPDSDHYTCLVDLLGRY---GLIDEA 521
VS+ ++ A A G+ L +++ + Q I+PD YTCL++ GR G E
Sbjct: 356 VSYNALMGAYAVHGMSGTAL---SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 522 FELLR 526
F ++R
Sbjct: 413 FLMMR 417
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 141/346 (40%), Gaps = 76/346 (21%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
DLV N+++S Y +A S F L++ D TF+ ++ Y + KL
Sbjct: 247 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII--------YCLSKLGQ 298
Query: 288 SLILRQAFDS----------DVLVASALINMYAKNENITDARGVFDEM----LIRNVVAW 333
S F+S DV+ ++++++Y+ I + R VF+ M L N+V++
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
N ++ +G L +L D+ + G PD ++ + C
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT-----C------------------ 395
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEK 449
L+++Y + A + F + +P++VT+ +LI AY +G +
Sbjct: 396 ------------LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--------LVTKGLHYFNLMTSVYQIVPD 501
A E+F +M G+ P+ VS +L+AC+ L NL T+ Y
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI-GSCKL 546
S Y +L L ++ +R V+ +S T I GSC++
Sbjct: 504 S--YINAAELEKAIAL----YQSMRKKKVKADSVTFTILISGSCRM 543
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 189/439 (43%), Gaps = 64/439 (14%)
Query: 108 IEDADKLFDELPGRNVVSWNIMIRGV-AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
+E K+ D G ++V+ NI++ +GR +SYF+ M KV PD TF
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK------ALSYFELMKGAKVRPDTTTF 154
Query: 167 NGLIGSCVQFHNIGVGIQL--HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV 224
N +I + + L + D +++ LY+ G +EN R F A+
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 225 PCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYY 280
++V N ++ YA++ + A S+ ++ +G D +++ LL+
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 281 DIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTI 336
K ++ ++ +V+ +ALI+ Y N + +A +F +M + NVV+ T+
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 337 IVGC--------------------------------GNYGDGSEVLK---LLRDMLREGF 361
+ C G+Y + +E+ K L + M ++
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 362 SPDELT----ISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNIT 417
D +T IS + + Y AI+ + +++ L+ + V +S++ AYSK G +T
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE----VYSSVLCAYSKQGQVT 450
Query: 418 SALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVL 473
A F + EPD++ +TS++HAY + KA E+F +M + G+ PD ++ ++
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Query: 474 SACAHCGLVTKGLHYFNLM 492
A G + +LM
Sbjct: 511 RAFNKGGQPSNVFVLMDLM 529
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 298 DVLVASALINMYAKNENITDARGVFDEMLIRNVVA-----WNTIIVGCGNYGDGSEVLKL 352
D ALIN + + A + D+ML R +A +N +I CG+ G+ E L++
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDML-RAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 353 LRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
+ M G PD +T + +S ++ L + + + N +I SK
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 413 CGNITSALKCFRLTEE------PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
G + AL F E PD+VT+TS++H Y+ G+ E +FE M++ G+ P+
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ--IVPDSDHYTCLVDLLGRY---GLIDEA 521
VS+ ++ A A G+ L +++ + Q I+PD YTCL++ GR G E
Sbjct: 224 VSYNALMGAYAVHGMSGTAL---SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 522 FELLR 526
F ++R
Sbjct: 281 FLMMR 285
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 141/346 (40%), Gaps = 76/346 (21%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
DLV N+++S Y +A S F L++ D TF+ ++ Y + KL
Sbjct: 115 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII--------YCLSKLGQ 166
Query: 288 SLILRQAFDS----------DVLVASALINMYAKNENITDARGVFDEM----LIRNVVAW 333
S F+S DV+ ++++++Y+ I + R VF+ M L N+V++
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVK 393
N ++ +G L +L D+ + G PD ++ + C
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT-----C------------------ 263
Query: 394 LSFQEFLSVANSLISAYSKCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEK 449
L+++Y + A + F + +P++VT+ +LI AY +G +
Sbjct: 264 ------------LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 450 ATEMFEKMLSCGVVPDRVSFLGVLSACAHCG--------LVTKGLHYFNLMTSVYQIVPD 501
A E+F +M G+ P+ VS +L+AC+ L NL T+ Y
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 502 SDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFI-GSCKL 546
S Y +L L ++ +R V+ +S T I GSC++
Sbjct: 372 S--YINAAELEKAIAL----YQSMRKKKVKADSVTFTILISGSCRM 411
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 164/393 (41%), Gaps = 21/393 (5%)
Query: 153 RMLLEKV--VPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG-------CA 203
+M++ KV +P+ T + L+ V+F + G+ ++L V VG D ++ C
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
L DL ++ + C V ++V NV+I EA + L D
Sbjct: 240 LKDLSRAKEMIAHMEATGCDV---NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPD 296
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA----R 319
T+ +L+ ++ ++IG +L F S+L+ K I +A +
Sbjct: 297 VVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 320 GVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
V D + N+ +N +I E L M + G P+++T S I +
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 380 AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSA----LKCFRLTEEPDLVTWT 435
+ L V + + NSLI+ + K G+I++A + EP +VT+T
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSV 495
SL+ Y G+ KA ++ +M G+ P +F +LS GL+ + FN M
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE- 535
Query: 496 YQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ + P+ Y +++ G + +AFE L+ M
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 201/501 (40%), Gaps = 86/501 (17%)
Query: 68 AKRAFLPEGKQLHA---HLIKFG-FCHVLSLQNQILSVYLK---------------CKEI 108
K + LPE + L A L+KF F + L N ++SV ++ K++
Sbjct: 184 TKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDL 243
Query: 109 EDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYV 164
A ++ + N+V +N++I G+ + ++ V K + + + PD V
Sbjct: 244 SRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA-----VGIKKDLAGKDLKPDVV 298
Query: 165 TFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV 224
T+ L+ + +G+++ + + F +LV+ K G +E
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE--------- 349
Query: 225 PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIG 283
EA ++ + G + + F +++L+ S+C ++++
Sbjct: 350 ----------------------EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE-A 386
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVG 339
+L + + + + S LI+M+ + + A EM L +V +N++I G
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASA--ITETLQTHAIAVKLSFQ 397
+GD S + +M+ + P +T +S + GY S I + L+ +
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG--GYCSKGKINKALRLYHEMTGKGIA 504
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEM 453
+ +L+S + G I A+K F E P+ VT+ +I Y G KA E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 454 FEKMLSCGVVPDRVSFLGVLSACAHCGLVTK------GLHYFNLMTSVYQIVPDSDHYTC 507
++M G+VPD S+ ++ G ++ GLH N + +I YT
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN--CELNEIC-----YTG 617
Query: 508 LVDLLGRYGLIDEAFELLRSM 528
L+ R G ++EA + + M
Sbjct: 618 LLHGFCREGKLEEALSVCQEM 638
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 175/418 (41%), Gaps = 70/418 (16%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGRNV----VSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
+LS + I DA KLF+E+ NV V++N+MI G E D S + K
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC---EEGDMSKAF--EFLKE 567
Query: 154 MLLEKVVPDYVTFNGLI-GSCV--QFHNIGVGIQ-LHCYTVKVGFDLD--CFVGCALVDL 207
M + +VPD ++ LI G C+ Q V + LH K +L+ C+ G L+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH----KGNCELNEICYTG--LLHG 621
Query: 208 YAKCGLVENARRAFCAVPCRDLVMCNVMIS--CYALNCLPEEAFSMFNLLRMDGA--NGD 263
+ + G +E A C+++V V + CY + +DG+ + D
Sbjct: 622 FCREGKLEEALSV-----CQEMVQRGVDLDLVCYGV--------------LIDGSLKHKD 662
Query: 264 EFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFD 323
F LL E +D G D ++ +++I+ +K + +A G++D
Sbjct: 663 RKLFFGLLK-----EMHDRG-----------LKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 324 EML----IRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYAS 379
M+ + N V + +I G G +E L M P+++T + +
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 380 A-ITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEE---PDLVTW 434
+ + ++ H +K + N LI + + G I A + R+ + PD +T+
Sbjct: 767 VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLM 492
T++I+ +KA E++ M G+ PDRV++ ++ C G + K N M
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 105/544 (19%), Positives = 198/544 (36%), Gaps = 123/544 (22%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR-----NV 123
KR + E L ++ FG L + N ++ K ++ +A+ LFD + G+ N
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM-GKIGLRPND 402
Query: 124 VSWNIMIRGVAGRDNEN----------DSSAPLCV--------------------SYFKR 153
V+++I+I R + D+ L V +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
M+ +K+ P VT+ L+G I ++L+ G + L+ + GL
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 214 VENARRAFCAV------PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
+ +A + F + P R V NVMI Y +AF + G D +++
Sbjct: 523 IRDAVKLFNEMAEWNVKPNR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 268 SSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
L+ +C T + + K+ + + + + + + L++ + + + +A V EM+
Sbjct: 581 RPLIHGLCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 327 IRNV----VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
R V V + +I G + D LL++M G PD++
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV---------------- 683
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLI 438
+ S+I A SK G+ A + L P+ VT+T++I
Sbjct: 684 -------------------IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSF-------------------------LGVL 473
+ G +A + KM VP++V++ G+L
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 474 SACAHCGLVTKGLHYFNLMTSVYQIV---------PDSDHYTCLVDLLGRYGLIDEAFEL 524
+ A ++ +G + +++ PD YT +++ L R + +A EL
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 525 LRSM 528
SM
Sbjct: 845 WNSM 848
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 206/504 (40%), Gaps = 64/504 (12%)
Query: 79 LHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLF----DELPGRNVVSWNIMIRGVA 134
H +++ GF + N++L L +IE A +L D P NVV++ +I G
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 135 GRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGF 194
R E D + L FK M + PD + ++ LI + +G+G +L + G
Sbjct: 298 KR-GEMDRAFDL----FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 195 DLDCFVGCALVDLYAKCGLVENA----RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFS 250
LD V + +D+Y K G + A +R C ++V ++I + EAF
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 251 MFNLLRMDGANGDEFTFSSLLS---VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
M+ + G T+SSL+ C L G + +++ + DV++ L++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 308 MYAKNENITDARGVFDEML---IR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
+K + A +ML IR NVV +N++I G E LK+ R M G P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 364 DELTISSTISLCGYASAITET-----------LQTHAIAV-------------KLSFQEF 399
D T ++ + + + E L+ A+A + Q F
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 400 -----------LSVANSLISAYSKCGNITSALKCF-RLTE---EPDLVTWTSLIHAYAFH 444
++V N +I KC I A K F L E EPD+VT+ ++I Y
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
+ ++A +FE + P+ V+ ++ + + F++M P++
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVT 708
Query: 505 YTCLVDLLGRYGLIDEAFELLRSM 528
Y CL+D + I+ +F+L M
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEM 732
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 208/487 (42%), Gaps = 44/487 (9%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL----PGRNVV 124
K L G +L + + G + + + + VY+K ++ A ++ + NVV
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
++ I+I+G+ D + ++L + P VT++ LI + N+ G
Sbjct: 393 TYTILIKGLC-----QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYA 240
L+ +K+G+ D + LVD +K GL+ +A R + + ++V+ N +I +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL-----RQAF 295
+EA +F L+ + G D TF++++ V +E G+L +L L +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV-SIME----GRLEEALFLFFRMFKMGL 562
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNT--------IIVGCGNYGDGS 347
+ D L LI+ + K+ T +FD ++ RN ++ + ++ C D S
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 348 EVLKLLRDMLREGFSPDELTISSTISLCGYAS--AITETLQTHAIAVKLSFQEFLSVANS 405
K +++ PD +T ++ I CGY S + E + + F
Sbjct: 622 ---KFFNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 406 LISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
LI K ++ A++ F + E P+ VT+ L+ ++ E + ++FE+M G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 462 VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+ P VS+ ++ G V + + F+ +++PD Y L+ + G + EA
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 522 FELLRSM 528
L M
Sbjct: 796 ALLYEHM 802
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 187/443 (42%), Gaps = 48/443 (10%)
Query: 96 NQILSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
+++LS K K + LF + G ++ S+NI+I + S + +S
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC-----RCSRFVIALSVV 127
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
+M+ PD VT + LI Q + + I L ++GF D + ++D K
