Miyakogusa Predicted Gene

Lj5g3v0404930.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0404930.2 tr|G7K4U8|G7K4U8_MEDTR Cytochrome c oxidase
assembly protein COX15-like protein OS=Medicago
truncatu,85.43,0,CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15,NULL;
seg,NULL; HemeA_synth_type2,Heme A synthase, type ,CUFF.52959.2
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56090.1 | Symbols: COX15 | cytochrome c oxidase 15 | chr5:22...   611   e-175

>AT5G56090.1 | Symbols: COX15 | cytochrome c oxidase 15 |
           chr5:22714634-22716605 FORWARD LENGTH=457
          Length = 457

 Score =  611 bits (1575), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 315/451 (69%), Positives = 352/451 (78%), Gaps = 6/451 (1%)

Query: 9   SILKRSREAAIHKLRGTTT---RPF-SHPSAQESFKFLSPSIASHGFRAFRSLPIPKGHH 64
           S LKR++EA     RG TT   R F S+ +A       S  +A + F   RSL   KG +
Sbjct: 7   SALKRNKEAFNGIARGFTTSSHRVFTSNITAASVTSASSSPLAGNSFYGLRSLL--KGQN 64

Query: 65  VSYTRSFSKVVSAGAEHKEGLKLFVTGGAHAQKVVGIWLFGSAAWVFSMVXXXXXXXXXX 124
            S  R  S V S  +E KEGLKL VTGG  AQK VGIWLFGSAAWVFSMV          
Sbjct: 65  ASMFRRMSTVASISSESKEGLKLLVTGGPQAQKWVGIWLFGSAAWVFSMVVLGGVTRLTR 124

Query: 125 XXXXMTDWKFTGGLPPLSDEEWLQEFEKYKQSPEYKRVNKGMTIEEFKFIYWMEYAHRMW 184
               MTDWKFTG  PPLSDE W +EFEKYKQSPEYKRVNKGM +E+FKFIYWMEYAHRMW
Sbjct: 125 SGLSMTDWKFTGEFPPLSDEAWAKEFEKYKQSPEYKRVNKGMNLEDFKFIYWMEYAHRMW 184

Query: 185 GRALGVIFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPTEYSQ 244
           GR LG++FALP+SYFL KGYITLRLG++LS LFALGAGQG IGWWMVKSGLEEPP+EYSQ
Sbjct: 185 GRGLGIMFALPFSYFLRKGYITLRLGVQLSGLFALGAGQGFIGWWMVKSGLEEPPSEYSQ 244

Query: 245 PRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESVTWVREAAKVRRLALPVSLLVG 304
           PRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAES+ WVR AAKV++LALPVSL+VG
Sbjct: 245 PRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVRGAAKVKKLALPVSLIVG 304

Query: 305 LTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTVQLDHRILATA 364
           +TA+SGAFVAGNDAG AFNTFPKMGDTWIP++IFEMKPL+RNFFENT+TVQLDHR+LAT 
Sbjct: 305 ITAISGAFVAGNDAGRAFNTFPKMGDTWIPDNIFEMKPLLRNFFENTATVQLDHRLLATT 364

Query: 365 TLISVGALWGATRKLDIHPAVRSLIGSIVGMAALQVTLGVSTLLSYVPVSLGTAHQAGAX 424
           TLI++G +W  TRKLDIHPAV++LIGS VGM A+QVTLGVSTLLSYVPVSLG+AHQAGA 
Sbjct: 365 TLIAIGTMWWFTRKLDIHPAVKALIGSTVGMTAVQVTLGVSTLLSYVPVSLGSAHQAGAL 424

Query: 425 XXXXXXXXXNHTVRXXXXXXXXXXXQVVKAN 455
                    NHT+R           QV K+N
Sbjct: 425 TLLTLMLLLNHTLRRPSPSLLKSLPQVAKSN 455