Miyakogusa Predicted Gene

Lj5g3v0445880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0445880.1 Non Chatacterized Hit- tr|I1M836|I1M836_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2261
PE=,51.79,0.00000004, ,CUFF.53000.1
         (88 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07430.1 | Symbols: HAI2 | highly ABA-induced PP2C gene 2 | c...    54   2e-08
AT2G29380.1 | Symbols: HAI3 | highly ABA-induced PP2C gene 3 | c...    48   1e-06

>AT1G07430.1 | Symbols: HAI2 | highly ABA-induced PP2C gene 2 |
           chr1:2281151-2282656 REVERSE LENGTH=442
          Length = 442

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 2   CKERLHEIAKEVNFVPDQNSEWKNTMKQGFICMDDEVQGWKSHINETTCRCELWT 56
           CKERLHE+ +E   + D+  EWK  M++ F  MD EV  W   +    CRCEL T
Sbjct: 173 CKERLHELVQE-EALSDKKEEWKKMMERSFTRMDKEVVRWGETVMSANCRCELQT 226


>AT2G29380.1 | Symbols: HAI3 | highly ABA-induced PP2C gene 3 |
           chr2:12608855-12610124 FORWARD LENGTH=362
          Length = 362

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 2   CKERLHEIAKE-VNFVPDQNSEWKNTMKQGFICMDDEVQGWKSHINETTCRCELWT 56
           C+ERLH++ +E ++   +   EWK TM++ F  MD EV  W   +    C+C+L T
Sbjct: 128 CRERLHKLVQEELSSDMEDEEEWKTTMERSFTRMDKEVVSWGDSVVTANCKCDLQT 183