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 212 GLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL 271
GLV +A +F+ + DG D T++SL+
Sbjct: 188 GLVN-------------------------------DAVELFDRMERDGVRADAVTYNSLV 216
Query: 272 S-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR-- 328
+ +C + + D +L +++R +V+ +A+I+++ K ++A +++EM R
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIV-PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 329 --NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQ 386
+V +N++I G +G E ++L M+ +G PD +T ++ I+ + + E +
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 387 THAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEEPDLVTWTSLIHAYAFHG 445
+ N++I Y + G +A + F R+ P++ T++ L++ +
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNW 395
Query: 446 QAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHY 505
+ EKA +FE M + D ++ V+ G V F + S + PD Y
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSY 454
Query: 506 TCLVDLLGRYGLIDEAFELLRSM 528
T ++ R D++ L R M
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKM 477
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 180/436 (41%), Gaps = 70/436 (16%)
Query: 87 GFCHVLSLQNQILSVYLK----CKEIEDADKLFDELPGRNVVSWNIMIRG-VAGRDNEND 141
GF + ++++Y K K +E + + +E N+ ++++MI G V +D N
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN- 537
Query: 142 SSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG 201
+ F+ M+ E + PD + +N +I + N+ IQ K+
Sbjct: 538 -----AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 202 CALVDLYAKCGLVENA-------RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNL 254
++ YAK G + + RR C VP + N +I+ E+A + +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGC-VPT--VHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 255 LRMDGANGDEFTFSSLL----SVCDT---LEYYDIGKLAHSLILRQAFDSDVLVASALIN 307
+ + G + +E T++ ++ SV DT EY+ + + + D D+ AL+
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF-------TRLQNEGLDVDIFTYEALLK 702
Query: 308 MYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSP 363
K+ + A V EM RN+ +N +I G GD E L++ M +EG P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 364 DELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF 423
D T +S IS C A + QT + E L V
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQT------IEEMEALGV--------------------- 795
Query: 424 RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVT 483
+P++ T+T+LI +A EKA +E+M + G+ PD+ + +L++ +
Sbjct: 796 ----KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 484 KGLHYFNLMTSVYQIV 499
+ Y +MT ++V
Sbjct: 852 EAYIYSGVMTICKEMV 867
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/409 (19%), Positives = 156/409 (38%), Gaps = 51/409 (12%)
Query: 151 FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAK 210
F+RM + P + LI + ++ + + G ++ +V ++K
Sbjct: 332 FERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK 391
Query: 211 CGLVENARRAFCAVP----CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFT 266
G E A F + + +I + C E A ++ + +G +
Sbjct: 392 AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDA----RGVF 322
+ +++ + G + + F V+ LIN+Y K I+ A R +
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 323 DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAIT 382
+E + N+ ++ +I G D + + DM++EG PD +
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI---------------- 555
Query: 383 ETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFR----LTEEPDLVTWTSLI 438
+ N++ISA+ GN+ A++ + L P T+ +I
Sbjct: 556 -------------------LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 439 HAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQI 498
H YA G ++ E+F+ M CG VP +F G+++ + K + + MT + +
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT-LAGV 655
Query: 499 VPDSDHYTCLVDLLGRYGLIDEAFEL---LRSMPVEVESDTLGAFIGSC 544
+ YT ++ G +AFE L++ ++V+ T A + +C
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 21/234 (8%)
Query: 303 SALINMYAKNENITDARGVFDEMLIRNVVA----WNTIIVGCGNYGDGSEVLKLLRDMLR 358
+ LIN + + A + DEM + V A + I+ G + GD + + +
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 359 EGFSPDELTISSTISLC------GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
EG D T + + C A A+T+ + I + SF V N LI +++
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP-RNSF-----VYNILIDGWAR 741
Query: 413 CGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
G++ A + ++ PD+ T+TS I A + G +AT+ E+M + GV P+ +
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
+ ++ A L K L + M ++ I PD Y CL+ L I EA+
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAM-GIKPDKAVYHCLLTSLLSRASIAEAY 854
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 11/248 (4%)
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEML----IRNVVAWNTIIVGCGNYGD 345
+++ + ++ +L+N + + + + DA +FD+M+ NVV +NTII G
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 346 GSEVLKLLRDMLREGFSPDELTISSTIS-LCGYASAITETLQTHAIAVKLSFQEFLSVAN 404
L LL M ++G PD +T +S IS LC T + + + + + N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF-N 260
Query: 405 SLISAYSKCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSC 460
+LI A K G ++ A + + R + +PD+VT++ LI+ + + ++A EMF M+S
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 461 GVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDE 520
G PD V++ +++ V G+ F M S +V ++ YT L+ R G ++
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 521 AFELLRSM 528
A E+ R M
Sbjct: 380 AEEIFRRM 387
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 21/297 (7%)
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
+ A + N + DG D T++SL+S +C + + D ++ + R+ + DV +A
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNA 261
Query: 305 LINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREG 360
LI+ K +++A ++EM+ R ++V ++ +I G Y E ++ M+ +G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 361 FSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANS-----LISAYSKCGN 415
PD +T S I+ GY + H + + + V N+ LI Y + G
Sbjct: 322 CFPDVVTYSILIN--GYCKS---KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 416 ITSALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLG 471
+ A + FR P+++T+ L+H +G+ EKA + M G+ D V++
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 472 VLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
++ G V + + + ++PD YT ++ L + GL EA L R M
Sbjct: 437 IIRGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 162/403 (40%), Gaps = 60/403 (14%)
Query: 81 AHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGR 136
+IK G + +L+ + + + DA +FD++ G NVV +N +I G+ +
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC-K 198
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLI-GSCVQFHNIGVGIQLHCYTVKVGFD 195
+ D++ L RM + + PD VT+N LI G C + C T + +
Sbjct: 199 SKQVDNALDL----LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 196 LDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSM 251
D F AL+D K G V A + + R D+V +++I + +EA M
Sbjct: 255 -DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 252 FNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLIL-----RQAFDSDVLVASALI 306
F + G D T+S L++ Y K+ H + L ++ + + + LI
Sbjct: 314 FGFMVSKGCFPDVVTYSILIN-----GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 307 NMYAKNENITDARGVFDEMLI----RNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
Y + + A +F M+ N++ +N ++ G + G + L +L DM + G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKC 422
D +T + I A + + +I +L C
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAW-----------------------------DIYCSLNC 459
Query: 423 FRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
L PD+ T+T+++ G +A +F KM G++P+
Sbjct: 460 QGLM--PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 136/332 (40%), Gaps = 54/332 (16%)
Query: 82 HLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVAGRD 137
++ G+ + + N I+ K K++++A L + + G +VV++N +I G+
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 138 NENDSSAPL---------------------CVS---------YFKRMLLEKVVPDYVTFN 167
+D++ + CV +++ M+ + PD VT++
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 168 GLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVP-- 225
LI + + ++ + V G D L++ Y K VE+ + FC +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 226 --CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDI 282
R+ V ++I Y A +F + G + + T++ LL +CD
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN------ 409
Query: 283 GKLAHSLIL-----RQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAW 333
GK+ +L++ + D+D++ + +I K + DA ++ + L+ ++ +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 334 NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
T+++G G E L R M +G P+E
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 24/241 (9%)
Query: 343 YGDGSEVLKLLRDMLREGFSPDEL----------TISSTISLCGYASAITETLQTHAIAV 392
Y +GS+ ++LR+ +R D L + S SAI++ + +
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY 102
Query: 393 KLSFQEFLSVA------NSLISAYSKCGNITSAL----KCFRLTEEPDLVTWTSLIHAYA 442
+ L + N L++ + +C ++ AL K +L EP +VT+ SL++ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 443 FHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDS 502
+ A MF++M+ G P+ V + ++ V L N M I PD
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDV 221
Query: 503 DHYTCLVDLLGRYGLIDEAFELLRSM-PVEVESD--TLGAFIGSCKLHANIGLAEWAAEK 559
Y L+ L G +A ++ M E+ D T A I +C + AE E+
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 560 L 560
+
Sbjct: 282 M 282
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/531 (19%), Positives = 217/531 (40%), Gaps = 45/531 (8%)
Query: 18 YSFVAQCFSNSSHQPHPWSRLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGK 77
+ ++ +SNS+ H +S + +S ++ D + N L+ + L EG
Sbjct: 75 FETLSSGYSNSNGNGH-YSSVNSSFALED-----------VESNNHLRQMVRTGELEEGF 122
Query: 78 QLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGV 133
+ +++ G + ++ + + + A K+ + L G +V+++N+MI G
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG-------IQLH 186
N++ +S RM V PD VT+N ++ S + +Q
Sbjct: 183 CKAGEINNA-----LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 187 CYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE 246
CY + + + C + L++ R C D+V NV+++ +
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP---DVVTYNVLVNGICKEGRLD 291
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
EA N + G + T + +L S+C T + D KL + LR+ F V+ + L
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNIL 350
Query: 306 INMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGF 361
IN + + A + ++M N +++N ++ G ++ L M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 362 SPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALK 421
PD +T ++ ++ + + ++ L N++I +K G A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 422 CF---RLTE-EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACA 477
R + +PD +T++SL+ + G+ ++A + F + G+ P+ V+F ++
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 478 HCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ + + M + P+ YT L++ L G+ EA ELL +
Sbjct: 531 KSRQTDRAIDFLVFMIN-RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 19/326 (5%)
Query: 223 AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYD 281
AVP D++ NVMIS Y C E + ++L + D T++++L S+CD+ +
Sbjct: 168 AVP--DVITYNVMISGY---CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
++ ++ R + DV+ + LI ++ + A + DEM R +VV +N ++
Sbjct: 223 AMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI-SLCGYASAITETLQTHAIAVKLSF 396
G G E +K L DM G P+ +T + + S+C + + + A ++ F
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM-DAEKLLADMLRKGF 340
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATE 452
+ N LI+ + G + A+ + P+ +++ L+H + + ++A E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
E+M+S G PD V++ +L+A G V + N ++S P Y ++D L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGL 459
Query: 513 GRYGLIDEAFELLRSMPV-EVESDTL 537
+ G +A +LL M +++ DT+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTI 485
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 348 EVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLI 407
EV+ +L D +G+ D + LCG A+ E H L + + +++I
Sbjct: 98 EVIDILED---KGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSY----HTVI 150
Query: 408 SAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRV 467
YS C + AL F + + TW ++I A +G+ E+A +MF + + G PD+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 468 SFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRS 527
F V AC G + +GL +F M Y +V + Y ++++L G +DEA + +
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 528 MPVEVESDTLGAFIGSCKLHANIGLAEWAAE 558
M VE + + C + + L + AE
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAE 301
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 8/206 (3%)
Query: 246 EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASAL 305
EA + ++L G D L +C +E + ++ H I D +
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTV 149
Query: 306 INMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDE 365
I MY+ + DA VF+EM RN W T+I G+G + + + EG PD+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDK 209
Query: 366 LTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVAN--SLISAYSKCGNITSALKCF 423
+ C I E L H ++ + LS+ + ++I + CG++ AL
Sbjct: 210 EIFKAVFFACVSIGDINEGL-LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 424 -RLTEEPDLVTWTSLIHAYAFHGQAE 448
R+T EP + W +L++ G E
Sbjct: 269 ERMTVEPSVEMWETLMNLCWVQGYLE 294
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 195/458 (42%), Gaps = 45/458 (9%)
