Miyakogusa Predicted Gene

Lj5g3v0380110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0380110.1 Non Chatacterized Hit- tr|G7KI37|G7KI37_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,29.92,0.000000000002,seg,NULL,CUFF.52897.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11780.1 | Symbols:  | unknown protein; Has 37 Blast hits to ...   153   1e-37

>AT5G11780.1 | Symbols:  | unknown protein; Has 37 Blast hits to 37
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr5:3793928-3795983 FORWARD LENGTH=504
          Length = 504

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 135/240 (56%), Gaps = 8/240 (3%)

Query: 16  QPMLKESINRFLAEYRRGATDFGDFSSIFSRILHSTPDPP-IQLVWFYSALEFHTNKLGP 74
           +P+L +SI + L +YR G T+F DF SIF+RIL+  P+PP ++LVWFYSA+ F+++KL  
Sbjct: 18  KPLLNDSIKQLLLQYRGGRTNFSDFDSIFTRILNDLPEPPPLELVWFYSAIRFYSSKLAF 77

Query: 75  AADESSRRVSVAKGLFQLLVSCSGCCGSMKRIGVLAPLVFELCXXXXXXXXXXXXXXXXX 134
             D     V +    FQL+VS S     +K++ +L+P+V++L                  
Sbjct: 78  RDDS----VRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQLSRLVISRRRDALSLLEGI 133

Query: 135 XSYCSILWGDVV-HSDNGVAILEP-DFVDLMPVWMVDRDGSCGVVGDCVKGFFPLASDGI 192
            SY S+   D   + D+ V ++    F DL  VW+VD       V DC++ F P AS+ +
Sbjct: 134 VSYISMYCVDEPGNEDDDVLMVSGFSFADLSRVWVVDEVEDNCRVEDCLEVFMPFASEIL 193

Query: 193 RKGIE-MGCDVGSLAGIVMCEALLLKMCFAFDSGMAREELEKKLHASAVQTITGFRNSYF 251
           RK I+   C VG LAGIV  +  LL +C  FD  + R EL+K L  S +Q I+GF + +F
Sbjct: 194 RKEIDSESCGVGYLAGIVASQVFLLSLCSRFDLDLGRSELDKDLQESVLQMISGFHSCFF 253