Miyakogusa Predicted Gene
- Lj5g3v0422370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0422370.1 Non Chatacterized Hit- tr|F4I1X2|F4I1X2_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,42.96,8e-19,DUF2431,Domain of unknown function DUF2431;
SUBFAMILY NOT NAMED,NULL; PHENYLALANYL-TRNA
SYNTHETASE,N,gene.g58837.t1.1
(244 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55790.1 | Symbols: | Domain of unknown function (DUF2431) |... 171 5e-43
AT4G26485.1 | Symbols: | Domain of unknown function (DUF2431) |... 117 6e-27
AT5G56060.1 | Symbols: | Domain of unknown function (DUF2431) |... 100 9e-22
AT1G55800.1 | Symbols: | Domain of unknown function (DUF2431) |... 99 2e-21
AT5G56075.1 | Symbols: | Domain of unknown function (DUF2431) |... 80 1e-15
AT5G25030.1 | Symbols: | Domain of unknown function (DUF2431) |... 73 2e-13
>AT1G55790.1 | Symbols: | Domain of unknown function (DUF2431) |
chr1:20852685-20856069 REVERSE LENGTH=515
Length = 515
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 2 RRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPFN 61
RRFDRVIFNFPHAGFH +E +S +I+ HRELVFGFF AS +LRANGEVHV+HK PF+
Sbjct: 104 RRFDRVIFNFPHAGFHGRESDSSLIRKHRELVFGFFNGASRLLRANGEVHVSHKNKAPFS 163
Query: 62 TWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKFIYNPKAR 121
WN+E+LA + FL LI+ F+K +YPGY NKRGD RCD+PF LG CSTFKF ++ A+
Sbjct: 164 EWNLEELASRCFLVLIQRVAFEKNNYPGYENKRGDGRRCDQPFLLGECSTFKFRFSRVAK 223
Query: 122 LAFQE 126
+ E
Sbjct: 224 ELYAE 228
>AT4G26485.1 | Symbols: | Domain of unknown function (DUF2431) |
chr4:13377685-13378390 REVERSE LENGTH=171
Length = 171
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
Query: 1 MRRFDRVIFNFPHAG--FHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTT 58
++R+DR++FNFPHAG F +E +S I+ H+ELV GF +NA ML +GE+H+ HKTT
Sbjct: 52 LQRYDRIVFNFPHAGSRFFGRELSSRAIESHKELVRGFLENAKEMLEEDGEIHITHKTTY 111
Query: 59 PFNTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGD-SYRCDEPFPLGMCSTFKF 114
PF+ W I+KL L L++ S F+ YPGY KRG R D+ FP+G CST+ F
Sbjct: 112 PFSDWGIKKLGKGEGLKLLKKSKFELSHYPGYITKRGSGGRRSDDYFPVGECSTYMF 168
>AT5G56060.1 | Symbols: | Domain of unknown function (DUF2431) |
chr5:22704008-22704892 FORWARD LENGTH=220
Length = 220
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 1 MRRFDRVIFNFPHAGF-HRKEDNSLMIKMHRELVFGFFKNASCMLR-ANGEVHVNHKTTT 58
+ R+DR+IFNFPH+G E + I +H+ LV GF ++A ML+ +GE+HV HKTT
Sbjct: 89 LGRYDRIIFNFPHSGLGFGSEHDIFFIMLHQGLVRGFLESARKMLKDEDGEIHVTHKTTD 148
Query: 59 PFNTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPL 106
PFN W IE LA + L LI +F K +PGY+NK+G C+ F L
Sbjct: 149 PFNRWGIETLAGEKGLRLIGEIEFHKWAFPGYSNKKGGGSNCNSTFLL 196
>AT1G55800.1 | Symbols: | Domain of unknown function (DUF2431) |
chr1:20856922-20858235 REVERSE LENGTH=314
Length = 314
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 69/135 (51%), Gaps = 33/135 (24%)
Query: 2 RRFDRVIFNFPHAGFHRKEDNSLMIK----MHRELVFGFFKNASCMLRANGEVHVNHKTT 57
RRFDRVIFNFPH GFHRKE + I+ R L F AS MLRA+GE+
Sbjct: 129 RRFDRVIFNFPHTGFHRKESDPCQIQPAAATLRNLFKDFLHGASHMLRADGELEA----- 183
Query: 58 TPFNTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKFIYN 117
F+K +YPGY NKRGD RCD+PF LG CSTFKF ++
Sbjct: 184 ------------------------FEKRNYPGYENKRGDGSRCDQPFLLGECSTFKFRFS 219
Query: 118 PKARLAFQEIQDAVE 132
A+ + E VE
Sbjct: 220 RVAKELYAEKVKEVE 234
>AT5G56075.1 | Symbols: | Domain of unknown function (DUF2431) |
chr5:22709756-22710809 FORWARD LENGTH=256
Length = 256
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
Query: 4 FDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLR---ANGEVHVNHKTTTPF 60
+DRVIFNFP ELV GF K+A +++ GE+HV HKT PF
Sbjct: 153 YDRVIFNFPT----------------HELVRGFMKSARVLVKDEDKGGEIHVIHKTEYPF 196
Query: 61 NTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
+ W ++ L + L LI +F YPGY NKRG D FP+G STF F
Sbjct: 197 SEWKLKTLGEKEGLDLIREVEFCLSHYPGYFNKRGSGGYSDSSFPVGKSSTFMF 250
>AT5G25030.1 | Symbols: | Domain of unknown function (DUF2431) |
chr5:8620083-8620991 REVERSE LENGTH=193
Length = 193
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 4 FDRVIFNFPHAGFHRKEDNSLMIKMHRELVFG-FFKNASCMLR-ANGEVHVNHKTTTPFN 61
+D +IFNFPHAG R VFG F ++A M++ +GE+H+ T PFN
Sbjct: 92 YDIIIFNFPHAG-------------KRNKVFGGFMESAREMMKDEDGEIHITLNTLNPFN 138
Query: 62 TWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
W+++ LA ++ L LI+ F K +P +NKR CD +P+G T+ F
Sbjct: 139 KWDLKALAEESGLRLIQRMQFIKWAFPSSSNKRESGSNCDFIYPIGSAITYMF 191