Query: 98 ILSVYLKCKEIEDADKLFDEL------PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
I++ Y++ + + + F+E+ PG N +N ++ V G SS S+F
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNC--FNYLLTFVVG-----SSSFNQWWSFF 152
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
KVV D +F LI C + I L + GF + + L+D K
Sbjct: 153 NENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 212 GLVENARRAFCAVPCRDLV----MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
G +E A+ F + LV V+I+ N + ++ F M+ ++ DG + +T+
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 268 SSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM- 325
+ +++ +C D ++ + R +++ + LI + + +A V D+M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 326 ---LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS-------LC 375
+ N++ +NT+I G G + L L RD+ G SP +T + +S
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE-----PD 430
G A + E + K+++ LI +++ N+ A++ RL+ E PD
Sbjct: 391 GAAKMVKEMEERGIKPSKVTY-------TILIDTFARSDNMEKAIQ-LRLSMEELGLVPD 442
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
+ T++ LIH + GQ +A+ +F+ M+ P+ V + ++ G + L
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
M ++ P+ Y ++++L + EA L+ M
Sbjct: 503 EMEE-KELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 166/372 (44%), Gaps = 23/372 (6%)
Query: 153 RMLLEKVVPDYVTFNGLI-GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
R + + +VP+ V +N +I G C + +G +++ K G D L+ + +
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME-KQGMKPDHLAYNCLIRRFCEL 437
Query: 212 GLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
G +ENA + + + + N++I Y ++ F + + +G + ++
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 268 SSLLS-VCDTLEYYDIGKLAHSLILRQAFDS-----DVLVASALINMYAKNENITDARGV 321
+L++ +C KL + I+++ + V + + LI+ I DA
Sbjct: 498 GTLINCLCKG------SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 322 FDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
EML + N+V +NT+I G G SE LL ++ R+G PD T +S IS G+
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 378 ASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSL 437
A + + + + + L + LIS +K G + ++ +PDL+ + +
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGV 671
Query: 438 IHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
+H YA HG EKA + ++M+ + D+ ++ ++ G + + + M + +
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA-RE 730
Query: 498 IVPDSDHYTCLV 509
+ P++D Y +V
Sbjct: 731 MEPEADTYNIIV 742
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 117/543 (21%), Positives = 215/543 (39%), Gaps = 61/543 (11%)
Query: 37 RLRASVSVPDQTLFRDPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQN 96
+ R +++V L D A++ + K + + +G +L + + + N
Sbjct: 159 QFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYN 218
Query: 97 QILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDN-----------END 141
++ K K + DA++LFDE+ R +++++N +I G N + D
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 142 SSAPLCVSY-------FKRMLLEKV------------VPDYVTFNGLIGSCVQFHNIGVG 182
P +++ FK ++E VPD TF+ L
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDL----VMCNVMISC 238
+ ++ V G ++ + L++ K G +E A + L V+ N MI
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 239 YALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDS 297
Y A + G D ++ L+ C+ E + K + + L+ S
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 298 DVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLK-- 351
V + LI Y + + EM + NVV++ T+I C GS++L+
Sbjct: 459 -VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NC--LCKGSKLLEAQ 514
Query: 352 -LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
+ RDM G SP + I C I + + +K + L N+LI
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 411 SKCGNITSA----LKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
S G ++ A L+ R +PD+ T+ SLI Y F G ++ ++E+M G+ P
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 467 VSFLGVLSACAHCGL-VTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELL 525
++ ++S C G+ +T+ L F M+ + PD Y ++ +G +++AF L
Sbjct: 635 KTYHLLISLCTKEGIELTERL--FGEMS----LKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 526 RSM 528
+ M
Sbjct: 689 KQM 691
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 194/477 (40%), Gaps = 66/477 (13%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLK-CKEIED 110
DP +F +V L E +++ ++ +G + N L+ K C +
Sbjct: 174 DPRVFDVF----FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 111 ADKLFDELPG----RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
A +F E P NV S+NI+I V ++ L + M L+ PD +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL-----MELKGYTPDVISY 284
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC 226
+ ++ +F + +L + G + ++ +++ L + + A AF +
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 227 R----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYD 281
+ D V+ +I + A F + D T+++++S C + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
GKL H + + + D + + LIN Y K ++ DA V + M+ NVV + T+I
Sbjct: 405 AGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G GD +LL +M + G P+ T
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTY----------------------------- 494
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEM 453
NS+++ K GNI A+K E D VT+T+L+ AY G+ +KA E+
Sbjct: 495 ------NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 454 FEKMLSCGVVPDRVSFLGVLSA-CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
++ML G+ P V+F +++ C H G++ G N M + I P++ + LV
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLA-KGIAPNATTFNSLV 603
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
+V++++T++ G +G+ +V KL+ M R+G P+ S I L + E +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFH 444
+ ++ V +LI + K G+I +A K F PD++T+T++I +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
G +A ++F +M G+ PD V+F +++ G + N M P+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 505 YTCLVDLLGRYGLIDEAFELLRSM 528
YT L+D L + G +D A ELL M
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEM 482
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS----VCDTLEYYDIG 283
D++ + +++ Y ++ + + +++ G + + + S++ +C E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE----A 335
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN----VVAWNTIIVG 339
+ A S ++RQ D +V + LI+ + K +I A F EM R+ V+ + II G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
GD E KL +M +G PD +T + I+ A + + + H
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH----------- 444
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
N +I A C P++VT+T+LI G + A E+ +M
Sbjct: 445 ----NHMIQA--GCS--------------PNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
G+ P+ ++ +++ G + + + + + D+ YT L+D + G +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMD 543
Query: 520 EAFELLRSM 528
+A E+L+ M
Sbjct: 544 KAQEILKEM 552
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 194/477 (40%), Gaps = 66/477 (13%)
Query: 52 DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLK-CKEIED 110
DP +F +V L E +++ ++ +G + N L+ K C +
Sbjct: 174 DPRVFDVF----FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 111 ADKLFDELPG----RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTF 166
A +F E P NV S+NI+I V ++ L + M L+ PD +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL-----MELKGYTPDVISY 284
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC 226
+ ++ +F + +L + G + ++ +++ L + + A AF +
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 227 R----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYD 281
+ D V+ +I + A F + D T+++++S C + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 282 IGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTII 337
GKL H + + + D + + LIN Y K ++ DA V + M+ NVV + T+I
Sbjct: 405 AGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 338 VGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQ 397
G GD +LL +M + G P+ T
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTY----------------------------- 494
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEM 453
NS+++ K GNI A+K E D VT+T+L+ AY G+ +KA E+
Sbjct: 495 ------NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 454 FEKMLSCGVVPDRVSFLGVLSA-CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLV 509
++ML G+ P V+F +++ C H G++ G N M + I P++ + LV
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLA-KGIAPNATTFNSLV 603
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
+V++++T++ G +G+ +V KL+ M R+G P+ S I L + E +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFH 444
+ ++ V +LI + K G+I +A K F PD++T+T++I +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 445 GQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDH 504
G +A ++F +M G+ PD V+F +++ G + N M P+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 505 YTCLVDLLGRYGLIDEAFELLRSM 528
YT L+D L + G +D A ELL M
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEM 482
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS----VCDTLEYYDIG 283
D++ + +++ Y ++ + + +++ G + + + S++ +C E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE----A 335
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN----VVAWNTIIVG 339
+ A S ++RQ D +V + LI+ + K +I A F EM R+ V+ + II G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
GD E KL +M +G PD +T + I+ A + + + H
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH----------- 444
Query: 400 LSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLS 459
N +I A C P++VT+T+LI G + A E+ +M
Sbjct: 445 ----NHMIQA--GCS--------------PNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 460 CGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLID 519
G+ P+ ++ +++ G + + + + + D+ YT L+D + G +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMD 543
Query: 520 EAFELLRSM 528
+A E+L+ M
Sbjct: 544 KAQEILKEM 552
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 171/381 (44%), Gaps = 27/381 (7%)
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
V F M+ + P V FN L+ + + + + I L +G D + ++
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 208 YAKCGLVENARRAFCAV------PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN 261
+ + + A + P D+V + +++ Y + +A ++ + + G
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 262 GDEFTFSSLLSVCDTLEYYDIGKLAHSLI---LRQAFDSDVLVASALINMYAKNENITDA 318
D FTF++L+ L ++ A +L+ +++ D++ ++N K +I A
Sbjct: 186 PDTFTFTTLIH---GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 319 RGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS- 373
+ +M + +VV +NTII G Y + L L +M +G PD T SS IS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 374 LCGYAS-AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF----RLTEE 428
LC Y + L + I K++ + ++LI A+ K G + A K + + + +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPN--VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
PD+ T++SLI+ + H + ++A MFE M+S P+ V++ ++ V +G+
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 489 FNLMTSVYQIVPDSDHYTCLV 509
F M S +V ++ YT L+
Sbjct: 421 FREM-SQRGLVGNTVTYTTLI 440
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/481 (20%), Positives = 203/481 (42%), Gaps = 32/481 (6%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVV 124
+R+ L + A ++K G+ + + +L+ Y K I DA L D++ +
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
++ +I G+ + +++ V+ +M+ PD VT+ ++ + +I + +
Sbjct: 190 TFTTLIHGLFLHNKASEA-----VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYA 240
L K + D + ++D K +++A F + + D+ + +ISC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA-----HSLILRQAF 295
+A + + + N + TFS+L+ + GKL + +++++
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDA-----FVKEGKLVEAEKLYDEMIKRSI 359
Query: 296 DSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLK 351
D D+ S+LIN + ++ + +A+ +F+ M+ + NVV ++T+I G E ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 352 LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYS 411
L R+M + G + +T ++ I A V + + N L+
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 412 KCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRV 467
K G + A+ F R T EPD+ T+ +I G+ E E+F + GV P+ +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 468 SFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRS 527
++ ++S G + M + P+S Y L+ R G + + EL++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 528 M 528
M
Sbjct: 599 M 599
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 193/454 (42%), Gaps = 38/454 (8%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRN----VVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++S Y +E+A +L + +PG+ V ++N +I G+ + F
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK-----EVF 328
Query: 152 KRMLLEKVVPDYVTFNGLI------GSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALV 205
ML + PD T+ L+ G V+ + ++ + V DL CF +++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR----SRDVVPDLVCF--SSMM 382
Query: 206 DLYAKCGLVENARRAFCAVP----CRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN 261
L+ + G ++ A F +V D V+ ++I Y + A ++ N + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 262 GDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
D T++++L +C + KL + + R F D + LI+ + K N+ +A
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAME 501
Query: 321 VFDEM---LIR-NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
+F +M IR +VV +NT++ G G GD ++ DM+ + P ++ S ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF-RLTEE---PDLV 432
+ E + + + + + + NS+I Y + GN + ++ E PD +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 433 TWTSLIHAYAFHGQAEKATEMFEKM--LSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
