Miyakogusa Predicted Gene

Lj5g3v0465910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0465910.1 Non Chatacterized Hit- tr|I1LY37|I1LY37_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.11,2e-18,seg,NULL,CUFF.53002.1
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54200.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    87   2e-17
AT3G13980.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    74   1e-13

>AT1G54200.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins
           in 136 species: Archae - 0; Bacteria - 72; Metazoa -
           212; Fungi - 78; Plants - 102; Viruses - 0; Other
           Eukaryotes - 620 (source: NCBI BLink). |
           chr1:20235855-20236955 FORWARD LENGTH=366
          Length = 366

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 32/196 (16%)

Query: 8   RRDHNKLQSPSFSSTLLDQIYRSIDDGQSKSSESNFYREXXXXXXSKRHWTEKKDRTDNN 67
           RRDH   + PSFSSTLLDQIYRSIDD  + SS               +H   +  R   N
Sbjct: 20  RRDH---RHPSFSSTLLDQIYRSIDDSSTNSS----------SMRKTKHQNREDTRVSAN 66

Query: 68  --NNKVRSKNVAVVEETNNRKFHHDHDPDVLXXXXXXXXXXXXXXXXXXXXXXXXWPRPV 125
             ++  RSKN+  +E      F                                  P+P+
Sbjct: 67  RRDDFNRSKNLKTIEPV----FFKHSSSSSSDSSGFSSSESDYFYRRSKSSPAISHPKPI 122

Query: 126 RTSASFRWENEKHATRVQSFMHLTAQHKHGVTGVRDEEALIKSKSRALKIYNNLKKIKQP 185
           RT+             V+ F      H+   +  ++  + +K+KS+ALKIY++LKK+KQP
Sbjct: 123 RTT-------------VERFERSPQNHRPNSSNKQEHGSFLKTKSKALKIYSDLKKVKQP 169

Query: 186 VSPGGKLTSFLNSLFA 201
           +SPGG+L +FLNS+F 
Sbjct: 170 ISPGGRLATFLNSIFT 185


>AT3G13980.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins
           in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246;
           Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes
           - 1059 (source: NCBI BLink). | chr3:4619189-4620262
           REVERSE LENGTH=357
          Length = 357

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 100/261 (38%), Gaps = 43/261 (16%)

Query: 122 PRPVRTSASFRWENEKHATRVQSFMHLTAQHKHGVTGVRDEEALIKSKSRALKIYNNLKK 181
           P+P+RTS+                      H   V   ++    +++KS+ALKIY++LKK
Sbjct: 125 PKPIRTSS--------------------VDHSSAVQKPKELGGFLRTKSKALKIYSDLKK 164

Query: 182 IKQPVSPGGKLTSFLNSLFATGEAXXXXXXNDEIVERRVNXXXXXXXXXXXXXXXXXXXX 241
           +KQP+SPGG+L +FLNSLF               V   V                     
Sbjct: 165 VKQPISPGGRLATFLNSLFTNAATNPKKHKKTTTVA--VVEEPHSSSTCSSASSFSRSCL 222

Query: 242 XKVSSCDRENMSNGVKRTVRFYPETXXXXXXXXXXAAREFLREYRYNN-------QNKKT 294
            K  S      S   KR+VRF P                +  E  Y+N       ++++ 
Sbjct: 223 SKTPSS-----SGKSKRSVRFCPVNVILDEDSSFTMPYAYNNERLYDNNEAKRVEEHRRV 277

Query: 295 DLVLKDLSLRKNANXXXXXXX-------XXXXXXXXXXXXXLFELDHLAVLGNGLYDEEL 347
               KDL LR   N                           LFEL++L+ +G   Y EEL
Sbjct: 278 IQAAKDL-LRTYHNKNKVTTTNINNVEEDDEDDAASCASSDLFELENLSAIGIERYREEL 336

Query: 348 PVFETTHFSS-NPTIANGIRV 367
           PV+ETT   + N  IA G+ V
Sbjct: 337 PVYETTRLDNMNRVIATGLIV 357