Miyakogusa Predicted Gene

Lj5g3v0433750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0433750.1 Non Chatacterized Hit- tr|I1NEF3|I1NEF3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.82,0,GTP-BINDING
PROTEIN-PLANT,NULL; GTP-BINDING PROTEIN-RELATED,NULL; GTP1OBG,GTP
binding domain; no des,CUFF.53008.1
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07050.1 | Symbols:  | GTP-binding family protein | chr3:2229...   680   0.0  
AT1G52980.1 | Symbols:  | GTP-binding family protein | chr1:1973...   214   1e-55
AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosph...   137   2e-32
AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosph...   136   3e-32
AT4G02790.1 | Symbols:  | GTP-binding family protein | chr4:1247...    87   5e-17
AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07

>AT3G07050.1 | Symbols:  | GTP-binding family protein |
           chr3:2229602-2232279 REVERSE LENGTH=582
          Length = 582

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/487 (69%), Positives = 398/487 (81%), Gaps = 6/487 (1%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGLLE 98
           L L+ K +VEKDPGIPNDWPFKEQELKALE      ++E+EQ             LGL++
Sbjct: 39  LGLHRKPRVEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVD 98

Query: 99  DDDSSKVVDSNENT-TFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIE 157
           D+D+    ++ E+    V  RD S++AFYK+LVKVIE SDVILEVLDARDPLGTRC D+E
Sbjct: 99  DEDTKTEGETIEDLPKVVNVRDNSERAFYKELVKVIELSDVILEVLDARDPLGTRCTDME 158

Query: 158 KMVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSK 217
           +MVM+ GP+KHLVLLLNKIDLVPREA EKWL YLREE P VAFKCSTQ+QRSNLGWKSSK
Sbjct: 159 RMVMQAGPNKHLVLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCSTQEQRSNLGWKSSK 218

Query: 218 TAKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHV 277
            +K SN LQ SDCLGADTL+KLLKNYSRSHE+KKSITVG++GLPNVGKSSLINSLKR HV
Sbjct: 219 ASKPSNMLQTSDCLGADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHV 278

Query: 278 VNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTALKNCKRIEKLEDPISPV 337
           VNVGATPGLTRS+QEV LDKNVKLLDCPGVVMLKS  ND+S AL+NCKRIEKL+DP+SPV
Sbjct: 279 VNVGATPGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPV 338

Query: 338 KEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEG 397
           KEILKLCP  +LVTLYKIPSF++VDDFL KV+TVRGKLKKGG+VD +AAARIVLHDWNEG
Sbjct: 339 KEILKLCPKDMLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEG 398

Query: 398 KIPYYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNSETSFIGSLKSADAFDPVEVPSSG 457
           KIPYYTMPP RDQG  +E+KIV+E AK+FNID+VY+ E+SFIGSLK+ + F+PV +PS+G
Sbjct: 399 KIPYYTMPPKRDQGGHAESKIVTELAKDFNIDEVYSGESSFIGSLKTVNEFNPVIIPSNG 458

Query: 458 PLNLDEAMLEDDQQVKPSEQEDPENMADNDSDEAM-EDDNGDASKNKGNSAASRQNEKLY 516
           PLN DE M+ED+ + +  E+ + E    +D DE+M  ++  +A K K  S   RQN KLY
Sbjct: 459 PLNFDETMIEDESKTQTEEEAEHE----SDDDESMGGEEEEEAGKTKEKSETGRQNVKLY 514

Query: 517 TADGILN 523
            A+ +LN
Sbjct: 515 AAESMLN 521


>AT1G52980.1 | Symbols:  | GTP-binding family protein |
           chr1:19737493-19740201 FORWARD LENGTH=576
          Length = 576

 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/284 (39%), Positives = 164/284 (57%), Gaps = 24/284 (8%)

Query: 123 KAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHLVLLLNKIDLVPRE 182
           K  + +L KVI++SDVI++V+DARDP GTRC  +EK + +    KH++LLLNK DLVP  
Sbjct: 203 KRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAW 262

Query: 183 ALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKN 242
           A + WL+ L +E PT+AF  S                       ++   G  +LL +L+ 
Sbjct: 263 ATKGWLRVLSKEYPTLAFHAS-----------------------VNKSFGKGSLLSVLRQ 299

Query: 243 YSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLL 302
           ++R    K++I+VG VG PNVGKSS+IN+L+  +V  V   PG T+  Q + L K + L+
Sbjct: 300 FARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLI 359

Query: 303 DCPGVVMLKSKENDSSTALKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDSVD 362
           DCPGVV  +S++ ++   LK   R+  LED    + E+L+      L   YKI  ++   
Sbjct: 360 DCPGVV-YQSRDTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDDH 418

Query: 363 DFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTMPP 406
           DFL ++    GKL KGG  D    A+++LHDW  G+IP++  PP
Sbjct: 419 DFLLQLCKSSGKLLKGGEPDLMTGAKMILHDWQRGRIPFFVPPP 462


>AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:11625449-11627959
           FORWARD LENGTH=537
          Length = 537

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 154/336 (45%), Gaps = 35/336 (10%)

Query: 104 KVVDSNENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKM 163
           K+    EN   V T    +   ++ L +V+E SD+I+ V+DARDPL  RC D+E    ++
Sbjct: 136 KLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEI 195