++ +LI+ + KA + +KM G+VPD ++ +L + +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
M + PD YTC+++ + EAF +
Sbjct: 682 KMIE-RGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 157/376 (41%), Gaps = 17/376 (4%)
Query: 167 NGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPC 226
N LIGS V+ + + ++ + G ++ + +V+ K G +E V
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 227 R----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDI 282
+ D+V N +IS Y+ L EEAF + N + G + +T++++++ Y+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 283 GKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVA----WNTIIV 338
K + +LR D +L+ K ++ + VF +M R+VV +++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY--ASAITETLQTHAIAVKLSF 396
G+ + L + G PD + TI + GY I+ + ++
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIY--TILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 397 QEFLSVANSLISAYSKCGNITSALKCF-RLTEE---PDLVTWTSLIHAYAFHGQAEKATE 452
+ N+++ K + A K F +TE PD T T LI + G + A E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
+F+KM + D V++ +L G + + M S +I+P Y+ LV+ L
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNAL 560
Query: 513 GRYGLIDEAFELLRSM 528
G + EAF + M
Sbjct: 561 CSKGHLAEAFRVWDEM 576
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 115/551 (20%), Positives = 219/551 (39%), Gaps = 47/551 (8%)
Query: 70 RAFLPEGKQLHAH-----LIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----G 120
R ++ K AH L GF + N ++ ++ +E A ++ E+ G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 121 RNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIG 180
NV + NIM+ + D ++ ++ + V PD VT+N LI + +
Sbjct: 233 INVYTLNIMVNALC-----KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 181 VGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAV------PCRDLVMCNV 234
+L GF + +++ K G E A+ F + P +
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 235 MISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA 294
M +C + + E +F+ +R D FSS++S+ D + + +
Sbjct: 348 MEACKKGDVVETE--KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVL 350
D ++ + LI Y + I+ A + +EML + +VV +NTI+ G E
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 351 KLLRDMLREGFSPDELTISSTI----SLCGYASAITETLQTHAIAVKLSFQEFLSVANSL 406
KL +M PD T++ I L +A+ + ++L + N+L
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY----NTL 521
Query: 407 ISAYSKCGNITSALKCF--RLTEE--PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGV 462
+ + K G+I +A + + +++E P ++++ L++A G +A ++++M+S +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 463 VPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
P + ++ G + G + M S VPD Y L+ R + +AF
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 523 ELLRSMPVEVESDTLGAFIGSCKLHA-----NIGLAEWAAEKLFI--IEPEKSVNYAAMS 575
L++ M E F + LH + AE K+ + P++S Y M
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST-YTCMI 699
Query: 576 NIYASQRDWCD 586
N + SQ + +
Sbjct: 700 NGFVSQDNLTE 710
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 167/413 (40%), Gaps = 31/413 (7%)
Query: 75 EGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVS----WNIMI 130
K++ A +++ G + +L K ++ + +K+F ++ R+VV ++ M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 131 RGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTV 190
N + + + YF + ++PD V + LI + I V + L +
Sbjct: 383 SLFTRSGNLDKA-----LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 191 KVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPE 246
+ G +D ++ K ++ A + F + R D ++I + +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 247 EAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALI 306
A +F ++ D T+++LL + D K + ++ + + S L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 307 NMYAKNENITDARGVFDEMLIRN----VVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFS 362
N ++ +A V+DEM+ +N V+ N++I G G+ S+ L M+ EGF
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 363 PDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA------NSLISAYSKCGNI 416
PD ++ ++ I Y E + VK +E + NS++ + + +
Sbjct: 618 PDCISYNTLI----YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 417 TSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
A R E PD T+T +I+ + +A + ++ML G PD
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 155/378 (41%), Gaps = 33/378 (8%)
Query: 35 WSRLRASVSVPDQTLFRDPDTVHLFCANALKV-----SAKRAFLPEGKQLHAHLIKFGFC 89
+S +R+ VPD F ++ N K S K A L ++ LI+ G+C
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ-GYC 421
Query: 90 HVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
+ ++SV + + +++ + +VV++N ++ G+ R ++
Sbjct: 422 -----RKGMISVAMNLR-----NEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD-----K 466
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
F M + PD T LI + N+ ++L + LD L+D +
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 210 KCGLVENARRAFCAVPCRDL----VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF 265
K G ++ A+ + + +++ + +++++ EAF +++ +
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 266 TFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE 324
+S++ C + D G+ ++ + F D + + LI + + EN++ A G+ +
Sbjct: 587 ICNSMIKGYCRSGNASD-GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 325 M------LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYA 378
M L+ +V +N+I+ G E +LR M+ G +PD T + I+
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 379 SAITETLQTHAIAVKLSF 396
+TE + H ++ F
Sbjct: 706 DNLTEAFRIHDEMLQRGF 723
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 299 VLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKL-L 353
V V +A++ +Y+++ + A+ + D M R +++++NT+I G + L + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 354 RDMLRE-GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSK 412
DM+R G PD +T ++ +S C S + ++ Q L N++IS Y +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 413 CGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVS 468
CG A + F E PD VT+ SL++A+A EK E++++M G D ++
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 469 FLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ ++ G + L + M + PD+ YT L+D LG+ EA L+ M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 150/354 (42%), Gaps = 23/354 (6%)
Query: 203 ALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCY--ALNCLPEEAFSMFNLLR 256
A++ +Y++ G A+ A+ R DL+ N +I+ + P A + +++R
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
G D T+++LLS C D + D+ +A+I++Y +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 317 DARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
+A +F E+ ++ + V +N+++ + +V ++ + M + GF DE+T ++ I
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 373 SLCGYASAITETLQTHAIAVKLSFQEFLSVANS-LISAYSKCGNITSAL----KCFRLTE 427
+ G + LQ + LS + ++ + LI + K A + +
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+P L T+++LI YA G+ E+A + F ML G PD +++ +L K
Sbjct: 470 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM-------PVEVES 534
+ M S P Y ++ L + D+ + +R M P+E+ S
Sbjct: 530 LYRDMISDGH-TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISS 582
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 16/287 (5%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++ VY + + A +L D + R +++S+N +I R + L V
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA---RLKSGGLTPNLAVELL 285
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
+ + PD +T+N L+ +C + N+ +++ D + A++ +Y +C
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 212 GLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
GL A R F + + D V N ++ +A E+ ++ ++ G DE T+
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 268 SSLLSVCDTLEYYDIG-KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEML 326
++++ + D+ +L + + D + + LI+ K +A + EML
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 327 ---IRNVV-AWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS 369
I+ + ++ +I G G E MLR G PD L S
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 168/401 (41%), Gaps = 46/401 (11%)
Query: 142 SSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVG 201
S +S +M+ P VTF L+ + IG L VK G++ + V
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 202 CALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN 261
L+D GL +N LN A + N + G
Sbjct: 180 NTLID-----GLCKNGE----------------------LNI----ALELLNEMEKKGLG 208
Query: 262 GDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARG 320
D T+++LL+ +C + + D ++ + ++++ + DV+ +ALI+++ K N+ +A+
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDM-MKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 321 VFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
++ EM+ +V V +N+II G +G + K M +G P+ +T ++ IS
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF------RLTEEPD 430
+ E ++ F + N+LI Y + G + AL F R+T PD
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT--PD 385
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
++T L+H +G+ E A F+ M V++ ++ V K F
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+ V + PD+ YT ++ L + G EA EL+R M E
Sbjct: 446 RL-PVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 11/283 (3%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIGKLA 286
DL ++I C+ A S+ + G TF SLL C D L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGN 342
L+++ ++ +V+V + LI+ KN + A + +EM L +VV +NT++ G
Sbjct: 165 -ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSV 402
G S+ ++LRDM++ +PD +T ++ I + + E + + ++ S
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 403 ANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
NS+I+ G + A K F L P++VT+ +LI + ++ ++F++M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPD 501
G D ++ ++ G + L F M S ++ PD
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS-RRVTPD 385
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEML----IRNVVAWNTIIVGCGNYGD 345
+L+ ++ D + +L+N + + ++DA + D+M+ ++VA+N II
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 346 GSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANS 405
++ +++ R+G P+ +T ++ ++ +S ++ + + +K + ++
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 406 LISAYSKCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCG 461
L+ A+ K G + A + F R++ +PD+VT++SLI+ H + ++A +MF+ M+S G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 462 VVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEA 521
+ D VS+ +++ V G+ F M S +V ++ Y L+ + G +D+A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 522 FELLRSM 528
E M
Sbjct: 385 QEFFSQM 391
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 191/451 (42%), Gaps = 51/451 (11%)
Query: 94 LQNQILSVYLKCKEIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
L+ ++ L+ ++ DA LF ++ P ++V +N ++ + + + +S
Sbjct: 52 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD-----VVIS 106
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
K+M + + D TFN +I + + + + +K+G++ D +LV+ +
Sbjct: 107 LGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFC 166
Query: 210 KCGLVENARR---AFCAVPCR-DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF 265
+ V +A + + D+V N +I +AF F + G +
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 226
Query: 266 TFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDE 324
T+++L++ +C++ + D +L +I ++ +V+ SAL++ + KN + +A+ +F+E
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMI-KKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 325 MLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET 384
M+ R PD +T SS I+ I E
Sbjct: 286 MV-------------------------------RMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 385 LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLV----TWTSLIHA 440
Q + V + N+LI+ + K + +K FR + LV T+ +LI
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 441 YAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVP 500
+ G +KA E F +M G+ PD ++ +L G + K L F M ++
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK-REMDL 433
Query: 501 DSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
D YT ++ + + G ++EA+ L S+ ++
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 156/359 (43%), Gaps = 29/359 (8%)
Query: 146 LCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALV 205
L +S +ML PD VT L+ + + + + L V++G+ D A++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 206 DLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPE-----EAFSMFNLLRMDGA 260
D K V +A F + R + NV+ +N L +A + + +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 261 NGDEFTFSSLLSVCDTLEYYDIGKLAHSL-----ILRQAFDSDVLVASALINMYAKNENI 315
+ T+S+LL + GK+ + ++R + D D++ S+LIN ++ I
Sbjct: 257 TPNVITYSALLDA-----FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 316 TDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
+A +FD M+ + +VV++NT+I G + +KL R+M + G + +T ++
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEP-- 429
I A + + + + + N L+ G + AL F ++
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 430 --DLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
D+VT+T++I G+ E+A +F + G+ PD V++ ++S GL TKGL
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS-----GLCTKGL 485
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 154/403 (38%), Gaps = 60/403 (14%)
Query: 81 AHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVAGR 136
++K G+ +++ + + + DA L D++ ++V++N +I +
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 137 DNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDL 196
ND+ +FK + + + P+ VT+ L+ +L +K
