Miyakogusa Predicted Gene

Lj5g3v0405030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0405030.1 tr|G7I9X4|G7I9X4_MEDTR Delta-6-desaturase
OS=Medicago truncatula GN=MTR_1g016070 PE=4 SV=1,82.66,0,SUBFAMILY NOT
NAMED,NULL; FATTY ACID DESATURASE 2,NULL; seg,NULL;
FA_desaturase,Fatty acid
desaturas,NODE_41889_length_1550_cov_146.452255.path2.1
         (346 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61580.1 | Symbols:  | Fatty acid/sphingolipid desaturase | c...   483   e-137
AT2G46210.1 | Symbols:  | Fatty acid/sphingolipid desaturase | c...   479   e-135

>AT3G61580.1 | Symbols:  | Fatty acid/sphingolipid desaturase |
           chr3:22786253-22787602 FORWARD LENGTH=449
          Length = 449

 Score =  483 bits (1243), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 225/346 (65%), Positives = 272/346 (78%)

Query: 1   MGLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSG 60
           +GLF+ K H  L +L  +A +F   + GVL   S + H   AAL+G  WIQS +IGHDSG
Sbjct: 104 LGLFENKGHVTLYTLAFVAAMFLGVLYGVLACTSVFAHQIAAALLGLLWIQSAYIGHDSG 163

Query: 61  HYQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPXXXXXX 120
           HY IM N+ +NRF Q+LSGNCLTGISI WWKW HNAHH+ACNSLD+DPDLQH+P      
Sbjct: 164 HYVIMSNKSYNRFAQLLSGNCLTGISIAWWKWTHNAHHLACNSLDYDPDLQHIPVFAVST 223

Query: 121 XXXXXXXXXXYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLSKRKVPNR 180
                     Y+RK+ FDPVARFLVSYQH +YYPVMCF RINLF Q+F+LL SKR+VP+R
Sbjct: 224 KFFSSLTSRFYDRKLTFDPVARFLVSYQHFTYYPVMCFGRINLFIQTFLLLFSKREVPDR 283

Query: 181 WVELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPPT 240
            +  +G+LVFW W+PLLVSCLPNW ER  FV  SF+VT +QH+QFTLNHF+A VYVGPPT
Sbjct: 284 ALNFAGILVFWTWFPLLVSCLPNWPERFFFVFTSFTVTALQHIQFTLNHFAADVYVGPPT 343

Query: 241 AHDWFEKQTHGTLDVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKDLCKKHN 300
             DWFEKQ  GT+D+SC  +MDWF GGLQFQ+EHHLFPRLPRCHLRK+SP+V++LCKKHN
Sbjct: 344 GSDWFEKQAAGTIDISCRSYMDWFFGGLQFQLEHHLFPRLPRCHLRKVSPVVQELCKKHN 403

Query: 301 LPYNCVSFWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTHG 346
           LPY  +S+++ANVLT+ TL+ AA QARD++NPV KNLVWEA+NTHG
Sbjct: 404 LPYRSMSWFEANVLTINTLKTAAYQARDVANPVVKNLVWEALNTHG 449


>AT2G46210.1 | Symbols:  | Fatty acid/sphingolipid desaturase |
           chr2:18977542-18978891 FORWARD LENGTH=449
          Length = 449

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 221/345 (64%), Positives = 266/345 (77%)

Query: 2   GLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSGH 61
           GLFDKK H  L +L  + V+  A + GVL   S W H+  A L+G  WIQS ++GHDSGH
Sbjct: 105 GLFDKKGHVTLYTLTCVGVMLAAVLYGVLACTSIWAHLISAVLLGLLWIQSAYVGHDSGH 164

Query: 62  YQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPXXXXXXX 121
           Y +   +  N+ +Q+LSGNCLTGISI WWKW HNAHHIACNSLD DPDLQH+P       
Sbjct: 165 YTVTSTKPCNKLIQLLSGNCLTGISIAWWKWTHNAHHIACNSLDHDPDLQHIPIFAVSTK 224

Query: 122 XXXXXXXXXYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLSKRKVPNRW 181
                    Y RK+ FDP+ARFL+SYQH ++YPVMC  RINLF Q+F+LL SKR VP+R 
Sbjct: 225 FFNSMTSRFYGRKLTFDPLARFLISYQHWTFYPVMCVGRINLFIQTFLLLFSKRHVPDRA 284

Query: 182 VELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPPTA 241
           + ++G+LVFW W+PLLVS LPNW ER +FV VSF+VT IQHVQF LNHF+A VY GPP  
Sbjct: 285 LNIAGILVFWTWFPLLVSFLPNWQERFIFVFVSFAVTAIQHVQFCLNHFAADVYTGPPNG 344

Query: 242 HDWFEKQTHGTLDVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKDLCKKHNL 301
           +DWFEKQT GTLD+SC  +MDWF GGLQFQ+EHHLFPRLPRCHLR +SP+VK+LCKKHNL
Sbjct: 345 NDWFEKQTAGTLDISCRSFMDWFFGGLQFQLEHHLFPRLPRCHLRTVSPVVKELCKKHNL 404

Query: 302 PYNCVSFWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTHG 346
           PY  +S+W+ANV T+RTL+NAA+QARD +NPV KNL+WEAVNTHG
Sbjct: 405 PYRSLSWWEANVWTIRTLKNAAIQARDATNPVLKNLLWEAVNTHG 449