Query: 164 GPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSN 223
              K  +LL+NK DL+P    EKW +Y         F  +     +  G    +  ++ +
Sbjct: 196 DEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPD 255

Query: 224 TLQLSD-----CLGADTLLKLLK-----------------NYSRSHEIKKSITVGLVGLP 261
           T Q +D       G D LL  LK                   + SH   + + VG VG P
Sbjct: 256 TTQKTDNPAVKVYGRDDLLDRLKLEALEIVKMRKSRGVSATSTESH--CEQVVVGFVGYP 313

Query: 262 NVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTAL 321
           NVGKSS IN+L       V +TPG T+  Q + + +++ L DCPG+V      +      
Sbjct: 314 NVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSFSSSRYEMVA 373

Query: 322 KNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKI--PSFDSVD---------DFLQKVST 370
                I+++ + +  +K + +L P   +  +Y I  P   S +         + L+    
Sbjct: 374 SGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPLASELLRTYCL 433

Query: 371 VRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTMPP 406
            RG +   G+ D   AAR +L D+ EGK+P++ MPP
Sbjct: 434 SRGYVASSGLPDETRAARQILKDYIEGKLPHFAMPP 469


>AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2646307-2649106
           FORWARD LENGTH=589
          Length = 589

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 35/337 (10%)

Query: 105 VVDSNENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMG 164
           +V   EN   V T    +   ++ L +V+E SD+I+ V+DARDPL  RC D+E    ++ 
Sbjct: 137 LVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEID 196

Query: 165 PDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNT 224
             K ++LL+NK DL+P +  EKW +Y R       F  +     +  G    +  +  + 
Sbjct: 197 EHKKIMLLVNKADLLPTDVREKWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDN 256

Query: 225 LQLSD-----CLGADTLLKLLK---------NYSRSHEI----------KKSITVGLVGL 260
           LQ +D       G D LL  L+           SR+  +          +    VG VG 
Sbjct: 257 LQKTDDPDIMIYGRDELLSRLQFEAQEIVKVRNSRAASVSSQSWTGEYQRDQAVVGFVGY 316

Query: 261 PNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTA 320
           PNVGKSS IN+L       V +TPG T+  Q + +   + L DCPG+V      +     
Sbjct: 317 PNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMI 376

Query: 321 LKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKI--PSFDSVD---------DFLQKVS 369
                 I+++ +    ++ +    P R++ ++Y I  P   + +         + L+   
Sbjct: 377 ASGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKSYC 436

Query: 370 TVRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTMPP 406
             RG +   G+ D   AAR++L D+  GK+P+Y MPP
Sbjct: 437 ASRGYVASSGLPDETKAARLILKDYIGGKLPHYAMPP 473


>AT4G02790.1 | Symbols:  | GTP-binding family protein |
           chr4:1247416-1249351 FORWARD LENGTH=372
          Length = 372

 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 38/292 (13%)

Query: 127 KDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHLVLLLNKIDLVPREALEK 186
           K+L + ++  DV++EV DAR PL T      KM   +G ++  +L+LN+ D++  +    
Sbjct: 108 KELREQLKLMDVVIEVRDARIPLSTTH---PKMDAWLG-NRKRILVLNREDMISNDDRND 163

Query: 187 WLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRS 246
           W +Y  ++   V F          LG  + K  +      L+  L  D       N  R 
Sbjct: 164 WARYFAKQGIKVIF------TNGKLGMGAMKLGR------LAKSLAGDV------NGKRR 205

Query: 247 HE--IKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDC 304
            +  + +S+  G++G PNVGKSSLIN L +  +      PG+TR M+ V+L K++ LLD 
Sbjct: 206 EKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDS 265

Query: 305 PGVVMLKSKENDSSTALKNCKRIEKLEDPISPVKEILKLCPSRL-------LVTLYKIPS 357
           PG++ ++  +  ++  L  C  I +     + V  IL    +R+       L   YKI  
Sbjct: 266 PGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQL 325

Query: 358 FDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTM--PPV 407
             +     +K     G    GG  D+  AA  +L D+ +GK  Y ++  PP+
Sbjct: 326 EGNCG---KKFVKTLGLNLFGG--DSHQAAFRILTDFRKGKFGYVSLERPPL 372


>AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:17374118-17376177
           FORWARD LENGTH=386
          Length = 386

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 40/190 (21%)

Query: 133 IEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLR 192
           ++ SD+++EV DAR PL +   D++  +      K  ++ LNK DL     L KW ++  
Sbjct: 44  LKLSDLVIEVRDARIPLSSANEDLQSQM----SAKRRIIALNKKDLANPNVLNKWTRH-- 97

Query: 193 EELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKS 252
                  F+ S Q         +      S+ ++L D +     LKL +  +R    + +
Sbjct: 98  -------FESSKQD------CIAINAHSRSSVMKLLDLVE----LKLKEVIAR----EPT 136

Query: 253 ITVGLVGLPNVGKSSLINSL-----------KRCHVVNVGATPGLTRSMQEVQLDK--NV 299
           + V +VG+PNVGKS+LINS+           +R     VG  PG+T+ +   ++    ++
Sbjct: 137 LLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSI 196

Query: 300 KLLDCPGVVM 309
            +LD PGV++
Sbjct: 197 YVLDSPGVLV 206