Sbjct: 204 KRVNDA-----FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 197 DCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLR 256
+ AL+D + K G V A+ F EE M
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELF------------------------EEMVRM----- 289
Query: 257 MDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENIT 316
+ D T+SSL++ + D L++ + +DV+ + LIN + K + +
Sbjct: 290 --SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 317 DARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTI 372
D +F EM L+ N V +NT+I G GD + + M G SPD T + +
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 373 S-LCG-----YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLT 426
LC A I E +Q + + + ++I K G + A F
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIV------TYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 427 E----EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
+PD+VT+T+++ G + ++ KM G++ +
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 156/387 (40%), Gaps = 65/387 (16%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVV 124
+R + + L +++ G+ + N I+ K K + DA F E+ + NVV
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 226
Query: 125 SWNIMIRGVAGRDNENDSS-----------APLCVSY-------------------FKRM 154
++ ++ G+ +D++ P ++Y F+ M
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 155 LLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLV 214
+ + PD VT++ LI I Q+ V G D L++ + K V
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 215 ENARRAFCAVPCRDLV----MCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSL 270
E+ + F + R LV N +I + ++A F+ + G + D +T++ L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 271 LS-VCDTLEYYDIGKLAHSLIL-----RQAFDSDVLVASALINMYAKNENITDARGVFDE 324
L +CD G+L +L++ ++ D D++ + +I K + +A +F
Sbjct: 407 LGGLCDN------GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 325 MLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTIS-STISL----- 374
+ ++ ++V + T++ G G EV L M +EG ++ T+S I+L
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELI 520
Query: 375 -----CGYASAITETLQTHAIAVKLSF 396
CGYA ++ + +++ LS
Sbjct: 521 KKMLSCGYAPSLLKDIKSGVCKKALSL 547
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 44/282 (15%)
Query: 290 ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRN----VVAWNTIIVGCGNYGD 345
IL F +V V + L+N + K NI+DA+ VFDE+ R+ VV++NT+I G G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 346 GSEVLKLLRDMLREGFSPDELTISSTIS-----------------LCGYASAITETLQTH 388
E +L M + PD T S+ I+ +C + + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 389 AI----------AVKLSFQEFLS--------VANSLISAYSKCGNITSALKC----FRLT 426
I +K S+Q+ LS + N+L++ + K G++ +A R
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 427 EEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGL 486
PD +T+T+LI + G E A E+ ++M G+ DRV F ++ G V
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 487 HYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
M I PD YT ++D + G F+LL+ M
Sbjct: 471 RALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 158/355 (44%), Gaps = 15/355 (4%)
Query: 169 LIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRD 228
L+ ++ + G + + GF L+ +V L++ + K G + +A++ F + R
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 229 L----VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIG 283
L V N +I+ Y +E F + + + D FT+S+L+ ++C +
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 284 KLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVG 339
L + R +DV+ + LI+ +++N I + + +ML + ++V +NT++ G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTT-LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEF 399
GD ++ M+R G PD++T ++ I + L+ + +
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 400 LSVANSLISAYSKCGNITSALKCFR----LTEEPDLVTWTSLIHAYAFHGQAEKATEMFE 455
++L+ K G + A + R +PD VT+T ++ A+ G A+ ++ +
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 456 KMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVD 510
+M S G VP V++ +L+ G + + M ++ +VPD Y L++
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI-GVVPDDITYNTLLE 563
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 149/370 (40%), Gaps = 60/370 (16%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
NV +NI++ N +D+ F + + P V+FN LI + N+
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQ-----KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
G +L K D F AL++ K ++ A F + R L+ +V+ +
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT--- 350
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
L+ NG+ D+ K ++ +L + D+++
Sbjct: 351 ------------LIHGHSRNGE----------------IDLMKESYQKMLSKGLQPDIVL 382
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDML 357
+ L+N + KN ++ AR + D M+ R + + + T+I G GD L++ ++M
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 358 REGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA--------NSLISA 409
+ G D + S+ + CG + I + + +E L ++ A
Sbjct: 443 QNGIELDRVGFSALV--CGMCK------EGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 410 YSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPD 465
+ K G+ + K + + P +VT+ L++ GQ + A + + ML+ GVVPD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 466 RVSFLGVLSA 475
+++ +L
Sbjct: 555 DITYNTLLEG 564
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 68/458 (14%)
Query: 92 LSLQNQILSVYLKCKEIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNENDSSAPLC 147
+S + ++ S + KE +DA LF E+ P ++ ++ + VA R + D LC
Sbjct: 38 VSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVA-RTKQYDLVLDLC 95
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
K+M L+ + + T + +I C + + + +K+G++ D L++
Sbjct: 96 ----KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 208 YAKCGLVENA----RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGD 263
G V A R L+ N +++ LN +A + + + G +
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 264 EFTFSSLLSV-CDTLEYYDIGKLAHSLILRQAFDS-----DVLVASALINMYAKNENITD 317
E T+ +L V C + G+ A ++ L + + D + S +I+ K+ ++ +
Sbjct: 212 EVTYGPVLKVMCKS------GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 318 ARGVFDEMLIR----NVVAWNTIIVG---CGNYGDGSEVLKLLRDMLREGFSPDELTISS 370
A +F+EM I+ +++ + T+I G G + DG+ KLLRDM++ +PD + S+
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA---KLLRDMIKRKITPDVVAFSA 322
Query: 371 TISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD 430
I + E + H K Q +S PD
Sbjct: 323 LIDCFVKEGKLREAEELH----KEMIQRGIS---------------------------PD 351
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
VT+TSLI + Q +KA M + M+S G P+ +F +++ L+ GL F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
M S+ +V D+ Y L+ G ++ A EL + M
Sbjct: 412 KM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 152/381 (39%), Gaps = 62/381 (16%)
Query: 105 CKE--IEDADKLFDELPGR----NVVSWNIMIRGV--AGRDNENDSSAPLCVSYFKRMLL 156
CK+ +++A LF+E+ + +++ + +IRG AGR D A L KR
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR---WDDGAKLLRDMIKR--- 311
Query: 157 EKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVEN 216
K+ PD V F+ LI V+ + +LH ++ G D +L+D + K ++
Sbjct: 312 -KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 217 ARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS 272
A + + ++ N++I+ Y L ++ +F + + G D T+++L+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 273 VCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIR 328
L ++ K ++ + D++ L++ N A +F+++ +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 329 NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTH 388
++ +N II G N + L + +G PD
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD------------------------ 526
Query: 389 AIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFH 444
+ N +I K G+++ A FR EE P+ T+ LI A+
Sbjct: 527 -----------VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 445 GQAEKATEMFEKMLSCGVVPD 465
G A K+ ++ E++ CG D
Sbjct: 576 GDATKSAKLIEEIKRCGFSVD 596
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLIS 408
VL L + M +G + + T+S I+ C ++ +KL ++ ++LI+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 409 AYSKCGNITSALKCF-RLTE---EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
G ++ AL+ R+ E +P L+T +L++ +G+ A + ++M+ G P
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 465 DRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFEL 524
+ V++ VL G + M +I D+ Y+ ++D L + G +D AF L
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEE-RKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 525 LRSMPVE 531
M ++
Sbjct: 270 FNEMEIK 276
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 54/319 (16%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP----GRNVV 124
K L E ++LH +I+ G ++ + K +++ A+ + D + G N+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
++NI+I G + +D + F++M L VV D VT+N LI
Sbjct: 389 TFNILINGYCKANLIDDG-----LELFRKMSLRGVVADTVTYNTLIQ------------- 430
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYA 240
GF C L G +E A+ F + R D+V +++
Sbjct: 431 --------GF-------CEL-------GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDV 299
N PE+A +F + D ++ ++ +C+ + D L SL L+ DV
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDV 527
Query: 300 LVASALINMYAKNENITDARGVFDEML----IRNVVAWNTIIVGCGNYGDGSEVLKLLRD 355
+ +I K ++++A +F +M N +N +I GD ++ KL+ +
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 356 MLREGFSPDELTISSTISL 374
+ R GFS D T+ + +
Sbjct: 588 IKRCGFSVDASTVKMVVDM 606
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 182/400 (45%), Gaps = 27/400 (6%)
Query: 148 VSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDL 207
V+ F M+ + P + F+ L+ + + + V I L +G + + L++
Sbjct: 66 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 208 YAKCGLVENARRAFCAV------PCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGAN 261
+ + + A + P ++V + +++ Y + EA ++ + + + G
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEP--NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 262 GDEFTFSSLLSVCDTLEYYDIGKLAHSLILR---QAFDSDVLVASALINMYAKNENITDA 318
+ TF++L+ L ++ A +LI R + D++ ++N K + A
Sbjct: 184 PNTVTFNTLIH---GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 319 RGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTIS- 373
+ ++M L V+ +NTII G Y + L L ++M +G P+ +T SS IS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 374 LCGYAS-AITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF----RLTEE 428
LC Y + L + I K++ F ++LI A+ K G + A K + + + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVF--TFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 429 PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHY 488
P +VT++SLI+ + H + ++A +MFE M+S PD V++ ++ V +G+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 489 FNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
F M S +V ++ Y L+ L + G D A E+ + M
Sbjct: 419 FREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 203/459 (44%), Gaps = 26/459 (5%)
Query: 107 EIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPD 162
+++DA LF E+ P +++ ++ ++ +A + N+ D + +S ++M + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA-KMNKFD----VVISLGEQMQNLGIPHN 115
Query: 163 YVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENA----R 218
+ T++ LI + + + + + +K+G++ + +L++ Y + A
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 219 RAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLE 278
+ F + V N +I L+ EA ++ + + G D T+ +++
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 279 YYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWN 334
D+ + + + + VL+ + +I+ K +++ DA +F EM + NVV ++
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 335 TIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKL 394
++I NYG S+ +LL DM+ +PD T S+ I + E + + VK
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 395 SFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKA 450
S + +SLI+ + + A + F PD+VT+ +LI + + + E+
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 451 TEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVD 510
E+F +M G+V + V++ ++ G F M S + P+ Y L+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLD 474
Query: 511 LLGRYGLIDEA---FELLRSMPVEVESDTLGAFI-GSCK 545
L + G +++A FE L+ +E T I G CK
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/522 (20%), Positives = 213/522 (40%), Gaps = 62/522 (11%)
Query: 69 KRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDEL------PGRN 122
+R+ LP + ++K G+ + + +L+ Y K I +A L D++ P N
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP--N 185
Query: 123 VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVG 182
V++N +I G+ + +++ A + RM+ + PD VT+ ++ + + +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALI-----DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 183 IQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALN 242
L + + + ++D C D
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIID-------------GLCKYKHMD-------------- 273
Query: 243 CLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHSLILRQAFDSDVLV 301
+A ++F + G + T+SSL+S +C+ + D +L +I R+ + DV
Sbjct: 274 ----DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFT 328
Query: 302 ASALINMYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDML 357
SALI+ + K + +A ++DEM+ R++ V ++++I G + E ++ M+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 358 REGFSPDELTISSTI-SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
+ PD +T ++ I C Y + E ++ + N LI + G+
