Miyakogusa Predicted Gene

Lj5g3v0455900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0455900.1 tr|B9IKC9|B9IKC9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_668840 PE=4
SV=1,84.29,0,ZF_PHD_2,Zinc finger, PHD-finger; DUF3594,Protein of
unknown function DUF3594; PHD,Zinc finger, PHD-,CUFF.53001.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42790.1 | Symbols: AL3 | alfin-like 3 | chr3:14878128-148796...   312   1e-85
AT5G20510.1 | Symbols: AL5 | alfin-like 5 | chr5:6939991-6942846...   308   2e-84
AT5G26210.1 | Symbols: AL4 | alfin-like 4 | chr5:9158566-9160221...   291   4e-79
AT2G02470.1 | Symbols: AL6 | alfin-like 6 | chr2:652837-654621 F...   288   2e-78
AT2G02470.2 | Symbols: AL6 | alfin-like 6 | chr2:652837-654621 F...   286   9e-78
AT1G14510.1 | Symbols: AL7 | alfin-like 7 | chr1:4962171-4964154...   281   3e-76
AT5G05610.2 | Symbols: AL1 | alfin-like 1 | chr5:1677331-1678942...   249   2e-66
AT5G05610.1 | Symbols: AL1 | alfin-like 1 | chr5:1677331-1678942...   249   2e-66
AT3G11200.1 | Symbols: AL2 | alfin-like 2 | chr3:3508387-3510418...   238   3e-63
AT3G11200.2 | Symbols: AL2 | alfin-like 2 | chr3:3508387-3510195...   196   2e-50

>AT3G42790.1 | Symbols: AL3 | alfin-like 3 | chr3:14878128-14879618
           REVERSE LENGTH=250
          Length = 250

 Score =  312 bits (800), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/258 (60%), Positives = 178/258 (68%), Gaps = 10/258 (3%)

Query: 1   MDGGA--YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWX 58
           M+GGA  YNPRTVEEVF+DFKGRR A++KALTTDV+EFYQQCDPEKENLCLYG P+E+W 
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 59  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSD 118
                            GINFARDG+ +K+WLSLVA+HSDAWLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 119 RKRLFGMINDLPTVFEVVTGVAKKQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXX 178
           RKRLF MIND+PT+FEVVTG+AK +                      V+ S+G  SK   
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSK----VRTSEGKSSK--- 173

Query: 179 XXXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARA 238
                                 TLCGACG+S  ADEFWICCD+CEKWFHGKCVKITPARA
Sbjct: 174 -TKQPKEEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARA 232

Query: 239 EHIKQYKCPSCSNKRARS 256
           EHIKQYKCPSCSNKRAR+
Sbjct: 233 EHIKQYKCPSCSNKRARA 250


>AT5G20510.1 | Symbols: AL5 | alfin-like 5 | chr5:6939991-6942846
           REVERSE LENGTH=260
          Length = 260

 Score =  308 bits (789), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/259 (58%), Positives = 177/259 (68%), Gaps = 4/259 (1%)

Query: 1   MDGGA--YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWX 58
           M+GG   Y+PRTVEEVFRDFKGRRA +I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E W 
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 59  XXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSD 118
                            GINFARDGMQ+++WLSLVAVHSDAWLLSV+FYFG+RFGFD++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 119 RKRLFGMINDLPTVFEVVTGVAKKQGXXXXXXXXXXXXXXXXXEPQ--VVKYSKGLISKX 176
           RKRLF MIN++PTV+EVVTG A+KQ                       +   S   I   
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPA 236
                                   TLCGACG++YA+DEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240

Query: 237 RAEHIKQYKCPSCSNKRAR 255
           RAEHIK YKCP+CSNKRAR
Sbjct: 241 RAEHIKHYKCPTCSNKRAR 259


>AT5G26210.1 | Symbols: AL4 | alfin-like 4 | chr5:9158566-9160221
           REVERSE LENGTH=255
          Length = 255

 Score =  291 bits (744), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 161/258 (62%), Positives = 174/258 (67%), Gaps = 10/258 (3%)

Query: 3   GGAYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXX 62
           GGAYNPRTVEEVFRDFKGRRA +IKALTTDV+EF++ CDPEKENLCLYG P+E W     
Sbjct: 4   GGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLP 63

Query: 63  XXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRL 122
                        GINFARDGM +KDWLSLVAVHSDAWLL+VAF+FGARFGFDK+DRKRL
Sbjct: 64  AEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRL 123

