Miyakogusa Predicted Gene

Lj5g3v0391500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0391500.1 CUFF.52935.1
         (500 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52980.1 | Symbols:  | GTP-binding family protein | chr1:1973...   798   0.0  
AT3G07050.1 | Symbols:  | GTP-binding family protein | chr3:2229...   208   6e-54
AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosph...   137   2e-32
AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosph...   133   4e-31
AT4G02790.1 | Symbols:  | GTP-binding family protein | chr4:1247...    86   6e-17
AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosph...    50   4e-06

>AT1G52980.1 | Symbols:  | GTP-binding family protein |
           chr1:19737493-19740201 FORWARD LENGTH=576
          Length = 576

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/501 (78%), Positives = 449/501 (89%), Gaps = 4/501 (0%)

Query: 4   KKERKVNVSGKPKHSLDVNRSNDATKK-EVRSAATVRRLKMYKSRPVRDKGGKILSHELQ 62
           KKE+K NVSGKPKHSLD NR++   K  E RS +TV RLKMYK+RP R+ GGKILS+E Q
Sbjct: 3   KKEKKANVSGKPKHSLDANRADGKKKTTETRSKSTVNRLKMYKTRPKRNAGGKILSNEYQ 62

Query: 63  SKELPSTRIQPDRRWFANTRVVNQKELEFFREELQTRMSSNYNVILQEKKLPLSLLNDHQ 122
           SKELP++RI PDRRWF NTRVVNQKELE+FREELQT+MSSNYNVIL+E+KLP+SLL D++
Sbjct: 63  SKELPNSRIAPDRRWFGNTRVVNQKELEYFREELQTKMSSNYNVILKERKLPMSLLTDNK 122

Query: 123 KQSRVHLLDRQPFTDAFGPKTKRKRPGLLASDYESLAKKADDSHEAFEEK-YGSSGTAEA 181
           KQSRVHLLD +PF DAFG KTKRKRP L+ASDYE+L KKA +S +AFEEK          
Sbjct: 123 KQSRVHLLDMEPFQDAFGRKTKRKRPKLVASDYEALVKKAAESQDAFEEKNGAGPSGEGG 182

Query: 182 DEADGFRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKE 241
           +E DGFRDLVRH MFEKGQSKRIWGELYKVIDSSDV+VQV+DARDPQGTRC+HLEK LKE
Sbjct: 183 EEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKE 242

Query: 242 NCKYKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFAR 301
           + K+KHM+LLLNKCDL+PAWATKGWLRVLSKEYPTLAFHAS+NKSFGKGSLLSVLRQFAR
Sbjct: 243 HHKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASVNKSFGKGSLLSVLRQFAR 302

Query: 302 LKTDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCP 361
           LK+DKQAISVGF+GYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCP
Sbjct: 303 LKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCP 362

Query: 362 GVVYQNKDTETDVVLKGVVRVTNLKDAADHIGEVLKRVKLEHLQRAYRIQEWVDENDFLL 421
           GVVYQ++DTETD+VLKGVVRVTNL+DA++HIGEVL+RVK EHLQRAY+I++W D++DFLL
Sbjct: 363 GVVYQSRDTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDDHDFLL 422

Query: 422 QLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRLDDLSEEPN--VNGIDVAD 479
           QLCKS+GKLLKGGEPDLMT AKM+LHDWQRG+IPFFVPPP+LD+++ E    V GID   
Sbjct: 423 QLCKSSGKLLKGGEPDLMTGAKMILHDWQRGRIPFFVPPPKLDNVASESEVIVPGIDKEA 482

Query: 480 GVDSNQASAAIKAIANVLSSQ 500
             D++QA+AA+KAIA ++S+Q
Sbjct: 483 IADNSQAAAALKAIAGIMSTQ 503


>AT3G07050.1 | Symbols:  | GTP-binding family protein |
           chr3:2229602-2232279 REVERSE LENGTH=582
          Length = 582

 Score =  208 bits (530), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 168/306 (54%), Gaps = 24/306 (7%)

Query: 183 EADGFRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKEN 242
           E +   DL +         +  + EL KVI+ SDV+++VLDARDP GTRC  +E+ + + 
Sbjct: 105 EGETIEDLPKVVNVRDNSERAFYKELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQA 164

Query: 243 CKYKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINK----------------- 285
              KH+VLLLNK DL+P  A + WL  L +E+P +AF  S  +                 
Sbjct: 165 GPNKHLVLLLNKIDLVPREAAEKWLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSN 224

Query: 286 ------SFGKGSLLSVLRQFARLKTDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPI 339
                   G  +L+ +L+ ++R    K++I+VG IG PNVGKSS+IN+L+  +V  V   
Sbjct: 225 MLQTSDCLGADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGAT 284

Query: 340 PGETKVWQYITLTKRIFLIDCPGVVY-QNKDTETDVVLKGVVRVTNLKDAADHIGEVLKR 398
           PG T+  Q + L K + L+DCPGVV  ++   +  + L+   R+  L D    + E+LK 
Sbjct: 285 PGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKL 344

Query: 399 VKLEHLQRAYRIQEWVDENDFLLQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFV 458
              + L   Y+I  +   +DFL ++    GKL KGG  D+  AA++VLHDW  GKIP++ 
Sbjct: 345 CPKDMLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYT 404

Query: 459 PPPRLD 464
            PP+ D
Sbjct: 405 MPPKRD 410


>AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:11625449-11627959
           FORWARD LENGTH=537
          Length = 537

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 160/330 (48%), Gaps = 59/330 (17%)

Query: 196 FEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKC 255
           FEK     IW +L++V++ SD++V V+DARDP   RC  LE + +E  ++K  +LL+NK 
Sbjct: 151 FEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKA 208