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKR-VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 417 TSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGV 472
A + F+ P+++T+ +L+ +G+ EKA +FE + + P ++ +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 473 LSACAHCGLVTKGLHYF-NLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVE 531
+ G V G F NL S+ + PD Y ++ R G +EA L + M +
Sbjct: 508 IEGMCKAGKVEDGWDLFCNL--SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 532 VESDTLGAFIGSCKLHANIGLAEWAAEKLFIIEPEKSVNYAA 573
G + + G E +AE +I+ +S +A
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAE---LIKEMRSCGFAG 604
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 129/285 (45%), Gaps = 21/285 (7%)
Query: 98 ILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKR 153
++ ++K ++ +A+KL+DE+ R ++V+++ +I G D +++ F+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK-----QMFEF 386
Query: 154 MLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGL 213
M+ + PD VT+N LI ++ + G+++ + G + L+ + G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 214 VENARRAFC-----AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFS 268
+ A+ F VP +++ N ++ N E+A +F L+ +T++
Sbjct: 447 CDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 269 SLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM-- 325
++ +C + D L +L L+ DV+ + +I+ + + + +A +F EM
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 326 --LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
+ N +NT+I GD +L+++M GF+ D TI
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 199/484 (41%), Gaps = 79/484 (16%)
Query: 91 VLSLQNQ-----------ILSVYLKCKEIEDADKLFDELPGRNVV----SWNIMIRGV-- 133
V+ +QNQ +L + ++ IE A+ +FDE+ R VV S+ +M+ G
Sbjct: 170 VMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFR 229
Query: 134 AGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVG 193
G+ E D + M+ +PD T ++ + + + I + +G
Sbjct: 230 DGKIQEADR-------WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 194 FDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFN 253
F + +L+D K G ++ +AF M
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIK-------------------------------QAFEMLE 311
Query: 254 LLRMDGANGDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKN 312
+ +G + +T ++L+ +C +L L+ + +V +++I Y K
Sbjct: 312 EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371
Query: 313 ENITDARGVFDEM----LIRNVVAWNTIIVG---CGNYGDGSEVLKLLRDMLREGFSPDE 365
+ + A +F M L NV + T+I G G++G E++ L+ D EGF P+
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD---EGFMPNI 428
Query: 366 LTISSTI-SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF- 423
T ++ I SLC + A E + A + LI K +I AL F
Sbjct: 429 YTYNAAIDSLCKKSRA-PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 424 RLTE---EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCG 480
R+ + E D+ LI A+ + +++ +F+ ++S G++P + ++ ++S G
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 481 LVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM------PVEVES 534
+ L YF+ M + VPDS Y L+ L + ++DEA +L +M P EV
Sbjct: 548 DIDLALKYFHNMKR-HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606
Query: 535 DTLG 538
TL
Sbjct: 607 VTLA 610
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 344 GDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA 403
G +E + ++ DM +G +P +T++ + IAV+L E+ A
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLE----------------IAVELGLIEY---A 201
Query: 404 NSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVV 463
++ S G + PD ++ ++ G+ ++A M+ G +
Sbjct: 202 ENVFDEMSVRGVV------------PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI 249
Query: 464 PDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
PD + +L+A GLV + + YF M + P+ ++T L+D L + G I +AFE
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 524 LLRSM 528
+L M
Sbjct: 309 MLEEM 313
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAH 287
D + + +I+C L +A F + G DE T+S++L V Y GK+
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV-----YSKSGKVEE 274
Query: 288 SLILRQ-----AFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIV 338
L L + + D + S L M+ + + R V EM + NVV +NT++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQT-HAIAVKLSFQ 397
G G L +ML G +P+E T+++ + + G A + LQ + K
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPM 394
Query: 398 EFLSVANSLISAYSKCGNITSALKCFRLTEE-----PDLVTWTSLIHAYAFHGQAEKATE 452
+F+ + N+L++ + G A + F +E PD ++T++++ Y G+AEKA E
Sbjct: 395 DFI-LYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453
Query: 453 MFEKMLSCGV 462
+FE+ML GV
Sbjct: 454 LFEEMLKAGV 463
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 12/239 (5%)
Query: 297 SDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
S ++ + N+Y N+ I ++ L+ + V ++ I+ G EVL L
Sbjct: 225 STIITCAKRCNLY--NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 357 LREGFSPDELTISSTISLCGYAS---AITETLQTHAIAVKLSFQEFLSVANSLISAYSKC 413
+ G+ PD + S + G A I LQ + + + V N+L+ A +
Sbjct: 283 VATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK---SMDVKPNVVVYNTLLEAMGRA 339
Query: 414 GNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
G A F E P+ T T+L+ Y A A +++E+M + D + +
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+L+ CA GL + FN M Q PD+ YT ++++ G G ++A EL M
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 140/335 (41%), Gaps = 15/335 (4%)
Query: 147 CVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVD 206
+ +F+RM ++PD VT++ ++ + + + L+ V G+ D L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 207 LYAKCGLVENARRAFCAVPCRD----LVMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
++ + G + R + D +V+ N ++ P A S+FN + G
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 263 DEFTFSSLLSVCDTLEY-YDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGV 321
+E T ++L+ + + D +L + ++ + D ++ + L+NM A +A +
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKK-WPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 322 FDEMLIR-----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCG 376
F++M + ++ ++ G+ G + ++L +ML+ G + + + + G
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 478
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD--LVTW 434
A I + + +++K + + L+S + C + A K E + LVT+
Sbjct: 479 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 538
Query: 435 TSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
+LI + E E F+ +++ V R F
Sbjct: 539 VNLI--VDEKTEYETVKEEFKLVINATQVEARRPF 571
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 27/416 (6%)
Query: 155 LLEKVV-----PDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
LLE +V PD + LI NI +++ K G D F AL++ +
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 210 KCGLVENARRAFCAVPCRDL----VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF 265
K +++A R + +D V N+MI + A + N L D
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 266 TFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM 325
T++ L+ D +L + D+ + +I K + A + +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 326 LIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAI 381
++ +V+++N ++ N G E KL+ M E P+ +T S I+ I
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 382 TETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSL 437
E + + + + LI+A+ + G + A++ PD+V + ++
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 438 IHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQ 497
+ +G+A++A E+F K+ G P+ S+ + SA G + LH M S
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NG 468
Query: 498 IVPDSDHYTCLVDLLGRYGLIDEAFELLRSM------PVEVESDTLGAFIGSCKLH 547
I PD Y ++ L R G++DEAFELL M P V + + +G CK H
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV--LLGFCKAH 522
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/464 (19%), Positives = 173/464 (37%), Gaps = 68/464 (14%)
Query: 47 QTLFR---DPDTVHLFCANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYL 103
+T+ R +PD + C +K +P+ ++ L KFG V + N +++ +
Sbjct: 113 ETMVRKGYNPDVI--LCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAY-NALINGFC 169
Query: 104 KCKEIEDADKLFDELPGRN----VVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV 159
K I+DA ++ D + ++ V++NIMI + R L + ++L +
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR-----GKLDLALKVLNQLLSDNC 224
Query: 160 VPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR 219
P +T+ LI + + + ++L + G D F ++ K G+V+ R
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD---R 281
Query: 220 AFCAVPCRDLVMC------------------------NVMISCYALNCLP---------- 245
AF V +L C +M ++ C P
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 246 --------EEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
EEA ++ L++ G D +++ L++ D+ ++
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 298 DVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLL 353
D++ + ++ KN A +F ++ N ++NT+ + GD L ++
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 354 RDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKC 413
+M+ G PDE+T +S IS + E + F + N ++ + K
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 414 GNITSALKCFRLTE----EPDLVTWTSLIHAYAFHGQAEKATEM 453
I A+ P+ T+T LI F G +A E+
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 341 GNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFL 400
GNY E L LL M+R+G++PD + + I I + ++ I K Q +
Sbjct: 103 GNY---IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 401 SVANSLISAYSKCGNITSALKCF-RLTEE---PDLVTWTSLIHAYAFHGQAEKATEMFEK 456
N+LI+ + K I A + R+ + PD VT+ +I + G+ + A ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
+LS P +++ ++ A G V + L + M S + PD Y ++ + + G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGMCKEG 277
Query: 517 LIDEAFELLRSMPVE-VESDTLGAFIGSCKLHANIGLAEW-AAEKLF 561
++D AFE++R++ ++ E D + I L A + +W EKL
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNI---LLRALLNQGKWEEGEKLM 321
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 209/554 (37%), Gaps = 99/554 (17%)
Query: 60 CANALKVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELP 119
C L AK + K+ +I G + N ++ K ++E A LF+E+
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 120 GR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQ 175
R + V++N MI G +D+ V +F+ M PD +T+N LI +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDT-----VCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 176 FHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVM 235
F + +G++ + G + LVD + K G+++ A + +
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD------------ 392
Query: 236 ISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSV-CDTLEYYDIGKLAHSLILRQA 294
+R G +E+T++SL+ C D +L + + L+
Sbjct: 393 -------------------MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-LQVG 432
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVL 350
+ +V+ +ALI+ E + +A +F +M +I N+ ++N +I G + L
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 351 KLLRDMLREGFSPDELTISSTI-SLCGYASAITETLQTHAIAVKLSFQEFLSVANSLI-- 407
+LL ++ G PD L + I LC E ++ + + +E ANSLI
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSL-----EKIEAAKVVMN-EMKECGIKANSLIYT 546
Query: 408 ---SAYSKCGNITSALKCFRLTEEPDL--------------------------------- 431
AY K GN T L +E D+
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 432 -------VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTK 484
+T++I Q E AT +FE+M+ G+VPDR ++ ++ G V +
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSC 544
L + M + + D YT LV L + +A L M E I
Sbjct: 667 ALALRDKMAEIGMKL-DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Query: 545 KLHANIGLAEWAAE 558
K H +G + A E
Sbjct: 726 KKHYELGCIDEAVE 739
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 173/425 (40%), Gaps = 24/425 (5%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
N+ ++NIMI + R S ++ +M+ P VT N L+ + I
Sbjct: 99 NLYTYNIMINCLCRR-----SQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 182 GIQLHCYTVKVGFDLDCFVGCALV-------DLYAKCGLVENARRAFCAVPCRDLVMCNV 234
+ L V++G+ D LV LVE C DLV
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---PDLVTYGA 210
Query: 235 MISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQA 294
+I+ P+ A ++ N + D +S+++ + D + + +
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 295 FDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVL 350
DV S+LI+ +DA + +ML R NVV +N++I G E
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 351 KLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAY 410
KL +M++ P+ +T +S I+ + E Q + V + N+LI+ +
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 411 SKCGNITSALKCFRLTEEPDLV----TWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDR 466
K + ++ FR LV T+T+LIH + + A +F++M+S GV P+
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 467 VSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLR 526
+++ +L G + K + F + ++ PD Y + + + + G +++ ++L
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 527 SMPVE 531
S+ ++
Sbjct: 510 SLSLK 514
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 168/413 (40%), Gaps = 19/413 (4%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
++V++ +I G+ R + L ++ +M K+ D V ++ +I S ++ ++
Sbjct: 204 DLVTYGAVINGLCKRGEPD-----LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 182 GIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMIS 237
+ L G D F +L+ G +A R + R ++V N +I
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 238 CYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDS 297
+A EA +F+ + + + T++SL++ + D + +L++ +
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 298 DVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLL 353