Query: 123 FGMINDLPTVFEVVTGVAKKQGX----XXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXX 178
           F M+NDLPT+FEVV G AKKQG                          K+SK        
Sbjct: 124 FNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSK------PE 177

Query: 179 XXXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARA 238
                                 T CGACGESYAADEFWICCD+CE WFHGKCVKITPARA
Sbjct: 178 PKDDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARA 237

Query: 239 EHIKQYKCPSCSNKRARS 256
           EHIKQYKCPSCSNKRARS
Sbjct: 238 EHIKQYKCPSCSNKRARS 255


>AT2G02470.1 | Symbols: AL6 | alfin-like 6 | chr2:652837-654621
           FORWARD LENGTH=256
          Length = 256

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 142/248 (57%), Positives = 161/248 (64%), Gaps = 1/248 (0%)

Query: 8   PRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXX 67
           PRTVEEVF DF+GRRA LIKALT D+ +FYQ CDPEKENLCLYG P+E W          
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 68  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRLFGMIN 127
                   GINFARDGMQ+KDW+SLVAVHSD+WLLSVAFYFGARFGF K++RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 128

Query: 128 DLPTVFEVVTGVAKKQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXXXXXXXXXX 187
           +LPT+FEVV+G AK+                     Q    SK +               
Sbjct: 129 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKSRQSESLSK-VAKMSSPPPKEEEEEE 187

Query: 188 XXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCP 247
                         +CGACG++Y  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCP
Sbjct: 188 DESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCP 247

Query: 248 SCSNKRAR 255
           +CSNKRAR
Sbjct: 248 TCSNKRAR 255


>AT2G02470.2 | Symbols: AL6 | alfin-like 6 | chr2:652837-654621
           FORWARD LENGTH=247
          Length = 247

 Score =  286 bits (732), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 143/248 (57%), Positives = 163/248 (65%), Gaps = 10/248 (4%)

Query: 8   PRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXX 67
           PRTVEEVF DF+GRRA LIKALT D+ +FYQ CDPEKENLCLYG P+E W          
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 68  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRLFGMIN 127
                   GINFARDGMQ+KDW+SLVAVHSD+WLLSVAFYFGARFGF K++RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 128

Query: 128 DLPTVFEVVTGVAKKQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXXXXXXXXXX 187
           +LPT+FEVV+G AK+                   +P  VK +K                 
Sbjct: 129 ELPTIFEVVSGNAKQS------KDLSVNNNNSKSKPSGVKVAK----MSSPPPKEEEEEE 178

Query: 188 XXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCP 247
                         +CGACG++Y  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCP
Sbjct: 179 DESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCP 238

Query: 248 SCSNKRAR 255
           +CSNKRAR
Sbjct: 239 TCSNKRAR 246


>AT1G14510.1 | Symbols: AL7 | alfin-like 7 | chr1:4962171-4964154
           REVERSE LENGTH=252
          Length = 252

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/246 (55%), Positives = 158/246 (64%), Gaps = 6/246 (2%)

Query: 8   PRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXX 67
           PRTVEEVF DF+GRRA LIKAL+TDV++FY QCDPEKENLCLYG P+E W          
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 68  XXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRLFGMIN 127
                   GINFARDGMQ+KDW+SLVAVHSD+WL+SVAFYFGARFGF K++RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 128 DLPTVFEVVTGVAKKQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXXXXXXXXXX 187
           DLPT+FEVVTG AK+                         ++K                 
Sbjct: 129 DLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKA------SKMSPPPRKE 182

Query: 188 XXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCP 247
                         +CGACG++Y  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCP
Sbjct: 183 DESGDEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCP 242

Query: 248 SCSNKR 253
           SC+  +
Sbjct: 243 SCTTSK 248


>AT5G05610.2 | Symbols: AL1 | alfin-like 1 | chr5:1677331-1678942
           REVERSE LENGTH=241
          Length = 241

 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 127/256 (49%), Positives = 152/256 (59%), Gaps = 17/256 (6%)

Query: 1   MDGGAYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXX 60
           M   + NPRTVEE+F+DF GRR+  ++AL+ DV++FY  CDPE ENLCLYG P+  W   
Sbjct: 1   MAAESSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVN 60

Query: 61  XXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRK 120
                          GINFARDGMQ KDWLSLVAVHSD WLLSV+ YFGAR   ++++RK
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERK 118

