Miyakogusa Predicted Gene

Lj5g3v0422420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0422420.1 Non Chatacterized Hit- tr|G7IY67|G7IY67_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.43,0.000000000000008,SUBFAMILY NOT NAMED,NULL;
PHENYLALANYL-TRNA SYNTHETASE,NULL; DUF2431,Domain of unknown function
DUF2,97004_g.1
         (67 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55790.1 | Symbols:  | Domain of unknown function (DUF2431) |...    70   3e-13
AT1G55800.1 | Symbols:  | Domain of unknown function (DUF2431) |...    69   9e-13
AT5G56075.1 | Symbols:  | Domain of unknown function (DUF2431) |...    60   3e-10
AT5G56060.1 | Symbols:  | Domain of unknown function (DUF2431) |...    57   4e-09
AT5G25030.1 | Symbols:  | Domain of unknown function (DUF2431) |...    54   2e-08

>AT1G55790.1 | Symbols:  | Domain of unknown function (DUF2431) |
          chr1:20852685-20856069 REVERSE LENGTH=515
          Length = 515

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 36/43 (83%)

Query: 25 WVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDSY 67
          WV HYSS+HQILLVG+GDFSFS  LA  FGSA+NI A+S DSY
Sbjct: 20 WVKHYSSNHQILLVGEGDFSFSHSLATLFGSASNICASSLDSY 62


>AT1G55800.1 | Symbols:  | Domain of unknown function (DUF2431) |
          chr1:20856922-20858235 REVERSE LENGTH=314
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 35/43 (81%)

Query: 25 WVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDSY 67
          WV HYSS HQILLVG+GDFSFS  LA  FGSA+NI A+S DSY
Sbjct: 18 WVKHYSSKHQILLVGEGDFSFSCSLATCFGSASNIYASSLDSY 60


>AT5G56075.1 | Symbols:  | Domain of unknown function (DUF2431) |
           chr5:22709756-22710809 FORWARD LENGTH=256
          Length = 256

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 1/53 (1%)

Query: 14  ELEEEPEEGVKWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
           E++   +E  K + HY++  +ILLVG+GDFSFSL LA+AFGSA+N+ ATS D+
Sbjct: 56  EMQTNVQE-TKRLRHYTNKQKILLVGEGDFSFSLSLARAFGSASNLTATSLDT 107


>AT5G56060.1 | Symbols:  | Domain of unknown function (DUF2431) |
          chr5:22704008-22704892 FORWARD LENGTH=220
          Length = 220

 Score = 56.6 bits (135), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 26 VTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
          +  YS+  +ILLVG+GDFSFSL LA+ FGSA NI ATS D+
Sbjct: 9  LQQYSNKQKILLVGEGDFSFSLSLARVFGSATNITATSLDT 49


>AT5G25030.1 | Symbols:  | Domain of unknown function (DUF2431) |
          chr5:8620083-8620991 REVERSE LENGTH=193
          Length = 193

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 33/42 (78%)

Query: 24 KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHD 65
          K ++ YS++ +IL+VG+G+FSFSL LAKA GSA NI A S D
Sbjct: 7  KRLSRYSNEQKILVVGEGEFSFSLSLAKALGSATNITAISLD 48