DV+ + LIN + K + + D +F +M L+ N V + T+I G D +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 354 RDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKC 413
+ M+ +G P+ +T ++ + + + + K + + N + K
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 414 GNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
G + F +PD++ + ++I + G E+A +F KM G +PD ++
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 470 LGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAF 522
++ A G M S + D+ Y + D+L G +D+ F
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSC-RFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGR----NVVSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N +++ + K K++ D +LF ++ R N V++ +I G + +++ F
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM-----VF 438
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
K+M+ + V P+ +T+N L+ + + + + Y K + D + + + K
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 212 GLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTF 267
G VE+ FC++ + D++ N MIS + L EEA+++F ++ DG D T+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 268 SSLL 271
++L+
Sbjct: 559 NTLI 562
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 8/267 (2%)
Query: 204 LVDLYAKCGLVENARRAFCAVPCRDL-VMCNVMISCYALNCLPEEAFSMFNLLRMDGANG 262
L+ ++ CG ++ R+ F +P RD V + C + + AF ++L+
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 263 ---DEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAF--DSDVLVASALINMYAKNENITD 317
+ +L C + +++GK H+L + F + D ++ +LI Y + + D
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 318 ARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY 377
A V ++ N VAW + G+ EV++ +M G + S+ + C +
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 378 ASAITET-LQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVT-WT 435
S + Q HA A+KL F+ + LI Y K G + A K F+ +++ V+ W
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 436 SLIHAYAFHGQAEKATEMFEKMLSCGV 462
+++ +Y +G +A ++ +M + G+
Sbjct: 369 AMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 7/301 (2%)
Query: 65 KVSAKRAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVV 124
K SA+ +L H++K ++ N++L +++ C ++ ++FD +P R+
Sbjct: 96 KESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFH 155
Query: 125 SWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKV-VPDYVTFNGLIGSCVQFHNIGVGI 183
SW I+ G + D +A L VS K +P ++ ++ +C + +G
Sbjct: 156 SWAIVFLGCIEMGDYED-AAFLFVSMLKHSQKGAFKIPSWI-LGCVLKACAMIRDFELGK 213
Query: 184 QLHCYTVKVGF--DLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYAL 241
Q+H K+GF + D ++ +L+ Y + +E+A + + V ++
Sbjct: 214 QVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYR 273
Query: 242 NCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTL-EYYDIGKLAHSLILRQAFDSDVL 300
+E F + G + FS++L C + + G+ H+ ++ F+SD L
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCL 333
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNVVA-WNTIIVGCGNYGDGSEVLKLLRDMLRE 359
+ LI MY K + DA VF V+ WN ++ G E +KLL M
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKAT 393
Query: 360 G 360
G
Sbjct: 394 G 394
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 13/269 (4%)
Query: 286 AHSL---ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGN 342
AH L I++ + + + L+ M+ + R +FD M R+ +W + +GC
Sbjct: 107 AHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIE 166
Query: 343 YGDGSEVLKLLRDMLRE----GFSPDELTISSTISLCGYASAITETLQTHAIAVKLSF-- 396
GD + L ML+ F + + C Q HA+ KL F
Sbjct: 167 MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFID 226
Query: 397 QEFLSVANSLISAYSKCGNITSALKCFRLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEK 456
+E ++ SLI Y + + A + V W + + G+ ++ F +
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSD-HYTC-LVDLLGR 514
M + G+ + F VL AC+ + G + + ++ +SD C L+++ G+
Sbjct: 287 MGNHGIKKNVSVFSNVLKACS--WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 515 YGLIDEAFELLRSMPVEVESDTLGAFIGS 543
YG + +A ++ +S E A + S
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 203/477 (42%), Gaps = 41/477 (8%)
Query: 94 LQNQILSVYLKCKEIEDADKLFDEL----PGRNVVSWNIMIRGVAGRDNENDSSAPLCVS 149
L+N I+ + ++ DA LF+ + P + +N + VA R + D L +
Sbjct: 42 LRNGIVDI-----KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVA-RTKQYD----LVLG 91
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
+ K M L + D T +I + + + K+G++ D LV+ +
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 210 KCGLVENA----RRAFCAVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEF 265
G V A R DLV + +I+ L EA + + + G DE
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 266 TFSSLLS-VCDTLEYYDIGKLAHSLILRQAFD-----SDVLVASALINMYAKNENITDAR 319
T+ +L+ +C + G A +L L + + + V+ S +I+ K+ + DA
Sbjct: 212 TYGPVLNRLCKS------GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 320 GVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLC 375
+F+EM ++ +VV ++++I G N G + K+LR+M+ PD +T S+ I +
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 376 GYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTE----EPDL 431
+ E + + + NSLI + K + A + F L EPD+
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 432 VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNL 491
VT++ LI++Y + + +F ++ S G++P+ +++ ++ G + F
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 492 MTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESDTLGAFIGSCKLHA 548
M S + P Y L+D L G +++A E+ M + TLG I + +H
Sbjct: 446 MVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKM--QKSRMTLGIGIYNIIIHG 499
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 160/417 (38%), Gaps = 58/417 (13%)
Query: 70 RAFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRN----VVS 125
+ + E L ++++GF +L+ K A LF ++ RN VV
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 126 WNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQL 185
++I+I + D S +S F M ++ + D VT++ LIG G ++
Sbjct: 248 YSIVIDSLC-----KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 186 HCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCY-A 240
+ D AL+D++ K G + A+ + + R D + N +I +
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 241 LNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
NCL EA MF+L+ G + D++
Sbjct: 363 ENCL-HEANQMFDLMVSKGC-----------------------------------EPDIV 386
Query: 301 VASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDM 356
S LIN Y K + + D +F E+ LI N + +NT+++G G + +L ++M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNI 416
+ G P +T + + + L+ K + + N +I +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 417 TSALKCF-RLTEE---PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSF 469
A F L+++ PD+VT+ +I G +A +F KM G PD ++
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 185/472 (39%), Gaps = 65/472 (13%)
Query: 52 DPDTVHLFCANALKVSAKRAF-LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIED 110
PD + C N L + + F E + L+ L++ + ++ Y IE
Sbjct: 174 QPDVI---CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 111 ADKLFDELPGRNV-------VSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDY 163
A+ + E+ +V +N I G+ R + + + F+RM ++ P
Sbjct: 231 AEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA----IDVFQRMKRDRCKPTT 286
Query: 164 VTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCA 223
T+N +++LY K + + +C
Sbjct: 287 ETYN-----------------------------------LMINLYGKASKSYMSWKLYCE 311
Query: 224 V---PCR-DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEY 279
+ C+ ++ +++ +A L E+A +F L+ DG D + +++L+ Y
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 280 YDIGKLAHSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIRNVV-AWNTIIV 338
SL+ + D + +++ Y + +DA VF+EM + + ++
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 339 GCGNYGDGSEVLK---LLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLS 395
Y +V K ++++M G PD ++S ++L G T+ + A
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 396 FQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKAT 451
+S N LI+ Y K G + + F +E PD+VTWTS I AY+ K
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 551
Query: 452 EMFEKMLSCGVVPDRVSFLGVLSACA---HCGLVTKGLHYFNLMTSVYQIVP 500
E+FE+M+ G PD + +LSAC+ VT L + +V +VP
Sbjct: 552 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVP 603
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 428 EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLH 487
+P++ T+T+L++A+A G EKA E+FE++ G+ PD + ++ + + G
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 488 YFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
F+LM + PD Y +VD GR GL +A + M
Sbjct: 378 IFSLMQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 165/425 (38%), Gaps = 65/425 (15%)
Query: 83 LIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDS 142
++ G S N ++ Y K + ++A++L E+ + +N+ N+
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS---IGFNV---------NQGSF 438
Query: 143 SAPLCV-----------SYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
++ +C+ + MLL + P LI + ++L +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP----EE 247
GF +D AL+ + G ++ A R + R VM V + C +E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 248 AFSMFNLLRMDGANGDEFTFSSLL-------SVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
AF + + G D +T+S L+ V + ++++D K R DV
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-------RNGMLPDVY 611
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDM 356
S +I+ K E + + FDEM+ +NV V +N +I G S L+L DM
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA--------NSLIS 408
+G SP+ T +S I S + E KL F+E +LI
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEA--------KLLFEEMRMEGLEPNVFHYTALID 723
Query: 409 AYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
Y K G + R P+ +T+T +I YA G +A+ + +M G+VP
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 465 DRVSF 469
D +++
Sbjct: 784 DSITY 788
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 213/533 (39%), Gaps = 126/533 (23%)
Query: 99 LSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVA--GRDNE---------NDSS 143
++ + K ++E+A KLF ++ NVV++N +I G+ GR +E
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 144 APLCVSY-------------------FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
P ++Y K M + P+ + +N LI S ++ ++ I+
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR---------------AFCAVPCRDL 229
+ V G L L+ Y K G +NA R +F +V C
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC--- 443
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHS 288
++C+ ++ AL + E LLR G T +L+S +C GK + +
Sbjct: 444 LLCSHLMFDSALRFVGEM------LLRNMSPGGGLLT--TLISGLCKH------GKHSKA 489
Query: 289 L-----ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVG 339
L L + F D ++AL++ + + +A + E+L R + V++NT+I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY--ASAITETLQ----------- 386
C E L +M++ G PD T S I +CG + + E +Q
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYS--ILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 387 ----THAIAV------------KLSFQEFLS--------VANSLISAYSKCGNITSALKC 422
T+++ + + F E +S V N LI AY + G ++ AL+
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE- 666
Query: 423 FRLTEE-------PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
L E+ P+ T+TSLI + + E+A +FE+M G+ P+ + ++
Sbjct: 667 --LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
G + K M S + P+ YT ++ R G + EA LL M
Sbjct: 725 YGKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 11/241 (4%)
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSE 348
+ DV + + IN + K + +A +F +M + NVV +NT+I G G G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLIS 408
M+ G P +T S + A I + K F + V N+LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 409 AYSKCGNITSALKCFRLTEEPDL----VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
++ + G++ A++ L L T+ +LI Y +GQA+ A + ++MLS G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 465 DRVSFLGVLS-ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
++ SF V+ C+H + L + M + + P T L+ L ++G +A E
Sbjct: 434 NQGSFTSVICLLCSHL-MFDSALRFVGEML-LRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 524 L 524
L
Sbjct: 492 L 492
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 165/425 (38%), Gaps = 65/425 (15%)
Query: 83 LIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGRNVVSWNIMIRGVAGRDNENDS 142
++ G S N ++ Y K + ++A++L E+ + +N+ N+
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS---IGFNV---------NQGSF 438
Query: 143 SAPLCV-----------SYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVK 191
++ +C+ + MLL + P LI + ++L +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 192 VGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCRDLVMCNVMISCYALNCLP----EE 247
GF +D AL+ + G ++ A R + R VM V + C +E
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 248 AFSMFNLLRMDGANGDEFTFSSLL-------SVCDTLEYYDIGKLAHSLILRQAFDSDVL 300
AF + + G D +T+S L+ V + ++++D K R DV
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-------RNGMLPDVY 611
Query: 301 VASALINMYAKNENITDARGVFDEMLIRNV----VAWNTIIVGCGNYGDGSEVLKLLRDM 356
S +I+ K E + + FDEM+ +NV V +N +I G S L+L DM
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 357 LREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVA--------NSLIS 408
+G SP+ T +S I S + E KL F+E +LI
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEA--------KLLFEEMRMEGLEPNVFHYTALID 723
Query: 409 AYSKCGNITSALKCFRLTEE----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
Y K G + R P+ +T+T +I YA G +A+ + +M G+VP