Query: 121 RLFGMINDLPTVFEVVTGVAK-KQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXX 179
           RLF +INDLPT+FEVVTG    K G                      K   G+       
Sbjct: 119 RLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGS--------------KSRNGVKRSIEGQ 164

Query: 180 XXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAE 239
                                TLCG+CG +Y  DEFWICCD+CE+W+HGKCVKITPA+AE
Sbjct: 165 TKSTPKLMEESYEDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAE 224

Query: 240 HIKQYKCPSCSNKRAR 255
            IKQYKCPSC  K+ R
Sbjct: 225 SIKQYKCPSCCTKKGR 240


>AT5G05610.1 | Symbols: AL1 | alfin-like 1 | chr5:1677331-1678942
           REVERSE LENGTH=241
          Length = 241

 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 127/256 (49%), Positives = 152/256 (59%), Gaps = 17/256 (6%)

Query: 1   MDGGAYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXX 60
           M   + NPRTVEE+F+DF GRR+  ++AL+ DV++FY  CDPE ENLCLYG P+  W   
Sbjct: 1   MAAESSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVN 60

Query: 61  XXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRK 120
                          GINFARDGMQ KDWLSLVAVHSD WLLSV+ YFGAR   ++++RK
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERK 118

Query: 121 RLFGMINDLPTVFEVVTGVAK-KQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXX 179
           RLF +INDLPT+FEVVTG    K G                      K   G+       
Sbjct: 119 RLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGS--------------KSRNGVKRSIEGQ 164

Query: 180 XXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAE 239
                                TLCG+CG +Y  DEFWICCD+CE+W+HGKCVKITPA+AE
Sbjct: 165 TKSTPKLMEESYEDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAE 224

Query: 240 HIKQYKCPSCSNKRAR 255
            IKQYKCPSC  K+ R
Sbjct: 225 SIKQYKCPSCCTKKGR 240


>AT3G11200.1 | Symbols: AL2 | alfin-like 2 | chr3:3508387-3510418
           REVERSE LENGTH=246
          Length = 246

 Score =  238 bits (607), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/251 (50%), Positives = 155/251 (61%), Gaps = 16/251 (6%)

Query: 7   NPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXX 66
           NPRTVEE+F+D+  RRAAL++ALT DV++FY QCDPEKENLCLYG P+E W         
Sbjct: 9   NPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEV 68

Query: 67  XXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRLFGMI 126
                    GINFARDGMQ KDWLSLVAVHSD WLLSV+FYFGAR   ++++RKRLF +I
Sbjct: 69  PPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLI 126

Query: 127 NDLPTVFEVVTG--VAKKQGXXXXXXXXXXXXXXXXXEPQVVKYSKGLISKXXXXXXXXX 184
           NDLPT+F+VVTG    K                    + Q    +  L+ +         
Sbjct: 127 NDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEE--------- 177

Query: 185 XXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCDICEKWFHGKCVKITPARAEHIKQY 244
                           TLCG+CG  Y  +EFWICCD+CE+W+HGKCVKITPA+AE IKQY
Sbjct: 178 ---SYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQY 234

Query: 245 KCPSCSNKRAR 255
           KCP C  K+ R
Sbjct: 235 KCPPCCAKKGR 245


>AT3G11200.2 | Symbols: AL2 | alfin-like 2 | chr3:3508387-3510195
           REVERSE LENGTH=233
          Length = 233

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/215 (47%), Positives = 123/215 (57%), Gaps = 16/215 (7%)

Query: 43  EKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLL 102
           EKENLCLYG P+E W                  GINFARDGMQ KDWLSLVAVHSD WLL
Sbjct: 32  EKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLL 91

Query: 103 SVAFYFGARFGFDKSDRKRLFGMINDLPTVFEVVTG--VAKKQGXXXXXXXXXXXXXXXX 160
           SV+FYFGAR   ++++RKRLF +INDLPT+F+VVTG    K                   
Sbjct: 92  SVSFYFGAR--LNRNERKRLFSLINDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRS 149

Query: 161 XEPQVVKYSKGLISKXXXXXXXXXXXXXXXXXXXXXXXXXTLCGACGESYAADEFWICCD 220
            + Q    +  L+ +                         TLCG+CG  Y  +EFWICCD
Sbjct: 150 IDGQTKSSTPKLMEE------------SYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCD 197

Query: 221 ICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 255
           +CE+W+HGKCVKITPA+AE IKQYKCP C  K+ R
Sbjct: 198 VCERWYHGKCVKITPAKAESIKQYKCPPCCAKKGR 232