Query: 256 DLIPAWATKGWLRVLSKEYPTLAFHAS----------------------------INKSF 287
           DL+P++  + W    S+      F ++                              K +
Sbjct: 209 DLLPSYVREKWAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVY 268

Query: 288 GKGSLLSVLR----QFARLKTDK-----------QAISVGFIGYPNVGKSSVINTLRTKN 332
           G+  LL  L+    +  +++  +           + + VGF+GYPNVGKSS IN L  + 
Sbjct: 269 GRDDLLDRLKLEALEIVKMRKSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVGQK 328

Query: 333 VCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQN-KDTETDVVLKGVV---RVTNLKDA 388
              V   PG+TK +Q + +++ + L DCPG+V+ +   +  ++V  GV+   R+T   +A
Sbjct: 329 RTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHLEA 388

Query: 389 ADHIGEVLKRVKLEHL-------QRAYRIQEWVD-ENDFLLQLCKSTGKLLKGGEPDLMT 440
              + E++ R  +E +        ++Y  Q      ++ L   C S G +   G PD   
Sbjct: 389 IKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDETR 448

Query: 441 AAKMVLHDWQRGKIPFFVPPPRL--DDLSE 468
           AA+ +L D+  GK+P F  PP +  DD +E
Sbjct: 449 AARQILKDYIEGKLPHFAMPPEITRDDENE 478


>AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2646307-2649106
           FORWARD LENGTH=589
          Length = 589

 Score =  133 bits (334), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 66/357 (18%)

Query: 196 FEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKC 255
           FEK     IW +L++V++ SD++V V+DARDP   RC  LE + +E  ++K ++LL+NK 
Sbjct: 151 FEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKA 208

Query: 256 DLIPAWATKGWLRVLSKEYPTLAFHASINKS----------------------------F 287
           DL+P    + W            F ++I  +                            +
Sbjct: 209 DLLPTDVREKWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIMIY 268

Query: 288 GKGSLLSVLR----QFARLKTDKQA---------------ISVGFIGYPNVGKSSVINTL 328
           G+  LLS L+    +  +++  + A                 VGF+GYPNVGKSS IN L
Sbjct: 269 GRDELLSRLQFEAQEIVKVRNSRAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTINAL 328

Query: 329 RTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQN-KDTETDVVLKGVVRVTNLKD 387
             +    V   PG+TK +Q + ++  + L DCPG+V+ +   +  +++  GV+ +  + +
Sbjct: 329 VGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTE 388

Query: 388 AADHIGEVLKRVKLEHLQRAYRI-----------QEWVDENDFLLQLCKSTGKLLKGGEP 436
             + I  V  +V    ++  Y I                  + L   C S G +   G P
Sbjct: 389 HREAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKSYCASRGYVASSGLP 448

Query: 437 DLMTAAKMVLHDWQRGKIPFFVPPPRLDDLSEEPNVNGI----DVADGVDSNQASAA 489
           D   AA+++L D+  GK+P +  PP +   ++EP++       D+ +G +S+ ++  
Sbjct: 449 DETKAARLILKDYIGGKLPHYAMPPGMPQ-ADEPDIEDTQELEDILEGSESDDSAVG 504


>AT4G02790.1 | Symbols:  | GTP-binding family protein |
           chr4:1247416-1249351 FORWARD LENGTH=372
          Length = 372

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 32/269 (11%)

Query: 207 ELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKCDLIPAWATKGW 266
           EL + +   DVV++V DAR P  T    ++  L      +  +L+LN+ D+I       W
Sbjct: 109 ELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGN----RKRILVLNREDMISNDDRNDW 164

Query: 267 LRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKTD-----------KQAISVGFIG 315
            R  +K+   + F    N   G G++  + R    L  D            +++  G IG
Sbjct: 165 ARYFAKQGIKVIF---TNGKLGMGAM-KLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIG 220

Query: 316 YPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNKDTETDVV 375
           YPNVGKSS+IN L  + +C  AP PG T+  +++ L K + L+D PG++    D +   +
Sbjct: 221 YPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAI 280

Query: 376 LKGVV-----RVTNLKDAADHIGEVLKR---VKLEHLQRAYRIQEWVDENDFLLQLCKST 427
              +      +  +  D A  + ++L R   V  + L   Y+IQ    E +   +  K+ 
Sbjct: 281 KLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQL---EGNCGKKFVKTL 337

Query: 428 GKLLKGGEPDLMTAAKMVLHDWQRGKIPF 456
           G  L GG  D   AA  +L D+++GK  +
Sbjct: 338 GLNLFGG--DSHQAAFRILTDFRKGKFGY 364


>AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:17374118-17376177
           FORWARD LENGTH=386
          Length = 386

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 22/178 (12%)

Query: 215 SDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKCDLIPAWATKGWLRVL-SKE 273
           SD+V++V DAR P  +      + L+     K  ++ LNK DL        W R   S +
Sbjct: 47  SDLVIEVRDARIPLSSA----NEDLQSQMSAKRRIIALNKKDLANPNVLNKWTRHFESSK 102

Query: 274 YPTLAFHASINKSFGKGSLLSVLR-QFARLKTDKQAISVGFIGYPNVGKSSVINTLRTKN 332
              +A +A    S  K  LL ++  +   +   +  + V  +G PNVGKS++IN++    
Sbjct: 103 QDCIAINAHSRSSVMK--LLDLVELKLKEVIAREPTLLVMVVGVPNVGKSALINSIHQIA 160

Query: 333 VCK-----------VAPIPGETKVWQYITLTKR--IFLIDCPGVVYQN-KDTETDVVL 376
             +           V P+PG T+      +  R  I+++D PGV+  +  D ET + L
Sbjct: 161 AARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSIYVLDSPGVLVPSIPDIETGLKL 218