Miyakogusa Predicted Gene

Lj5g3v0391520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0391520.1 Non Chatacterized Hit- tr|D8L9Q6|D8L9Q6_WHEAT
Putative uncharacterized protein OS=Triticum aestivum
,30.57,0.0000000000002,seg,NULL,CUFF.52917.1
         (304 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11810.1 | Symbols:  | unknown protein; Has 1807 Blast hits t...   244   4e-65

>AT5G11810.1 | Symbols:  | unknown protein; Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:3808739-3810440 FORWARD LENGTH=306
          Length = 306

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/309 (43%), Positives = 181/309 (58%), Gaps = 8/309 (2%)

Query: 1   MADKPSRSLVLFGDGLARSIDPXXXXXXXXXXXXXCGFXXXXXXXXXXXXDQRTVREFAV 60
           MADK SRSL+L+GDGLAR +DP             CGF            ++R VREF+ 
Sbjct: 1   MADKSSRSLILYGDGLARFVDPSNTNIHSLASVATCGFLSLPNAPPETE-NERIVREFSH 59

Query: 61  LLDAPXXXXXXXXXXXXKDSPEKQTLPDRFMGMKAAILTNHSGLKSFSSKLGFNVLQLDA 120
           LLDA              +  +  TL +RFMG+KAA++T+ S L SF   +G +VLQL  
Sbjct: 60  LLDASEAYSIASGLKPKGNGNDISTLAERFMGLKAALVTDSSTLTSFGKLIGLDVLQLSE 119

Query: 121 LAKDYDAGLHENDVVALELLKLLGFQEGKVQDSNNFDLVFFHIGAGE----KNVEYINAL 176
           + ++ D+    +D  + +LLKLLGF+ GK  D N +DLVF H G  E     N+  +++L
Sbjct: 120 ICQESDS--FPSDATSSKLLKLLGFEGGKCLDVNLYDLVFVHFGVDEYNNGNNMGILDSL 177

Query: 177 VGGLMNQAQPGSDISSRLHLSLVMSYGKVSEDDESKFSV-SKRADEKXXXXXXXXXXXXA 235
           +G +M  AQPGS+I SRLHLS+V+SYG V++ D S F + + + D               
Sbjct: 178 IGSIMGMAQPGSEILSRLHLSVVLSYGSVTDKDVSVFPIKTPQEDINPAFIGLVPRQSYT 237

Query: 236 MKGGFPRKDVRLHSPLLIAQWQDAVTRKDNAERFYFQDFMEHGGNLTIPADRFLHEIAFK 295
           M+G   R DVR + P+L+AQWQ  VTRKD  +   F+   +  GNL IPADRF+HE+AFK
Sbjct: 238 MRGEKTRDDVRHYCPMLVAQWQHGVTRKDLVDTLSFEALKKLCGNLVIPADRFIHEVAFK 297

Query: 296 LWKAPKYGA 304
           LWKAPKYGA
Sbjct: 298 LWKAPKYGA 306