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 465 DRVSF 469
D +++
Sbjct: 784 DSITY 788
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 213/533 (39%), Gaps = 126/533 (23%)
Query: 99 LSVYLKCKEIEDADKLFDELP----GRNVVSWNIMIRGVA--GRDNE---------NDSS 143
++ + K ++E+A KLF ++ NVV++N +I G+ GR +E
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 144 APLCVSY-------------------FKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQ 184
P ++Y K M + P+ + +N LI S ++ ++ I+
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 185 LHCYTVKVGFDLDCFVGCALVDLYAKCGLVENARR---------------AFCAVPCRDL 229
+ V G L L+ Y K G +NA R +F +V C
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC--- 443
Query: 230 VMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLAHS 288
++C+ ++ AL + E LLR G T +L+S +C GK + +
Sbjct: 444 LLCSHLMFDSALRFVGEM------LLRNMSPGGGLLT--TLISGLCKH------GKHSKA 489
Query: 289 L-----ILRQAFDSDVLVASALINMYAKNENITDARGVFDEMLIR----NVVAWNTIIVG 339
L L + F D ++AL++ + + +A + E+L R + V++NT+I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 340 CGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGY--ASAITETLQ----------- 386
C E L +M++ G PD T S I +CG + + E +Q
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYS--ILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 387 ----THAIAV------------KLSFQEFLS--------VANSLISAYSKCGNITSALKC 422
T+++ + + F E +S V N LI AY + G ++ AL+
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE- 666
Query: 423 FRLTEE-------PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSA 475
L E+ P+ T+TSLI + + E+A +FE+M G+ P+ + ++
Sbjct: 667 --LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 476 CAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
G + K M S + P+ YT ++ R G + EA LL M
Sbjct: 725 YGKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 11/241 (4%)
Query: 293 QAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGNYGDGSE 348
+ DV + + IN + K + +A +F +M + NVV +NT+I G G G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 349 VLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLIS 408
M+ G P +T S + A I + K F + V N+LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 409 AYSKCGNITSALKCFRLTEEPDL----VTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVP 464
++ + G++ A++ L L T+ +LI Y +GQA+ A + ++MLS G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 465 DRVSFLGVLS-ACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFE 523
++ SF V+ C+H + L + M + + P T L+ L ++G +A E
Sbjct: 434 NQGSFTSVICLLCSHL-MFDSALRFVGEML-LRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 524 L 524
L
Sbjct: 492 L 492
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 193/458 (42%), Gaps = 41/458 (8%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNV----VSWNIMIR--GVAGRDNENDSSAPLCVS 149
N ++ +Y K + DA LF E+ V V++N MI G G +E +S
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES------- 361
Query: 150 YFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYA 209
K+M + + PD T+N L+ +I ++ + KVG D A++ +
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 210 KCGLVENARRAFCAVPCRDLVMCN-----VMISCYALNCLPEEAFSMFNLLRMDGANGDE 264
+ +V A A R+ + + V++ Y L +A ++F ++D
Sbjct: 422 QRKMVAEVE-AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV---- 476
Query: 265 FTFSSLLSVCDTLEYYDIGKLAHSLILRQ----AFDSDVLVASALINMYAKNENITDARG 320
+ ++L +V D + A ++ + +DVL + +I Y K + A
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 321 VFDEMLIRNVVAW------NTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISL 374
+F M +N W N++ E ++L +ML G P T ++ I+
Sbjct: 537 LFKGM--KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 375 CGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE----PD 430
+++ + + K + V SLI+ +++ G + A++ FR+ EE +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFN 490
+ TSLI AY+ G E+A +++KM PD + +LS CA G+V++ FN
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN 714
Query: 491 LMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
+ + D + ++ L G++DEA E+ M
Sbjct: 715 ALRE--KGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 26/249 (10%)
Query: 401 SVANSLISAYSKCGNITSALKCFRLTEEP----DLVTWTSLIHAYAFHGQAEKATEMFEK 456
S N+LI Y K G + A F + D VT+ ++IH HG +A + +K
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 457 MLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYG 516
M G+ PD ++ +LS A G + L Y+ + V + PD+ + ++ +L +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV-GLFPDTVTHRAVLHILCQRK 424
Query: 517 LIDEAFELLRSM---PVEVESDTLGAFIGSCKLHANIGLAEWAA---EKLFIIEPEKSVN 570
++ E ++ M + ++ ++ + +++ N GL A E+ + S
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIM---QMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 571 YAAMSNIYASQRDWCDVESA----RKMIGDKGDAKVPGCSWIEVANQVHSFVSRDKTHPK 626
AA+ ++YA + W + E+ R M G + D +E + ++ + K H K
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDV-------LEYNVMIKAY-GKAKLHEK 533
Query: 627 ALEMYATLK 635
AL ++ +K
Sbjct: 534 ALSLFKGMK 542
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 179/412 (43%), Gaps = 41/412 (9%)
Query: 96 NQILSVYLKCKEIEDADKLFDELPGRNV----VSWNIMIRGVAGRDNENDSSAPLCVSYF 151
N ++ Y K K E A LF + + ++N + + +AG D +++ L
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA---- 574
Query: 152 KRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFVGCALVDLYAKC 211
ML P T+ +I S V+ + + L+ K G + V +L++ +A+
Sbjct: 575 -EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 212 GLVENARRAFC-----AVPCRDLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFT 266
G+VE A + F V +V+ +++ + + CL EEA +++ ++ D
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL-EEARRVYDKMKDSEGGPDVAA 692
Query: 267 FSSLLSVCDTLEYYDIGKLAHSLI--LRQAFDSDVLVASALINMYAKNENITDARGVFDE 324
+S+LS+C L I A S+ LR+ DV+ + ++ +Y + +A V +E
Sbjct: 693 SNSMLSLCADL---GIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 325 M----LIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLRE-GFSPDELTISSTISLC---G 376
M L+ + ++N ++ G SE +L +ML E D T + +L G
Sbjct: 750 MRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
Query: 377 YASAITETLQTHAIAVKLSFQEFLSVANSLISA--YSKCGNITSALK-CFRLT--EEP-D 430
S LQT ++ E +A I+A +S G AL+ C LT E P +
Sbjct: 810 VPSEAVSQLQT-------AYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPRE 862
Query: 431 LVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLV 482
+ ++I+ Y+ G + A + + +M G+ PD V+ ++ G+V
Sbjct: 863 HFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV 914
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 204/479 (42%), Gaps = 66/479 (13%)
Query: 98 ILSVYLKCKEIEDADKLF-----DELPGRNVV-----SWNIMIR--GVAGRDNENDSSAP 145
+L +Y K +E + A++ F DE + V ++N MI G +G+ E +
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET-- 320
Query: 146 LCVSYFKRMLLEKVVPDYVTFNGLI------GSCVQFHNIGVGIQLHCYTVKVGFDLDCF 199
FKRML E +VP VTFN +I G + ++ ++LHC +++
Sbjct: 321 -----FKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNI--- 372
Query: 200 VGCALVDLYAKCGLVENARRAFCAVP----CRDLVMCNVMISCYALNCLPEEAFSMFNLL 255
L+ L+ K +E A F + D V ++ +++ + EEA + +
Sbjct: 373 ----LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 256 RMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVAS----ALINMYAK 311
D DE+T S+L T Y + L S + F ++S A I+ Y +
Sbjct: 429 DDDNVEIDEYTQSAL-----TRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGE 483
Query: 312 NENITDARGVF---DEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTI 368
+++A VF E+ R V+ +N +I G + +L M+ G +PD+ T
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 369 SSTISLCGYASAITETLQTHAIAVKL-SFQEFLSVAN-----SLISAYSKCGNITSALKC 422
++ + + A H L +E V++ ++IS++ K G + A +
Sbjct: 544 NTLVQILASAD------MPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 423 FR-LTE---EPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAH 478
++ + E EPD+V + LI+A+A G ++A E M G+ + V + ++
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 479 CGLVTKGLH-YFNLMTSVYQI-VPDSDHYTCLVDLLGRYGLIDEAFELLRSMPVEVESD 535
G + + Y L+ S + PD C+++L ++ +A + SM E++
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN 716
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 201/494 (40%), Gaps = 59/494 (11%)
Query: 122 NVVSWNIMIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGV 181
NV+ +NIM+R + G+ S + M+ + + P N G+ + ++ G
Sbjct: 186 NVIHYNIMLR-ILGKA----CKWRYVQSLWDEMIRKGIKP----INSTYGTLIDVYSKG- 235
Query: 182 GIQLH--CY---TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMC 232
G+++H C+ K+G D ++ +Y K + A F C D +C
Sbjct: 236 GLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVC 295
Query: 233 ------NVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLA 286
N MI Y + +EA F + +G TF++++ + Y + G+L
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI-----YGNNGQLG 350
Query: 287 HSLILRQAFD----SDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIV 338
L + D + LI+++ KN +I A F EM L + V++ T++
Sbjct: 351 EVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLY 410
Query: 339 GCGNYGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITET---LQTHAIAVKLS 395
E L+ +M + DE T S+ + A + ++ + +A +S
Sbjct: 411 AFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMS 470
Query: 396 FQEFLSVANSLISAYSKCGNITSALKCFRLTEEPD---LVTWTSLIHAYAFHGQAEKATE 452
+ + ++ I AY + G ++ A + F +E + ++ + +I AY EKA E
Sbjct: 471 SEGY----SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACE 526
Query: 453 MFEKMLSCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLL 512
+FE M+S GV PD+ ++ ++ A + KG Y M V D Y ++
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRET-GYVSDCIPYCAVISSF 585
Query: 513 GRYGLIDEAFELLRSM-PVEVESDT------LGAFIGSCKLHANIGLAEWAAEKLFIIEP 565
+ G ++ A E+ + M +E D + AF + + + E E P
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI---P 642
Query: 566 EKSVNYAAMSNIYA 579
SV Y ++ +Y
Sbjct: 643 GNSVIYNSLIKLYT 656
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 46/310 (14%)
Query: 228 DLVMCNVMISCYALNCLPEEAFSMFNLLRMDGANGDEFTFSSLLS-VCDTLEYYDIGKLA 286
DL CN++++C+ + P A S + G D TF+SL++ C + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 287 HSLILRQAFDSDVLVASALINMYAKNENITDARGVFDEM----LIRNVVAWNTIIVGCGN 342
+ ++ DV++ + +I+ KN ++ A +FD+M + +VV + +++ G N
Sbjct: 166 NQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 343 YGDGSEVLKLLRDMLREGFSPDELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSV 402
G + LLR M + PD +T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITF---------------------------------- 250
Query: 403 ANSLISAYSKCGNITSALKCF----RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKML 458
N+LI A+ K G A + + R++ P++ T+TSLI+ + G ++A +MF M
Sbjct: 251 -NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 459 SCGVVPDRVSFLGVLSACAHCGLVTKGLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLI 518
+ G PD V++ +++ C V + F M S + ++ YT L+ G+ G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 519 DEAFELLRSM 528
+ A E+ M
Sbjct: 369 NVAQEVFSHM 378
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 170/404 (42%), Gaps = 19/404 (4%)
Query: 142 SSAP-LCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCYTVKVGFDLDCFV 200
SS P L S+ +M+ PD VTF LI + + + + V++G D +
Sbjct: 120 SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 201 GCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCLPEEAFSMFNLLR 256
++D K G V A F + D+VM +++ + +A S+ +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 257 MDGANGDEFTFSSLL-SVCDTLEYYDIGKLAHSLILRQAFDSDVLVASALINMYAKNENI 315
D TF++L+ + ++ D +L + +I R + ++ ++LIN + +
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLINGFCMEGCV 298
Query: 316 TDARGVFDEMLIR----NVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPDELTISST 371
+AR +F M + +VVA+ ++I G + +K+ +M ++G + + +T ++
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 372 ISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCFRLTEE--- 428
I G + + V + N L+ G + AL F ++
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 429 ----PDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGVVPDRVSFLGVLSACAHCGLVTK 484
P++ T+ L+H ++G+ EKA +FE M + +++ ++ G V
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 485 GLHYFNLMTSVYQIVPDSDHYTCLVDLLGRYGLIDEAFELLRSM 528
++ F + S + P+ YT ++ L R GL EA L R M
Sbjct: 479 AVNLFCSLPS-KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/402 (17%), Positives = 156/402 (38%), Gaps = 45/402 (11%)
Query: 73 LPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKEIEDADKLFDELPGR----NVVSWNI 128
+ E + +++ G + + I+ K + A LFD++ +VV +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 129 MIRGVAGRDNENDSSAPLCVSYFKRMLLEKVVPDYVTFNGLIGSCVQFHNIGVGIQLHCY 188
++ G+ D+ S + M K+ PD +TFN LI + V+ +L+
Sbjct: 218 LVNGLCNSGRWRDAD-----SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 189 TVKVGFDLDCFVGCALVDLYAKCGLVENARRAFCAVPCR----DLVMCNVMISCYALNCL 244
+++ + F +L++ + G V+ AR+ F + + D+V +I+ +
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 245 PEEAFSMFNLLRMDGANGDEFTFSSLLSVCDTLEYYDIGKLAHSLILRQAFDSDVLVASA 304
++A +F + G G+ T+++L+ + ++ + S ++ + ++ +
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 305 LINMYAKNENITDARGVFDEMLIRNVVAWNTIIVGCGNYGDGSEVLKLLRDMLREGFSPD 364
L++ N + A +F++M R + +G +P+
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREM----------------------------DGVAPN 424
Query: 365 ELTISSTISLCGYASAITETLQTHAIAVKLSFQEFLSVANSLISAYSKCGNITSALKCF- 423
T + + Y + + L K + +I K G + +A+ F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 424 ---RLTEEPDLVTWTSLIHAYAFHGQAEKATEMFEKMLSCGV 462
+P++VT+T++I G +A +F KM GV
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526